EWM24929.1, cds5744 (CDS) Nannochloropsis gaditana

Overview
NameEWM24929.1
Unique Namecds5744
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:770565..771896 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24929.1
Productring zinc finger-containing protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100086g1.3829.mrna
GbkeyCDS
End range.
End range771896
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:770565..771896 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR016528VPS11
IPR024763VPS11_C
Homology
BLAST of EWM24929.1 vs. NCBI_GenBank
Match: gi|585106559|gb|EWM24929.1| (ring zinc finger-containing protein, partial [Nannochloropsis gaditana])

HSP 1 Score: 897.886 bits (2319), Expect = 0.000e+0
Identity = 443/443 (100.00%), Postives = 443/443 (100.00%), Query Frame = 0
Query:    1 PLSLAPALDAPRASAEDFFHVFIDQPHWLRTFLEGVIREPPPPPLPPASTAPPTLVSRGGYARPSPLPTPSPPLLVGNTLLELLLLDWKQAVEDATARGREGGKEGGASKPRGPSGGAIEGAMNRKGGGHGGEGEKERRKEARLRAKKAESSLLSFLEEQQGRYNEDQALILVQMHNFRPGQLCLLERQRQVELVLEAYMEEGEVGLVLQRMCRKENRKNAELWRKVLAWIVGRAGGRAGGRAGRKGAAAEEEAGEDEEEGEEESEDEDAAWDDVVRVLQMIEREHVLPPPVVLEALSQHEQLPLSVARTYIVRLLKEADGDLQSHQANIESLRKSTHEKRAEVQDLRTSARLFQSTTCAACQRPLELPAVHFLCMHSYHLDPGCLAQEGECNECAADQHHYERIQLKDQRGKATEHESFFTELEEHGFAAVASYFGKGVLNV 443
            PLSLAPALDAPRASAEDFFHVFIDQPHWLRTFLEGVIREPPPPPLPPASTAPPTLVSRGGYARPSPLPTPSPPLLVGNTLLELLLLDWKQAVEDATARGREGGKEGGASKPRGPSGGAIEGAMNRKGGGHGGEGEKERRKEARLRAKKAESSLLSFLEEQQGRYNEDQALILVQMHNFRPGQLCLLERQRQVELVLEAYMEEGEVGLVLQRMCRKENRKNAELWRKVLAWIVGRAGGRAGGRAGRKGAAAEEEAGEDEEEGEEESEDEDAAWDDVVRVLQMIEREHVLPPPVVLEALSQHEQLPLSVARTYIVRLLKEADGDLQSHQANIESLRKSTHEKRAEVQDLRTSARLFQSTTCAACQRPLELPAVHFLCMHSYHLDPGCLAQEGECNECAADQHHYERIQLKDQRGKATEHESFFTELEEHGFAAVASYFGKGVLNV
Sbjct:    1 PLSLAPALDAPRASAEDFFHVFIDQPHWLRTFLEGVIREPPPPPLPPASTAPPTLVSRGGYARPSPLPTPSPPLLVGNTLLELLLLDWKQAVEDATARGREGGKEGGASKPRGPSGGAIEGAMNRKGGGHGGEGEKERRKEARLRAKKAESSLLSFLEEQQGRYNEDQALILVQMHNFRPGQLCLLERQRQVELVLEAYMEEGEVGLVLQRMCRKENRKNAELWRKVLAWIVGRAGGRAGGRAGRKGAAAEEEAGEDEEEGEEESEDEDAAWDDVVRVLQMIEREHVLPPPVVLEALSQHEQLPLSVARTYIVRLLKEADGDLQSHQANIESLRKSTHEKRAEVQDLRTSARLFQSTTCAACQRPLELPAVHFLCMHSYHLDPGCLAQEGECNECAADQHHYERIQLKDQRGKATEHESFFTELEEHGFAAVASYFGKGVLNV 443          
BLAST of EWM24929.1 vs. NCBI_GenBank
Match: gi|553185757|ref|XP_005854301.1| (ring zinc finger-containing protein [Nannochloropsis gaditana CCMP526] >gi|422294762|gb|EKU22062.1| ring zinc finger-containing protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 422.55 bits (1085), Expect = 4.433e-145
Identity = 207/209 (99.04%), Postives = 208/209 (99.52%), Query Frame = 0
Query:  235 AGGRAGGRAGRKGAAAEEEAGEDEEEGEEESEDEDAAWDDVVRVLQMIEREHVLPPPVVLEALSQHEQLPLSVARTYIVRLLKEADGDLQSHQANIESLRKSTHEKRAEVQDLRTSARLFQSTTCAACQRPLELPAVHFLCMHSYHLDPGCLAQEGECNECAADQHHYERIQLKDQRGKATEHESFFTELEEHGFAAVASYFGKGVLNV 443
            +G RAGGRAGRKGAAAEEEAGEDEEEGEEESEDEDAAWDDVVRVLQMIEREHVLPPPVVLEALSQHEQLPLSVARTYIVRLLKEADGDLQSHQANIESLRKSTHEKRAEVQDLRTSARLFQSTTCAACQRPLELPAVHFLCMHSYHLDPGCLAQEGECNECAADQHHYERIQLKDQRGKATEHESFFTELEEHGFAAVASYFGKGVLNV
Sbjct:   40 SGPRAGGRAGRKGAAAEEEAGEDEEEGEEESEDEDAAWDDVVRVLQMIEREHVLPPPVVLEALSQHEQLPLSVARTYIVRLLKEADGDLQSHQANIESLRKSTHEKRAEVQDLRTSARLFQSTTCAACQRPLELPAVHFLCMHSYHLDPGCLAQEGECNECAADQHHYERIQLKDQRGKATEHESFFTELEEHGFAAVASYFGKGVLNV 248          
BLAST of EWM24929.1 vs. NCBI_GenBank
Match: gi|754343497|ref|XP_004349786.2| (hypothetical protein CAOG_01266 [Capsaspora owczarzaki ATCC 30864] >gi|765549220|gb|KJE89841.1| hypothetical protein CAOG_001266 [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 183.341 bits (464), Expect = 1.239e-46
Identity = 127/433 (29.33%), Postives = 194/433 (44.80%), Query Frame = 0
Query:   12 RASAEDFFHVFIDQPHWLRTFLEGVIREPPPPPLPPASTAPPTLVSRGGYARPSPLPTPSPPLLVGNTLLELLLLDWKQAVEDATARGREGGKEGGASKPRGPSGGAIEGAMNRKGGGHGGEGEKERRKEARLRAKKAESSLLSFLEEQQGRYNEDQALILVQMHNFRPGQLCLLERQRQVELVLEAYMEEGEVGLVLQRMCRKENRKNAELWRKVLAWIVGRAGGRAGGRAGRKGAAAEEEAGEDEEEGEEESEDEDAAWDDVVRVLQMIEREHVLPPPVVLEALSQHEQLPLSVARTYIVRLLKEADGDLQSHQANIESLRKSTHEKRAEVQDLRTSARLFQSTTCAACQRPLELPAVHFLCMHSYHLDPGCLAQEGECNECAADQHHYERIQLKDQRGKATEHESFFTELE--EHGFAAVASYFGKGVLN 442
            RA  E+F H++++Q  WL  FLE +I +         S A P                     LV NTLLEL L D                        R PS   +                        L+A++ E + L  L      Y+ D A++L QM+ F+ G LCL ER +  + +++ YME G+   +LQ  C+K  +++  +W +VL+    R                       EE+   E          +V +L  I++ ++LPP +V++ L Q+    LS+ + Y+ R L   +  +Q  +  I   R  T + R E+ +LRTSA++FQ T C AC  PL+LP+VHF+C HSYH    CL  E EC  CA +    + I ++ Q   A  HE+FF +++    GF+ VA Y+G+GV N
Sbjct:  828 RAKPEEFIHIYVNQMSWLMFFLEQIIDK--------ISDASP---------------------LVYNTLLELYLKD-----------------------SRDPSLTPV------------------------LKARR-EQAALDLLMRPGETYDLDHAMVLAQMYKFKEGILCLYERAKLFQQIVQYYMEVGDTTRILQ-TCKKYGKQDPNVWIQVLSHFASR-----------------------EEDCRAE----------IVEILSNIDKGNLLPPLLVVQILGQNSTATLSIIKDYVTRRLTSENQYIQEDERLIRQYRDETTKMRDEIDELRTSAKIFQVTKCTACTGPLDLPSVHFMCGHSYH--HHCLGDERECLRCAPENKKIQDI-IRAQEQSADHHEAFFKQMQAANDGFSVVADYYGRGVFN 1146          
BLAST of EWM24929.1 vs. NCBI_GenBank
Match: gi|1026773260|gb|OAE32531.1| (hypothetical protein AXG93_3242s1540 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 172.94 bits (437), Expect = 3.615e-43
Identity = 138/463 (29.81%), Postives = 206/463 (44.49%), Query Frame = 0
Query:   17 DFFHVFIDQPHWLRTFLEGVIREPPPPPLPPASTAPPTLVSRGGYARPSPLPTPSPPLLVGNTLLELLLLD------WKQAVEDA-----TARGREGGKEGGASKPRGPSGGAIEGAMNRKGGGHGGEGEKERRKEARL------------------RAKKAESSLLSFL--EEQQGRYNEDQALILVQMHNFRPGQLCLLERQRQVELVLEAYMEEGEV-GLV--LQRMCRKENRKNAELWRKVLAWIVGRAGGRAGGRAGRKGAAAEEEAGEDEEEGEEESEDEDAAWDDVVRVLQMIEREHVLPPPVVLEALSQHEQLPLSVARTYIVRLLKEADGDLQSHQANIESLRKSTHEKRAEVQDLRTSARLFQSTTCAACQRPLELPAVHFLCMHSYHLDPGCLA-QEGECNECAADQHHYERIQLKDQRGKATEHESFFTEL--EEHGFAAVASYFGKGVLN 442
            DF HVFIDQP WL  F E  + +                           +      L + NTLLEL L +        + V +A     T++     KE    K   P       + + K     G   K R KE  +                  R KKA   L +     EQQ RY+ D AL+L QMHNFR G L L E+ +  + V+  YM++G+  GL+   +R+       ++ +W  VL +             G +G    +E  E                     VL  IER+++LPP +VL+ L+++  L LSV + YI R +++    +   +  IE  ++ T   RAEV +L+T+AR+FQ + C AC   L+LPA+HFLCMHS+H    CL   E EC  CA    H   ++ ++    A +H++FF  +   E GF+ +A YFG+G+ +
Sbjct:  577 DFVHVFIDQPKWLMKFFEKYVEQ---------------------------VKDSLAHLEIHNTLLELYLSEDLRTPVLTEVVSEAPFVKETSKETPSLKEISPVKENDPFATWGLKSKSSKTIVMNGTPPKIRTKEKPVPIVVVPAVEKESPEDREERLKKALGLLKNGWGPHEQQPRYDVDLALVLCQMHNFRDGLLFLYEKMKLYKEVMVVYMKDGDYQGLISCCKRLGDASRGGDSSIWSDVLTYF------------GERGEDCSKEVKE---------------------VLVYIERDNLLPPLIVLQKLAKNATLTLSVVKDYIARQIQQETRYIDEDRRAIEKYQEETSTMRAEVHELKTNARIFQLSKCTACTSVLDLPAIHFLCMHSFH--QRCLGDNEKECPICAPAYRHVLDLK-RNLEQNAGDHDTFFQLVRNSEDGFSVIADYFGRGIFS 976          
BLAST of EWM24929.1 vs. NCBI_GenBank
Match: gi|168028770|ref|XP_001766900.1| (predicted protein [Physcomitrella patens] >gi|162681879|gb|EDQ68302.1| predicted protein [Physcomitrella patens])

HSP 1 Score: 162.155 bits (409), Expect = 1.677e-39
Identity = 103/290 (35.52%), Postives = 154/290 (53.10%), Query Frame = 0
Query:  159 EQQGRYNEDQALILVQMHNFRPGQLCLLERQRQVELVLEAYMEEGEV-GLV--LQRMCRKENRKNAELWRKVLAWIVGRAGGRAGGRAGRKGAAAEEEAGEDEEEGEEESEDEDAAWDDVVRVLQMIEREHVLPPPVVLEALSQHEQLPLSVARTYIVRLLKEADGDLQSHQANIESLRKSTHEKRAEVQDLRTSARLFQSTTCAACQRPLELPAVHFLCMHSYHLDPGCLA-QEGECNECAADQHHYERIQLKDQRGKATEHESFFTEL--EEHGFAAVASYFGKGVLN 442
            EQ  +Y+ D AL+L QMH FR G L L E+ +  + VL  YM++ +  GL+   +R+       +  LW  VL++                            + GE  S       D+V  VL  IER+++LPP +VL+ LS++ +L LSV + YI R L++    ++  +  IE  ++ T   RAEV++LR+ AR+FQ + C AC   L+LPAVHFLCMHS+H    CL   E EC  CA    H   ++ +     A +H++FF  L   + GF+ +A YFG+G+LN
Sbjct:  693 EQSPQYDVDLALVLCQMHKFRDGLLFLYEKLKLYKEVLAVYMKDHDYKGLISTCKRLGETSRGGDPTLWNDVLSYF--------------------------GDHGENCS-------DEVREVLVHIERDNLLPPLIVLQKLSKNPKLTLSVVKDYIARQLQQETRLIEEDRKVIEKYQEETEAMRAEVRELRSHARIFQLSKCTACTSALDLPAVHFLCMHSFH--QRCLGDNEKECPVCAPTSRHVLDVK-RSLEANANDHDTFFQLLRNSDDGFSVIAEYFGRGILN 946          
BLAST of EWM24929.1 vs. NCBI_GenBank
Match: gi|1173944190|gb|OQR92954.1| (vacuolar protein sorting-associated protein [Thraustotheca clavata])

HSP 1 Score: 156.762 bits (395), Expect = 9.748e-38
Identity = 116/430 (26.98%), Postives = 195/430 (45.35%), Query Frame = 0
Query:   17 DFFHVFIDQPHWLRTFLEGVIREPPPPPLPPASTAPPTLVSRGGYARPSPLPTPSPPLLVGNTLLELLLLDWKQAVEDATARGREGGKEGGASKPRGPSGGAIEGAMNRKGGGHGGEGEKERRKEARLRAKKAESSLLSFLEEQQGRYNEDQALILVQMHNFRPGQLCLLERQRQVELVLEAYMEEGEVGLVLQRMCRKENRKNAELWRKVLAWIVGRAGGRAGGRAGRKGAAAEEEAGEDEEEGEEESEDEDAAWDDVVRVLQMIEREHVL--PPPVVLEALSQHEQLPLSVARTYIVRLLKEADGDLQSHQANIESLRKSTHEKRAEVQDLRTSARLFQSTTCAACQRPLELPAVHFLCMHSYHLDPGCLAQ-EGECNECAADQHHYERIQLKDQRGKATEHESFFTELEE--HGFAAVASYFGKGVL 441
            DF H+F+     LR FLE +++                 VS                  +GNTLLE++L D  ++  D    G E  ++   ++   P+                                 +E+++LS L+  + +Y+ED ALIL+QMH  + G+  L ++     ++L+ +MEEGE   VL+ +   + + ++ LW   L +   R      G   + G   +E                   W ++ ++L +++ +  L  PP  V+  LSQ  ++PLSV R Y+V  LK+    +++    I+  ++ T + R+++  L + A +FQ+T C  C   L+LP VHF+C HSYH    C+++ E EC  CA +  H   ++ +    KA  HE FF +LE    GF  +A YFGKG+ 
Sbjct:  660 DFLHLFVSHRAQLREFLEYIVQVES--------------VSNTS---------------IGNTLLEMVLNDTHKSTTDPA--GDELDEDHAVAEEPVPTQST------------------------------SEAAVLSLLDNPRVKYDEDHALILMQMHGLKQGKRYLYQKLHMYHMLLQHHMEEGEDAAVLELV---KQQTDSNLWLLALRYFAER------GPYPKNGPNTDE-------------------WSELKQLLSLVDVQPSLQIPPLQVVSILSQSREIPLSVVRPYVVSQLKKDQAHIEADTEEIKKYKQDTQKMRSQMAALSSKAVVFQATKCDLCNHDLDLPVVHFMCGHSYH--QNCISETERECITCAPEHRHLLSLK-QSLEVKAGNHEQFFNQLETAADGFNTIAEYFGKGIF 997          
BLAST of EWM24929.1 vs. NCBI_GenBank
Match: gi|695018782|ref|XP_009396368.1| (PREDICTED: vacuolar protein-sorting-associated protein 11 homolog [Musa acuminata subsp. malaccensis])

HSP 1 Score: 156.762 bits (395), Expect = 1.182e-37
Identity = 134/447 (29.98%), Postives = 206/447 (46.09%), Query Frame = 0
Query:   14 SAEDFFHVFIDQPHWLRTFLEGVIREPPPPPLPPASTAPPTLVSRGGYARPSPLPTPSPPLLVGNTLLELLL---LDWKQAVEDATARGREGGKEGGASKPRGPSGGAIEGA---MNRKGGGHGGEGEK-ERRKEARLRAKKAESSLLSFLEEQQGRYNEDQALILVQMHNFRPGQLCLLERQRQVELVLEAYMEEGE-VGLVLQRMCRKENRK----NAELWRKVLAWIVGRAGGRAGGRAGRKGAAAEEEAGEDEEEGEEESEDEDAAWDDVVRVLQMIEREHVLPPPVVLEALSQHEQLPLSVARTYIVRLLKEADGDLQSHQANIESLRKSTHEKRAEVQDLRTSARLFQSTTCAACQRPLELPAVHFLCMHSYHLDPGCLA-QEGECNECAADQHHYERIQLKDQRG---KATEHESFFTELE--EHGFAAVASYFGKGVLN 442
            S  DF  +F+  P  L  FLE  I                           S +   +  + + NTLLEL L   L +    ++ +   R+        +P+G + G++  +   MN +      E +  ER+++     K A +S     + +Q  Y+   A+IL QM+ F+ G L L E+    + V+  YM+  +  GL+    C+K        +  LW  VL +                      E GED  +             +V  VL  IER+ +LPP VVL+ LS++  L LSV + YI R L++    ++  + +IE  ++ T   R E+QDLRT+AR+FQ + C AC   L+LPAVHF+CMHS+HL   CL   E EC ECA +   Y  I L  +R     A +   FF +L+  + GF+ +A YFGKG+++
Sbjct:  572 SPMDFVKIFVHNPKSLMEFLEKYI---------------------------SKVGDSAAQVEIHNTLLELYLSNDLSFPSISQEISNENRDPK----VGRPKGMTNGSMAESRVKMNAENKDLKKEKDHLERQQKGLALLKNAWTS-----DMEQPSYDAFLAVILCQMNAFKDGLLFLYEKMELYKEVIACYMQNHDHEGLI--ACCKKLGDSTQGGDPSLWVDVLNYF--------------------SELGEDCSK-------------EVKEVLTYIERDDILPPIVVLQTLSKNPCLTLSVVKDYIARKLEQESKLIEDDRKSIEKYQEDTASMRKEIQDLRTNARIFQLSKCTACTFTLDLPAVHFMCMHSFHL--RCLGDNEKECPECAPE---YRSI-LDTKRNLELNARDQNLFFQQLKNSKDGFSVIADYFGKGIVS 941          
BLAST of EWM24929.1 vs. NCBI_GenBank
Match: gi|955162543|emb|CUG93602.1| (clathrin-like protein, putative [Bodo saltans])

HSP 1 Score: 156.762 bits (395), Expect = 1.250e-37
Identity = 128/443 (28.89%), Postives = 202/443 (45.60%), Query Frame = 0
Query:   10 APRASAEDFFHVFIDQPHWLRTFLEGVIREPPPPPLPPASTAPPTLVSRGGYARPSPLPTPSPPLLVGNTLLELLLL-DWKQAVEDATARGREGGKEGGASKPRGPSGGAIEGAMNRKGGGHGGEGEKERRKEARLRAKKAESSLLSFLEEQQGRYNEDQALILVQMHNFRPGQLCLLERQRQVELVLEAYMEEGEVGLVLQRMCRKENRKNAELWRKVLAWIVGRAGGRAGGRAGRKGAAAEEEAGEDEEEGEEES------EDEDAAWDDVVRVLQMIEREHVLPPPVVLEALSQHEQLPLSVARTYIVRLLKEADGDLQSHQANIESLRKSTHEKRAEVQDLRTSARLFQSTTCAACQRPLELPAVHFLCMHSYHLDPGCLAQEGECNECAADQHHYERIQLKDQRGKATEHES-FFTELEEH--GFAAVASYFGKGVLN 442
            A RA+A+D  HVF+D P  L  FL+ V+          A                          +V NTLLEL L  + K++++   A    G     ++ P         GA N        +G  E        AK+ + ++ + LE  +G+Y++  AL LVQ H F  G L +LE   Q+ L  E +     V    Q    + +R   +L R                +     A+  E A ED E     S        +D   +++ RVL+ +ER  +LPP  V+E LS +++L L   R Y++R+LK+    +  +Q +I    + T++ R +++DL++SA +FQ+  C  C   L+LPAVHF+C HS+H    CL    ECN C+ +  H + +QL+ +   A  + + FF  L +   G A VA YFG+G+ +
Sbjct:  687 AKRANAQDLIHVFVDSPSCLLRFLQSVVDSGDADSHDDADGTQ----------------------IVYNTLLELYLTRELKRSIKHVNAP--VGSSTMSSTAPSMSPSSTAAGAPNTSSVSRRADGYVE------AYAKRLDHAM-ALLERHRGKYDDYHALALVQQHQFERGTLFMLE---QLRLYSEIFTHFSTVFETSQDPAAR-SRAKEKLIRTC-------EQQEYSPQQHSSSASGLEGAAEDTEREMWISLLSLLVRSQDDVSEEISRVLETVERRDLLPPVAVIEILSSNKKLQLRTVREYVLRMLKKDTEQIDKNQRDIREYTEKTNKIRNDIRDLQSSATIFQTNKCHHCNAHLDLPAVHFICKHSFH--QRCLNDVLECNICSVE--HRKVVQLQRELDDAANNSADFFRALGDRVDGAAVVAEYFGRGIFS 1083          
BLAST of EWM24929.1 vs. NCBI_GenBank
Match: gi|720045348|ref|XP_010270178.1| (PREDICTED: vacuolar protein-sorting-associated protein 11 homolog isoform X2 [Nelumbo nucifera] >gi|1102777163|ref|XP_019054859.1| PREDICTED: vacuolar protein-sorting-associated protein 11 homolog isoform X2 [Nelumbo nucifera])

HSP 1 Score: 155.992 bits (393), Expect = 1.617e-37
Identity = 129/440 (29.32%), Postives = 198/440 (45.00%), Query Frame = 0
Query:   17 DFFHVFIDQPHWLRTFLEGVIREPPPPPLPPASTAPPTLVSRGGYARPSPLPTPSPPLLVGNTLLELLL---LDWKQAVEDATARGREGGKEGGASKPRGPSGGAIEGAMNRKGGGHGGEGEKE----RRKEARLRAKKAESSLLSFLEEQQGRYNEDQALILVQMHNFRPGQLCLLERQRQVELVLEAYME----EGEVGLVLQRMCRKENRKNAELWRKVLAWIVGRAGGRAGGRAGRKGAAAEEEAGEDEEEGEEESEDEDAAWDDVVRVLQMIEREHVLPPPVVLEALSQHEQLPLSVARTYIVRLLKEADGDLQSHQANIESLRKSTHEKRAEVQDLRTSARLFQSTTCAACQRPLELPAVHFLCMHSYHLDPGCLA-QEGECNECAADQHHYERIQLKDQRGKATEHESFFTELE--EHGFAAVASYFGKGVLN 442
            DF ++F   P  L  FLE    +    P                             + + NTLLEL L   L++   +++ T          GA+K   P   + E ++ R   G G E EK+      K  RL      S L      +   Y+ D A+I  +M+ F+ G L L E+ +  + V+  YM+    EG +    +R+       +  LW  +L +                      + GED  +G +E             VL  IER+ +LPP VVL+ LS++  L LSV + YI R L+E    ++  + +IE  ++ T   R E+QDLRT+AR+FQ + C AC   L+LPAVHF+CMHS+H    CL   E EC ECA +      ++ +     A + + FF +++  + GF+ +A YFGKGV++
Sbjct:  471 DFINIFTHHPQSLMDFLEKYTNKVKDSP---------------------------AQIEIHNTLLELYLSNDLNFTSVLQENTVFDSRATSSKGAAKM--PIDDSKERSIAR---GKGIEKEKDCLGRLDKGLRLLKNAWPSDL------EHPLYDVDLAIIFCEMNAFKEGLLFLYEKMKLYKEVIACYMQAHDHEGLISCC-KRLGDSSKGGDPSLWGDLLKYF--------------------GDLGEDCSKGVKE-------------VLTYIERDDILPPIVVLQTLSRNPCLTLSVVKDYIARKLEEESKLIEEDRQSIEKYQEETLVMRKEIQDLRTNARIFQLSKCTACTFTLDLPAVHFMCMHSFH--QRCLGDNEKECPECAPEYRSVLEVK-RSLEQNAKDQDRFFQQVKNSKDGFSVIAEYFGKGVVS 835          
BLAST of EWM24929.1 vs. NCBI_GenBank
Match: gi|325183530|emb|CCA17991.1| (vacuolar protein sortingassociated protein putative [Albugo laibachii Nc14])

HSP 1 Score: 155.992 bits (393), Expect = 1.712e-37
Identity = 94/300 (31.33%), Postives = 155/300 (51.67%), Query Frame = 0
Query:  146 AKKAESSLLSFLEEQQGRYNEDQALILVQMHNFRPGQLCLLERQRQVELVLEAYMEEGEVGLVLQRMCRKENRKNAELWRKVLAWIVGRAGGRAGGRAGRKGAAAEEEAGEDEEEGEEESEDEDAAWDDVVRVLQMIEREHVLPPPVVLEALSQHEQLPLSVARTYIVRLLKEADGDLQSHQANIESLRKSTHEKRAEVQDLRTSARLFQSTTCAACQRPLELPAVHFLCMHSYHLDPGCLAQ-EGECNECAADQHHYERIQLKDQ-RGKATEHESFFTELEE--HGFAAVASYFGKGVL 441
            A   E ++++ L+  + RY+ED ALI +QMH  R G+  L  +     ++++ ++EE +   +++ + RK   K+  LW   L +   R  G       + G A+ EE                  W ++ ++L MI+   V+PP  V++ LSQ   LPLSV + YI+  L      + + +  I + +  T + + E+  L + A +FQ+T C  C   L+LPAVHF+C HS+HL+  C+++ + EC  C+ +  H   + LK Q   KA  HE F+ +LE    GF  +A YFGKG+ 
Sbjct:  671 ADMKEDAVMAILDNPRVRYDEDHALIHLQMHGMRKGKRYLFNKLHMYHMLVQHHIEEHDDQSIIEEV-RKHGDKDPNLWSLALKYFAER--GPLPKYVSKSGNASNEE------------------WKELRQLLIMIDTNPVIPPLQVVQVLSQARDLPLSVIKPYILNQLSHNQELVDNDEEKIRAFKADTRQMKEEIAQLNSKAIVFQATKCDLCNHDLDLPAVHFMCQHSFHLN--CISETDRECMTCSVEHRHI--LGLKTQLEQKAGNHEQFYNQLETSMDGFETIAEYFGKGIF 945          
The following BLAST results are available for this feature:
BLAST of EWM24929.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106559|gb|EWM24929.1|0.000e+0100.00ring zinc finger-containing protein, partial [Nann... [more]
gi|553185757|ref|XP_005854301.1|4.433e-14599.04ring zinc finger-containing protein [Nannochlorops... [more]
gi|754343497|ref|XP_004349786.2|1.239e-4629.33hypothetical protein CAOG_01266 [Capsaspora owczar... [more]
gi|1026773260|gb|OAE32531.1|3.615e-4329.81hypothetical protein AXG93_3242s1540 [Marchantia p... [more]
gi|168028770|ref|XP_001766900.1|1.677e-3935.52predicted protein [Physcomitrella patens] >gi|1626... [more]
gi|1173944190|gb|OQR92954.1|9.748e-3826.98vacuolar protein sorting-associated protein [Thrau... [more]
gi|695018782|ref|XP_009396368.1|1.182e-3729.98PREDICTED: vacuolar protein-sorting-associated pro... [more]
gi|955162543|emb|CUG93602.1|1.250e-3728.89clathrin-like protein, putative [Bodo saltans][more]
gi|720045348|ref|XP_010270178.1|1.617e-3729.32PREDICTED: vacuolar protein-sorting-associated pro... [more]
gi|325183530|emb|CCA17991.1|1.712e-3731.33vacuolar protein sortingassociated protein putativ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5759rna5759Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications