EWM24961.1, cds5709 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24961.1 vs. NCBI_GenBank
Match: gi|585106592|gb|EWM24961.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 657.907 bits (1696), Expect = 0.000e+0 Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0
Query: 1 MGNLLSFSSGPSIDNFLDGKVVWITGASSGLGKAMAIEAARRGARVILSARSIDKLKNVEQECLAVSPLKTSNASRSARSRCSSSDAPSATVLVHPLDMLRYDDGSFDAAIALVLSTMGGLDILVNNAGVSTRSSAEETSLSVDQSVMATNFFGPVALTKAALCLLRQSPSRSPHIVVVNSAQGKLGLGMRTSYAASKHALTGYFDSLRAELSLESIPVTTVFPGYIRTDLSLNALTGRGEKYAQMDETTAKGLDPTRLAVKIFQAAAAGKQEVIFAPIDARAAIYLRNIIPHVVFRILARKAQKALRDRIPNESRREETKKKK 324
MGNLLSFSSGPSIDNFLDGKVVWITGASSGLGKAMAIEAARRGARVILSARSIDKLKNVEQECLAVSPLKTSNASRSARSRCSSSDAPSATVLVHPLDMLRYDDGSFDAAIALVLSTMGGLDILVNNAGVSTRSSAEETSLSVDQSVMATNFFGPVALTKAALCLLRQSPSRSPHIVVVNSAQGKLGLGMRTSYAASKHALTGYFDSLRAELSLESIPVTTVFPGYIRTDLSLNALTGRGEKYAQMDETTAKGLDPTRLAVKIFQAAAAGKQEVIFAPIDARAAIYLRNIIPHVVFRILARKAQKALRDRIPNESRREETKKKK
Sbjct: 1 MGNLLSFSSGPSIDNFLDGKVVWITGASSGLGKAMAIEAARRGARVILSARSIDKLKNVEQECLAVSPLKTSNASRSARSRCSSSDAPSATVLVHPLDMLRYDDGSFDAAIALVLSTMGGLDILVNNAGVSTRSSAEETSLSVDQSVMATNFFGPVALTKAALCLLRQSPSRSPHIVVVNSAQGKLGLGMRTSYAASKHALTGYFDSLRAELSLESIPVTTVFPGYIRTDLSLNALTGRGEKYAQMDETTAKGLDPTRLAVKIFQAAAAGKQEVIFAPIDARAAIYLRNIIPHVVFRILARKAQKALRDRIPNESRREETKKKK 324
BLAST of EWM24961.1 vs. NCBI_GenBank
Match: gi|657801777|ref|XP_008327993.1| (PREDICTED: dehydrogenase/reductase SDR family member 7B [Cynoglossus semilaevis] >gi|1035255282|ref|XP_016896009.1| PREDICTED: dehydrogenase/reductase SDR family member 7B [Cynoglossus semilaevis] >gi|1035255284|ref|XP_016896010.1| PREDICTED: dehydrogenase/reductase SDR family member 7B [Cynoglossus semilaevis]) HSP 1 Score: 219.164 bits (557), Expect = 5.455e-66 Identity = 131/304 (43.09%), Postives = 183/304 (60.20%), Query Frame = 0
Query: 17 LDGKVVWITGASSGLGKAMAIEAARRGARVILSARSIDKLKNVEQECLAVSPLKTSNASRSARSRCSSSDAPSATVLVHPLDMLRYDDGSFDAAIALVLSTMGGLDILVNNAGVSTRSSAEETSLSVDQSVMATNFFGPVALTKAAL-CLLRQSPSRSPHIVVVNSAQGKLGLGMRTSYAASKHALTGYFDSLRAELSLESIPVTTVFPGYIRTDLSLNALTGRGEKYAQMDETTAKGLDPTRLAVKIFQAAAAGKQEVIFAPIDARAAIYLRNIIPHVVFRILARKAQKALRDRIPNESRREE 319
L VV ITGASSGLGK A GAR++L R +L+ V QE A RSA ++ + P TV+ D+ D + D A+ +L G +D+L+NNAGVS R + +T LSV +SVM TN+FGP+ALT+A L +++Q RS HIVV++S QGK+ + R++YAASKHA YFD LRAE+ IPVT + PGYIRT+LS+NA+TG G KY +D+TTA G DP +A+ + +A ++V+ A A+YLR + P + FR++A +A K + R+EE
Sbjct: 35 LQDAVVVITGASSGLGKECARAFHAAGARLVLCGRDAGRLQEVAQELTA----------RSADTQKKTH--PPCTVI---FDLANTD--TMDRAVEQILKCHGRVDVLINNAGVSYRGNILDTDLSVQRSVMETNYFGPIALTQALLPAMVKQ---RSGHIVVISSVQGKIAIPYRSAYAASKHATQAYFDCLRAEIDHYGIPVTVISPGYIRTNLSVNAVTGDGSKYGVLDKTTATGRDPGDVALAVLRAVRQRSKDVVLAEPLPTLAVYLRTLWPTLFFRLMASRAHK-------EQKRKEE 311
BLAST of EWM24961.1 vs. NCBI_GenBank
Match: gi|470423322|ref|XP_004337586.1| (Dehydrogenase/reductase SDR family protein 7like, putative [Acanthamoeba castellanii str. Neff] >gi|440794412|gb|ELR15573.1| Dehydrogenase/reductase SDR family protein 7like, putative [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 217.238 bits (552), Expect = 1.316e-65 Identity = 126/287 (43.90%), Postives = 172/287 (59.93%), Query Frame = 0
Query: 17 LDGKVVWITGASSGLGKAMAIEAARRGARVILSARSIDKLKNVEQECLAVSPLKTSNASRSARSRCSSSDAPSATVLVHPLDMLRYDDGSFDAAIALVLSTMGGLDILVNNAGVSTRSSAEETSLSVDQSVMATNFFGPVALTKAALCLLRQSPSRSPHIVVVNSAQGKLGLGMRTSYAASKHALTGYFDSLRAELSLESIPVTTVFPGYIRTDLSLNALTGRGEKYAQMDETTAKGLDPTRLAVKIFQAAAAGKQEVIFAPIDARAAIYLRNIIPHVVFRILARKA 303
GKVVWITGASSGLG+A+A+E GAR+ILSAR D+L+ R + + PS V PLD+ S + + + G +D+L+NNAGVS L VDQ VM N+FG +ALTKA + + + + HIVV++S QGKLG+ R++YAASKHAL G+FDS R EL + I VT V PGYI+TDLSLNALTG G Y +MDETTAKG +P +A ++ QA + + E++ A DA A ++L+ + P ++ IL ++A
Sbjct: 31 FKGKVVWITGASSGLGEALALELQAAGARLILSARREDQLE-----------------------RTPAGEEPS----VLPLDVAEL--ASLEGKVKDATAIHGRIDVLINNAGVS---------LEVDQRVMNINYFGTIALTKALVPAMTKQTT-GGHIVVISSVQGKLGIPFRSAYAASKHALHGFFDSARFELEKQGIAVTLVCPGYIKTDLSLNALTGSGTSYGKMDETTAKGYEPAYVAQRVMQAVSEKRDEIMVAKPDATAGVFLKVLCPSLLKTILRKRA 278
BLAST of EWM24961.1 vs. NCBI_GenBank
Match: gi|498110434|ref|WP_010424590.1| (short chain dehydrogenase [Anaerophaga thermohalophila]) HSP 1 Score: 214.157 bits (544), Expect = 8.744e-65 Identity = 118/285 (41.40%), Postives = 175/285 (61.40%), Query Frame = 0
Query: 17 LDGKVVWITGASSGLGKAMAIEAARRGARVILSARSIDKLKNVEQECLAVSPLKTSNASRSARSRCSSSDAPSATVLVHPLDMLRYDDGSFDAAIALVLSTMGGLDILVNNAGVSTRSSAEETSLSVDQSVMATNFFGPVALTKAALCLLRQSPSRSPHIVVVNSAQGKLGLGMRTSYAASKHALTGYFDSLRAELSLESIPVTTVFPGYIRTDLSLNALTGRGEKYAQMDETTAKGLDPTRLAVKIFQAAAAGKQEVIFAPIDARAAIYLRNIIPHVVFRILAR 301
+ K +WITGASSG+G+A+A+ AR GA +ILS+R+++KL+ V++ CL + S C +V LD+ D GS D + V+ +GG+DIL+NNAG S RS A+ETS VD+S+M NFFG + LTK L + + + HIVVV+S GK G +RT+Y+ASKHA+ GYF+SLRAEL ++I VT V PG ++T++SLNA+TG G Y +MD+ A G+ P A KI +A +++++ + +Y+R P + RI+ +
Sbjct: 1 MKNKKIWITGASSGIGEALALALAREGADLILSSRNLEKLEKVKEACLKYT------------SFC----------MVQLLDL--SDTGSLDVVVENVMKKVGGIDILINNAGRSQRSLAKETSFDVDRSIMEINFFGVIKLTKLVLPYMLEKGT--GHIVVVSSITGKFGFPLRTAYSASKHAVQGYFESLRAELKADNIKVTIVSPGRVKTNISLNAVTGDGTPYRKMDDGQAGGMLPETCASKIVKAIKKERKDILVGNSEL-IMVYIRRFFPALYHRIVTK 258
BLAST of EWM24961.1 vs. NCBI_GenBank
Match: gi|470304606|ref|XP_004348163.1| (dehydrogenase/reductase SDR family member 7B [Capsaspora owczarzaki ATCC 30864] >gi|765552947|gb|KJE93568.1| dehydrogenase/reductase SDR family member 7B [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 216.083 bits (549), Expect = 8.757e-65 Identity = 130/304 (42.76%), Postives = 193/304 (63.49%), Query Frame = 0
Query: 15 NFLDGKVVWITGASSGLGKAMAIEAARRGARVILSARSIDKLKNVEQECLAVSPLKTSNASRSARSRCSSSDAPSATVLVHPLDMLRYDDGSFDAAIALVLSTMGGL-DILVNNAGVSTRSSAEETSLSVDQSVMATNFFGPVALTKAALCLLRQSPSRSPHIVVVNSAQGKLGLGMRTSYAASKHALTGYFDSLRAELSLESIPVTTVFPGYIRTDLSLNALTGRGEKYAQMDETTAKGLDPTRLAVKIFQAAAAGKQEVIFAPIDARAAIYLRNIIPHVVFRILARKAQKALR-DRIPNESR 316
++ GKVVW+TGASSG+G+A+A+E + GA +ILS+R +L+ V Q+C+A R P ++ LD+ D + +A +VL+ G+ D+L+NN+G+STR+S E+ ++ VM NFFG +TK L L + HI VV+S QGKLG+G R++YAASKHA+ GYFDSLRAE++ + VT PGY++T+LSLNALTG G + QMDETTAKG P+ +A K+ + A + E++ AP+DAR AI LR ++P ++ R++A++A+K R ++ P SR
Sbjct: 32 SYFRGKVVWLTGASSGIGEALAMELYKCGATLILSSRRTAELERVRQQCIA------------QRLPAGIPTPPEPRIVA--LDLAATPD-AIASATRIVLAQYSGVVDVLINNSGISTRASVLESQNEMEARVMQVNFFGAAQITK--LVLPGMLARGTGHIGVVSSVQGKLGIGFRSAYAASKHAVHGYFDSLRAEVAGRGLRVTLCCPGYVQTNLSLNALTGDGSAHGQMDETTAKGYKPSFVAEKMLSSMALNRTELVLAPLDARLAILLRYLLPDLLARLMAKRAEKQRRLEQAPAGSR 318
BLAST of EWM24961.1 vs. NCBI_GenBank
Match: gi|651642462|ref|WP_026628270.1| (short chain dehydrogenase [Dyadobacter alkalitolerans]) HSP 1 Score: 213.772 bits (543), Expect = 1.399e-64 Identity = 119/284 (41.90%), Postives = 173/284 (60.92%), Query Frame = 0
Query: 13 IDNFLDGKVVWITGASSGLGKAMAIEAARRGARVILSARSIDKLKNVEQECLAVSPLKTSNASRSARSRCSSSDAPSATVLVHPLDMLRYDDGSFDAAIALVLSTMGGLDILVNNAGVSTRSSAEETSLSVDQSVMATNFFGPVALTKAALCLLRQSPSRSPHIVVVNSAQGKLGLGMRTSYAASKHALTGYFDSLRAELSLESIPVTTVFPGYIRTDLSLNALTGRGEKYAQMDETTAKGLDPTRLAVKIFQAAAAGKQEVIFAPIDARAAIYLRNIIPHVVF 296
+D F + KVVWITGASSG+G+AMA+ A+ GA+++L+AR D+L+ V++ V+ L P +VLV P+D+ +D A V++ G +DI+V+NAGVS RS +T++ V Q +M NFF VALTKA L + Q RS H +V++S GK+G MR+ Y A+KHAL G++DSLRAE ++I VTT+ PGYIRT++SLNA+ G K+ +MD AKG+ A +I A K+E+ AAIYL+ +P+++F
Sbjct: 1 MDTF-NNKVVWITGASSGIGEAMALAFAKEGAKLVLTARREDELRRVKE----VTGL------------------PETSVLVLPMDVTLFDKAQ--GAAEQVIAHFGRIDIMVHNAGVSQRSYVNDTAMYVYQKLMNVNFFSTVALTKAVLPYMVQQ--RSGHFIVISSVAGKIGTIMRSGYNAAKHALHGFYDSLRAEGYSDNIKVTTICPGYIRTNISLNAMDASGSKFGKMDSNQAKGIPAEECARRILDAVKKDKKEIYIGGFKEVAAIYLKRFLPNLLF 257
BLAST of EWM24961.1 vs. NCBI_GenBank
Match: gi|584029372|ref|XP_006809198.1| (PREDICTED: dehydrogenase/reductase SDR family member 7B-like isoform X1 [Neolamprologus brichardi] >gi|584029374|ref|XP_006809199.1| PREDICTED: dehydrogenase/reductase SDR family member 7B-like isoform X2 [Neolamprologus brichardi]) HSP 1 Score: 214.927 bits (546), Expect = 2.287e-64 Identity = 124/290 (42.76%), Postives = 176/290 (60.69%), Query Frame = 0
Query: 17 LDGKVVWITGASSGLGKAMAIEAARRGARVILSARSIDKLKNVEQECLAVSPLKTSNASRSARSRCSSSDAPSATVLVHPLDMLRYDDGSFDAAIALVLSTMGGLDILVNNAGVSTRSSAEETSLSVDQSVMATNFFGPVALTKAAL-CLLRQSPSRSPHIVVVNSAQGKLGLGMRTSYAASKHALTGYFDSLRAELSLESIPVTTVFPGYIRTDLSLNALTGRGEKYAQMDETTAKGLDPTRLAVKIFQAAAAGKQEVIFAPIDARAAIYLRNIIPHVVFRILARKAQK 305
+ G VV ITGASSGLGK A GAR++L R +L+ V QE A S +++ P+ T D+ + D + + A +L G +DIL+NNAG+S R + ET +SV + VM TN+FGPVALT+A L ++RQ RS HIVV++S QGK+ + R++YAASKHA YFD LRAE+ IPVT + PGYIRT+LS+NA+TG G KY +D TTA G DP +A ++ +A ++V+ A AA+YLR + P + F++++ +A+K
Sbjct: 35 VQGVVVVITGASSGLGKECARVFHAAGARLVLCGRDAARLQQVVQELTASS---------------ANTQKPTHTPCTVVFDLAKTD--TVERAAEEILKCYGQVDILINNAGISYRGNILETHISVQRDVMETNYFGPVALTQALLPSMVRQ---RSGHIVVISSVQGKIAIPYRSAYAASKHATQAYFDCLRAEIERYGIPVTVISPGYIRTNLSVNAVTGDGSKYGVLDRTTATGWDPRDVAWEVLKAVRQRSKDVVLASPLPIAAVYLRTLWPALFFKLMSSRARK 304
BLAST of EWM24961.1 vs. NCBI_GenBank
Match: gi|1176368500|ref|WP_082215621.1| (short chain dehydrogenase [Dyadobacter psychrophilus] >gi|1154052917|emb|SKB94469.1| Short-chain dehydrogenase [Dyadobacter psychrophilus]) HSP 1 Score: 213.001 bits (541), Expect = 3.217e-64 Identity = 117/284 (41.20%), Postives = 174/284 (61.27%), Query Frame = 0
Query: 13 IDNFLDGKVVWITGASSGLGKAMAIEAARRGARVILSARSIDKLKNVEQECLAVSPLKTSNASRSARSRCSSSDAPSATVLVHPLDMLRYDDGSFDAAIALVLSTMGGLDILVNNAGVSTRSSAEETSLSVDQSVMATNFFGPVALTKAALCLLRQSPSRSPHIVVVNSAQGKLGLGMRTSYAASKHALTGYFDSLRAELSLESIPVTTVFPGYIRTDLSLNALTGRGEKYAQMDETTAKGLDPTRLAVKIFQAAAAGKQEVIFAPIDARAAIYLRNIIPHVVF 296
+D F D KVVWITGASSG+G+A+A+ A+ GA+++L+AR ++L+ V+Q S P +VLV PLD+ ++D A V++ G +DI+V+NAGVS RS +T+L V Q +M NFF VALTKA L + + +S H +V++S GK+G MR+ Y A+KHAL G++DSLRAE ++I VTT+ PGYIRT++SLNA+ G K+ +MD AKG+ A +I +A K+E+ + AAIY++ +P+++F
Sbjct: 1 MDTFND-KVVWITGASSGIGEAIALAFAKEGAKLVLTARREEELQRVKQ----------------------LSGLPDVSVLVLPLDVTQFDKAQ--GAAEQVIAHFGRIDIMVHNAGVSQRSYVNDTALDVYQKLMNVNFFSTVALTKAVLPYMVKQ--KSGHFIVISSVAGKIGTIMRSGYNAAKHALHGFYDSLRAEGYKDNIKVTTICPGYIRTNISLNAMDASGSKFGKMDSNQAKGIPAEECARRILEAVKKDKKEIYIGGLKEVAAIYVKRFLPNLLF 257
BLAST of EWM24961.1 vs. NCBI_GenBank
Match: gi|321472745|gb|EFX83714.1| (hypothetical protein DAPPUDRAFT_301603 [Daphnia pulex]) HSP 1 Score: 215.698 bits (548), Expect = 4.321e-64 Identity = 124/302 (41.06%), Postives = 178/302 (58.94%), Query Frame = 0
Query: 14 DNFLDGKVVWITGASSGLGKAMAIEAARRGARVILSARSIDKLKNVEQECLAVSPLKTSNASRSARSRCSSSDAPSATVLVHPLDMLRYDDGSFDA---AIALVLSTMGGLDILVNNAGVSTRSSAEETSLSVDQSVMATNFFGPVALTKAAL--CLLRQSPSRSPHIVVVNSAQGKLGLGMRTSYAASKHALTGYFDSLRAELSLESIPVTTVFPGYIRTDLSLNALTGRGEKYAQMDETTAKGLDPTRLAVKIFQAAAAGKQEVIFAPIDARAAIYLRNIIPHVVFRILARKAQKALRDR 310
D+ L+GKVV ITGASSGLG+A+A G ++I+++R +L V+++ L K + ++P ++ D D + +L G +DILVNNAG+S R +T+L VD +M N+FG + LTKA L ++RQS HIV++ S Q KL + R++YAASKHAL + DSLRAE+ +I VT + PGYIRT LSLNALTGRG+KY Q DETT G DP + A +I A QE++ + R A++LR I+P+V F+++AR+A K+ + R
Sbjct: 87 DSSLEGKVVLITGASSGLGEALAKCLYTEGCKLIIASRRYTELDRVKEQLLGSGLRKGT---------------------IYPPVIIELDLQDLDNLADKVRTILGVYGYVDILVNNAGISYRGEVTDTTLEVDAKIMNINYFGTIGLTKAILPSMIIRQSG----HIVMIGSLQSKLAIPFRSAYAASKHALQAFSDSLRAEIHRHNIDVTVINPGYIRTSLSLNALTGRGDKYGQTDETTESGADPLQAAYEIVIAIKEKTQELMLCSLFYRLAVFLRAILPNVYFKLMARRAAKSKKSR 363
BLAST of EWM24961.1 vs. NCBI_GenBank
Match: gi|1022761640|gb|KZS07561.1| (Dehydrogenase/reductase SDR family protein 7 [Daphnia magna]) HSP 1 Score: 215.698 bits (548), Expect = 4.811e-64 Identity = 129/299 (43.14%), Postives = 178/299 (59.53%), Query Frame = 0
Query: 14 DNFLDGKVVWITGASSGLGKAMAIEAARRGARVILSARSIDKLKNVEQECLAVSPLKTSNASRSARSRCSSSDAPSATVLVHPLDMLRYDDGSFDAAIALVLSTMGGLDILVNNAGVSTRSSAEETSLSVDQSVMATNFFGPVALTKAAL--CLLRQSPSRSPHIVVVNSAQGKLGLGMRTSYAASKHALTGYFDSLRAELSLESIPVTTVFPGYIRTDLSLNALTGRGEKYAQMDETTAKGLDPTRLAVKIFQAAAAGKQEVIFAPIDARAAIYLRNIIPHVVFRILARKAQKALRDR 310
D+ L+GKVV ITGASSGLG+A+A G ++I+++R +L V+++ L S L+ + P + + D + D + +L G +DILVNNAG+S R +TSL VD VM N+FG VALTKA L ++RQS HIV++ S Q KL + R++YAASKHAL + DSLRAE+ +I VT V PGYIRT LS+NALTGRG+KY QMDETT G DP + A +I A QE++ + R A+ R I+P V F+++AR+A +A + R
Sbjct: 87 DSSLEGKVVLITGASSGLGEALAKCLYTEGCKLIIASRRYTELDRVKEQLLG-SGLR------------KGTIYPPVIIQLDLQDFVNLPD-----KVRTILGVYGYIDILVNNAGISYRGEVTDTSLEVDAKVMNINYFGTVALTKALLPSMIVRQSG----HIVMIGSLQAKLAIPFRSAYAASKHALQAFSDSLRAEVDHRNIDVTVVNPGYIRTSLSVNALTGRGDKYGQMDETTESGTDPLQAAYQIVIAIKRKTQELMLCSVFYRLAVLFRAILPSVYFKMMARRALRAKKIR 363 The following BLAST results are available for this feature:
BLAST of EWM24961.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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