EWM24914.1, cds5762 (CDS) Nannochloropsis gaditana

BLAST of EWM24914.1 vs. NCBI_GenBank
Match: gi|585106542|gb|EWM24914.1| (light-harvesting protein [Nannochloropsis gaditana])

HSP 1 Score: 403.29 bits (1035), Expect = 3.021e-142
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0

Query:    1 MKFASLLSLLAAPLLASAFLAPAPKTTRARGVVSMVQSKALPFLAAPKKLDGSLVGDFGFDPMGISDQVANLKYVRAAELKHGRVAMLGFLGWVVTQFVHLPGEIYAESNPLKAIAAVPLISHVQIFLFIAAIELATLDRTYTADKPWDLGFDPMNMSKGKSEQQMKDLELKELKNGRLAMIAIIGLMAQTAYTGIPLFS 200
            MKFASLLSLLAAPLLASAFLAPAPKTTRARGVVSMVQSKALPFLAAPKKLDGSLVGDFGFDPMGISDQVANLKYVRAAELKHGRVAMLGFLGWVVTQFVHLPGEIYAESNPLKAIAAVPLISHVQIFLFIAAIELATLDRTYTADKPWDLGFDPMNMSKGKSEQQMKDLELKELKNGRLAMIAIIGLMAQTAYTGIPLFS
Sbjct:    1 MKFASLLSLLAAPLLASAFLAPAPKTTRARGVVSMVQSKALPFLAAPKKLDGSLVGDFGFDPMGISDQVANLKYVRAAELKHGRVAMLGFLGWVVTQFVHLPGEIYAESNPLKAIAAVPLISHVQIFLFIAAIELATLDRTYTADKPWDLGFDPMNMSKGKSEQQMKDLELKELKNGRLAMIAIIGLMAQTAYTGIPLFS 200          

BLAST of EWM24914.1 vs. NCBI_GenBank
Match: gi|546296994|ref|XP_005710084.1| (Light-harvesting complex I polypeptide [Chondrus crispus] >gi|507106108|emb|CDF39790.1| Light-harvesting complex I polypeptide [Chondrus crispus])

HSP 1 Score: 177.563 bits (449), Expect = 4.440e-53
Identity = 100/198 (50.51%), Postives = 132/198 (66.67%), Query Frame = 0

Query:    3 FASLLSLLAAPLLASAFLAPAPKTTRARGVVSMVQSKALPFLAAPKKLDGSLVGDFGFDPMGISDQVANLKYVRAAELKHGRVAMLGFLGWVVTQFVHLPGEIYAESNPLKAIAAVPLISHVQIFLFIAAIELATLDRTYTADKPWDLGFDPMNMSKGKSEQQMKDLELKELKNGRLAMIAIIGLMAQTAYTGIPLFS 200
            F S  +       A+A  AP   +T AR  V+MV S+A+PFL AP KLDGS +GD GFDP+ +SD + +  Y  A ELK+GRVAML  +G +V +FVHLP  ++AE+NP+KAI AVP+   VQI + I  IELAT  +TY +    DLGFDP+ M    S+  M++L+LKELKNGRLAM+A IG + QT  TG P+ +
Sbjct:    4 FVSSFTAFRPSFSAAALSAP---STSARPAVTMVASRAIPFLEAPSKLDGSRIGDSGFDPLYLSDYL-DQDYAAAGELKNGRVAMLATVGMLVQEFVHLPNPMFAEANPIKAIYAVPVEGWVQILVAITIIELATFKKTYESGA--DLGFDPLGMG---SKGNMEELKLKELKNGRLAMLASIGFIFQTITTGKPIIA 192          

BLAST of EWM24914.1 vs. NCBI_GenBank
Match: gi|676395565|ref|XP_009041060.1| (putative plastid light harvesting protein isoform 10 [Aureococcus anophagefferens] >gi|323448307|gb|EGB04207.1| putative plastid light harvesting protein isoform 10 [Aureococcus anophagefferens])

HSP 1 Score: 177.563 bits (449), Expect = 8.126e-53
Identity = 96/211 (45.50%), Postives = 130/211 (61.61%), Query Frame = 0

Query:    5 SLLSLLAAPLLASAFLAPAPKTTRARGVVSMVQSKALPFLAAPKKLDG---------------SLVGDFGFDPMGISDQVANLKYVRAAELKHGRVAMLGFLGWVVTQFVHLPGEIYAESNPLKAIAAVPLISHVQIFLFIAAIELATLDRTYTADKPWDLGFDPMNMSKGKSEQQMKDLELKELKNGRLAMIAIIGLMAQTAYTGIPLFS 200
            +L+SLLA  L A+   AP     RA  + +   S+A PFL  P+KLDG               +++GD GFDP+ +++   +L Y R AE+KHGR+AML  +G++V ++VHLPGE Y  S PLKA   VP  ++ QI L    +ELAT D+TY  D PWDLGFDP+   +GKS+ ++ DL LKEL NGRLAM+A +G+  QT     PL S
Sbjct:    5 ALVSLLA--LKAATGFAPTKPMKRAFSLFAE-NSEAFPFLNRPEKLDGLSVSFMSTRTLILVGTMIGDVGFDPLRLAEVQVDLSYARGAEIKHGRIAMLATVGFLVQEYVHLPGEAYQNSQPLKAPWTVPWAANFQILLLAGCVELATADKTY-GDTPWDLGFDPLCFQEGKSQAELDDLALKELTNGRLAMMAFVGMTVQTLLFDKPLLS 211          

BLAST of EWM24914.1 vs. NCBI_GenBank
Match: gi|545710996|ref|XP_005707805.1| (light-harvesting complex protein [Galdieria sulphuraria] >gi|452824281|gb|EME31285.1| light-harvesting complex protein [Galdieria sulphuraria])

HSP 1 Score: 166.777 bits (421), Expect = 9.679e-49
Identity = 82/161 (50.93%), Postives = 114/161 (70.81%), Query Frame = 0

Query:   36 VQSKALPFLAAPKKLDGSLVGDFGFDPMGISDQVANLKYVRAAELKHGRVAMLGFLGWVVTQFVHLPGEIYAESNPLKAIAAVPLISHVQIFLFIAAIELATLDRTYTADK-PWDLGFDPMNMSKGKSEQQMKDLELKELKNGRLAMIAIIGLMAQTAYTG 195
            V+S+ALPFL APKKLDG + GD GFDP+ ISD + NL Y+RA+E+KH RVAML  LG++  +F HLPG+++ E + L AI  VP+   +QI LFI+ +E+AT   T++ D+ P D GFDP+ ++  KS Q  +  +  E++NGRLAMIA+IG + Q   TG
Sbjct:   39 VKSRALPFLEAPKKLDGKIPGDAGFDPLYISDNM-NLDYLRASEIKHCRVAMLAALGYITQEFFHLPGDVFNEKHALAAIHKVPIEGWIQIILFISLVEIATFRTTFSFDREPGDFGFDPLGLA--KSPQLRRRYQESEIRNGRLAMIAVIGFIVQELVTG 196          

BLAST of EWM24914.1 vs. NCBI_GenBank
Match: gi|676381143|ref|XP_009033850.1| (putative plastid light harvesting protein isoform 8 [Aureococcus anophagefferens] >gi|323455620|gb|EGB11488.1| putative plastid light harvesting protein isoform 8 [Aureococcus anophagefferens])

HSP 1 Score: 166.007 bits (419), Expect = 9.890e-49
Identity = 76/149 (51.01%), Postives = 104/149 (69.80%), Query Frame = 0

Query:   52 GSLVGDFGFDPMGISDQVANLKYVRAAELKHGRVAMLGFLGWVVTQFVHLPGEIYAESNPLKAIAAVPLISHVQIFLFIAAIELATLDRTYTADKPWDLGFDPMNMSKGKSEQQMKDLELKELKNGRLAMIAIIGLMAQTAYTGIPLFS 200
            G+++GD GFDP+ +++   +L Y R AE+KHGR+AML  +G++V ++VHLPGE Y  S PLKA   VP  +++QI L    +ELAT D+TY  D PWDLGFDP+   +GKS+ ++ DL LKEL NGRLAM+A +G+  QT     PL S
Sbjct:   31 GTMIGDVGFDPLRLAEVQVDLSYARGAEIKHGRIAMLATVGFLVQEYVHLPGEAYQNSQPLKAPWTVPWAANLQILLLAGCVELATADKTY-GDTPWDLGFDPLCFQEGKSQAELDDLALKELTNGRLAMMAFVGMTIQTLLFDKPLLS 178          

BLAST of EWM24914.1 vs. NCBI_GenBank
Match: gi|873237378|emb|CEL97783.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 162.54 bits (410), Expect = 5.318e-47
Identity = 85/159 (53.46%), Postives = 111/159 (69.81%), Query Frame = 0

Query:   38 SKALPFLAAPKKLDGSLVGDFGFDPMGISDQVANLKYVRAAELKHGRVAMLGFLGWVVTQF-VHLPGEIYAESNPLKAIAAVPLISHVQIFLFIAAIELATLDR----TYTADKPWDLGFDPMNMSKGKSEQQMKDLELKELKNGRLAMIAIIGLMAQT 191
            S++LPFL  P KLD S+ GD GFDP  +SDQ+ NL+++RAAELK+GRVAML  +GW+VT   +HLPG  +      +A++  PL  H+QI      +ELA LD+     Y  ++  + GFDP+N SKGKS+ QM DL LKE+KNGRLAMIAIIGLM Q+
Sbjct:   49 SQSLPFLMRPSKLDKSMAGDVGFDPFLLSDQL-NLEWMRAAELKNGRVAMLAVVGWLVTALGIHLPGRDFVG---FEAVSKNPLAVHLQIIAACGMVELANLDKDFGGNYVNNEIGNYGFDPLNFSKGKSQAQMDDLRLKEVKNGRLAMIAIIGLMVQS 203          

BLAST of EWM24914.1 vs. NCBI_GenBank
Match: gi|32394677|gb|AAN39005.1| (light-harvesting complex I polypeptide, partial [Griffithsia japonica])

HSP 1 Score: 154.836 bits (390), Expect = 1.647e-44
Identity = 81/168 (48.21%), Postives = 110/168 (65.48%), Query Frame = 0

Query:   33 VSMVQSKALPFLAAPKKLDGSLVGDFGFDPMGISDQVANLKYVRAAELKHGRVAMLGFLGWVVTQFVHLPGEIYAESNPLKAIAAVPLISHVQIFLFIAAIELATLDRTYTADKPWDLGFDPMNMSKGKSEQQMKDLELKELKNGRLAMIAIIGLMAQTAYTGIPLFS 200
            V M  S+++PFL  P KLDG+ VGD GFDP+ +SD + +L Y  AAE+KHGR+ ML  LG +V + VHLP   ++E NPLKAI AVP+   VQI   I  +ELA+   TY      DLGFDPM +    +  ++++L+LKE+KNGRLA+IA  G + Q   TG P+ +
Sbjct:    1 VRMAASESVPFLEKPSKLDGTRVGDTGFDPLYLSDYI-DLDYAAAAEIKHGRICMLATLGMLVQEVVHLPNAAFSEPNPLKAIYAVPIEGWVQIITVICLVELASFKATYETGA--DLGFDPMGLG---TPDKIEELKLKEVKNGRLAIIACTGFIFQILVTGKPILA 162          

BLAST of EWM24914.1 vs. NCBI_GenBank
Match: gi|299116531|emb|CBN74719.1| (Light harvesting complex protein [Ectocarpus siliculosus])

HSP 1 Score: 153.295 bits (386), Expect = 2.112e-43
Identity = 75/159 (47.17%), Postives = 117/159 (73.58%), Query Frame = 0

Query:   37 QSKALPFLAAPKKLDGSLVGDFGFDPMGISDQVANLKYVRAAELKHGRVAMLGFLGWVVTQFVHLPGEIYAESNPLKAIAAVPLISHVQIFLFIAAIELATLDRTYTAD--KPWDLGF-DPM--NMSKGKSEQQMKDLELKELKNGRLAMIAIIGLMAQ 190
            +SKALPFL +P  LDGS++GDFGFDP+G+++ + ++ + RAAE+KHGRVAML  +G+++TQ+VHLPG+ + ++ PL+A+  VP  +  Q+F FI   E+A + +TY+ D   PW++   DPM  ++   KSE++ + L+L E+K+ RLAM+AIIG + Q
Sbjct:   45 KSKALPFLESPATLDGSMIGDFGFDPLGLTENI-DIPFARAAEIKHGRVAMLAVVGFLLTQYVHLPGDQF-QAGPLEALTTVPAGAQAQVFTFIGTFEMAAILQTYSEDTTDPWEILLKDPMGADLFYKKSEKEQERLKLSEVKHARLAMLAIIGELTQ 201          

BLAST of EWM24914.1 vs. NCBI_GenBank
Match: gi|10636353|emb|CAC10532.1| (light-harvesting protein [Galdieria sulphuraria] >gi|19912981|emb|CAC87419.1| light-harvesting protein [Galdieria sulphuraria])

HSP 1 Score: 153.68 bits (387), Expect = 2.763e-43
Identity = 76/163 (46.63%), Postives = 111/163 (68.10%), Query Frame = 0

Query:   37 QSKALPFLAAPKKLDGSLVGDFGFDPMGISDQVANLKYVRAAELKHGRVAMLGFLGWVVTQFVHLPGEIYAESNPLKAIAAVPLISHVQIFLFIAAIEL---ATLDRTYTADK-PWDLGFDPMNMSKGKSEQQMKDLELKELKNGRLAMIAIIGLMAQTAYTG 195
            QS+A+PFL AP  LDGS+VGD GFDP+G S  + +L+Y+R +ELKH R+AML  +G++V +F+HLPG++++  +P++AI  VP+   VQIFL +A +E+   A +  T   ++ P   GFDP+ ++K K  Q      L ELKNGRLAMIA I  M Q++ + 
Sbjct:   54 QSRAIPFLKAPPSLDGSMVGDVGFDPLGFSS-IIDLRYLRESELKHCRIAMLAVVGFIVQEFIHLPGDVFSNPHPMQAIGQVPVAGWVQIFLLVAILEMIDIAAIKETLQGNREPGYFGFDPLGLAKDK--QAHDRYLLSELKNGRLAMIASIAFMVQSSRSN 213          

BLAST of EWM24914.1 vs. NCBI_GenBank
Match: gi|553180803|ref|XP_005853464.1| (light-harvesting protein [Nannochloropsis gaditana CCMP526] >gi|422295597|gb|EKU22896.1| light-harvesting protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 150.984 bits (380), Expect = 1.491e-42
Identity = 89/202 (44.06%), Postives = 125/202 (61.88%), Query Frame = 0

Query:    1 MKFASLLSLLAAPLLASAFLAPAPKTTRARGVVSMV--QSKALPFLAAPKKLDGSLVGDFGFDPMGISDQVANLKYVRAAELKHGRVAMLGFLGWVVTQFVHLPGEIYAESNPLKAIAAVPLISHVQIFLFIA---AIELATLDRTY--TADKPWDLGFDPMNMSKGKSEQQMKDLELKELKNGRLAMIAIIGLMAQTAYTG 195
            MK  S   L+ A   A+AF+ P P TTRARG VSM+  +SK++PFL  P  LDG+  GD GFDP+G +  +  L Y++ AE+KH R+AML  LGW+V  FVHLPG+++A S+      AV   +  QI ++ +   AI +  + +    +  +P D  FDP+  +  K EQ +K L+L ELKNGRLAM+A  G++ Q A TG
Sbjct:    1 MKLLSFACLIGA---AAAFVPPMPVTTRARGAVSMMAEKSKSIPFLPRPPALDGTAPGDVGFDPVGFTSWLP-LAYLQEAEIKHCRIAMLATLGWIVADFVHLPGDVHAVSSLAAHDVAVKSGALAQILIWTSIAEAISVVAISQMLEGSGRQPGDFKFDPLGFA--KDEQTLKKLQLNELKNGRLAMLAFSGIVTQAALTG 196