EWM24939.1, cds5735 (CDS) Nannochloropsis gaditana

Overview
NameEWM24939.1
Unique Namecds5735
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:754178..756145 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24939.1
Productsignal recognition particle receptor
Orig transcript idgnl|cribi|Naga_100086g11.3839.mrna
GeneSRP101
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:754178..756145 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0003924GTPase activity
GO:0005047signal recognition particle binding
GO:0005525GTP binding
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0006886intracellular protein transport
GO:0006614SRP-dependent cotranslational protein targeting to membrane
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
GO:0016020membrane
GO:0005785signal recognition particle receptor complex
Vocabulary: INTERPRO
TermDefinition
IPR011012Longin-like_dom
IPR027417P-loop_NTPase
IPR007222Sig_recog_particle_rcpt_asu_N
IPR003593AAA+_ATPase
IPR000897SRP54_GTPase_dom
IPR013822Signal_recog_particl_SRP54_hlx
Homology
BLAST of EWM24939.1 vs. NCBI_GenBank
Match: gi|585106569|gb|EWM24939.1| (signal recognition particle receptor [Nannochloropsis gaditana])

HSP 1 Score: 1341.25 bits (3470), Expect = 0.000e+0
Identity = 655/655 (100.00%), Postives = 655/655 (100.00%), Query Frame = 0
Query:    1 MLDQAWVFKKNGVVLWSRCVVPIKGPQEGFLGSSIVHHLIRTVLLEERAGAAQATLDKHVCKWSLSNDQPGVVFVLVYNKNVFQNLTYVDEFLRRLKEDFLATFSPATLVAALSRVNYDERFTNLLGAAEARARALRRGGNGSRKPPAMPSVGVGHAIRRGEEAEGKGEDTDGGSSTEEDEEIGGDEGRRDDDTETERTGTEEEEERVAAARRRLAARRAGAGRRKKKLAVGRATGAGVGGSGGVQEGGGAEEGAGHVRKEGGKKPTTWHDGSGRMSKSAMEALDRSKRVESLDGLAEDHQNEAAFQETRATYMPAAGETPEWEKEEVALDFLDGKETSTSSSATTSSSFFSKLFARVTGNAVLSAAEVDPIMEEMRMLLIGKNVASEIAQDICESVRTSLVGQKLPSLTSVKTVVREALERAIVRVLTPRKSTDLLRQVMAAKAEGRPYSVVFVGINGVGKSTSLSKVCYYLKQHGLRVLIAACDTFRSGAVEQLKVHARCLEVDLYDKGYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLFG 655
            MLDQAWVFKKNGVVLWSRCVVPIKGPQEGFLGSSIVHHLIRTVLLEERAGAAQATLDKHVCKWSLSNDQPGVVFVLVYNKNVFQNLTYVDEFLRRLKEDFLATFSPATLVAALSRVNYDERFTNLLGAAEARARALRRGGNGSRKPPAMPSVGVGHAIRRGEEAEGKGEDTDGGSSTEEDEEIGGDEGRRDDDTETERTGTEEEEERVAAARRRLAARRAGAGRRKKKLAVGRATGAGVGGSGGVQEGGGAEEGAGHVRKEGGKKPTTWHDGSGRMSKSAMEALDRSKRVESLDGLAEDHQNEAAFQETRATYMPAAGETPEWEKEEVALDFLDGKETSTSSSATTSSSFFSKLFARVTGNAVLSAAEVDPIMEEMRMLLIGKNVASEIAQDICESVRTSLVGQKLPSLTSVKTVVREALERAIVRVLTPRKSTDLLRQVMAAKAEGRPYSVVFVGINGVGKSTSLSKVCYYLKQHGLRVLIAACDTFRSGAVEQLKVHARCLEVDLYDKGYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLFG
Sbjct:    1 MLDQAWVFKKNGVVLWSRCVVPIKGPQEGFLGSSIVHHLIRTVLLEERAGAAQATLDKHVCKWSLSNDQPGVVFVLVYNKNVFQNLTYVDEFLRRLKEDFLATFSPATLVAALSRVNYDERFTNLLGAAEARARALRRGGNGSRKPPAMPSVGVGHAIRRGEEAEGKGEDTDGGSSTEEDEEIGGDEGRRDDDTETERTGTEEEEERVAAARRRLAARRAGAGRRKKKLAVGRATGAGVGGSGGVQEGGGAEEGAGHVRKEGGKKPTTWHDGSGRMSKSAMEALDRSKRVESLDGLAEDHQNEAAFQETRATYMPAAGETPEWEKEEVALDFLDGKETSTSSSATTSSSFFSKLFARVTGNAVLSAAEVDPIMEEMRMLLIGKNVASEIAQDICESVRTSLVGQKLPSLTSVKTVVREALERAIVRVLTPRKSTDLLRQVMAAKAEGRPYSVVFVGINGVGKSTSLSKVCYYLKQHGLRVLIAACDTFRSGAVEQLKVHARCLEVDLYDKGYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLFG 655          
BLAST of EWM24939.1 vs. NCBI_GenBank
Match: gi|553180771|ref|XP_005853460.1| (signal recognition particle receptor subunit alpha [Nannochloropsis gaditana CCMP526] >gi|422295604|gb|EKU22903.1| signal recognition particle receptor subunit alpha [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 766.533 bits (1978), Expect = 0.000e+0
Identity = 371/374 (99.20%), Postives = 373/374 (99.73%), Query Frame = 0
Query:  281 MEALDRSKRVESLDGLAEDHQNEAAFQETRATYMPAAGETPEWEKEEVALDFLDGKETSTSSSATTSSSFFSKLFARVTGNAVLSAAEVDPIMEEMRMLLIGKNVASEIAQDICESVRTSLVGQKLPSLTSVKTVVREALERAIVRVLTPRKSTDLLRQVMAAKAEGRPYSVVFVGINGVGKSTSLSKVCYYLKQHGLRVLIAACDTFRSGAVEQLKVHARCLEVDLYDKGYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLF 654
            MEALDRSKRVES+DGLAEDHQNEAA QETRATYMPAAGETPEWEKEEVALDFLDGKETSTSSSATTSSSFFSKLFAR+TGNAVLSAAEVDPIMEEMRMLLIGKNVASEIAQDICESVRTSLVGQKLPSLTSVKTVVREALERAIVRVLTPRKSTDLLRQVMAAKAEGRPYSVVFVGINGVGKSTSLSKVCYYLKQHGLRVLIAACDTFRSGAVEQLKVHARCLEVDLYDKGYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLF
Sbjct:    1 MEALDRSKRVESVDGLAEDHQNEAALQETRATYMPAAGETPEWEKEEVALDFLDGKETSTSSSATTSSSFFSKLFARMTGNAVLSAAEVDPIMEEMRMLLIGKNVASEIAQDICESVRTSLVGQKLPSLTSVKTVVREALERAIVRVLTPRKSTDLLRQVMAAKAEGRPYSVVFVGINGVGKSTSLSKVCYYLKQHGLRVLIAACDTFRSGAVEQLKVHARCLEVDLYDKGYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLF 374          
BLAST of EWM24939.1 vs. NCBI_GenBank
Match: gi|970616751|gb|KUF64897.1| (Signal recognition particle receptor subunit alpha [Phytophthora nicotianae])

HSP 1 Score: 528.48 bits (1360), Expect = 3.571e-178
Identity = 306/665 (46.02%), Postives = 414/665 (62.26%), Query Frame = 0
Query:    1 MLDQAWVFKKNGVVLWSRCVVPIKGPQEGFLGSSIVHHLIRTVLLEERAGAAQATLDKHVCKWSLSNDQPGVVFVLVYNKNVFQNLTYVDEFLRRLKEDFLATFSPATLVAALSRVNYDERFTNLLGAAEAR-----ARALRRGGNGSRKPPAMPSVGVGHAIRRGEEAEGKGEDTDGGSSTEEDEEIGGDEGRRDDDTETERTGTEEEEERVAAARRRLAARRAGAGRRKKKLAVGRATGAGVGGSGGVQEGGGAEEGAGHVRKEGGKKPTTWHDGSGRMSKSAMEALDRSKRVESLDGLAEDHQNEAAFQETRATYMPAAGETPEWEKEEVALDFLDGKETSTSSSATTSSSF-FSK-----LFARVTGNAVLSAAEVDPIMEEMRMLLIGKNVASEIAQDICESVRTSLVGQKLPSLTSVKTVVREALERAIVRVLTPRKSTDLLRQVMAAKAEGRPYSVVFVGINGVGKSTSLSKVCYYLKQHGLRVLIAACDTFRSGAVEQLKVHARCLEVDLYDKGYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLF 654
            M+D   +F K G VLWSR +          LG   V +LI  VL+E+R+G  +   D +  +W   N +  +VFV+VY K + Q L Y++E L  +K+DF+A F     +A  + V Y+++FT +L A E +     AR   R  N S+K  A   V             GK   +   ++T +  E G D    D      +  + EE E  AA R ++   R G  R+ K                         + A    K+ GKK T W D   ++SK   EALDRSK + +        + EA  +E R  Y+   GE  + + EE + D  D    S+ + + +S  + FSK       + V+GN +L   +++P++  M  +LI KNVASE+A ++CESV T++VGQ+L S T + TVVR+ALE A++R+LTP+KSTD+LR+++ AK+EGR YS+VFVG+NGVGKSTSLSKVCYYLK  G+ V+IAACDTFRSGAVEQL  HA+ L+V+L+ KGY KDPA+VAK AIK  T+ G+D VL+DTAGRMQN EPLMRALAKLVS+N+PDLV+FVGEALVGNDGIDQL++F++ALA+YS   + H+IDGI++TKFDT+D+KVGAA+SM YKTGQPI+FVGTGQKYTHLKKLNV  +L  L 
Sbjct:    1 MIDHFVIFSKTGTVLWSRTLCK--------LGGDPVDNLINRVLMEDRSGEKKFIDDAYAMQWVFEN-KLDLVFVVVYQK-ILQ-LLYIEELLEIVKKDFIAMFPQQ--IANKTPVKYEDKFTKILKATELKFTEKQARKGPRAFNASKKAKAKGVVS---------NTSGKTASSSRSATTVDSSEDGSDSLTSDG-----KDKSLEELENEAALRSKVREMRTGPRRKGK-------------------------DKAAKEPKKSGKKMTKWDDT--KVSKKEAEALDRSKTITA-------EEEEAQLREKREAYI---GEMEDSDSEEFS-DTDDESAASSGAESESSQGWSFSKTRLGNFLSTVSGNXILEREDLEPVITPMHQMLISKNVASEVADELCESVITTVVGQRLESFTRISTVVRKALEAALLRILTPKKSTDVLREILQAKSEGRAYSIVFVGVNGVGKSTSLSKVCYYLKSKGVNVMIAACDTFRSGAVEQLNQHAKVLDVELFQKGYAKDPASVAKEAIKYGTENGYDCVLIDTAGRMQNNEPLMRALAKLVSNNEPDLVLFVGEALVGNDGIDQLSMFDRALADYSDRREPHRIDGIVITKFDTIDDKVGAAVSMVYKTGQPIMFVGTGQKYTHLKKLNVRTVLRHLL 600          
BLAST of EWM24939.1 vs. NCBI_GenBank
Match: gi|675197029|ref|XP_008907399.1| (hypothetical protein PPTG_13455 [Phytophthora parasitica INRA-310] >gi|566020868|gb|ETI43779.1| hypothetical protein F443_11377 [Phytophthora parasitica P1569] >gi|567958252|gb|ETK83844.1| hypothetical protein L915_11067 [Phytophthora parasitica] >gi|567986944|gb|ETL37259.1| hypothetical protein L916_10965 [Phytophthora parasitica] >gi|568016221|gb|ETL90398.1| hypothetical protein L917_10873 [Phytophthora parasitica] >gi|568046598|gb|ETM43703.1| hypothetical protein L914_10900 [Phytophthora parasitica] >gi|568092214|gb|ETN07023.1| hypothetical protein PPTG_13455 [Phytophthora parasitica INRA-310] >gi|570948333|gb|ETP13590.1| hypothetical protein F441_11294 [Phytophthora parasitica CJ01A1] >gi|570981179|gb|ETP41653.1| hypothetical protein F442_11262 [Phytophthora parasitica P10297])

HSP 1 Score: 528.48 bits (1360), Expect = 3.730e-178
Identity = 306/665 (46.02%), Postives = 414/665 (62.26%), Query Frame = 0
Query:    1 MLDQAWVFKKNGVVLWSRCVVPIKGPQEGFLGSSIVHHLIRTVLLEERAGAAQATLDKHVCKWSLSNDQPGVVFVLVYNKNVFQNLTYVDEFLRRLKEDFLATFSPATLVAALSRVNYDERFTNLLGAAEAR-----ARALRRGGNGSRKPPAMPSVGVGHAIRRGEEAEGKGEDTDGGSSTEEDEEIGGDEGRRDDDTETERTGTEEEEERVAAARRRLAARRAGAGRRKKKLAVGRATGAGVGGSGGVQEGGGAEEGAGHVRKEGGKKPTTWHDGSGRMSKSAMEALDRSKRVESLDGLAEDHQNEAAFQETRATYMPAAGETPEWEKEEVALDFLDGKETSTSSSATTSSSF-FSK-----LFARVTGNAVLSAAEVDPIMEEMRMLLIGKNVASEIAQDICESVRTSLVGQKLPSLTSVKTVVREALERAIVRVLTPRKSTDLLRQVMAAKAEGRPYSVVFVGINGVGKSTSLSKVCYYLKQHGLRVLIAACDTFRSGAVEQLKVHARCLEVDLYDKGYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLF 654
            M+D   +F K G VLWSR +          LG   V +LI  VL+E+R+G  +   D +  +W   N +  +VFV+VY K + Q L Y++E L  +K+DF+A F     +A  + V Y+++FT +L A E +     AR   R  N S+K  A   V             GK   +   ++T +  E G D    D      +  + EE E  AA R ++   R G  R+ K                         + A    K+ GKK T W D   ++SK   EALDRSK + +        + EA  +E R  Y+   GE  + + EE + D  D    S+ + + +S  + FSK       + V+GN +L   +++P++  M  +LI KNVASE+A ++CESV T++VGQ+L S T + TVVR+ALE A++R+LTP+KSTD+LR+++ AK+EGR YS+VFVG+NGVGKSTSLSKVCYYLK  G+ V+IAACDTFRSGAVEQL  HA+ L+V+L+ KGY KDPA+VAK AIK  T+ G+D VL+DTAGRMQN EPLMRALAKLVS+N+PDLV+FVGEALVGNDGIDQL++F++ALA+YS   + H+IDGI++TKFDT+D+KVGAA+SM YKTGQPI+FVGTGQKYTHLKKLNV  +L  L 
Sbjct:    1 MIDHFVIFSKTGTVLWSRTLCK--------LGGDPVDNLINRVLMEDRSGEKKFIDDAYAMQWVFEN-KLDLVFVVVYQK-ILQ-LLYIEELLEIVKKDFIAMFPQQ--IANKTPVKYEDKFTKILKATELKFTEKQARKGPRAFNASKKAKAKGVVS---------NTSGKTASSSRSATTVDSSEDGSDSLTSDG-----KDKSLEELENEAALRSKVREMRTGPRRKGK-------------------------DKAAKEPKKSGKKMTKWDDT--KVSKKEAEALDRSKTITA-------EEEEAQLREKREAYI---GEMEDSDSEEFS-DTDDESAASSGAESESSQGWSFSKTRLGNFLSTVSGNKILEREDLEPVITPMHQMLISKNVASEVADELCESVITTVVGQRLESFTRISTVVRKALEAALLRILTPKKSTDVLREILQAKSEGRAYSIVFVGVNGVGKSTSLSKVCYYLKSKGVNVMIAACDTFRSGAVEQLNQHAKVLDVELFQKGYAKDPASVAKEAIKYGTENGYDCVLIDTAGRMQNNEPLMRALAKLVSNNEPDLVLFVGEALVGNDGIDQLSMFDRALADYSDRREPHRIDGIVITKFDTIDDKVGAAVSMVYKTGQPIMFVGTGQKYTHLKKLNVRTVLRHLL 600          
BLAST of EWM24939.1 vs. NCBI_GenBank
Match: gi|570324507|gb|ETO72455.1| (hypothetical protein F444_11447 [Phytophthora parasitica P1976])

HSP 1 Score: 528.094 bits (1359), Expect = 5.278e-178
Identity = 306/665 (46.02%), Postives = 414/665 (62.26%), Query Frame = 0
Query:    1 MLDQAWVFKKNGVVLWSRCVVPIKGPQEGFLGSSIVHHLIRTVLLEERAGAAQATLDKHVCKWSLSNDQPGVVFVLVYNKNVFQNLTYVDEFLRRLKEDFLATFSPATLVAALSRVNYDERFTNLLGAAEAR-----ARALRRGGNGSRKPPAMPSVGVGHAIRRGEEAEGKGEDTDGGSSTEEDEEIGGDEGRRDDDTETERTGTEEEEERVAAARRRLAARRAGAGRRKKKLAVGRATGAGVGGSGGVQEGGGAEEGAGHVRKEGGKKPTTWHDGSGRMSKSAMEALDRSKRVESLDGLAEDHQNEAAFQETRATYMPAAGETPEWEKEEVALDFLDGKETSTSSSATTSSSF-FSK-----LFARVTGNAVLSAAEVDPIMEEMRMLLIGKNVASEIAQDICESVRTSLVGQKLPSLTSVKTVVREALERAIVRVLTPRKSTDLLRQVMAAKAEGRPYSVVFVGINGVGKSTSLSKVCYYLKQHGLRVLIAACDTFRSGAVEQLKVHARCLEVDLYDKGYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLF 654
            M+D   +F K G VLWSR +          LG   V +LI  VL+E+R+G  +   D +  +W   N +  +VFV+VY K + Q L Y++E L  +K+DF+A F     +A  + V Y+++FT +L A E +     AR   R  N S+K  A   V             GK   +   ++T +  E G D    D      +  + EE E  AA R ++   R G  R+ K                         + A    K+ GKK T W D   ++SK   EALDRSK + +        + EA  +E R  Y+   GE  + + EE + D  D    S+ + + +S  + FSK       + V+GN +L   +++P++  M  +LI KNVASE+A ++CESV T++VGQ+L S T + TVVR+ALE A++R+LTP+KSTD+LR+++ AK+EGR YS+VFVG+NGVGKSTSLSKVCYYLK  G+ V+IAACDTFRSGAVEQL  HA+ L+V+L+ KGY KDPA+VAK AIK  T+ G+D VL+DTAGRMQN EPLMRALAKLVS+N+PDLV+FVGEALVGNDGIDQL++F++ALA+YS   + H+IDGI++TKFDT+D+KVGAA+SM YKTGQPI+FVGTGQKYTHLKKLNV  +L  L 
Sbjct:    1 MIDHFVIFSKTGTVLWSRTLCK--------LGGDPVDNLINRVLMEDRSGEKKFIDDAYAMQWVFEN-KLDLVFVVVYQK-ILQ-LLYIEELLEIVKKDFIAMFPQQ--IANKTPVKYEDKFTKILKATELKFTEKQARKGPRAFNASKKAKAKGVVS---------NTSGKTASSSRSATTVDSSEDGSDSLTSDG-----KDKSLEELENEAALRSKVREMRTGPRRKGK-------------------------DKAAKEPKKSGKKMTKWDDT--KVSKKEAEALDRSKTITA-------EEEEAQLREKREAYI---GEMEDSDSEEFS-DTDDVSAASSGAESESSQGWSFSKTRLGNFLSTVSGNKILEREDLEPVITPMHQMLISKNVASEVADELCESVITTVVGQRLESFTRISTVVRKALEAALLRILTPKKSTDVLREILQAKSEGRAYSIVFVGVNGVGKSTSLSKVCYYLKSKGVNVMIAACDTFRSGAVEQLNQHAKVLDVELFQKGYAKDPASVAKEAIKYGTENGYDCVLIDTAGRMQNNEPLMRALAKLVSNNEPDLVLFVGEALVGNDGIDQLSMFDRALADYSDRREPHRIDGIVITKFDTIDDKVGAAVSMVYKTGQPIMFVGTGQKYTHLKKLNVRTVLRHLL 600          
BLAST of EWM24939.1 vs. NCBI_GenBank
Match: gi|970658661|gb|KUF96399.1| (Nucleoside diphosphate-linked moiety X motif 8 [Phytophthora nicotianae])

HSP 1 Score: 509.99 bits (1312), Expect = 5.498e-171
Identity = 300/665 (45.11%), Postives = 409/665 (61.50%), Query Frame = 0
Query:    1 MLDQAWVFKKNGVVLWSRCVVPIKGPQEGFLGSSIVHHLIRTVLLEERAGAAQATLDKHVCKWSLSNDQPGVVFVLVYNKNVFQNLTYVDEFLRRLKEDFLATFSPATLVAALSRVNYDERFTNLLGAAEAR-----ARALRRGGNGSRKPPAMPSVGVGHAIRRGEEAEGKGEDTDGGSSTEEDEEIGGDEGRRDDDTETERTGTEEEEERVAAARRRLAARRAGAGRRKKKLAVGRATGAGVGGSGGVQEGGGAEEGAGHVRKEGGKKPTTWHDGSGRMSKSAMEALDRSKRVESLDGLAEDHQNEAAFQETRATYMPAAGETPEWEKEEVALDFLDGKETSTSSSATTSSSF-FSK-----LFARVTGNAVLSAAEVDPIMEEMRMLLIGKNVASEIAQDICESVRTSLVGQKLPSLTSVKTVVREALERAIVRVLTPRKSTDLLRQVMAAKAEGRPYSVVFVGINGVGKSTSLSKVCYYLKQHGLRVLIAACDTFRSGAVEQLKVHARCLEVDLYDKGYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLF 654
            M+D   +F K G VLWSR +          LG   V +LI  VL+E+R+G  +   D +  +W   N +  +VFV+VY K + Q L Y++E L  +K+DF+A F     +A  + V Y+++FT +L A E +     AR   R  N S+K  A   V             GK   +   ++T +  E G D    D      +  + EE E  AA R ++   R G  R+ K                         + A    K+ GKK T W D   ++SK   EALDRSK + +        + EA  +E R  Y+   GE  + + EE + D  D    S+ + + +S  + FSK       + V+GN +L   +++P++  M  +LI KNVASE+A ++CESV T++VGQ+L S T + TVVR+ALE A++R+LTP+KSTD+LR+++ AK+EGR YS+VFVG+NGVGKSTSLSKVCYYLK  G+ V+IAACDTFRSGAVEQL  HA+ L+V+L+ KGY KDPA+VAK AIK  T+ G+D VL+DTA      +PLMRALAKLVS+N+PDLV+FVGEALVGNDGIDQL++F++ALA+YS   + H+IDGI++TKFDT+D+KVGAA+SM YKTGQPI+FVGTGQKYTHLKKLNV  +L  L 
Sbjct:    1 MIDHFVIFSKTGTVLWSRTLCK--------LGGDPVDNLINRVLMEDRSGEKKFIDDAYAMQWVFEN-KLDLVFVVVYQK-ILQ-LLYIEELLEIVKKDFIAMFPQQ--IANKTPVKYEDKFTKILKATELKFTEKQARKGPRAFNASKKAKAKGVVS---------NTSGKTASSSRSATTVDSSEDGSDSLTSDG-----KDKSLEELENEAALRSKVREMRTGPRRKGK-------------------------DKAAKEPKKSGKKMTKWDDT--KVSKKEAEALDRSKTITA-------EEEEAQLREKREAYI---GEMEDSDSEEFS-DTDDESAASSGAESESSQGWSFSKTRLGNFLSTVSGNKILEREDLEPVITPMHQMLISKNVASEVADELCESVITTVVGQRLESFTRISTVVRKALEAALLRILTPKKSTDVLREILQAKSEGRAYSIVFVGVNGVGKSTSLSKVCYYLKSKGVNVMIAACDTFRSGAVEQLNQHAKVLDVELFQKGYAKDPASVAKEAIKYGTENGYDCVLIDTA------DPLMRALAKLVSNNEPDLVLFVGEALVGNDGIDQLSMFDRALADYSDRREPHRIDGIVITKFDTIDDKVGAAVSMVYKTGQPIMFVGTGQKYTHLKKLNVRTVLRHLL 594          
BLAST of EWM24939.1 vs. NCBI_GenBank
Match: gi|301117886|ref|XP_002906671.1| (signal recognition particle receptor subunit alpha [Phytophthora infestans T30-4] >gi|262108020|gb|EEY66072.1| signal recognition particle receptor subunit alpha [Phytophthora infestans T30-4])

HSP 1 Score: 503.442 bits (1295), Expect = 4.228e-169
Identity = 290/607 (47.78%), Postives = 382/607 (62.93%), Query Frame = 0
Query:   62 KWSLSNDQPGVVFVLVYNKNVFQNLTYVDEFLRRLKEDFLATFSPATLVAALSRVNYDERFTNLLGAAEAR-----ARALRRGGNGSRKPPAMPSVGVGHAIRRGEEAEGKGEDTDGGSSTEEDEEIGGDEGRRDDDTETERTGTEEEEERVAAARRRLAARRAGAGRRKKKLAVGRATGAGVGGSGGVQEGGGAEEGAGHVRKEGGKKPTTWHDGSGRMSKSAMEALDRSKRVESLDGLAEDHQNEAAFQETRATYMPAAGETPEWEKEEVALDFLDGKETSTSSSATTSSSF----FSK-----LFARVTGNAVLSAAEVDPIMEEMRMLLIGKNVASEIAQDICESVRTSLVGQKLPSLTSVKTVVREALERAIVRVLTPRKSTDLLRQVMAAKAEGRPYSVVFVGINGVGKSTSLSKVCYYLKQHGLRVLIAACDTFRSGAVEQLKVHARCLEVDLYDKGYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLF 654
            +W   N +  +VFV+VY K     L Y++E L  +K+DF+A F     +A  + V Y+++FT +L A E +     AR   R  N S+K  A    GV           GK   +   ++T +  E G D    D      +  + EE E  AA R ++   R G  RRK K    + T                        K+ GKK T W D   ++SK   EALDRSK   +        + EA  +E R  Y+   GE  + E E    DF D  + S +SS   S S     FSK       + V+GN +L   +++P++  M  +LI KNVASE+A ++CESV T++VGQ+L S T + TVVR+ALE A++R+LTP+KSTD+LR+++ AK+EGR YS+VFVG+NGVGKSTSLSKVCYYLK  G+ V+IAACDTFRSGAVEQL  HA+ L+V+L+ KGY KDPA+VAK AIK  T+ G+D VL+DTAGRMQN EPLMRALAKLVS+N+PDLV+FVGEALVGNDGIDQL++F++ALA+YS   + H+IDGI++TKFDT+D+KVGAA+SM YKTGQPI+FVGTGQKYTHLKKLNV  ++  L 
Sbjct:    2 QWVFEN-KLDLVFVVVYQK--ILRLLYIEELLEIVKKDFMAMFPQQ--IANKTPVKYEDKFTKILKATELKFTEKQARKGPRAFNASKKAKAK---GVTS------NTSGKTASSSRSATTADSSEDGSDSPTSDG-----KDKSLEELENEAALRSKVRKMRTGP-RRKGKDKAAKET------------------------KKSGKKMTKWDDT--KVSKKEAEALDRSKTTTA-------EEEEAQLREKREAYI---GEMEDSESE----DFSDTDDESAASSGAESDSSQGWSFSKTRLGNFLSTVSGNKILEREDLEPVITPMHQMLISKNVASEVADELCESVITTVVGQRLESFTRISTVVRKALEAALLRILTPKKSTDVLREILQAKSEGRAYSIVFVGVNGVGKSTSLSKVCYYLKSKGVNVMIAACDTFRSGAVEQLNQHAKVLDVELFQKGYAKDPASVAKEAIKYGTENGYDCVLIDTAGRMQNNEPLMRALAKLVSNNEPDLVLFVGEALVGNDGIDQLSMFDRALADYSDRREPHRIDGIVVTKFDTIDDKVGAAVSMVYKTGQPIMFVGTGQKYTHLKKLNVRTVMRHLL 548          
BLAST of EWM24939.1 vs. NCBI_GenBank
Match: gi|1214713274|gb|OWZ24174.1| (Signal recognition particle receptor subunit alpha [Phytophthora megakarya])

HSP 1 Score: 501.13 bits (1289), Expect = 5.887e-168
Identity = 290/617 (47.00%), Postives = 385/617 (62.40%), Query Frame = 0
Query:   62 KWSLSNDQPGVVFVLVYNKNVFQNLTYVDEFLRRLKEDFLA-----TFSPATL----VAALSRVNYDERFTNLLGAAEAR-----ARALRRGGNGSRKPPAMPSVGVGHAIRRGEEAEGKGEDTDGGSSTEEDEEIGGDEGRRDDDTETERTGTEEEEERVAAARRRLAARRAGAGRRKKKLAVGRATGAGVGGSGGVQEGGGAEEGAGHVRKEGGKKPTTWHDGSGRMSKSAMEALDRSKRVESLDGLAEDHQNEAAFQETRATYMPAAGETPEWEKEEVALDFLDGKETSTSSSATTSSSF-----FSK-----LFARVTGNAVLSAAEVDPIMEEMRMLLIGKNVASEIAQDICESVRTSLVGQKLPSLTSVKTVVREALERAIVRVLTPRKSTDLLRQVMAAKAEGRPYSVVFVGINGVGKSTSLSKVCYYLKQHGLRVLIAACDTFRSGAVEQLKVHARCLEVDLYDKGYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLF 654
            +W   N +  +VFV+VY K + Q L Y++E L  +K+DF+A     +  P T+    +A  + V Y+++FT +L A E +     AR   R  N S+K  A           +G  +   G+     S+   D    G     D  T   +  + EE E  AA R ++   R G  R+ K  AV                            K+ GKK T W D   +++K   EALDRSK V +        + EA  +E R  Y+   GE  + E +E    F D  + S +SS   S S      FSK       + V+GN +L   +++P++  M  +LI KNVASE+A ++CESV T++VGQ+L S T + TVVR+ALE A++R+LTP+KSTD+LR+++ AKAEGR YS+VFVG+NGVGKSTSLSKVCYYLK  G+ V+IAACDTFRSGAVEQL  HA+ L+V+L+ KGY KDPA+VAK AIK  T+ G+D VL+DTAGRMQN EPLMRALAKLVS+N+PDLV+FVGEALVGNDGIDQL++F++ALA+YS   + H+IDGI++TKFDT+D+KVGAA+SM YKTGQPI+FVGTGQKYTHLKKLNV  +L  L 
Sbjct:    2 QWVFEN-KLDLVFVVVYQK-ILQ-LLYIEELLEIVKKDFIAMDRARSMRPKTMFPQQIANKTPVTYEDKFTKILKATELKFTEKQARKGPRAFNASKKAKA-----------KGVTSNTSGKTASSRSAATADSSEDGS----DSPTSDGKDKSLEELENEAALRSKVRTMRTGPRRKGKDKAVKEP-------------------------KKSGKKMTKWDDT--KVTKKEAEALDRSKMVTA-------EEEEAQLREKREAYI---GEMEDSESDE----FSDTDDESAASSGAESDSSQSGWSFSKTRLGNFLSTVSGNKILEREDLEPVITPMHQMLISKNVASEVADELCESVITTVVGQRLESFTRISTVVRKALEAALLRILTPKKSTDVLREILQAKAEGRAYSIVFVGVNGVGKSTSLSKVCYYLKSKGVNVMIAACDTFRSGAVEQLNQHAKVLDVELFQKGYAKDPASVAKEAIKYGTENGYDCVLIDTAGRMQNNEPLMRALAKLVSNNEPDLVLFVGEALVGNDGIDQLSMFDRALADYSDRREPHRIDGIVITKFDTIDDKVGAAVSMVYKTGQPIMFVGTGQKYTHLKKLNVRTVLRHLL 559          
BLAST of EWM24939.1 vs. NCBI_GenBank
Match: gi|695376231|ref|XP_009515733.1| (hypothetical protein PHYSODRAFT_552205 [Phytophthora sojae] >gi|348688644|gb|EGZ28458.1| hypothetical protein PHYSODRAFT_552205 [Phytophthora sojae])

HSP 1 Score: 494.582 bits (1272), Expect = 1.444e-165
Identity = 281/606 (46.37%), Postives = 383/606 (63.20%), Query Frame = 0
Query:   62 KWSLSNDQPGVVFVLVYNKNVFQNLTYVDEFLRRLKEDFLATFSPATLVAALSRVNYDERFTNLLGAAEARARALRRGGNGSRKPPAMPSVGVGHAIRRGEEAEGKGEDTDGGSSTEEDEEIGGDEGRRDDDTETERTGTEE---EEERVAAARRRLAARRAGAGRRKKKLAVGRATGAGVGGSGGVQEGGGAEEGAGHVRKEGGKKPTTWHDGSGRMSKSAMEALDRSKRVESLDGLAEDHQNEAAFQETRATYMPAAGETPEWEKEEVALDFLDGKETSTSSS-----ATTSSSFFSK-----LFARVTGNAVLSAAEVDPIMEEMRMLLIGKNVASEIAQDICESVRTSLVGQKLPSLTSVKTVVREALERAIVRVLTPRKSTDLLRQVMAAKAEGRPYSVVFVGINGVGKSTSLSKVCYYLKQHGLRVLIAACDTFRSGAVEQLKVHARCLEVDLYDKGYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLF 654
            +W   N +  +VFV+VY K + Q L Y++E L  +K+DF+A F     +A  + V Y+++FT +L A E     L+     +RK P         A    ++A+ KG  ++    T             +D +++  +  ++   EE    AA R    R+   G R+K                        ++ A    K+ GKK T W D   +++K   EALDRSK + +        + EA  +E R  Y+   GE  + + EE    F D  + S +SS     A+ S   FSK       + V+GN +L   +++P++  M  +LI KNVASE+A ++CESV T++VGQ+L S T + TVVR+ALE A++R+LTP+KSTD+LR+++ AKAEGR YS+VFVG+NGVGKSTSLSKVCYYLK  G+ V+IAACDTFRSGAVEQL  HA+ L+V+L+ KGY KDPA+VAK AIK  T+ G+D VL+DTAGRMQN EPLMRALAKLVS+N+PDLV+FVGEALVGNDGIDQL++F++ALA+YS     H+IDGI++TKFDT+D+KVGAA+SM YKTGQP++FVGTGQKYTHLKKLNV  +L  L 
Sbjct:    2 QWVFEN-KLDLVFVVVYQK-ILQ-LLYIEELLEIVKKDFIALFPQQ--IANKTPVKYEDKFTKILKATE-----LKFTEKQTRKGP--------RAFNASKKAKAKGVTSNTAGKTASSARSAATADSSEDGSDSHTSDGKDKDLEELENEAALRSSKVRKMRTGPRRK-----------------------CKDKAAKESKKSGKKMTKWDDT--KVTKKEAEALDRSKMITA-------EEEEAQLREKREAYI---GEMEDSDSEE----FSDTDDESAASSGAESDASNSGWSFSKTRLGNFLSTVSGNKILEREDLEPVITPMHQMLISKNVASEVADELCESVVTTVVGQRLESFTRISTVVRKALEAALLRILTPKKSTDVLREILQAKAEGRAYSIVFVGVNGVGKSTSLSKVCYYLKSKGVNVMIAACDTFRSGAVEQLNQHAKVLDVELFQKGYAKDPASVAKEAIKYGTENGYDCVLIDTAGRMQNNEPLMRALAKLVSNNEPDLVLFVGEALVGNDGIDQLSMFDRALADYSDRRVPHRIDGIVITKFDTIDDKVGAAVSMVYKTGQPVMFVGTGQKYTHLKKLNVRTVLRHLL 550          
BLAST of EWM24939.1 vs. NCBI_GenBank
Match: gi|698788256|ref|XP_009827160.1| (hypothetical protein H257_04380 [Aphanomyces astaci] >gi|698788258|ref|XP_009827161.1| hypothetical protein, variant 2 [Aphanomyces astaci] >gi|698788260|ref|XP_009827162.1| hypothetical protein, variant 3 [Aphanomyces astaci] >gi|698788262|ref|XP_009827163.1| hypothetical protein, variant 1 [Aphanomyces astaci] >gi|574118249|gb|ETV83730.1| hypothetical protein H257_04380 [Aphanomyces astaci] >gi|574118250|gb|ETV83731.1| hypothetical protein, variant 1 [Aphanomyces astaci] >gi|574118251|gb|ETV83732.1| hypothetical protein, variant 2 [Aphanomyces astaci] >gi|574118252|gb|ETV83733.1| hypothetical protein, variant 3 [Aphanomyces astaci])

HSP 1 Score: 492.656 bits (1267), Expect = 2.326e-164
Identity = 287/658 (43.62%), Postives = 390/658 (59.27%), Query Frame = 0
Query:    1 MLDQAWVFKKNGVVLWSRCVVPIKGPQEGFLGSSIVHHLIRTVLLEERAGAAQATLDKHVCKWSLSNDQPGVVFVLVYNKNVFQNLTYVDEFLRRLKEDFLATFSPATLVAALSRVNYDERFTNLLGAAEARARALRRGGNGSRKPPAM--PSVGVGHAIRRGEEAEGKGEDTDGGSSTEEDEEIGGDEGRRDDDTETERTGTEEEEERVAAARRRLAARRAGAGRRKKKLAVGRATGAGVGGSGGVQEGGGAEEGAGHVRKEGGKKPTTWHDGSGRMSKSAMEALDRSKRVESLDGLAEDHQNEAAFQETRATYMPAAGETPEWEKEEVALDFLDGKETSTSSSA-TTSSSFFSKLFARVTGNAVLSAAEVDPIMEEMRMLLIGKNVASEIAQDICESVRTSLVGQKLPSLTSVKTVVREALERAIVRVLTPRKSTDLLRQVMAAKAEGRPYSVVFVGINGVGKSTSLSKVCYYLKQHGLRVLIAACDTFRSGAVEQLKVHARCLEVDLYDKGYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLFG 655
            MLD   +F ++G VLWSR +  ++G        + V  L++TVLLEER G  +   + +  +WSL N +  +V V+VY K V Q L YVDE L RLK + +A+F+   +   +   ++D  F  +L       R +      S++P A   P+V     I   + A   G+               GDE  +           + E + V A  ++    R G  R  KK    + T     GS                     K  T WHD    +SK  M  LDRS+ +          +  A+  E R  Y+   G   +  +EE   D + G ++   +S  T   + F      ++GN +L   +V P++E+ R LLI KNVASE+AQD+CESV ++++GQ+L S T ++TVV+ ALE A++R+LTP+KSTD+LRQV+AA+ +GR YS+VFVG+NGVGKSTSLSKV YYLK  G++++IAACDTFRSGAVEQL  H + L+V L+++GY KDPA+VAK AI    D G D VL+DTAGRMQN EPLMRALAKLVS N PDLV+FVGEALVGNDGIDQL++F++AL +YS      ++DGI++TKFDT+D+KVGAA+SM YKTGQPI+FVGTGQKYTHL KLNV  +L  L  
Sbjct:    1 MLDHVSIFSQSGTVLWSRSMCKLRG--------NPVDQLVKTVLLEERLGRKEFNYESYQMRWSLEN-KLQLVLVVVYQK-VLQ-LLYVDELLERLKREVVASFADE-IRTRVQIASFDSTFDRIL-------RDVESAHLKSKRPVATHAPAVVSSKEIELTQNAHVDGD---------------GDELEK----------LKHELKLVGAGSKQPKTMRTGP-RTGKKKGGKKDTDEPAKGSNN-------------------KVKTVWHDPKATISKKDMAGLDRSRELNV-------DEEAASLAEKRKEYIGEGGGVDDDHEEEEGTDSVSGSDSDAGASGWTFGKTRFGNFLHSISGNKILDRDDVAPVVEQFRQLLISKNVASEVAQDMCESVISTMIGQRLESFTRIQTVVQTALEGALLRILTPKKSTDVLRQVLAARDQGRCYSIVFVGVNGVGKSTSLSKVAYYLKSRGVKIMIAACDTFRSGAVEQLNQHCKVLDVPLFERGYAKDPASVAKDAIAHGNDHGFDCVLIDTAGRMQNNEPLMRALAKLVSVNNPDLVLFVGEALVGNDGIDQLSLFDRALVDYSDRQVPRRVDGIVITKFDTIDDKVGAAVSMVYKTGQPIMFVGTGQKYTHLAKLNVKTVLRSLLN 587          
The following BLAST results are available for this feature:
BLAST of EWM24939.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106569|gb|EWM24939.1|0.000e+0100.00signal recognition particle receptor [Nannochlorop... [more]
gi|553180771|ref|XP_005853460.1|0.000e+099.20signal recognition particle receptor subunit alpha... [more]
gi|970616751|gb|KUF64897.1|3.571e-17846.02Signal recognition particle receptor subunit alpha... [more]
gi|675197029|ref|XP_008907399.1|3.730e-17846.02hypothetical protein PPTG_13455 [Phytophthora para... [more]
gi|570324507|gb|ETO72455.1|5.278e-17846.02hypothetical protein F444_11447 [Phytophthora para... [more]
gi|970658661|gb|KUF96399.1|5.498e-17145.11Nucleoside diphosphate-linked moiety X motif 8 [Ph... [more]
gi|301117886|ref|XP_002906671.1|4.228e-16947.78signal recognition particle receptor subunit alpha... [more]
gi|1214713274|gb|OWZ24174.1|5.887e-16847.00Signal recognition particle receptor subunit alpha... [more]
gi|695376231|ref|XP_009515733.1|1.444e-16546.37hypothetical protein PHYSODRAFT_552205 [Phytophtho... [more]
gi|698788256|ref|XP_009827160.1|2.326e-16443.62hypothetical protein H257_04380 [Aphanomyces astac... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5750rna5750Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications