EWM24908.1, cds5753 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24908.1 vs. NCBI_GenBank
Match: gi|585106536|gb|EWM24908.1| (hypothetical protein Naga_100092g7 [Nannochloropsis gaditana]) HSP 1 Score: 630.172 bits (1624), Expect = 0.000e+0 Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0
Query: 1 MLMCWYCCCRFVSSITFGRSRLTTTSPPKERLRDNICWVHLSTTMTSHKNTVALAALSADDDEEAEEDEELPEIYYKAARSSTPDIQPVLTASSVPRKDAIPAPPSLPTDVPTLQKALLSAEGRLVGFQNREQVYVHQLQEKDAEILELHRHIQELRVFQSPPEAWGRKVLVDPGVAMELRLLREKIAELEASEKFLKEDAQARHFSAESATGEALLNKCRRLQQENESLARRLGEMEKGTGEDGLEGAFRKQIAILQEQLEESKARAEDLDEERGLLSTMVYALKKQLAAAGVDDGEGSTGMAVETE 308
MLMCWYCCCRFVSSITFGRSRLTTTSPPKERLRDNICWVHLSTTMTSHKNTVALAALSADDDEEAEEDEELPEIYYKAARSSTPDIQPVLTASSVPRKDAIPAPPSLPTDVPTLQKALLSAEGRLVGFQNREQVYVHQLQEKDAEILELHRHIQELRVFQSPPEAWGRKVLVDPGVAMELRLLREKIAELEASEKFLKEDAQARHFSAESATGEALLNKCRRLQQENESLARRLGEMEKGTGEDGLEGAFRKQIAILQEQLEESKARAEDLDEERGLLSTMVYALKKQLAAAGVDDGEGSTGMAVETE
Sbjct: 1 MLMCWYCCCRFVSSITFGRSRLTTTSPPKERLRDNICWVHLSTTMTSHKNTVALAALSADDDEEAEEDEELPEIYYKAARSSTPDIQPVLTASSVPRKDAIPAPPSLPTDVPTLQKALLSAEGRLVGFQNREQVYVHQLQEKDAEILELHRHIQELRVFQSPPEAWGRKVLVDPGVAMELRLLREKIAELEASEKFLKEDAQARHFSAESATGEALLNKCRRLQQENESLARRLGEMEKGTGEDGLEGAFRKQIAILQEQLEESKARAEDLDEERGLLSTMVYALKKQLAAAGVDDGEGSTGMAVETE 308
BLAST of EWM24908.1 vs. NCBI_GenBank
Match: gi|553190759|ref|XP_005855254.1| (pre-mrna-splicing regulator female-lethal d [Nannochloropsis gaditana CCMP526] >gi|422293811|gb|EKU21111.1| pre-mrna-splicing regulator female-lethal d [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 526.554 bits (1355), Expect = 0.000e+0 Identity = 263/264 (99.62%), Postives = 263/264 (99.62%), Query Frame = 0
Query: 45 MTSHKNTVALAALSADDDEEAEEDEELPEIYYKAARSSTPDIQPVLTASSVPRKDAIPAPPSLPTDVPTLQKALLSAEGRLVGFQNREQVYVHQLQEKDAEILELHRHIQELRVFQSPPEAWGRKVLVDPGVAMELRLLREKIAELEASEKFLKEDAQARHFSAESATGEALLNKCRRLQQENESLARRLGEMEKGTGEDGLEGAFRKQIAILQEQLEESKARAEDLDEERGLLSTMVYALKKQLAAAGVDDGEGSTGMAVETE 308
MTSHKNTVALAALSADDDEEAEEDEELPEIYYKAARSSTPDIQPVLTASSVPRKDAIPAPPSLPTDVPTLQKALLSAEGRLVGFQNREQVYVHQLQEKDAEILELHRHIQELRVFQSPPEAWGRKVLVDPGVAMELRLLREKIAELEASEK LKEDAQARHFSAESATGEALLNKCRRLQQENESLARRLGEMEKGTGEDGLEGAFRKQIAILQEQLEESKARAEDLDEERGLLSTMVYALKKQLAAAGVDDGEGSTGMAVETE
Sbjct: 1 MTSHKNTVALAALSADDDEEAEEDEELPEIYYKAARSSTPDIQPVLTASSVPRKDAIPAPPSLPTDVPTLQKALLSAEGRLVGFQNREQVYVHQLQEKDAEILELHRHIQELRVFQSPPEAWGRKVLVDPGVAMELRLLREKIAELEASEKILKEDAQARHFSAESATGEALLNKCRRLQQENESLARRLGEMEKGTGEDGLEGAFRKQIAILQEQLEESKARAEDLDEERGLLSTMVYALKKQLAAAGVDDGEGSTGMAVETE 264
BLAST of EWM24908.1 vs. NCBI_GenBank
Match: gi|545355485|ref|XP_005643533.1| (hypothetical protein COCSUDRAFT_68118 [Coccomyxa subellipsoidea C-169] >gi|384245495|gb|EIE18989.1| hypothetical protein COCSUDRAFT_68118 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 79.337 bits (194), Expect = 6.461e-13 Identity = 61/169 (36.09%), Postives = 87/169 (51.48%), Query Frame = 0
Query: 98 KDAIPAPPSLPTDVPTLQKALLSAEGRLVGFQNREQVYVHQLQEKDAEILELHRHIQELRVFQSPPEAWGRKVLVDPGVAMELRLLREKIAELEASE-KFLKEDAQARHFSAESATGEALLNKCRRLQQENESLARRLGEMEKGTGEDGLEGAFRKQIAILQEQLEESK 265
++A+P P+ P+ V + L E L + RE L EK+ E LEL + R +P A R++L DP VA E LRE+ AE +A E + L+E+ QA +FS ES G L+ KCR LQ ENE + R L E G A +Q+A+ + LE+ +
Sbjct: 317 QEALPGAPADPSSVRQELERLRKVEAELASMRPREAKLQTALAEKNLENLELRWRVAAAREATNPSLAQARQLLTDPAVAREFARLREE-AEAKAQEVRRLQEELQAVNFSQESKAGRLLMAKCRALQDENEDMGRDLAE--------GHVHALERQLALAKTALEDMR 476
BLAST of EWM24908.1 vs. NCBI_GenBank
Match: gi|752861693|ref|XP_011258772.1| (PREDICTED: pre-mRNA-splicing regulator female-lethal(2)D isoform X2 [Camponotus floridanus]) HSP 1 Score: 78.5666 bits (192), Expect = 9.607e-13 Identity = 55/185 (29.73%), Postives = 102/185 (55.14%), Query Frame = 0
Query: 110 DVPTLQKALLSAEGRLVGFQNREQVYVHQLQEKDAEILELHRHIQELRVFQSPPEAWGRKVLVDPGVAMELRLLREKIAELEASEKFLKEDAQARHFSAESATGEALLNKCRRLQQENESLARRL--GEMEKGTGEDGLEGAFRKQIAILQEQLEESKARAEDLDEERGLLSTMVYALKKQLAAA 292
D+ +L+++ + V +RE++ V +L K+ E+ E I E++ Q+P A R L+DP V + ++ LR+++ + + + + A F+ +S TG+ L+ KCR L QENE L R + G + K GE L+ +F +++ Q +L+E +DLDE+ + + +Y L+++L A
Sbjct: 13 DLASLRESENKYRQQYVEASHREKILVRRLASKEQELQEYINQITEMKATQAPSAAALRSALLDPAVNILIQKLRQELITTKGKLEDTQNELSAWKFTPDSNTGKRLMAKCRLLYQENEELGRMIASGRIAKLEGELALQKSFSEEVKKSQSELDEF---LQDLDEDVEGMQSTIYFLQQELRKA 194
BLAST of EWM24908.1 vs. NCBI_GenBank
Match: gi|1069708655|ref|XP_018312161.1| (PREDICTED: pre-mRNA-splicing regulator female-lethal(2)D isoform X2 [Trachymyrmex zeteki]) HSP 1 Score: 78.5666 bits (192), Expect = 9.631e-13 Identity = 56/199 (28.14%), Postives = 106/199 (53.27%), Query Frame = 0
Query: 102 PAPPSLPT------DVPTLQKALLSAEGRLVGFQNREQVYVHQLQEKDAEILELHRHIQELRVFQSPPEAWGRKVLVDPGVAMELRLLREKIAELEASEKFLKEDAQARHFSAESATGEALLNKCRRLQQENESLARRL--GEMEKGTGEDGLEGAFRKQIAILQEQLEESKARAEDLDEERGLLSTMVYALKKQLAAA 292
P P PT ++ +L+++ + + +RE++ V +L K+ E+ E I E++ Q+P A R L+DP + + ++ LR+++ + + + + A F+ +S TG+ L+ KCR L QENE L R + G + K GE L+ +F +++ Q +L+E +DLDE+ + + +Y L+++L A
Sbjct: 43 PCHPIWPTKYCTWGELASLRESENKYRQQYIEASHREKILVRRLASKEQELQEYINQITEMKATQAPSTAALRSALLDPAINILIQKLRQELITTKGKLEDTQNELSAWKFTPDSNTGKRLMAKCRLLYQENEELGRMIASGRIAKLEGELALQKSFSEEVKKSQSELDEF---LQDLDEDVEGMQSTIYFLQQELRKA 238
BLAST of EWM24908.1 vs. NCBI_GenBank
Match: gi|322798988|gb|EFZ20448.1| (hypothetical protein SINV_03903, partial [Solenopsis invicta]) HSP 1 Score: 78.9518 bits (193), Expect = 1.027e-12 Identity = 52/165 (31.52%), Postives = 93/165 (56.36%), Query Frame = 0
Query: 130 NREQVYVHQLQEKDAEILELHRHIQELRVFQSPPEAWGRKVLVDPGVAMELRLLREKIAELEASEKFLKEDAQARHFSAESATGEALLNKCRRLQQENESLARRL--GEMEKGTGEDGLEGAFRKQIAILQEQLEESKARAEDLDEERGLLSTMVYALKKQLAAA 292
+RE++ V +L K+ E+ E I E++ Q+P A R L+DP V + ++ LR+++ + + + + A F+ +S TG+ L+ KCR L QENE L R + G + K GE L+ +F +++ Q +L+E +DLDE+ + + +Y L+++L A
Sbjct: 144 HREKILVRRLASKEQELQEYINQITEMKATQAPSAAALRSALLDPAVNVLIQKLRQELITTKGKLEDTQNELSAWKFTPDSNTGKRLMAKCRLLYQENEDLGRMIASGRIAKLEGELALQKSFSEEVKKSQSELDEF---LQDLDEDVEGMQSTIYFLQQELRKA 305
BLAST of EWM24908.1 vs. NCBI_GenBank
Match: gi|769834025|ref|XP_011647104.1| (PREDICTED: pre-mRNA-splicing regulator WTAP isoform X1 [Pogonomyrmex barbatus] >gi|769834027|ref|XP_011647105.1| PREDICTED: pre-mRNA-splicing regulator WTAP isoform X1 [Pogonomyrmex barbatus]) HSP 1 Score: 78.5666 bits (192), Expect = 1.275e-12 Identity = 52/165 (31.52%), Postives = 94/165 (56.97%), Query Frame = 0
Query: 130 NREQVYVHQLQEKDAEILELHRHIQELRVFQSPPEAWGRKVLVDPGVAMELRLLREKIAELEASEKFLKEDAQARHFSAESATGEALLNKCRRLQQENESLARRL--GEMEKGTGEDGLEGAFRKQIAILQEQLEESKARAEDLDEERGLLSTMVYALKKQLAAA 292
+RE++ V +L K+ E+ E I E++ Q+P A R L+DP V + ++ LR+++ ++ + + + A F+ +S TG+ L+ KCR L QENE L R + G + K GE L+ +F +++ Q +L+E +DLDE+ + + +Y L+++L A
Sbjct: 99 HREKILVRRLASKEQELQEYINQITEMKTTQAPSAAALRSTLLDPAVNILIQKLRQELITTKSKLEDTQNELSAWKFTPDSNTGKRLMAKCRLLYQENEELGRMIASGRIAKLEGELALQKSFSEEVKKSQSELDEF---LQDLDEDVEGMQSTIYFLQQELRKA 260
BLAST of EWM24908.1 vs. NCBI_GenBank
Match: gi|752861695|ref|XP_011258781.1| (PREDICTED: pre-mRNA-splicing regulator female-lethal(2)D isoform X3 [Camponotus floridanus]) HSP 1 Score: 78.1814 bits (191), Expect = 1.281e-12 Identity = 55/186 (29.57%), Postives = 103/186 (55.38%), Query Frame = 0
Query: 109 TDVPTLQKALLSAEGRLVGFQNREQVYVHQLQEKDAEILELHRHIQELRVFQSPPEAWGRKVLVDPGVAMELRLLREKIAELEASEKFLKEDAQARHFSAESATGEALLNKCRRLQQENESLARRL--GEMEKGTGEDGLEGAFRKQIAILQEQLEESKARAEDLDEERGLLSTMVYALKKQLAAA 292
+D+ +L+++ + V +RE++ V +L K+ E+ E I E++ Q+P A R L+DP V + ++ LR+++ + + + + A F+ +S TG+ L+ KCR L QENE L R + G + K GE L+ +F +++ Q +L+E +DLDE+ + + +Y L+++L A
Sbjct: 11 SDLASLRESENKYRQQYVEASHREKILVRRLASKEQELQEYINQITEMKATQAPSAAALRSALLDPAVNILIQKLRQELITTKGKLEDTQNELSAWKFTPDSNTGKRLMAKCRLLYQENEELGRMIASGRIAKLEGELALQKSFSEEVKKSQSELDEF---LQDLDEDVEGMQSTIYFLQQELRKA 193
BLAST of EWM24908.1 vs. NCBI_GenBank
Match: gi|769834029|ref|XP_011647106.1| (PREDICTED: pre-mRNA-splicing regulator female-lethal(2)D isoform X2 [Pogonomyrmex barbatus]) HSP 1 Score: 78.1814 bits (191), Expect = 1.369e-12 Identity = 52/164 (31.71%), Postives = 93/164 (56.71%), Query Frame = 0
Query: 131 REQVYVHQLQEKDAEILELHRHIQELRVFQSPPEAWGRKVLVDPGVAMELRLLREKIAELEASEKFLKEDAQARHFSAESATGEALLNKCRRLQQENESLARRL--GEMEKGTGEDGLEGAFRKQIAILQEQLEESKARAEDLDEERGLLSTMVYALKKQLAAA 292
RE++ V +L K+ E+ E I E++ Q+P A R L+DP V + ++ LR+++ ++ + + + A F+ +S TG+ L+ KCR L QENE L R + G + K GE L+ +F +++ Q +L+E +DLDE+ + + +Y L+++L A
Sbjct: 33 REKILVRRLASKEQELQEYINQITEMKTTQAPSAAALRSTLLDPAVNILIQKLRQELITTKSKLEDTQNELSAWKFTPDSNTGKRLMAKCRLLYQENEELGRMIASGRIAKLEGELALQKSFSEEVKKSQSELDEF---LQDLDEDVEGMQSTIYFLQQELRKA 193
BLAST of EWM24908.1 vs. NCBI_GenBank
Match: gi|752861689|ref|XP_011258753.1| (PREDICTED: pre-mRNA-splicing regulator WTAP isoform X1 [Camponotus floridanus] >gi|752861691|ref|XP_011258763.1| PREDICTED: pre-mRNA-splicing regulator WTAP isoform X1 [Camponotus floridanus] >gi|307189942|gb|EFN74178.1| Pre-mRNA-splicing regulator female-lethal(2)D [Camponotus floridanus]) HSP 1 Score: 78.1814 bits (191), Expect = 1.374e-12 Identity = 55/185 (29.73%), Postives = 102/185 (55.14%), Query Frame = 0
Query: 110 DVPTLQKALLSAEGRLVGFQNREQVYVHQLQEKDAEILELHRHIQELRVFQSPPEAWGRKVLVDPGVAMELRLLREKIAELEASEKFLKEDAQARHFSAESATGEALLNKCRRLQQENESLARRL--GEMEKGTGEDGLEGAFRKQIAILQEQLEESKARAEDLDEERGLLSTMVYALKKQLAAA 292
D+ +L+++ + V +RE++ V +L K+ E+ E I E++ Q+P A R L+DP V + ++ LR+++ + + + + A F+ +S TG+ L+ KCR L QENE L R + G + K GE L+ +F +++ Q +L+E +DLDE+ + + +Y L+++L A
Sbjct: 79 DLASLRESENKYRQQYVEASHREKILVRRLASKEQELQEYINQITEMKATQAPSAAALRSALLDPAVNILIQKLRQELITTKGKLEDTQNELSAWKFTPDSNTGKRLMAKCRLLYQENEELGRMIASGRIAKLEGELALQKSFSEEVKKSQSELDEF---LQDLDEDVEGMQSTIYFLQQELRKA 260 The following BLAST results are available for this feature:
BLAST of EWM24908.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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