EWM24939.1, cds5735 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24939.1 vs. NCBI_GenBank
Match: gi|585106569|gb|EWM24939.1| (signal recognition particle receptor [Nannochloropsis gaditana]) HSP 1 Score: 1341.25 bits (3470), Expect = 0.000e+0 Identity = 655/655 (100.00%), Postives = 655/655 (100.00%), Query Frame = 0
Query: 1 MLDQAWVFKKNGVVLWSRCVVPIKGPQEGFLGSSIVHHLIRTVLLEERAGAAQATLDKHVCKWSLSNDQPGVVFVLVYNKNVFQNLTYVDEFLRRLKEDFLATFSPATLVAALSRVNYDERFTNLLGAAEARARALRRGGNGSRKPPAMPSVGVGHAIRRGEEAEGKGEDTDGGSSTEEDEEIGGDEGRRDDDTETERTGTEEEEERVAAARRRLAARRAGAGRRKKKLAVGRATGAGVGGSGGVQEGGGAEEGAGHVRKEGGKKPTTWHDGSGRMSKSAMEALDRSKRVESLDGLAEDHQNEAAFQETRATYMPAAGETPEWEKEEVALDFLDGKETSTSSSATTSSSFFSKLFARVTGNAVLSAAEVDPIMEEMRMLLIGKNVASEIAQDICESVRTSLVGQKLPSLTSVKTVVREALERAIVRVLTPRKSTDLLRQVMAAKAEGRPYSVVFVGINGVGKSTSLSKVCYYLKQHGLRVLIAACDTFRSGAVEQLKVHARCLEVDLYDKGYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLFG 655
MLDQAWVFKKNGVVLWSRCVVPIKGPQEGFLGSSIVHHLIRTVLLEERAGAAQATLDKHVCKWSLSNDQPGVVFVLVYNKNVFQNLTYVDEFLRRLKEDFLATFSPATLVAALSRVNYDERFTNLLGAAEARARALRRGGNGSRKPPAMPSVGVGHAIRRGEEAEGKGEDTDGGSSTEEDEEIGGDEGRRDDDTETERTGTEEEEERVAAARRRLAARRAGAGRRKKKLAVGRATGAGVGGSGGVQEGGGAEEGAGHVRKEGGKKPTTWHDGSGRMSKSAMEALDRSKRVESLDGLAEDHQNEAAFQETRATYMPAAGETPEWEKEEVALDFLDGKETSTSSSATTSSSFFSKLFARVTGNAVLSAAEVDPIMEEMRMLLIGKNVASEIAQDICESVRTSLVGQKLPSLTSVKTVVREALERAIVRVLTPRKSTDLLRQVMAAKAEGRPYSVVFVGINGVGKSTSLSKVCYYLKQHGLRVLIAACDTFRSGAVEQLKVHARCLEVDLYDKGYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLFG
Sbjct: 1 MLDQAWVFKKNGVVLWSRCVVPIKGPQEGFLGSSIVHHLIRTVLLEERAGAAQATLDKHVCKWSLSNDQPGVVFVLVYNKNVFQNLTYVDEFLRRLKEDFLATFSPATLVAALSRVNYDERFTNLLGAAEARARALRRGGNGSRKPPAMPSVGVGHAIRRGEEAEGKGEDTDGGSSTEEDEEIGGDEGRRDDDTETERTGTEEEEERVAAARRRLAARRAGAGRRKKKLAVGRATGAGVGGSGGVQEGGGAEEGAGHVRKEGGKKPTTWHDGSGRMSKSAMEALDRSKRVESLDGLAEDHQNEAAFQETRATYMPAAGETPEWEKEEVALDFLDGKETSTSSSATTSSSFFSKLFARVTGNAVLSAAEVDPIMEEMRMLLIGKNVASEIAQDICESVRTSLVGQKLPSLTSVKTVVREALERAIVRVLTPRKSTDLLRQVMAAKAEGRPYSVVFVGINGVGKSTSLSKVCYYLKQHGLRVLIAACDTFRSGAVEQLKVHARCLEVDLYDKGYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLFG 655
BLAST of EWM24939.1 vs. NCBI_GenBank
Match: gi|553180771|ref|XP_005853460.1| (signal recognition particle receptor subunit alpha [Nannochloropsis gaditana CCMP526] >gi|422295604|gb|EKU22903.1| signal recognition particle receptor subunit alpha [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 766.533 bits (1978), Expect = 0.000e+0 Identity = 371/374 (99.20%), Postives = 373/374 (99.73%), Query Frame = 0
Query: 281 MEALDRSKRVESLDGLAEDHQNEAAFQETRATYMPAAGETPEWEKEEVALDFLDGKETSTSSSATTSSSFFSKLFARVTGNAVLSAAEVDPIMEEMRMLLIGKNVASEIAQDICESVRTSLVGQKLPSLTSVKTVVREALERAIVRVLTPRKSTDLLRQVMAAKAEGRPYSVVFVGINGVGKSTSLSKVCYYLKQHGLRVLIAACDTFRSGAVEQLKVHARCLEVDLYDKGYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLF 654
MEALDRSKRVES+DGLAEDHQNEAA QETRATYMPAAGETPEWEKEEVALDFLDGKETSTSSSATTSSSFFSKLFAR+TGNAVLSAAEVDPIMEEMRMLLIGKNVASEIAQDICESVRTSLVGQKLPSLTSVKTVVREALERAIVRVLTPRKSTDLLRQVMAAKAEGRPYSVVFVGINGVGKSTSLSKVCYYLKQHGLRVLIAACDTFRSGAVEQLKVHARCLEVDLYDKGYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLF
Sbjct: 1 MEALDRSKRVESVDGLAEDHQNEAALQETRATYMPAAGETPEWEKEEVALDFLDGKETSTSSSATTSSSFFSKLFARMTGNAVLSAAEVDPIMEEMRMLLIGKNVASEIAQDICESVRTSLVGQKLPSLTSVKTVVREALERAIVRVLTPRKSTDLLRQVMAAKAEGRPYSVVFVGINGVGKSTSLSKVCYYLKQHGLRVLIAACDTFRSGAVEQLKVHARCLEVDLYDKGYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLF 374
BLAST of EWM24939.1 vs. NCBI_GenBank
Match: gi|970616751|gb|KUF64897.1| (Signal recognition particle receptor subunit alpha [Phytophthora nicotianae]) HSP 1 Score: 528.48 bits (1360), Expect = 3.571e-178 Identity = 306/665 (46.02%), Postives = 414/665 (62.26%), Query Frame = 0
Query: 1 MLDQAWVFKKNGVVLWSRCVVPIKGPQEGFLGSSIVHHLIRTVLLEERAGAAQATLDKHVCKWSLSNDQPGVVFVLVYNKNVFQNLTYVDEFLRRLKEDFLATFSPATLVAALSRVNYDERFTNLLGAAEAR-----ARALRRGGNGSRKPPAMPSVGVGHAIRRGEEAEGKGEDTDGGSSTEEDEEIGGDEGRRDDDTETERTGTEEEEERVAAARRRLAARRAGAGRRKKKLAVGRATGAGVGGSGGVQEGGGAEEGAGHVRKEGGKKPTTWHDGSGRMSKSAMEALDRSKRVESLDGLAEDHQNEAAFQETRATYMPAAGETPEWEKEEVALDFLDGKETSTSSSATTSSSF-FSK-----LFARVTGNAVLSAAEVDPIMEEMRMLLIGKNVASEIAQDICESVRTSLVGQKLPSLTSVKTVVREALERAIVRVLTPRKSTDLLRQVMAAKAEGRPYSVVFVGINGVGKSTSLSKVCYYLKQHGLRVLIAACDTFRSGAVEQLKVHARCLEVDLYDKGYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLF 654
M+D +F K G VLWSR + LG V +LI VL+E+R+G + D + +W N + +VFV+VY K + Q L Y++E L +K+DF+A F +A + V Y+++FT +L A E + AR R N S+K A V GK + ++T + E G D D + + EE E AA R ++ R G R+ K + A K+ GKK T W D ++SK EALDRSK + + + EA +E R Y+ GE + + EE + D D S+ + + +S + FSK + V+GN +L +++P++ M +LI KNVASE+A ++CESV T++VGQ+L S T + TVVR+ALE A++R+LTP+KSTD+LR+++ AK+EGR YS+VFVG+NGVGKSTSLSKVCYYLK G+ V+IAACDTFRSGAVEQL HA+ L+V+L+ KGY KDPA+VAK AIK T+ G+D VL+DTAGRMQN EPLMRALAKLVS+N+PDLV+FVGEALVGNDGIDQL++F++ALA+YS + H+IDGI++TKFDT+D+KVGAA+SM YKTGQPI+FVGTGQKYTHLKKLNV +L L
Sbjct: 1 MIDHFVIFSKTGTVLWSRTLCK--------LGGDPVDNLINRVLMEDRSGEKKFIDDAYAMQWVFEN-KLDLVFVVVYQK-ILQ-LLYIEELLEIVKKDFIAMFPQQ--IANKTPVKYEDKFTKILKATELKFTEKQARKGPRAFNASKKAKAKGVVS---------NTSGKTASSSRSATTVDSSEDGSDSLTSDG-----KDKSLEELENEAALRSKVREMRTGPRRKGK-------------------------DKAAKEPKKSGKKMTKWDDT--KVSKKEAEALDRSKTITA-------EEEEAQLREKREAYI---GEMEDSDSEEFS-DTDDESAASSGAESESSQGWSFSKTRLGNFLSTVSGNXILEREDLEPVITPMHQMLISKNVASEVADELCESVITTVVGQRLESFTRISTVVRKALEAALLRILTPKKSTDVLREILQAKSEGRAYSIVFVGVNGVGKSTSLSKVCYYLKSKGVNVMIAACDTFRSGAVEQLNQHAKVLDVELFQKGYAKDPASVAKEAIKYGTENGYDCVLIDTAGRMQNNEPLMRALAKLVSNNEPDLVLFVGEALVGNDGIDQLSMFDRALADYSDRREPHRIDGIVITKFDTIDDKVGAAVSMVYKTGQPIMFVGTGQKYTHLKKLNVRTVLRHLL 600
BLAST of EWM24939.1 vs. NCBI_GenBank
Match: gi|675197029|ref|XP_008907399.1| (hypothetical protein PPTG_13455 [Phytophthora parasitica INRA-310] >gi|566020868|gb|ETI43779.1| hypothetical protein F443_11377 [Phytophthora parasitica P1569] >gi|567958252|gb|ETK83844.1| hypothetical protein L915_11067 [Phytophthora parasitica] >gi|567986944|gb|ETL37259.1| hypothetical protein L916_10965 [Phytophthora parasitica] >gi|568016221|gb|ETL90398.1| hypothetical protein L917_10873 [Phytophthora parasitica] >gi|568046598|gb|ETM43703.1| hypothetical protein L914_10900 [Phytophthora parasitica] >gi|568092214|gb|ETN07023.1| hypothetical protein PPTG_13455 [Phytophthora parasitica INRA-310] >gi|570948333|gb|ETP13590.1| hypothetical protein F441_11294 [Phytophthora parasitica CJ01A1] >gi|570981179|gb|ETP41653.1| hypothetical protein F442_11262 [Phytophthora parasitica P10297]) HSP 1 Score: 528.48 bits (1360), Expect = 3.730e-178 Identity = 306/665 (46.02%), Postives = 414/665 (62.26%), Query Frame = 0
Query: 1 MLDQAWVFKKNGVVLWSRCVVPIKGPQEGFLGSSIVHHLIRTVLLEERAGAAQATLDKHVCKWSLSNDQPGVVFVLVYNKNVFQNLTYVDEFLRRLKEDFLATFSPATLVAALSRVNYDERFTNLLGAAEAR-----ARALRRGGNGSRKPPAMPSVGVGHAIRRGEEAEGKGEDTDGGSSTEEDEEIGGDEGRRDDDTETERTGTEEEEERVAAARRRLAARRAGAGRRKKKLAVGRATGAGVGGSGGVQEGGGAEEGAGHVRKEGGKKPTTWHDGSGRMSKSAMEALDRSKRVESLDGLAEDHQNEAAFQETRATYMPAAGETPEWEKEEVALDFLDGKETSTSSSATTSSSF-FSK-----LFARVTGNAVLSAAEVDPIMEEMRMLLIGKNVASEIAQDICESVRTSLVGQKLPSLTSVKTVVREALERAIVRVLTPRKSTDLLRQVMAAKAEGRPYSVVFVGINGVGKSTSLSKVCYYLKQHGLRVLIAACDTFRSGAVEQLKVHARCLEVDLYDKGYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLF 654
M+D +F K G VLWSR + LG V +LI VL+E+R+G + D + +W N + +VFV+VY K + Q L Y++E L +K+DF+A F +A + V Y+++FT +L A E + AR R N S+K A V GK + ++T + E G D D + + EE E AA R ++ R G R+ K + A K+ GKK T W D ++SK EALDRSK + + + EA +E R Y+ GE + + EE + D D S+ + + +S + FSK + V+GN +L +++P++ M +LI KNVASE+A ++CESV T++VGQ+L S T + TVVR+ALE A++R+LTP+KSTD+LR+++ AK+EGR YS+VFVG+NGVGKSTSLSKVCYYLK G+ V+IAACDTFRSGAVEQL HA+ L+V+L+ KGY KDPA+VAK AIK T+ G+D VL+DTAGRMQN EPLMRALAKLVS+N+PDLV+FVGEALVGNDGIDQL++F++ALA+YS + H+IDGI++TKFDT+D+KVGAA+SM YKTGQPI+FVGTGQKYTHLKKLNV +L L
Sbjct: 1 MIDHFVIFSKTGTVLWSRTLCK--------LGGDPVDNLINRVLMEDRSGEKKFIDDAYAMQWVFEN-KLDLVFVVVYQK-ILQ-LLYIEELLEIVKKDFIAMFPQQ--IANKTPVKYEDKFTKILKATELKFTEKQARKGPRAFNASKKAKAKGVVS---------NTSGKTASSSRSATTVDSSEDGSDSLTSDG-----KDKSLEELENEAALRSKVREMRTGPRRKGK-------------------------DKAAKEPKKSGKKMTKWDDT--KVSKKEAEALDRSKTITA-------EEEEAQLREKREAYI---GEMEDSDSEEFS-DTDDESAASSGAESESSQGWSFSKTRLGNFLSTVSGNKILEREDLEPVITPMHQMLISKNVASEVADELCESVITTVVGQRLESFTRISTVVRKALEAALLRILTPKKSTDVLREILQAKSEGRAYSIVFVGVNGVGKSTSLSKVCYYLKSKGVNVMIAACDTFRSGAVEQLNQHAKVLDVELFQKGYAKDPASVAKEAIKYGTENGYDCVLIDTAGRMQNNEPLMRALAKLVSNNEPDLVLFVGEALVGNDGIDQLSMFDRALADYSDRREPHRIDGIVITKFDTIDDKVGAAVSMVYKTGQPIMFVGTGQKYTHLKKLNVRTVLRHLL 600
BLAST of EWM24939.1 vs. NCBI_GenBank
Match: gi|570324507|gb|ETO72455.1| (hypothetical protein F444_11447 [Phytophthora parasitica P1976]) HSP 1 Score: 528.094 bits (1359), Expect = 5.278e-178 Identity = 306/665 (46.02%), Postives = 414/665 (62.26%), Query Frame = 0
Query: 1 MLDQAWVFKKNGVVLWSRCVVPIKGPQEGFLGSSIVHHLIRTVLLEERAGAAQATLDKHVCKWSLSNDQPGVVFVLVYNKNVFQNLTYVDEFLRRLKEDFLATFSPATLVAALSRVNYDERFTNLLGAAEAR-----ARALRRGGNGSRKPPAMPSVGVGHAIRRGEEAEGKGEDTDGGSSTEEDEEIGGDEGRRDDDTETERTGTEEEEERVAAARRRLAARRAGAGRRKKKLAVGRATGAGVGGSGGVQEGGGAEEGAGHVRKEGGKKPTTWHDGSGRMSKSAMEALDRSKRVESLDGLAEDHQNEAAFQETRATYMPAAGETPEWEKEEVALDFLDGKETSTSSSATTSSSF-FSK-----LFARVTGNAVLSAAEVDPIMEEMRMLLIGKNVASEIAQDICESVRTSLVGQKLPSLTSVKTVVREALERAIVRVLTPRKSTDLLRQVMAAKAEGRPYSVVFVGINGVGKSTSLSKVCYYLKQHGLRVLIAACDTFRSGAVEQLKVHARCLEVDLYDKGYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLF 654
M+D +F K G VLWSR + LG V +LI VL+E+R+G + D + +W N + +VFV+VY K + Q L Y++E L +K+DF+A F +A + V Y+++FT +L A E + AR R N S+K A V GK + ++T + E G D D + + EE E AA R ++ R G R+ K + A K+ GKK T W D ++SK EALDRSK + + + EA +E R Y+ GE + + EE + D D S+ + + +S + FSK + V+GN +L +++P++ M +LI KNVASE+A ++CESV T++VGQ+L S T + TVVR+ALE A++R+LTP+KSTD+LR+++ AK+EGR YS+VFVG+NGVGKSTSLSKVCYYLK G+ V+IAACDTFRSGAVEQL HA+ L+V+L+ KGY KDPA+VAK AIK T+ G+D VL+DTAGRMQN EPLMRALAKLVS+N+PDLV+FVGEALVGNDGIDQL++F++ALA+YS + H+IDGI++TKFDT+D+KVGAA+SM YKTGQPI+FVGTGQKYTHLKKLNV +L L
Sbjct: 1 MIDHFVIFSKTGTVLWSRTLCK--------LGGDPVDNLINRVLMEDRSGEKKFIDDAYAMQWVFEN-KLDLVFVVVYQK-ILQ-LLYIEELLEIVKKDFIAMFPQQ--IANKTPVKYEDKFTKILKATELKFTEKQARKGPRAFNASKKAKAKGVVS---------NTSGKTASSSRSATTVDSSEDGSDSLTSDG-----KDKSLEELENEAALRSKVREMRTGPRRKGK-------------------------DKAAKEPKKSGKKMTKWDDT--KVSKKEAEALDRSKTITA-------EEEEAQLREKREAYI---GEMEDSDSEEFS-DTDDVSAASSGAESESSQGWSFSKTRLGNFLSTVSGNKILEREDLEPVITPMHQMLISKNVASEVADELCESVITTVVGQRLESFTRISTVVRKALEAALLRILTPKKSTDVLREILQAKSEGRAYSIVFVGVNGVGKSTSLSKVCYYLKSKGVNVMIAACDTFRSGAVEQLNQHAKVLDVELFQKGYAKDPASVAKEAIKYGTENGYDCVLIDTAGRMQNNEPLMRALAKLVSNNEPDLVLFVGEALVGNDGIDQLSMFDRALADYSDRREPHRIDGIVITKFDTIDDKVGAAVSMVYKTGQPIMFVGTGQKYTHLKKLNVRTVLRHLL 600
BLAST of EWM24939.1 vs. NCBI_GenBank
Match: gi|970658661|gb|KUF96399.1| (Nucleoside diphosphate-linked moiety X motif 8 [Phytophthora nicotianae]) HSP 1 Score: 509.99 bits (1312), Expect = 5.498e-171 Identity = 300/665 (45.11%), Postives = 409/665 (61.50%), Query Frame = 0
Query: 1 MLDQAWVFKKNGVVLWSRCVVPIKGPQEGFLGSSIVHHLIRTVLLEERAGAAQATLDKHVCKWSLSNDQPGVVFVLVYNKNVFQNLTYVDEFLRRLKEDFLATFSPATLVAALSRVNYDERFTNLLGAAEAR-----ARALRRGGNGSRKPPAMPSVGVGHAIRRGEEAEGKGEDTDGGSSTEEDEEIGGDEGRRDDDTETERTGTEEEEERVAAARRRLAARRAGAGRRKKKLAVGRATGAGVGGSGGVQEGGGAEEGAGHVRKEGGKKPTTWHDGSGRMSKSAMEALDRSKRVESLDGLAEDHQNEAAFQETRATYMPAAGETPEWEKEEVALDFLDGKETSTSSSATTSSSF-FSK-----LFARVTGNAVLSAAEVDPIMEEMRMLLIGKNVASEIAQDICESVRTSLVGQKLPSLTSVKTVVREALERAIVRVLTPRKSTDLLRQVMAAKAEGRPYSVVFVGINGVGKSTSLSKVCYYLKQHGLRVLIAACDTFRSGAVEQLKVHARCLEVDLYDKGYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLF 654
M+D +F K G VLWSR + LG V +LI VL+E+R+G + D + +W N + +VFV+VY K + Q L Y++E L +K+DF+A F +A + V Y+++FT +L A E + AR R N S+K A V GK + ++T + E G D D + + EE E AA R ++ R G R+ K + A K+ GKK T W D ++SK EALDRSK + + + EA +E R Y+ GE + + EE + D D S+ + + +S + FSK + V+GN +L +++P++ M +LI KNVASE+A ++CESV T++VGQ+L S T + TVVR+ALE A++R+LTP+KSTD+LR+++ AK+EGR YS+VFVG+NGVGKSTSLSKVCYYLK G+ V+IAACDTFRSGAVEQL HA+ L+V+L+ KGY KDPA+VAK AIK T+ G+D VL+DTA +PLMRALAKLVS+N+PDLV+FVGEALVGNDGIDQL++F++ALA+YS + H+IDGI++TKFDT+D+KVGAA+SM YKTGQPI+FVGTGQKYTHLKKLNV +L L
Sbjct: 1 MIDHFVIFSKTGTVLWSRTLCK--------LGGDPVDNLINRVLMEDRSGEKKFIDDAYAMQWVFEN-KLDLVFVVVYQK-ILQ-LLYIEELLEIVKKDFIAMFPQQ--IANKTPVKYEDKFTKILKATELKFTEKQARKGPRAFNASKKAKAKGVVS---------NTSGKTASSSRSATTVDSSEDGSDSLTSDG-----KDKSLEELENEAALRSKVREMRTGPRRKGK-------------------------DKAAKEPKKSGKKMTKWDDT--KVSKKEAEALDRSKTITA-------EEEEAQLREKREAYI---GEMEDSDSEEFS-DTDDESAASSGAESESSQGWSFSKTRLGNFLSTVSGNKILEREDLEPVITPMHQMLISKNVASEVADELCESVITTVVGQRLESFTRISTVVRKALEAALLRILTPKKSTDVLREILQAKSEGRAYSIVFVGVNGVGKSTSLSKVCYYLKSKGVNVMIAACDTFRSGAVEQLNQHAKVLDVELFQKGYAKDPASVAKEAIKYGTENGYDCVLIDTA------DPLMRALAKLVSNNEPDLVLFVGEALVGNDGIDQLSMFDRALADYSDRREPHRIDGIVITKFDTIDDKVGAAVSMVYKTGQPIMFVGTGQKYTHLKKLNVRTVLRHLL 594
BLAST of EWM24939.1 vs. NCBI_GenBank
Match: gi|301117886|ref|XP_002906671.1| (signal recognition particle receptor subunit alpha [Phytophthora infestans T30-4] >gi|262108020|gb|EEY66072.1| signal recognition particle receptor subunit alpha [Phytophthora infestans T30-4]) HSP 1 Score: 503.442 bits (1295), Expect = 4.228e-169 Identity = 290/607 (47.78%), Postives = 382/607 (62.93%), Query Frame = 0
Query: 62 KWSLSNDQPGVVFVLVYNKNVFQNLTYVDEFLRRLKEDFLATFSPATLVAALSRVNYDERFTNLLGAAEAR-----ARALRRGGNGSRKPPAMPSVGVGHAIRRGEEAEGKGEDTDGGSSTEEDEEIGGDEGRRDDDTETERTGTEEEEERVAAARRRLAARRAGAGRRKKKLAVGRATGAGVGGSGGVQEGGGAEEGAGHVRKEGGKKPTTWHDGSGRMSKSAMEALDRSKRVESLDGLAEDHQNEAAFQETRATYMPAAGETPEWEKEEVALDFLDGKETSTSSSATTSSSF----FSK-----LFARVTGNAVLSAAEVDPIMEEMRMLLIGKNVASEIAQDICESVRTSLVGQKLPSLTSVKTVVREALERAIVRVLTPRKSTDLLRQVMAAKAEGRPYSVVFVGINGVGKSTSLSKVCYYLKQHGLRVLIAACDTFRSGAVEQLKVHARCLEVDLYDKGYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLF 654
+W N + +VFV+VY K L Y++E L +K+DF+A F +A + V Y+++FT +L A E + AR R N S+K A GV GK + ++T + E G D D + + EE E AA R ++ R G RRK K + T K+ GKK T W D ++SK EALDRSK + + EA +E R Y+ GE + E E DF D + S +SS S S FSK + V+GN +L +++P++ M +LI KNVASE+A ++CESV T++VGQ+L S T + TVVR+ALE A++R+LTP+KSTD+LR+++ AK+EGR YS+VFVG+NGVGKSTSLSKVCYYLK G+ V+IAACDTFRSGAVEQL HA+ L+V+L+ KGY KDPA+VAK AIK T+ G+D VL+DTAGRMQN EPLMRALAKLVS+N+PDLV+FVGEALVGNDGIDQL++F++ALA+YS + H+IDGI++TKFDT+D+KVGAA+SM YKTGQPI+FVGTGQKYTHLKKLNV ++ L
Sbjct: 2 QWVFEN-KLDLVFVVVYQK--ILRLLYIEELLEIVKKDFMAMFPQQ--IANKTPVKYEDKFTKILKATELKFTEKQARKGPRAFNASKKAKAK---GVTS------NTSGKTASSSRSATTADSSEDGSDSPTSDG-----KDKSLEELENEAALRSKVRKMRTGP-RRKGKDKAAKET------------------------KKSGKKMTKWDDT--KVSKKEAEALDRSKTTTA-------EEEEAQLREKREAYI---GEMEDSESE----DFSDTDDESAASSGAESDSSQGWSFSKTRLGNFLSTVSGNKILEREDLEPVITPMHQMLISKNVASEVADELCESVITTVVGQRLESFTRISTVVRKALEAALLRILTPKKSTDVLREILQAKSEGRAYSIVFVGVNGVGKSTSLSKVCYYLKSKGVNVMIAACDTFRSGAVEQLNQHAKVLDVELFQKGYAKDPASVAKEAIKYGTENGYDCVLIDTAGRMQNNEPLMRALAKLVSNNEPDLVLFVGEALVGNDGIDQLSMFDRALADYSDRREPHRIDGIVVTKFDTIDDKVGAAVSMVYKTGQPIMFVGTGQKYTHLKKLNVRTVMRHLL 548
BLAST of EWM24939.1 vs. NCBI_GenBank
Match: gi|1214713274|gb|OWZ24174.1| (Signal recognition particle receptor subunit alpha [Phytophthora megakarya]) HSP 1 Score: 501.13 bits (1289), Expect = 5.887e-168 Identity = 290/617 (47.00%), Postives = 385/617 (62.40%), Query Frame = 0
Query: 62 KWSLSNDQPGVVFVLVYNKNVFQNLTYVDEFLRRLKEDFLA-----TFSPATL----VAALSRVNYDERFTNLLGAAEAR-----ARALRRGGNGSRKPPAMPSVGVGHAIRRGEEAEGKGEDTDGGSSTEEDEEIGGDEGRRDDDTETERTGTEEEEERVAAARRRLAARRAGAGRRKKKLAVGRATGAGVGGSGGVQEGGGAEEGAGHVRKEGGKKPTTWHDGSGRMSKSAMEALDRSKRVESLDGLAEDHQNEAAFQETRATYMPAAGETPEWEKEEVALDFLDGKETSTSSSATTSSSF-----FSK-----LFARVTGNAVLSAAEVDPIMEEMRMLLIGKNVASEIAQDICESVRTSLVGQKLPSLTSVKTVVREALERAIVRVLTPRKSTDLLRQVMAAKAEGRPYSVVFVGINGVGKSTSLSKVCYYLKQHGLRVLIAACDTFRSGAVEQLKVHARCLEVDLYDKGYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLF 654
+W N + +VFV+VY K + Q L Y++E L +K+DF+A + P T+ +A + V Y+++FT +L A E + AR R N S+K A +G + G+ S+ D G D T + + EE E AA R ++ R G R+ K AV K+ GKK T W D +++K EALDRSK V + + EA +E R Y+ GE + E +E F D + S +SS S S FSK + V+GN +L +++P++ M +LI KNVASE+A ++CESV T++VGQ+L S T + TVVR+ALE A++R+LTP+KSTD+LR+++ AKAEGR YS+VFVG+NGVGKSTSLSKVCYYLK G+ V+IAACDTFRSGAVEQL HA+ L+V+L+ KGY KDPA+VAK AIK T+ G+D VL+DTAGRMQN EPLMRALAKLVS+N+PDLV+FVGEALVGNDGIDQL++F++ALA+YS + H+IDGI++TKFDT+D+KVGAA+SM YKTGQPI+FVGTGQKYTHLKKLNV +L L
Sbjct: 2 QWVFEN-KLDLVFVVVYQK-ILQ-LLYIEELLEIVKKDFIAMDRARSMRPKTMFPQQIANKTPVTYEDKFTKILKATELKFTEKQARKGPRAFNASKKAKA-----------KGVTSNTSGKTASSRSAATADSSEDGS----DSPTSDGKDKSLEELENEAALRSKVRTMRTGPRRKGKDKAVKEP-------------------------KKSGKKMTKWDDT--KVTKKEAEALDRSKMVTA-------EEEEAQLREKREAYI---GEMEDSESDE----FSDTDDESAASSGAESDSSQSGWSFSKTRLGNFLSTVSGNKILEREDLEPVITPMHQMLISKNVASEVADELCESVITTVVGQRLESFTRISTVVRKALEAALLRILTPKKSTDVLREILQAKAEGRAYSIVFVGVNGVGKSTSLSKVCYYLKSKGVNVMIAACDTFRSGAVEQLNQHAKVLDVELFQKGYAKDPASVAKEAIKYGTENGYDCVLIDTAGRMQNNEPLMRALAKLVSNNEPDLVLFVGEALVGNDGIDQLSMFDRALADYSDRREPHRIDGIVITKFDTIDDKVGAAVSMVYKTGQPIMFVGTGQKYTHLKKLNVRTVLRHLL 559
BLAST of EWM24939.1 vs. NCBI_GenBank
Match: gi|695376231|ref|XP_009515733.1| (hypothetical protein PHYSODRAFT_552205 [Phytophthora sojae] >gi|348688644|gb|EGZ28458.1| hypothetical protein PHYSODRAFT_552205 [Phytophthora sojae]) HSP 1 Score: 494.582 bits (1272), Expect = 1.444e-165 Identity = 281/606 (46.37%), Postives = 383/606 (63.20%), Query Frame = 0
Query: 62 KWSLSNDQPGVVFVLVYNKNVFQNLTYVDEFLRRLKEDFLATFSPATLVAALSRVNYDERFTNLLGAAEARARALRRGGNGSRKPPAMPSVGVGHAIRRGEEAEGKGEDTDGGSSTEEDEEIGGDEGRRDDDTETERTGTEE---EEERVAAARRRLAARRAGAGRRKKKLAVGRATGAGVGGSGGVQEGGGAEEGAGHVRKEGGKKPTTWHDGSGRMSKSAMEALDRSKRVESLDGLAEDHQNEAAFQETRATYMPAAGETPEWEKEEVALDFLDGKETSTSSS-----ATTSSSFFSK-----LFARVTGNAVLSAAEVDPIMEEMRMLLIGKNVASEIAQDICESVRTSLVGQKLPSLTSVKTVVREALERAIVRVLTPRKSTDLLRQVMAAKAEGRPYSVVFVGINGVGKSTSLSKVCYYLKQHGLRVLIAACDTFRSGAVEQLKVHARCLEVDLYDKGYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLF 654
+W N + +VFV+VY K + Q L Y++E L +K+DF+A F +A + V Y+++FT +L A E L+ +RK P A ++A+ KG ++ T +D +++ + ++ EE AA R R+ G R+K ++ A K+ GKK T W D +++K EALDRSK + + + EA +E R Y+ GE + + EE F D + S +SS A+ S FSK + V+GN +L +++P++ M +LI KNVASE+A ++CESV T++VGQ+L S T + TVVR+ALE A++R+LTP+KSTD+LR+++ AKAEGR YS+VFVG+NGVGKSTSLSKVCYYLK G+ V+IAACDTFRSGAVEQL HA+ L+V+L+ KGY KDPA+VAK AIK T+ G+D VL+DTAGRMQN EPLMRALAKLVS+N+PDLV+FVGEALVGNDGIDQL++F++ALA+YS H+IDGI++TKFDT+D+KVGAA+SM YKTGQP++FVGTGQKYTHLKKLNV +L L
Sbjct: 2 QWVFEN-KLDLVFVVVYQK-ILQ-LLYIEELLEIVKKDFIALFPQQ--IANKTPVKYEDKFTKILKATE-----LKFTEKQTRKGP--------RAFNASKKAKAKGVTSNTAGKTASSARSAATADSSEDGSDSHTSDGKDKDLEELENEAALRSSKVRKMRTGPRRK-----------------------CKDKAAKESKKSGKKMTKWDDT--KVTKKEAEALDRSKMITA-------EEEEAQLREKREAYI---GEMEDSDSEE----FSDTDDESAASSGAESDASNSGWSFSKTRLGNFLSTVSGNKILEREDLEPVITPMHQMLISKNVASEVADELCESVVTTVVGQRLESFTRISTVVRKALEAALLRILTPKKSTDVLREILQAKAEGRAYSIVFVGVNGVGKSTSLSKVCYYLKSKGVNVMIAACDTFRSGAVEQLNQHAKVLDVELFQKGYAKDPASVAKEAIKYGTENGYDCVLIDTAGRMQNNEPLMRALAKLVSNNEPDLVLFVGEALVGNDGIDQLSMFDRALADYSDRRVPHRIDGIVITKFDTIDDKVGAAVSMVYKTGQPVMFVGTGQKYTHLKKLNVRTVLRHLL 550
BLAST of EWM24939.1 vs. NCBI_GenBank
Match: gi|698788256|ref|XP_009827160.1| (hypothetical protein H257_04380 [Aphanomyces astaci] >gi|698788258|ref|XP_009827161.1| hypothetical protein, variant 2 [Aphanomyces astaci] >gi|698788260|ref|XP_009827162.1| hypothetical protein, variant 3 [Aphanomyces astaci] >gi|698788262|ref|XP_009827163.1| hypothetical protein, variant 1 [Aphanomyces astaci] >gi|574118249|gb|ETV83730.1| hypothetical protein H257_04380 [Aphanomyces astaci] >gi|574118250|gb|ETV83731.1| hypothetical protein, variant 1 [Aphanomyces astaci] >gi|574118251|gb|ETV83732.1| hypothetical protein, variant 2 [Aphanomyces astaci] >gi|574118252|gb|ETV83733.1| hypothetical protein, variant 3 [Aphanomyces astaci]) HSP 1 Score: 492.656 bits (1267), Expect = 2.326e-164 Identity = 287/658 (43.62%), Postives = 390/658 (59.27%), Query Frame = 0
Query: 1 MLDQAWVFKKNGVVLWSRCVVPIKGPQEGFLGSSIVHHLIRTVLLEERAGAAQATLDKHVCKWSLSNDQPGVVFVLVYNKNVFQNLTYVDEFLRRLKEDFLATFSPATLVAALSRVNYDERFTNLLGAAEARARALRRGGNGSRKPPAM--PSVGVGHAIRRGEEAEGKGEDTDGGSSTEEDEEIGGDEGRRDDDTETERTGTEEEEERVAAARRRLAARRAGAGRRKKKLAVGRATGAGVGGSGGVQEGGGAEEGAGHVRKEGGKKPTTWHDGSGRMSKSAMEALDRSKRVESLDGLAEDHQNEAAFQETRATYMPAAGETPEWEKEEVALDFLDGKETSTSSSA-TTSSSFFSKLFARVTGNAVLSAAEVDPIMEEMRMLLIGKNVASEIAQDICESVRTSLVGQKLPSLTSVKTVVREALERAIVRVLTPRKSTDLLRQVMAAKAEGRPYSVVFVGINGVGKSTSLSKVCYYLKQHGLRVLIAACDTFRSGAVEQLKVHARCLEVDLYDKGYHKDPAAVAKAAIKEATDKGHDVVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSPPGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCLFG 655
MLD +F ++G VLWSR + ++G + V L++TVLLEER G + + + +WSL N + +V V+VY K V Q L YVDE L RLK + +A+F+ + + ++D F +L R + S++P A P+V I + A G+ GDE + + E + V A ++ R G R KK + T GS K T WHD +SK M LDRS+ + + A+ E R Y+ G + +EE D + G ++ +S T + F ++GN +L +V P++E+ R LLI KNVASE+AQD+CESV ++++GQ+L S T ++TVV+ ALE A++R+LTP+KSTD+LRQV+AA+ +GR YS+VFVG+NGVGKSTSLSKV YYLK G++++IAACDTFRSGAVEQL H + L+V L+++GY KDPA+VAK AI D G D VL+DTAGRMQN EPLMRALAKLVS N PDLV+FVGEALVGNDGIDQL++F++AL +YS ++DGI++TKFDT+D+KVGAA+SM YKTGQPI+FVGTGQKYTHL KLNV +L L
Sbjct: 1 MLDHVSIFSQSGTVLWSRSMCKLRG--------NPVDQLVKTVLLEERLGRKEFNYESYQMRWSLEN-KLQLVLVVVYQK-VLQ-LLYVDELLERLKREVVASFADE-IRTRVQIASFDSTFDRIL-------RDVESAHLKSKRPVATHAPAVVSSKEIELTQNAHVDGD---------------GDELEK----------LKHELKLVGAGSKQPKTMRTGP-RTGKKKGGKKDTDEPAKGSNN-------------------KVKTVWHDPKATISKKDMAGLDRSRELNV-------DEEAASLAEKRKEYIGEGGGVDDDHEEEEGTDSVSGSDSDAGASGWTFGKTRFGNFLHSISGNKILDRDDVAPVVEQFRQLLISKNVASEVAQDMCESVISTMIGQRLESFTRIQTVVQTALEGALLRILTPKKSTDVLRQVLAARDQGRCYSIVFVGVNGVGKSTSLSKVAYYLKSRGVKIMIAACDTFRSGAVEQLNQHCKVLDVPLFERGYAKDPASVAKDAIAHGNDHGFDCVLIDTAGRMQNNEPLMRALAKLVSVNNPDLVLFVGEALVGNDGIDQLSLFDRALVDYSDRQVPRRVDGIVITKFDTIDDKVGAAVSMVYKTGQPIMFVGTGQKYTHLAKLNVKTVLRSLLN 587 The following BLAST results are available for this feature:
BLAST of EWM24939.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|