EWM24945.1, cds5723 (CDS) Nannochloropsis gaditana

Overview
NameEWM24945.1
Unique Namecds5723
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:716672..716763 -
Alignment locationCM002466.1:716422..716627 -
Alignment locationCM002466.1:716198..716373 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24945.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100086g27.3845.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:716672..716763 -
CM002466.1supercontigCM002466.1:716422..716627 -
CM002466.1supercontigCM002466.1:716198..716373 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24945.1 vs. NCBI_GenBank
Match: gi|585106575|gb|EWM24945.1| (hypothetical protein Naga_100086g27 [Nannochloropsis gaditana])

HSP 1 Score: 317.005 bits (811), Expect = 1.530e-109
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0 
Query:    1 MTSICLCGVPHLSNGCQAFLLNHPHYLGGDMLHLFWDGTPLFCLCHLACNSFPATASRPTSYLFKPPMHMVPSLAYSQHTFTSVISIITIIVTAIIPPTSKHNSSTFTFCFTTPRRNMVCTHLPPSPSHILFFYRWRAFIVKLVSVNALCSRIHLSR 157
            MTSICLCGVPHLSNGCQAFLLNHPHYLGGDMLHLFWDGTPLFCLCHLACNSFPATASRPTSYLFKPPMHMVPSLAYSQHTFTSVISIITIIVTAIIPPTSKHNSSTFTFCFTTPRRNMVCTHLPPSPSHILFFYRWRAFIVKLVSVNALCSRIHLSR
Sbjct:    1 MTSICLCGVPHLSNGCQAFLLNHPHYLGGDMLHLFWDGTPLFCLCHLACNSFPATASRPTSYLFKPPMHMVPSLAYSQHTFTSVISIITIIVTAIIPPTSKHNSSTFTFCFTTPRRNMVCTHLPPSPSHILFFYRWRAFIVKLVSVNALCSRIHLSR 157
The following BLAST results are available for this feature:
BLAST of EWM24945.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106575|gb|EWM24945.1|1.530e-109100.00hypothetical protein Naga_100086g27 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5738rna5738Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications