EWM24888.1, cds5768 (CDS) Nannochloropsis gaditana

Overview
NameEWM24888.1
Unique Namecds5768
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:833478..834602 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24888.1
ProductHistone methylation DOT1
Orig transcript idgnl|cribi|Naga_100116g17.9016.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:833478..834602 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0007049cell cycle
GO:0006464cellular protein modification process
GO:0016043cellular component organization
GO:0034729histone H3-K79 methylation
GO:0051726regulation of cell cycle
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0031151histone methyltransferase activity (H3-K79 specific)
GO:0018024histone-lysine N-methyltransferase activity
Vocabulary: INTERPRO
TermDefinition
IPR030445H3-K79_meTrfase
IPR029063SAM-dependent_MTases
IPR013110DOT1_dom_Pfam
Homology
BLAST of EWM24888.1 vs. NCBI_GenBank
Match: gi|585106515|gb|EWM24888.1| (Histone methylation DOT1 [Nannochloropsis gaditana])

HSP 1 Score: 782.326 bits (2019), Expect = 0.000e+0
Identity = 374/374 (100.00%), Postives = 374/374 (100.00%), Query Frame = 0
Query:    1 MSFLGVPKCTPMKNHNTQLLILSNPFLFLKPHTYPIAWVGIAATMGRGEPPPSFSLHLALVAVAFLQTFSPINAFCQTLTRQKYVLHRAILMHASVVECVEDAEAYMAAYLYPDRDAEARKSLAFQAQDTFFLEHEKHAAKDLVLTKKYTTYGEFPLASLHAILQTLDLGPKDVFLDLGSGSGRLVLGTALLFPYIKASVGIEVVPEMHAIATEAARRAVGIGDLPKMSPFHFVQGNAETGEYATKEQVNDGEEMRKNEEGAYKMHPLREATVIFMYCTTWRSQDGLYLAQPLQTSLLKNVRSDVTIITTDKCFADGWEGVEKGGEESEKEGRRGFRVVRRMAVPNPEVWESIAHIHEVMDSKDGGNGTESNER 374
            MSFLGVPKCTPMKNHNTQLLILSNPFLFLKPHTYPIAWVGIAATMGRGEPPPSFSLHLALVAVAFLQTFSPINAFCQTLTRQKYVLHRAILMHASVVECVEDAEAYMAAYLYPDRDAEARKSLAFQAQDTFFLEHEKHAAKDLVLTKKYTTYGEFPLASLHAILQTLDLGPKDVFLDLGSGSGRLVLGTALLFPYIKASVGIEVVPEMHAIATEAARRAVGIGDLPKMSPFHFVQGNAETGEYATKEQVNDGEEMRKNEEGAYKMHPLREATVIFMYCTTWRSQDGLYLAQPLQTSLLKNVRSDVTIITTDKCFADGWEGVEKGGEESEKEGRRGFRVVRRMAVPNPEVWESIAHIHEVMDSKDGGNGTESNER
Sbjct:    1 MSFLGVPKCTPMKNHNTQLLILSNPFLFLKPHTYPIAWVGIAATMGRGEPPPSFSLHLALVAVAFLQTFSPINAFCQTLTRQKYVLHRAILMHASVVECVEDAEAYMAAYLYPDRDAEARKSLAFQAQDTFFLEHEKHAAKDLVLTKKYTTYGEFPLASLHAILQTLDLGPKDVFLDLGSGSGRLVLGTALLFPYIKASVGIEVVPEMHAIATEAARRAVGIGDLPKMSPFHFVQGNAETGEYATKEQVNDGEEMRKNEEGAYKMHPLREATVIFMYCTTWRSQDGLYLAQPLQTSLLKNVRSDVTIITTDKCFADGWEGVEKGGEESEKEGRRGFRVVRRMAVPNPEVWESIAHIHEVMDSKDGGNGTESNER 374          
BLAST of EWM24888.1 vs. NCBI_GenBank
Match: gi|551590597|ref|XP_005779663.1| (hypothetical protein EMIHUDRAFT_205230 [Emiliania huxleyi CCMP1516] >gi|485632183|gb|EOD27234.1| hypothetical protein EMIHUDRAFT_205230 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 80.8777 bits (198), Expect = 6.230e-14
Identity = 66/225 (29.33%), Postives = 102/225 (45.33%), Query Frame = 0
Query:  149 YTTYGEFPLASLHAILQTLDLGPK-----DVFLDLGSGSGRLVLGTALLFPYIKASVGIEVVPEMHAIATEAARRAVGIGDLPKMSPFHFVQGNAETGEYATKEQVNDGEEMRKNEEGAYKMHPLREATVIFMYCTTWRSQDGLY--LAQPLQTSLLKNVRSDVTIITTDKCFADGWEGVEKGGEESEKEGRRGFRVVRRMAVPNPEVWESIAHIHEVMDSKDGG 366
            + TYGEF LA   A++      P      + F+D+GSG GRLVL  + ++P +  + G+E   ++H +A  A  RA     LP+     FV G+A                ++   EG     PL +ATV+F Y + W S+ G     ++ +    L   R    ++ TDK     W  +E  G   E      F ++  M  PN E   S+ +I+EV+ S+ GG
Sbjct:   53 HLTYGEFDLAFFGALVDRALARPAGRREPETFVDVGSGCGRLVLAASCVWPELARAAGVETCADLHMMAVRAQARA----SLPRC---DFVHGDA----------------LQAMREGG----PLDDATVVFCYSSAWASEGGALTDFSELVGCCCLPGCR----VVVTDK-----W--LECDGSCGE------FALIDEMEGPNRETGGSVGYIYEVVRSQRGG 233          
BLAST of EWM24888.1 vs. NCBI_GenBank
Match: gi|551575709|ref|XP_005773563.1| (hypothetical protein EMIHUDRAFT_241601 [Emiliania huxleyi CCMP1516] >gi|485625202|gb|EOD21134.1| hypothetical protein EMIHUDRAFT_241601 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 71.633 bits (174), Expect = 1.231e-10
Identity = 61/217 (28.11%), Postives = 96/217 (44.24%), Query Frame = 0
Query:  149 YTTYGEFPLASLHAILQTLDLGPK-----DVFLDLGSGSGRLVLGTALLFPYIKASVGIEVVPEMHAIATEAARRAVGIGDLPKMSPFHFVQGNAETGEYATKEQVNDGEEMRKNEEGAYKMHPLREATVIFMYCTTWRSQDGLY--LAQPLQTSLLKNVRSDVTIITTDKCFADGWEGVEKGGEESEKEGRRGFRVVRRMAVPNPEVWESIAHIHE 358
            + TYGEF LA   A++      P      + F+D+GSG GRLVL  + ++P +  + G+E   ++H +A  A  RA     LP+     FV G+A                ++   EG     PL +ATV+F Y + W S+ G     ++ +    L   R    ++ TDK     W  +E  G   E      F ++  +  PN E   S+ +I+E
Sbjct:   53 HLTYGEFDLAFFGALVDRALARPAGRREPETFVDVGSGCGRLVLAASCVWPELARAAGVETCADLHMMAVRAQARA----SLPRCD---FVHGDA----------------LQAMREGG----PLDDATVVFCYSSAWASEGGALTDFSELVGCCCLPGCR----VVVTDK-----W--LECDGSCGE------FALIDEVEGPNRETGGSVGYIYE 225          
BLAST of EWM24888.1 vs. NCBI_GenBank
Match: gi|1210518083|dbj|GAX23014.1| (hypothetical protein FisN_15Hh088 [Fistulifera solaris])

HSP 1 Score: 70.8626 bits (172), Expect = 3.127e-10
Identity = 77/278 (27.70%), Postives = 110/278 (39.57%), Query Frame = 0
Query:  102 DAEAYMAAYLYPDRDAEARKSLAFQAQ-------DTFFLEHEKHAAKDLVLTKKYTTYGEFPLASLHAILQ-------TLDLGPKDVF--LDLGSGSGRLVLGTALLFPYIKASVGIEVVPEMHAIATEAARRAVGIGDLPKMSPFHFVQGNAETGEYATKEQVNDGEEMRKNEEGAYKMHPLREATVIFMYCTTWRSQ-----DGLYLAQPLQTSLLKNVRSDVTIITTDKCF-ADGWEGVEKGGEESEKEGRRGFRVVRRMAVPNPEVWESIAHIH 357
            +A   +   L+P +D   R +L  +AQ       D   L+            + Y TYGEFPL+SL ++L         L    KD    +DLGSG GRLV    L  P      GIE+ P +H  A  A  RA+  G    + PF     +  +G  +  +   D       E G      L +A ++F Y T W  Q      G  +       L     S+  +ITTD+   A+ W                   ++ R+ VPNPEVW SI ++ 
Sbjct:   27 EAATVINEILFPQQDYGQRIALGRRAQGLSADDNDGSLLQGNDE--------RLYQTYGEFPLSSLDSLLDRAMSINDKLFKNKKDGLKVVDLGSGCGRLVYYLGLSRPNWILH-GIELSPLLHQEALIAQNRALSRG---LLKPFSSSSVSTSSGRISFHQGPAD-------EWG----DVLGKADIVFAYSTAWECQGFSPETGTMILSDEWNQLFSEYCSEALVITTDRSLNANEWT------------------IIDRLEVPNPEVWNSIGYLQ 263          
BLAST of EWM24888.1 vs. NCBI_GenBank
Match: gi|966506414|ref|WP_058523060.1| (hypothetical protein [Legionella birminghamensis] >gi|962188786|gb|KTC73905.1| Histone methylation protein DOT1 [Legionella birminghamensis])

HSP 1 Score: 62.7734 bits (151), Expect = 9.385e-8
Identity = 35/94 (37.23%), Postives = 53/94 (56.38%), Query Frame = 0
Query:  125 FQAQDTFFLEHEKHAAKDLVLTKKYTTYGEFPLASLHAILQTLDLGPKDVFLDLGSGSGRLVLGTALLFPYIKASVGIEVVPEMHAIATEAARR 218
            +Q+   F L  +  A  D   + +Y  YGE    SL A+L   D GP+  F DLGSG+G+ V+ +A++FP +K S GIE+   +H  A +  R+
Sbjct:   46 YQSVSGFHLSKQARADND---SPEYV-YGEIEFQSLIALLSLCDPGPQTCFYDLGSGTGKAVIASAMVFP-VKKSCGIELFESLHNCALQQQRK 134          
BLAST of EWM24888.1 vs. NCBI_GenBank
Match: gi|255086839|ref|XP_002509386.1| (predicted protein [Micromonas commoda] >gi|226524664|gb|ACO70644.1| predicted protein [Micromonas commoda])

HSP 1 Score: 62.3882 bits (150), Expect = 2.215e-7
Identity = 50/166 (30.12%), Postives = 68/166 (40.96%), Query Frame = 0
Query:  151 TYGEFPLASLHAILQTLDLGPKDVFLDLGSGSGRLVLGTALLFPYIKASVGIEVVPEMHAIATEAARRAVGIGDLPKMSPFHFVQGNAETGEYATKEQVNDGEEMRKNEEGAYKMHPLREATVIFMYCTTWRSQDGLYLAQPLQTSLLK--NVRSDVTIITTDKCF 314
            TYGE        + + L +GP DVF DLGSG GR  +   L +  +K +VG+E+  E  A A  A  R    G L        V  N   G Y                         REAT +++ C  W   D  ++AQ L+    +  N+R  VTI   D+ F
Sbjct:  103 TYGELTYEGCTRLGEILAMGPDDVFYDLGSGLGRATIQAHLQWG-VKRAVGVELSAERSAQARRAVERLEQNGQLDHSRRLDLVCANLLEGSY-------------------------REATAVYLCCCCW---DSTFVAQALEVLEKRAVNLRQIVTIEPLDRKF 239          
BLAST of EWM24888.1 vs. NCBI_GenBank
Match: gi|341902213|gb|EGT58148.1| (hypothetical protein CAEBREN_05660 [Caenorhabditis brenneri])

HSP 1 Score: 62.003 bits (149), Expect = 4.008e-7
Identity = 44/130 (33.85%), Postives = 65/130 (50.00%), Query Frame = 0
Query:  151 TYGEFPLASLHAILQTLDLGPKDVFLDLGSGSGRLVLGTALLFPYIKASVGIEVVPEMHAIATEA----ARRAVGIGDLPKMSPFHFVQGNAETGEYATKEQVNDGEEMRKNEEGAYKMHPLREATVIFM 276
            TYGE     + +I + L+LGPKDVFLD+GSG G LV+  +L+ P IK S+GIE++     +A E     +R    IG   +  PF  +  +    +Y                     ++ +R+ATVIFM
Sbjct:  132 TYGEVTPRQMASIFKELELGPKDVFLDIGSGIGNLVMLASLITP-IKRSIGIEILDTPANLAEEQKYWFSRILSHIGK--RHKPFELIHDDCTKTKY---------------------LNEVRQATVIFM 237          
The following BLAST results are available for this feature:
BLAST of EWM24888.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 7
Match NameE-valueIdentityDescription
gi|585106515|gb|EWM24888.1|0.000e+0100.00Histone methylation DOT1 [Nannochloropsis gaditana... [more]
gi|551590597|ref|XP_005779663.1|6.230e-1429.33hypothetical protein EMIHUDRAFT_205230 [Emiliania ... [more]
gi|551575709|ref|XP_005773563.1|1.231e-1028.11hypothetical protein EMIHUDRAFT_241601 [Emiliania ... [more]
gi|1210518083|dbj|GAX23014.1|3.127e-1027.70hypothetical protein FisN_15Hh088 [Fistulifera sol... [more]
gi|966506414|ref|WP_058523060.1|9.385e-837.23hypothetical protein [Legionella birminghamensis] ... [more]
gi|255086839|ref|XP_002509386.1|2.215e-730.12predicted protein [Micromonas commoda] >gi|2265246... [more]
gi|341902213|gb|EGT58148.1|4.008e-733.85hypothetical protein CAEBREN_05660 [Caenorhabditis... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5783rna5783Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications