EWM24927.1, cds5758 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24927.1 vs. NCBI_GenBank
Match: gi|585106555|gb|EWM24927.1| (undecaprenyl diphosphate synthase [Nannochloropsis gaditana]) HSP 1 Score: 724.931 bits (1870), Expect = 0.000e+0 Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 0
Query: 1 MVKMSRKRPLFSPLRALFSVAVPYLASALLFFGLKGVRVVALRKSELSSVGRTGFLVYGGSHPRRYQHSAFVHQNNHHYHEFKEPIDEVRILPRNVEVPKHVAFILDGNGRWAEKQGLPRGAGHREGAKRALEVLQSCQALGIRTVTLYCLSTENWSRPAAEISVILACVETTLRTNLQYAHDNRIRLVVIGQSHRLPPNLQALVSQAERETALYTEGMTVCLALSYGGRDDIVQASRTLAEQAAMGEIQPQDIDEALFESCLSTGVKGVDGAPDLVIRTSGEQRWSNFMLFECAYSEFYVADVLWPDFQEPDLLAALESYGMRRRRFGGVREKRSALETEQVVGARRGDM 351
MVKMSRKRPLFSPLRALFSVAVPYLASALLFFGLKGVRVVALRKSELSSVGRTGFLVYGGSHPRRYQHSAFVHQNNHHYHEFKEPIDEVRILPRNVEVPKHVAFILDGNGRWAEKQGLPRGAGHREGAKRALEVLQSCQALGIRTVTLYCLSTENWSRPAAEISVILACVETTLRTNLQYAHDNRIRLVVIGQSHRLPPNLQALVSQAERETALYTEGMTVCLALSYGGRDDIVQASRTLAEQAAMGEIQPQDIDEALFESCLSTGVKGVDGAPDLVIRTSGEQRWSNFMLFECAYSEFYVADVLWPDFQEPDLLAALESYGMRRRRFGGVREKRSALETEQVVGARRGDM
Sbjct: 1 MVKMSRKRPLFSPLRALFSVAVPYLASALLFFGLKGVRVVALRKSELSSVGRTGFLVYGGSHPRRYQHSAFVHQNNHHYHEFKEPIDEVRILPRNVEVPKHVAFILDGNGRWAEKQGLPRGAGHREGAKRALEVLQSCQALGIRTVTLYCLSTENWSRPAAEISVILACVETTLRTNLQYAHDNRIRLVVIGQSHRLPPNLQALVSQAERETALYTEGMTVCLALSYGGRDDIVQASRTLAEQAAMGEIQPQDIDEALFESCLSTGVKGVDGAPDLVIRTSGEQRWSNFMLFECAYSEFYVADVLWPDFQEPDLLAALESYGMRRRRFGGVREKRSALETEQVVGARRGDM 351
BLAST of EWM24927.1 vs. NCBI_GenBank
Match: gi|651909694|ref|WP_026660659.1| (di-trans,poly-cis-decaprenylcistransferase [Butyrivibrio sp. AC2005]) HSP 1 Score: 235.343 bits (599), Expect = 5.785e-73 Identity = 106/242 (43.80%), Postives = 166/242 (68.60%), Query Frame = 0
Query: 92 LPRNVEVPKHVAFILDGNGRWAEKQGLPRGAGHREGAKRALEVLQSCQALGIRTVTLYCLSTENWSRPAAEISVILACVETTLRTNLQYAHDNRIRLVVIGQSHRLPPNLQALVSQAERETALYTEGMTVCLALSYGGRDDIVQASRTLAEQAAMGEIQPQDIDEALFESCLSTGVKGVDGAPDLVIRTSGEQRWSNFMLFECAYSEFYVADVLWPDFQEPDLLAALESYGMRRRRFGGVRE 333
+ N ++P+HVA ILDGNGRWA+ +GLPR GH++GAK ++L + +GI+ +T+Y STENW+RP E++ ++ ++T L+++++ + N +R VIG+ RL +++A + + ER TA T G+T +A++YG RD+IV+A R LA++ GEI +I E + L TG PDL+IRT GEQR SNF+L++CAY+EFY D+ WPDF E +L A+++YG R R++GG+++
Sbjct: 1 MEENKKIPQHVAIILDGNGRWAKAKGLPRNYGHKQGAKAVEDILVVARDMGIKYLTVYAFSTENWNRPETEVAALMTILKTYLKSSIKKSMKNNVRCQVIGERSRLSDDIRAAIEELERATAGNT-GLTFTIAINYGSRDEIVRAVRKLADECKTGEISADEISEEMISKNLDTGNI---PDPDLMIRTCGEQRLSNFLLWQCAYTEFYYTDIAWPDFDEAELQKAVDAYGNRNRKYGGLKD 238
BLAST of EWM24927.1 vs. NCBI_GenBank
Match: gi|636850382|ref|WP_024370132.1| (MULTISPECIES: di-trans,poly-cis-decaprenylcistransferase [Exiguobacterium]) HSP 1 Score: 233.417 bits (594), Expect = 3.852e-72 Identity = 111/236 (47.03%), Postives = 159/236 (67.37%), Query Frame = 0
Query: 96 VEVPKHVAFILDGNGRWAEKQGLPRGAGHREGAKRALEVLQSCQALGIRTVTLYCLSTENWSRPAAEISVILACVETTLRTNLQYAHDNRIRLVVIGQSHRLPPNLQALVSQAERETALYTEGMTVCLALSYGGRDDIVQASRTLAEQAAMGEIQPQDIDEALFESCLSTGVKGVDGAPDLVIRTSGEQRWSNFMLFECAYSEFYVADVLWPDFQEPDLLAALESYGMRRRRFGGV 331
+ +P+HVA I+DGNGRWA+K+GLPR GHREG K E +++ Q LGI+++TLY STENW+RP E++ ++ + L T+L+ + +R++V G RLP + V +A TA T G+ + AL+YGGRD++VQA R +AE A G IQP+ ID+ + L T ++ V DL+IRTSGEQR SNF+L++ AY+E + DVLWP+F+ + A+E+Y MR RRFGGV
Sbjct: 15 LSIPEHVAIIMDGNGRWAKKRGLPRIMGHREGMKSVRESVRTAQELGIKSLTLYAFSTENWTRPEEEVNFLMKLPKQFLETDLKELDEQNVRVLVAGDVTRLPRGTREAVDEARTRTATNT-GLDLVFALNYGGRDELVQAMRLIAEDVAAGRIQPEQIDDVMIGERLMTNMQDV----DLIIRTSGEQRLSNFLLWQGAYAELHFTDVLWPEFKRDHFMEAIEAYNMRTRRFGGV 245
BLAST of EWM24927.1 vs. NCBI_GenBank
Match: gi|736773843|ref|WP_034777251.1| (isoprenyl transferase [Exiguobacterium mexicanum] >gi|693730652|gb|KGI85166.1| UDP pyrophosphate synthase [Exiguobacterium mexicanum]) HSP 1 Score: 232.646 bits (592), Expect = 7.071e-72 Identity = 111/236 (47.03%), Postives = 159/236 (67.37%), Query Frame = 0
Query: 96 VEVPKHVAFILDGNGRWAEKQGLPRGAGHREGAKRALEVLQSCQALGIRTVTLYCLSTENWSRPAAEISVILACVETTLRTNLQYAHDNRIRLVVIGQSHRLPPNLQALVSQAERETALYTEGMTVCLALSYGGRDDIVQASRTLAEQAAMGEIQPQDIDEALFESCLSTGVKGVDGAPDLVIRTSGEQRWSNFMLFECAYSEFYVADVLWPDFQEPDLLAALESYGMRRRRFGGV 331
+ +P+HVA I+DGNGRWA+K+GLPR GHREG K E +++ Q LGIR++TLY STENW+RP E++ ++ + L T+L+ + +R++V G +LP + V +A TA T G+ + AL+YGGRD++VQA R +A A G+IQP DID+A+ L T ++ V DL+IRTSGEQR SNF+L++ AY+E + DVLWP+F+ + A+E+Y R RRFGGV
Sbjct: 15 LSIPEHVAIIMDGNGRWAKKRGLPRIMGHREGMKSVREAVRTAQELGIRSLTLYAFSTENWTRPEEEVNFLMKLPKQFLETDLKELDEQNVRVLVAGDVSKLPRGTRDAVDEARTRTATNT-GLDLVFALNYGGRDELVQAMRHIASDVAAGKIQPDDIDDAMIGQRLMTNMQDV----DLIIRTSGEQRLSNFLLWQGAYAELHFTDVLWPEFKRDHFVEAIEAYNARTRRFGGV 245
BLAST of EWM24927.1 vs. NCBI_GenBank
Match: gi|984858996|gb|KWW96855.1| (UDP pyrophosphate synthase [Hydrogenibacillus schlegelii] >gi|1032910943|gb|OAR04782.1| UDP pyrophosphate synthase [Hydrogenibacillus schlegelii]) HSP 1 Score: 232.261 bits (591), Expect = 8.159e-72 Identity = 122/234 (52.14%), Postives = 156/234 (66.67%), Query Frame = 0
Query: 98 VPKHVAFILDGNGRWAEKQGLPRGAGHREGAKRALEVLQSCQALGIRTVTLYCLSTENWSRPAAEISVILACVETTLRTNLQYAHDNRIRLVVIGQSHRLPPNLQALVSQAERETALYTEGMTVCLALSYGGRDDIVQASRTLAEQAAMGEIQPQDIDEALFESCLSTGVKGVDGAPDLVIRTSGEQRWSNFMLFECAYSEFYVADVLWPDFQEPDLLAALESYGMRRRRFGGV 331
VP+HVA I+DGNGRWA +GLPR GHREG K EV + LGI +TLY STENW RP E+ ++A + L+T L+ N +R+ V+G + LPP+ +A V +A R TA T G+ + AL+YGGR DI +A+R LAE A GEI+P+ IDEA + LST G+ PDL+IRTSGE R SNFMLFE AY+E + D LWPDF+ DL AA+E+Y R RRFGG+
Sbjct: 8 VPRHVAIIMDGNGRWARARGLPRVMGHREGMKTVREVALAAHGLGIEVLTLYAFSTENWKRPRDEVDFLMALPQEFLQTELENLIQNNVRVRVMGDPNPLPPHTRAAVEEAVRRTAANT-GLILNFALNYGGRMDIARAARKLAESAVAGEIRPEAIDEAAVAAALSTA--GLPD-PDLLIRTSGEMRLSNFMLFELAYTELWFVDKLWPDFRREDLEAAVEAYRRRDRRFGGL 237
BLAST of EWM24927.1 vs. NCBI_GenBank
Match: gi|1122352758|ref|WP_074037225.1| (isoprenyl transferase [Exiguobacterium profundum]) HSP 1 Score: 231.106 bits (588), Expect = 2.831e-71 Identity = 111/234 (47.44%), Postives = 159/234 (67.95%), Query Frame = 0
Query: 98 VPKHVAFILDGNGRWAEKQGLPRGAGHREGAKRALEVLQSCQALGIRTVTLYCLSTENWSRPAAEISVILACVETTLRTNLQYAHDNRIRLVVIGQSHRLPPNLQALVSQAERETALYTEGMTVCLALSYGGRDDIVQASRTLAEQAAMGEIQPQDIDEALFESCLSTGVKGVDGAPDLVIRTSGEQRWSNFMLFECAYSEFYVADVLWPDFQEPDLLAALESYGMRRRRFGGV 331
VP++VA I+DGNGRWA+K+GLPR GHREG K E +++ Q LGIR++TLY STENW+RP E+S ++ + L T+L+ H+ +R++V G + +LP + V++A RE + G+ + AL+YGGRD++VQA R++A G +QP DID+ + L T V+ V DLVIRTSGEQR SNF+L++ AY+E + +VLWP+F+ + A+ESY R RRFGGV
Sbjct: 17 VPENVAIIMDGNGRWAKKRGLPRIMGHREGMKSIREAVRTAQELGIRSLTLYAFSTENWTRPEEEVSFLMKLPKQFLETDLKELHEQNVRVLVAGDTSKLPRETREAVNEA-RERTVANTGLNLVFALNYGGRDELVQAMRSIAGDVQSGLVQPDDIDDRMIGERLMTHVQDV----DLVIRTSGEQRLSNFLLWQSAYAELHFTEVLWPEFKREHFVEAIESYNARTRRFGGV 245
BLAST of EWM24927.1 vs. NCBI_GenBank
Match: gi|1152058242|ref|WP_078146718.1| (isoprenyl transferase [Exiguobacterium sp. HVEsp1]) HSP 1 Score: 230.72 bits (587), Expect = 4.183e-71 Identity = 111/234 (47.44%), Postives = 157/234 (67.09%), Query Frame = 0
Query: 98 VPKHVAFILDGNGRWAEKQGLPRGAGHREGAKRALEVLQSCQALGIRTVTLYCLSTENWSRPAAEISVILACVETTLRTNLQYAHDNRIRLVVIGQSHRLPPNLQALVSQAERETALYTEGMTVCLALSYGGRDDIVQASRTLAEQAAMGEIQPQDIDEALFESCLSTGVKGVDGAPDLVIRTSGEQRWSNFMLFECAYSEFYVADVLWPDFQEPDLLAALESYGMRRRRFGGV 331
VP+HVA I+DGNGRWA+K+GLPR GHREG K E +++ Q LGIR++TLY STENW+RP E+S ++ + L T+L+ H+ +R++V G + +LP + V +A RE + G+ + AL+YGGRD++VQA R++A G +Q DID+ + L T V+ V DLVIRTSGEQR SNF+L++ AY+E + +VLWP+F+ + A+ESY R RRFGGV
Sbjct: 17 VPEHVAIIMDGNGRWAKKRGLPRIMGHREGMKSIREAVRTAQELGIRSLTLYAFSTENWTRPEEEVSFLMKLPKQFLETDLKELHEQNVRVLVAGDTSKLPRETREAVDEA-RERTVANTGLNLVFALNYGGRDELVQAMRSIAADVQSGLVQTDDIDDRMIGERLMTHVQDV----DLVIRTSGEQRLSNFLLWQSAYAELHFTEVLWPEFKREHFVEAIESYNARTRRFGGV 245
BLAST of EWM24927.1 vs. NCBI_GenBank
Match: gi|652431152|ref|WP_026826220.1| (di-trans,poly-cis-decaprenylcistransferase [Exiguobacterium marinum]) HSP 1 Score: 230.335 bits (586), Expect = 6.738e-71 Identity = 112/234 (47.86%), Postives = 157/234 (67.09%), Query Frame = 0
Query: 98 VPKHVAFILDGNGRWAEKQGLPRGAGHREGAKRALEVLQSCQALGIRTVTLYCLSTENWSRPAAEISVILACVETTLRTNLQYAHDNRIRLVVIGQSHRLPPNLQALVSQAERETALYTEGMTVCLALSYGGRDDIVQASRTLAEQAAMGEIQPQDIDEALFESCLSTGVKGVDGAPDLVIRTSGEQRWSNFMLFECAYSEFYVADVLWPDFQEPDLLAALESYGMRRRRFGGV 331
VP+HVA I+DGNGRWA+K+GLPR GHREG K E +++ Q LGI+++TLY STENW+RP E+S ++ + L T+L+ H+ +R++V G + +LP + V +A T + T G+ + AL+YGGRD++VQA R++AE G IQ ID+ L L T V+ V DLVIRTSGEQR SNF+L++ AY+E + +VLWP+F+ + A+ESY R RRFGGV
Sbjct: 17 VPEHVAIIMDGNGRWAKKRGLPRIMGHREGMKSIREAVRTAQELGIQSLTLYAFSTENWTRPEEEVSFLMKLPKQFLETDLKELHEQNVRVLVAGDTTKLPRETREAVDEARERTVMNT-GLKLVFALNYGGRDELVQAMRSIAEDVQSGLIQSNAIDDHLIGERLMTHVQDV----DLVIRTSGEQRLSNFLLWQSAYAELHFTEVLWPEFKREHFVEAIESYNARTRRFGGV 245
BLAST of EWM24927.1 vs. NCBI_GenBank
Match: gi|651895137|ref|WP_026653220.1| (di-trans,poly-cis-decaprenylcistransferase [Butyrivibrio proteoclasticus]) HSP 1 Score: 229.95 bits (585), Expect = 9.547e-71 Identity = 104/240 (43.33%), Postives = 161/240 (67.08%), Query Frame = 0
Query: 96 VEVPKHVAFILDGNGRWAEKQGLPRGAGHREGAKRALEVLQSCQALGIRTVTLYCLSTENWSRPAAEISVILACVETTLRTNLQYAHDNRIRLVVIGQSHRLPPNLQALVSQAERETALYTEGMTVCLALSYGGRDDIVQASRTLAEQAAMGEIQPQDIDEALFESCLSTGVKGVDGAPDLVIRTSGEQRWSNFMLFECAYSEFYVADVLWPDFQEPDLLAALESYGMRRRRFGGVREKR 335
+P+HVA ILDGNGRWA+ +G+PR GH +GAK ++L + LGI+ +T+Y STENW+RP AE+S ++ + L+T+++ + N +R VIG+ L P++QA +++ E TA T G+T +A++YG RD+I +A R +A++ G++ P+DI E + L T PDL+IRT EQR SN++L++CAY+EFY V WPDF + +L+ A+ESYG R R+FGG+++ +
Sbjct: 5 TNIPEHVAIILDGNGRWAKAKGMPRNYGHMQGAKAVEDILVDARDLGIKYLTVYAFSTENWTRPEAEVSALMTILRNYLKTSIKKSMKNNVRCRVIGERSALSPDIQAAINELEEATAGNT-GLTFTIAINYGSRDEITRAVRKVAKKVKAGDLAPEDITEQMIAENLDTNFL---PDPDLLIRTCNEQRISNYLLWQCAYTEFYYTPVAWPDFNKAELIKAIESYGNRNRKFGGLKKDQ 240
BLAST of EWM24927.1 vs. NCBI_GenBank
Match: gi|506361700|ref|WP_015881419.1| (MULTISPECIES: isoprenyl transferase [Exiguobacterium] >gi|229470088|gb|ACQ71860.1| undecaprenyl diphosphate synthase [Exiguobacterium sp. AT1b]) HSP 1 Score: 229.95 bits (585), Expect = 9.634e-71 Identity = 110/234 (47.01%), Postives = 157/234 (67.09%), Query Frame = 0
Query: 98 VPKHVAFILDGNGRWAEKQGLPRGAGHREGAKRALEVLQSCQALGIRTVTLYCLSTENWSRPAAEISVILACVETTLRTNLQYAHDNRIRLVVIGQSHRLPPNLQALVSQAERETALYTEGMTVCLALSYGGRDDIVQASRTLAEQAAMGEIQPQDIDEALFESCLSTGVKGVDGAPDLVIRTSGEQRWSNFMLFECAYSEFYVADVLWPDFQEPDLLAALESYGMRRRRFGGV 331
VP+HVA I+DGNGRWA+K+GLPR GHREG K E +++ Q LGIR++TLY STENW+RP E+S ++ + L T+L+ H+ +R++V G + +LP + V +A RE + G+ + AL+YGGRD++VQA R++A G ++ DID+ + L T V+ V DLVIRTSGEQR SNF+L++ AY+E + +VLWP+F+ + A+ESY R RRFGGV
Sbjct: 17 VPEHVAIIMDGNGRWAKKRGLPRIMGHREGMKSIREAVRTAQELGIRSLTLYAFSTENWTRPEEEVSFLMKLPKQFLETDLKELHEQNVRVLVAGDTSKLPRETREAVDEA-RERTVANTGLNLVFALNYGGRDELVQAMRSIAVDVQSGSVRADDIDDRMIGERLMTHVQDV----DLVIRTSGEQRLSNFLLWQSAYAELHFTEVLWPEFKREHFVEAIESYNARTRRFGGV 245 The following BLAST results are available for this feature:
BLAST of EWM24927.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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