EWM24990.1, cds5691 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24990.1 vs. NCBI_GenBank
Match: gi|585106622|gb|EWM24989.1| (intraflagellar transport protein 88 [Nannochloropsis gaditana] >gi|585106623|gb|EWM24990.1| intraflagellar transport protein 88 [Nannochloropsis gaditana]) HSP 1 Score: 1328.92 bits (3438), Expect = 0.000e+0 Identity = 651/651 (100.00%), Postives = 651/651 (100.00%), Query Frame = 0 Query: 1 MSEEDHSPSYVARRRPRPPQHPPPPSGAPPLHSAAYRASRRGPTEAKIATKQSRKDAKVATPPLTAVSGAGYGRQVGPLIASAGDHKSQPDKPAFPSVHRTFLPDPAVQSTGASKPSTVSLVPTQDDKPEAVARCLETQVHALLEASAFASRSGQLGLALNKAKEAQKKERALTRARESSNLVDAMNGELTYAVALHLGSMYEGNGMEDEALHVYRGLLEQRALLPPVAGWARLNMGNVYYRKGRYAEAVKMYRMTLDQIPSTSHKAMRLKVYRNIGYAFVRLQEWQEAVQALEIIVLNPITHLNGERAGTAGEDGMGGALVGSQGGGQGAGGNKAGLSRSQADPTIVLPSSAAFSTSLLGSPRTVVFGDYFRTAYLLLMCYLVLGEVVKMKRAFAKMVSTLPTPLEEDEDIEEEAAAEKEGGARQVCGPGGGVERDDEMELWEAAAGGRRTRKRETENTARDAEEQVKPDFLREEMQRRRQEGVRYVLAAGKLLAPVVEATGGRDGYQWVVEALKRGNHGEVACLMELERASACVREKRFDPAVEILRSFERKEIPVKAWAASSLSFVYFLEGELEKAEELANLAVEHNSYNASALVNKANCVFQRGDVGAAKDLYLEALGVEAGCLEGESRGECFTSKTPCLVARGVVL 651 MSEEDHSPSYVARRRPRPPQHPPPPSGAPPLHSAAYRASRRGPTEAKIATKQSRKDAKVATPPLTAVSGAGYGRQVGPLIASAGDHKSQPDKPAFPSVHRTFLPDPAVQSTGASKPSTVSLVPTQDDKPEAVARCLETQVHALLEASAFASRSGQLGLALNKAKEAQKKERALTRARESSNLVDAMNGELTYAVALHLGSMYEGNGMEDEALHVYRGLLEQRALLPPVAGWARLNMGNVYYRKGRYAEAVKMYRMTLDQIPSTSHKAMRLKVYRNIGYAFVRLQEWQEAVQALEIIVLNPITHLNGERAGTAGEDGMGGALVGSQGGGQGAGGNKAGLSRSQADPTIVLPSSAAFSTSLLGSPRTVVFGDYFRTAYLLLMCYLVLGEVVKMKRAFAKMVSTLPTPLEEDEDIEEEAAAEKEGGARQVCGPGGGVERDDEMELWEAAAGGRRTRKRETENTARDAEEQVKPDFLREEMQRRRQEGVRYVLAAGKLLAPVVEATGGRDGYQWVVEALKRGNHGEVACLMELERASACVREKRFDPAVEILRSFERKEIPVKAWAASSLSFVYFLEGELEKAEELANLAVEHNSYNASALVNKANCVFQRGDVGAAKDLYLEALGVEAGCLEGESRGECFTSKTPCLVARGVVL Sbjct: 1 MSEEDHSPSYVARRRPRPPQHPPPPSGAPPLHSAAYRASRRGPTEAKIATKQSRKDAKVATPPLTAVSGAGYGRQVGPLIASAGDHKSQPDKPAFPSVHRTFLPDPAVQSTGASKPSTVSLVPTQDDKPEAVARCLETQVHALLEASAFASRSGQLGLALNKAKEAQKKERALTRARESSNLVDAMNGELTYAVALHLGSMYEGNGMEDEALHVYRGLLEQRALLPPVAGWARLNMGNVYYRKGRYAEAVKMYRMTLDQIPSTSHKAMRLKVYRNIGYAFVRLQEWQEAVQALEIIVLNPITHLNGERAGTAGEDGMGGALVGSQGGGQGAGGNKAGLSRSQADPTIVLPSSAAFSTSLLGSPRTVVFGDYFRTAYLLLMCYLVLGEVVKMKRAFAKMVSTLPTPLEEDEDIEEEAAAEKEGGARQVCGPGGGVERDDEMELWEAAAGGRRTRKRETENTARDAEEQVKPDFLREEMQRRRQEGVRYVLAAGKLLAPVVEATGGRDGYQWVVEALKRGNHGEVACLMELERASACVREKRFDPAVEILRSFERKEIPVKAWAASSLSFVYFLEGELEKAEELANLAVEHNSYNASALVNKANCVFQRGDVGAAKDLYLEALGVEAGCLEGESRGECFTSKTPCLVARGVVL 651
BLAST of EWM24990.1 vs. NCBI_GenBank
Match: gi|553190484|ref|XP_005855201.1| (intraflagellar transport 88-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293861|gb|EKU21161.1| intraflagellar transport 88-like protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 249.595 bits (636), Expect = 1.216e-76 Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0 Query: 163 AKEAQKKERALTRARESSNLVDAMNGELTYAVALHLGSMYEGNGMEDEALHVYRGLLEQRALLPPVAGWARLNMGNVYYRKGRYAEAVKMYRMTLDQIPSTSHKAMRLKVYRNIGYAFVR 282 AKEAQKKERALTRARESSNLVDAMNGELTYAVALHLGSMYEGNGMEDEALHVYRGLLEQRALLPPVAGWARLNMGNVYYRKGRYAEA+KMYRMTLDQIPSTSHKAMRLKVYRNIGYAFVR Sbjct: 1 AKEAQKKERALTRARESSNLVDAMNGELTYAVALHLGSMYEGNGMEDEALHVYRGLLEQRALLPPVAGWARLNMGNVYYRKGRYAEAIKMYRMTLDQIPSTSHKAMRLKVYRNIGYAFVR 120
BLAST of EWM24990.1 vs. NCBI_GenBank
Match: gi|676388029|ref|XP_009037293.1| (hypothetical protein AURANDRAFT_10223, partial [Aureococcus anophagefferens] >gi|323452044|gb|EGB07919.1| hypothetical protein AURANDRAFT_10223, partial [Aureococcus anophagefferens]) HSP 1 Score: 216.853 bits (551), Expect = 2.124e-58 Identity = 184/568 (32.39%), Postives = 261/568 (45.95%), Query Frame = 0 Query: 63 PLTAVSGAGYGRQVGPLIASAGDHKSQPDKPAFPSVHRTFLPDPAVQSTGASKPSTVSLVPTQDDKPEAVARCLETQVHALLEASAFASRSGQLGLALNKAKEAQKKERALTRARESSNLVDAMNGELTYAVALHLGSMYEGNGMEDEALHVYRGLLEQRALLPPVAGWARLNMGNVYYRKGRYAEAVKMYRMTLDQIPSTSHKAMRLKVYRNIGYAFVRLQEWQEAVQALEIIVLNPITHLNGERAGTAGEDGMGGALVGSQGGGQGAGGNKAGLSRSQADPTIVLPSSAAFSTSLLGSPRTVVFGDYFRTAYLLLMCYLVLGEVVKMKRAFAKMVSTLPTPLEEDEDIEEEAAAEKEGGARQVCGPGGGVERDDEMELWEAAAGGRRTRKRETENTARDAEEQVKPDFLREEMQRRRQEGVRYVLAAGKLLAPVVEA-TGGRDGYQWVVEALKRGNHGEVACLMELERASACVREKRFDPAVEILRSFERKEIPVKAWAASSLSFVYFLEGELEKAEELANLAVEHNSYNASALVNKANCVFQRGDVGAAKDLYLEALGVEAGCLE 629 P+T+ SGAG+ + G A R F DP Q G + P L D+ PE AR E QVHAL+EASA A+ G AL KAK+A K+ERAL + RE+ LVD +N +LTYAV +L Y M DEALH Y L++ + Q P + RL+V N+G + Q++Q A++ + L+ I + G+ +G A V G ++ T + G P F T + L++CY LG+ KM+R F K++S PL GG +DD + T + AR D LR E++RR +E Y+L A +L+AP ++A GY+ +++ALK +H +A ME+ERA +R K FD A+E L++FE+K+ +KA AA++LSF+YFLEG+L AE A+LA E + YNA ALVNK NC+ + + AK YLEA+GVEA C+E Sbjct: 7 PMTSTSGAGFSTKQGGAAA------------------RGF--DPLGQGRGPAPP----LAERADNSPEDQAREFEKQVHALVEASAAAALEGNHDAALEKAKDAGKRERALCKHREAHGLVDQINIDLTYAVCFNLAHAYHSARMHDEALHTYSLLVKNK------------------------------------QYPQSG----RLRV--NMGNIYYEQQKYQTAIKMYRMAALDQIPN-TGKHIRFKIFRNIGNAFVRLGQFGDAV---------------------QSYETIMGGDPD-------FHTGFNLILCYYALGDAEKMRRGFQKLISI---PL-----------------------ASGGDAKDD-------------AKATATRDLAR-------ADGLRHELKRREKEAHGYMLTAARLIAPELKAPDDAMVGYRLIIDALK-PDHELLASEMEIERALKYMRNKDFDKAIEALKAFEKKDQHLKAMAATNLSFIYFLEGDLRAAERYADLAYEQDRYNARALVNKGNCLTVKHEHETAKQFYLEAIGVEADCVE 432
BLAST of EWM24990.1 vs. NCBI_GenBank
Match: gi|567961687|gb|ETK87224.1| (hypothetical protein L915_08299 [Phytophthora parasitica] >gi|567990418|gb|ETL40648.1| hypothetical protein L916_08224 [Phytophthora parasitica] >gi|570951843|gb|ETP17100.1| hypothetical protein F441_08446 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 216.853 bits (551), Expect = 8.132e-57 Identity = 168/590 (28.47%), Postives = 271/590 (45.93%), Query Frame = 0 Query: 46 AKIATKQSRKDAKVATPPLTAVSGAGYGRQVGPLIASAGDHKSQPDKPAFPSVHRTFLPDPAVQSTGASKPSTVSLVPTQDDKPEAVARCLETQVHALLEASAFASRSGQLGLALNKAKEAQKKERALTRARESSNLVDAMNGELTYAVALHLGSMYEGNGMEDEALHVYRGLLEQRALLPPVAGWARLNMGNVYYRKGRYAEAVKMYRMTLDQIPSTSHKAM----RLKVYRNIGYAFVRLQEWQEAVQALEIIVLNPITHLNGERAGTAGEDGMGGALVGSQGGGQGAGGNKAGLSRSQADPTIVLPSSAAFSTSLLGSPRTVVFGDYFRTAYLLLMCYLVLGEVVKMKRAFAKMVSTLPTP--LEEDEDIEEEAAAEKEGGARQVCGPGGGVERDDEMELWEAAAGGRRTRKRETENTARDAEEQVKPDFLREEMQRRRQEGVRYVLAAGKLLAPVVEATGGRDGYQWVVEALKRGNHGEVACLMELERASACVREKRFDPAVEILRSFERKEIPVKAWAASSLSFVYFLEGELEKAEELANLAVEHNSYNASALVNKANCVFQRGDVGAAKDLYLEALGVEAGCLE 629 +++ T Q DA+ P+T+VSGAG+ P R F P + GA+ +LV ++ P+ VA+ LE V+AL+E SA Q AL+ AK+A +KERA + E + L D +N +LTYAV N+ N Y+ G + EA++ Y P +K RL+V N+G + Q++ A++ + L+ I + + E + +GGA + G Q A + AD F++ + L++CY +GE KM+R F ++ T+P EEDED E+ +T ++++ +K D L+ E++ RR++ + Y+L A KL AP ++ G+ WV++ALK+ NH +A ME+ +A ++EK FD A+E+L++FE+K+ KA AA++LS++YF+EG+ +A++ A+LAV H YNA ALVNK NC++ + + AK+L+LEA+GVEA C+E Sbjct: 81 SRMGTAQQSSDAR----PMTSVSGAGFS-----------------SNPRTAGGQRMFDPMGESRKAGAAP----ALVEKTENSPKEVAKELERTVNALIEQSAELIAKEQYEEALHSAKDAGRKERAFNKHCELNGLADMLNIDLTYAVFF--------------------------------------NLANAYHLNGLWKEAIQSY------TPIVKNKQYAQGGRLRV--NMGNIYFEQQQYPTAIRMYRM-ALDQIPNTSKEVRYKIKRN-IGGAQI-KLGHYQDAAATFEDIMEGNAD---------------------------FQSGFNLIICYYAIGEHEKMRRGFTNLI-TIPMEGMSEEDED--------------------------------ESGLANESKHNDDTHTSSKEHLHSLKTDGLKAEIRARRKKAMEYILVAAKLCAPALDKKDWLAGFTWVIDALKQENHESLASEMEICKAHWFLKEKEFDKAIEVLKAFEKKDPAHKAMAATNLSYLYFVEGDTAQADKYASLAVRHQRYNAKALVNKGNCLYVKNECERAKELFLEAIGVEADCIE 536
BLAST of EWM24990.1 vs. NCBI_GenBank
Match: gi|570328048|gb|ETO75996.1| (hypothetical protein F444_08524 [Phytophthora parasitica P1976]) HSP 1 Score: 216.468 bits (550), Expect = 9.509e-57 Identity = 168/590 (28.47%), Postives = 271/590 (45.93%), Query Frame = 0 Query: 46 AKIATKQSRKDAKVATPPLTAVSGAGYGRQVGPLIASAGDHKSQPDKPAFPSVHRTFLPDPAVQSTGASKPSTVSLVPTQDDKPEAVARCLETQVHALLEASAFASRSGQLGLALNKAKEAQKKERALTRARESSNLVDAMNGELTYAVALHLGSMYEGNGMEDEALHVYRGLLEQRALLPPVAGWARLNMGNVYYRKGRYAEAVKMYRMTLDQIPSTSHKAM----RLKVYRNIGYAFVRLQEWQEAVQALEIIVLNPITHLNGERAGTAGEDGMGGALVGSQGGGQGAGGNKAGLSRSQADPTIVLPSSAAFSTSLLGSPRTVVFGDYFRTAYLLLMCYLVLGEVVKMKRAFAKMVSTLPTP--LEEDEDIEEEAAAEKEGGARQVCGPGGGVERDDEMELWEAAAGGRRTRKRETENTARDAEEQVKPDFLREEMQRRRQEGVRYVLAAGKLLAPVVEATGGRDGYQWVVEALKRGNHGEVACLMELERASACVREKRFDPAVEILRSFERKEIPVKAWAASSLSFVYFLEGELEKAEELANLAVEHNSYNASALVNKANCVFQRGDVGAAKDLYLEALGVEAGCLE 629 +++ T Q DA+ P+T+VSGAG+ P R F P + GA+ +LV ++ P+ VA+ LE V+AL+E SA Q AL+ AK+A +KERA + E + L D +N +LTYAV N+ N Y+ G + EA++ Y P +K RL+V N+G + Q++ A++ + L+ I + + E + +GGA + G Q A + AD F++ + L++CY +GE KM+R F ++ T+P EEDED E+ +T ++++ +K D L+ E++ RR++ + Y+L A KL AP ++ G+ WV++ALK+ NH +A ME+ +A ++EK FD A+E+L++FE+K+ KA AA++LS++YF+EG+ +A++ A+LAV H YNA ALVNK NC++ + + AK+L+LEA+GVEA C+E Sbjct: 81 SRMGTAQQSSDAR----PMTSVSGAGFS-----------------SNPRSAGGQRMFDPMGESRKAGAAP----ALVEKTENSPKEVAKELERTVNALIEQSAELIAKEQYEEALHSAKDAGRKERAFNKHCELNGLADMLNIDLTYAVFF--------------------------------------NLANAYHLNGLWKEAIQSY------TPIVKNKQYAQGGRLRV--NMGNIYFEQQQYPTAIRMYRM-ALDQIPNTSKEVRYKIKRN-IGGAQI-KLGHYQDAAATFEDIMEGNAD---------------------------FQSGFNLIICYYAIGEHEKMRRGFTNLI-TIPMEGMSEEDED--------------------------------ESGLANESKHNDDTHTSSKEHLHSLKTDGLKAEIRARRKKAMEYILVAAKLCAPALDKKDWLAGFTWVIDALKQENHESLASEMEICKAHWFLKEKEFDKAIEVLKAFEKKDPAHKAMAATNLSYLYFVEGDTAQADKYASLAVRHQRYNAKALVNKGNCLYVKNECERAKELFLEAIGVEADCIE 536
BLAST of EWM24990.1 vs. NCBI_GenBank
Match: gi|566024414|gb|ETI47325.1| (hypothetical protein F443_08467 [Phytophthora parasitica P1569] >gi|568050069|gb|ETM47029.1| hypothetical protein L914_08187 [Phytophthora parasitica]) HSP 1 Score: 216.468 bits (550), Expect = 1.018e-56 Identity = 168/590 (28.47%), Postives = 271/590 (45.93%), Query Frame = 0 Query: 46 AKIATKQSRKDAKVATPPLTAVSGAGYGRQVGPLIASAGDHKSQPDKPAFPSVHRTFLPDPAVQSTGASKPSTVSLVPTQDDKPEAVARCLETQVHALLEASAFASRSGQLGLALNKAKEAQKKERALTRARESSNLVDAMNGELTYAVALHLGSMYEGNGMEDEALHVYRGLLEQRALLPPVAGWARLNMGNVYYRKGRYAEAVKMYRMTLDQIPSTSHKAM----RLKVYRNIGYAFVRLQEWQEAVQALEIIVLNPITHLNGERAGTAGEDGMGGALVGSQGGGQGAGGNKAGLSRSQADPTIVLPSSAAFSTSLLGSPRTVVFGDYFRTAYLLLMCYLVLGEVVKMKRAFAKMVSTLPTP--LEEDEDIEEEAAAEKEGGARQVCGPGGGVERDDEMELWEAAAGGRRTRKRETENTARDAEEQVKPDFLREEMQRRRQEGVRYVLAAGKLLAPVVEATGGRDGYQWVVEALKRGNHGEVACLMELERASACVREKRFDPAVEILRSFERKEIPVKAWAASSLSFVYFLEGELEKAEELANLAVEHNSYNASALVNKANCVFQRGDVGAAKDLYLEALGVEAGCLE 629 +++ T Q DA+ P+T+VSGAG+ P R F P + GA+ +LV ++ P+ VA+ LE V+AL+E SA Q AL+ AK+A +KERA + E + L D +N +LTYAV N+ N Y+ G + EA++ Y P +K RL+V N+G + Q++ A++ + L+ I + + E + +GGA + G Q A + AD F++ + L++CY +GE KM+R F ++ T+P EEDED E+ +T ++++ +K D L+ E++ RR++ + Y+L A KL AP ++ G+ WV++ALK+ NH +A ME+ +A ++EK FD A+E+L++FE+K+ KA AA++LS++YF+EG+ +A++ A+LAV H YNA ALVNK NC++ + + AK+L+LEA+GVEA C+E Sbjct: 81 SRMGTAQQSSDAR----PMTSVSGAGFS-----------------SNPRTAGGQRMFDPMGESRKAGAAP----ALVEKTENSPKEVAKELERTVNALIEQSAELIAKEQYEEALHSAKDAGRKERAFNKHCELNGLADMLNIDLTYAVFF--------------------------------------NLANAYHLNGLWKEAIQSY------TPIVKNKQYAQGGRLRV--NMGNIYFEQQQYPTAIRMYRM-ALDQIPNTSKEVRYKIKRN-IGGAQI-KLGHYQDAAATFEDIMEGNAD---------------------------FQSGFNLIICYYAIGEHEKMRRGFTNLI-TIPMEGMSEEDED--------------------------------ESGLANESKHNDDTHTSSKEHLHSLKTDGLKAEIRARRKKAMEYILVAAKLCAPALDKKDWLAGFTWVIDALKQENHESLASEMEICKAHWFLKEKEFDKAIEVLKAFEKKDPAHKAMAATNLSYLYFVEGDTAQADKYASLAVRHQRYNAKALVNKGNCLYVKNECERAKELFLEAIGVEADCIE 536
BLAST of EWM24990.1 vs. NCBI_GenBank
Match: gi|568019653|gb|ETL93796.1| (hypothetical protein L917_08122 [Phytophthora parasitica]) HSP 1 Score: 216.083 bits (549), Expect = 1.676e-56 Identity = 168/590 (28.47%), Postives = 271/590 (45.93%), Query Frame = 0 Query: 46 AKIATKQSRKDAKVATPPLTAVSGAGYGRQVGPLIASAGDHKSQPDKPAFPSVHRTFLPDPAVQSTGASKPSTVSLVPTQDDKPEAVARCLETQVHALLEASAFASRSGQLGLALNKAKEAQKKERALTRARESSNLVDAMNGELTYAVALHLGSMYEGNGMEDEALHVYRGLLEQRALLPPVAGWARLNMGNVYYRKGRYAEAVKMYRMTLDQIPSTSHKAM----RLKVYRNIGYAFVRLQEWQEAVQALEIIVLNPITHLNGERAGTAGEDGMGGALVGSQGGGQGAGGNKAGLSRSQADPTIVLPSSAAFSTSLLGSPRTVVFGDYFRTAYLLLMCYLVLGEVVKMKRAFAKMVSTLPTP--LEEDEDIEEEAAAEKEGGARQVCGPGGGVERDDEMELWEAAAGGRRTRKRETENTARDAEEQVKPDFLREEMQRRRQEGVRYVLAAGKLLAPVVEATGGRDGYQWVVEALKRGNHGEVACLMELERASACVREKRFDPAVEILRSFERKEIPVKAWAASSLSFVYFLEGELEKAEELANLAVEHNSYNASALVNKANCVFQRGDVGAAKDLYLEALGVEAGCLE 629 +++ T Q DA+ P+T+VSGAG+ P R F P + GA+ +LV ++ P+ VA+ LE V+AL+E SA Q AL+ AK+A +KERA + E + L D +N +LTYAV N+ N Y+ G + EA++ Y P +K RL+V N+G + Q++ A++ + L+ I + + E + +GGA + G Q A + AD F++ + L++CY +GE KM+R F ++ T+P EEDED E+ +T ++++ +K D L+ E++ RR++ + Y+L A KL AP ++ G+ WV++ALK+ NH +A ME+ +A ++EK FD A+E+L++FE+K+ KA AA++LS++YF+EG+ +A++ A+LAV H YNA ALVNK NC++ + + AK+L+LEA+GVEA C+E Sbjct: 81 SRMGTAQQSSDAR----PMTSVSGAGFS-----------------SNPRTAGGQRMFDPMGESRKAGAAP----ALVEKTENSPKEVAKELERTVNALIEQSAELIAKEQYEEALHSAKDAGRKERAFNKHCELNGLADMLNIDLTYAVFF--------------------------------------NLANAYHLNGLWKEAIQSY------TPIVKNKQYAQGGRLRV--NMGNIYFEQQQYPTAIRMYRM-ALDQIPNTSKEVRYKIKRN-IGGAQI-KLGHYQDAAATFEDIMEGNAD---------------------------FQSGFNLIICYYAIGEHEKMRRGFTNLI-TIPMEGMSEEDED--------------------------------ESGLTNESKHNDDTHTSSKEHLHSLKTDGLKAEIRARRKKAMEYILVAAKLCAPALDKKDWLAGFTWVIDALKQENHESLASEMEICKAHWFLKEKEFDKAIEVLKAFEKKDPAHKAMAATNLSYLYFVEGDTAQADKYASLAVRHQRYNAKALVNKGNCLYVKNECERAKELFLEAIGVEADCIE 536
BLAST of EWM24990.1 vs. NCBI_GenBank
Match: gi|325179518|emb|CCA13915.1| (Intraflagellar Transport Protein 88 putative [Albugo laibachii Nc14]) HSP 1 Score: 215.312 bits (547), Expect = 2.636e-56 Identity = 186/632 (29.43%), Postives = 284/632 (44.94%), Query Frame = 0 Query: 23 PPPSGAPPLHSAAYRASR----------RGPTE-------AKIATKQSRKDAKVATPPLTAVSGAGYGRQVGPLIASAGDHKSQPDKPAFPSVHRTFLPDPAVQSTGASKPSTVSLV--PTQDDKPEAVARCLETQVHALLEASAFASRSGQLGLALNKAKEAQKKERALTRARESSNLVDAMNGELTYAVALHLGSMYEGNGMEDEALHVYRGLLEQRALLPPVAGWARLNMGNVYYRKGRYAEAVKMYRMTLDQIPSTSHKAMRLKVYRNIGYAFVRLQEWQEAVQALEIIVLNPITHLNGERAGTAGE------DGMGGALVGSQGGGQGAGGNKAGLSRSQADPTIVLPSSAAFSTSLLGSPRTVVFGDYFRTAYLLLMCYLVLGEVVKMKRAFAKMVSTLPTPLEEDEDIEEEAAAEKEGGARQVCGPGGGVERDDEMELWEAAAGGRRTRKRETENTARDAEEQVKPDFLREEMQRRRQEGVRYVLAAGKLLAPVVEATGGRDGYQWVVEALKRGNHGEVACLMELERASACVREKRFDPAVEILRSFERKEIPVKAWAASSLSFVYFLEGELEKAEELANLAVEHNSYNASALVNKANCVFQRGDVGAAKDLYLEALGVEAGCLE 629 PP +G P + +Y +SR RGPT +++ T R P+T+VSGAG+ KP S R F P G S+ S VSL ++ P+ VA+ +E VH+L+E SA A + + AL+ AK+A +KER T+ E+ NL D N ELT+AV L + + NGM + EA++ Y + T+ A RL+V N+G + Q++ A++ + L+ I GT+ E +G A + G Q A + S AD F+ + L++CY +GE KM+R F+ ++S I + + +E Q + L +A++GG K D L+ E++ RR++ Y+L A KL AP ++ GY W+++ALK+ NH +A ME+ +A +REK FD A+E+L++FE+K+ KA AA++LSF+YF+EG+ +A++ A +AV H YNA ALVNKANC+ + D AK+LYLEA+GVEA C+E Sbjct: 30 PPQTGEYPSY-GSYPSSRGGFNTPGTGYRGPTSMGRQGLASRLGTGSQR--GMDGARPMTSVSGAGFS-----------------SKPKTASGQRAFDP------LGDSRKSGVSLALRENNENSPKEVAKEMENGVHSLIEQSANAIQGHKYEEALHLAKDAGRKERQFTKYCETQNLSDLFNVELTFAVFFILANAFHLNGM--------------------------------------WKEAIQSYTSIVKNKQYTN--AGRLRV--NMGNIYFEEQQYPTAIRMYRM-ALDQI-------PGTSKEIRYRIKRNIGAAQI-KLGHYQDAASTFEDIMESNAD---------------------------FQAGFNLIVCYYAIGEHDKMRRGFSSLIS-----------IPMDTMSAEEEEEDQEQKTQLLLNSLSSESLTKASSGG----------------ALAKADGLKAEIRSRRKKATDYILVASKLCAPALDKKDWLAGYNWIIDALKQENHESLASEMEICKAHFFLREKDFDKAIEVLKAFEKKDAVHKAMAATNLSFLYFIEGDWSQADKYATMAVRHQRYNAKALVNKANCLCVKNDCERAKELYLEAIGVEADCIE 530
BLAST of EWM24990.1 vs. NCBI_GenBank
Match: gi|970616492|gb|KUF64658.1| (Intraflagellar Transport Protein 88 [Phytophthora nicotianae]) HSP 1 Score: 215.312 bits (547), Expect = 3.280e-56 Identity = 168/590 (28.47%), Postives = 270/590 (45.76%), Query Frame = 0 Query: 46 AKIATKQSRKDAKVATPPLTAVSGAGYGRQVGPLIASAGDHKSQPDKPAFPSVHRTFLPDPAVQSTGASKPSTVSLVPTQDDKPEAVARCLETQVHALLEASAFASRSGQLGLALNKAKEAQKKERALTRARESSNLVDAMNGELTYAVALHLGSMYEGNGMEDEALHVYRGLLEQRALLPPVAGWARLNMGNVYYRKGRYAEAVKMYRMTLDQIPSTSHKAM----RLKVYRNIGYAFVRLQEWQEAVQALEIIVLNPITHLNGERAGTAGEDGMGGALVGSQGGGQGAGGNKAGLSRSQADPTIVLPSSAAFSTSLLGSPRTVVFGDYFRTAYLLLMCYLVLGEVVKMKRAFAKMVSTLPTP--LEEDEDIEEEAAAEKEGGARQVCGPGGGVERDDEMELWEAAAGGRRTRKRETENTARDAEEQVKPDFLREEMQRRRQEGVRYVLAAGKLLAPVVEATGGRDGYQWVVEALKRGNHGEVACLMELERASACVREKRFDPAVEILRSFERKEIPVKAWAASSLSFVYFLEGELEKAEELANLAVEHNSYNASALVNKANCVFQRGDVGAAKDLYLEALGVEAGCLE 629 +++ T Q DA+ P+T+VSGAG+ P R F P + GA+ +LV ++ P+ VA+ LE V+AL+E SA Q AL+ AK+A +KERA + E + L D +N +LTYAV N+ N Y G + EA++ Y P +K RL+V N+G + Q++ A++ + L+ I + + E + +GGA + G Q A + AD F++ + L++CY +GE KM+R F ++ T+P EEDED E+ +T ++++ +K D L+ E++ RR++ + Y+L A KL AP ++ G+ WV++ALK+ NH +A ME+ +A ++EK FD A+E+L++FE+K+ KA AA++LS++YF+EG+ +A++ A+LAV H YNA ALVNK NC++ + + AK+L+LEA+GVEA C+E Sbjct: 81 SRMGTAQQSSDAR----PMTSVSGAGFS-----------------SNPRTAGGQRMFDPMGESRKAGAAP----ALVEKTENSPKEVAKELERTVNALIEQSAELIAKEQYEEALHSAKDAGRKERAFNKHCELNGLADMLNIDLTYAVFF--------------------------------------NLANAYXLNGLWKEAIQSY------TPIVKNKQYAQGGRLRV--NMGNIYFEQQQYPTAIRMYRM-ALDQIPNTSKEVRYKIKRN-IGGAQI-KLGHYQDAAATFEDIMEGNAD---------------------------FQSGFNLIICYYAIGEHEKMRRGFTNLI-TIPMEGMSEEDED--------------------------------ESGLANESKHNDDTHTSSKEHLHSLKTDGLKAEIRARRKKAMEYILVAAKLCAPALDKKDWLAGFTWVIDALKQENHESLASEMEICKAHWFLKEKEFDKAIEVLKAFEKKDPAHKAMAATNLSYLYFVEGDTAQADKYASLAVRHQRYNAKALVNKGNCLYVKNECERAKELFLEAIGVEADCIE 536
BLAST of EWM24990.1 vs. NCBI_GenBank
Match: gi|675192755|ref|XP_008905262.1| (hypothetical protein PPTG_11826 [Phytophthora parasitica INRA-310] >gi|568094653|gb|ETN09429.1| hypothetical protein PPTG_11826 [Phytophthora parasitica INRA-310]) HSP 1 Score: 214.927 bits (546), Expect = 3.771e-56 Identity = 167/590 (28.31%), Postives = 271/590 (45.93%), Query Frame = 0 Query: 46 AKIATKQSRKDAKVATPPLTAVSGAGYGRQVGPLIASAGDHKSQPDKPAFPSVHRTFLPDPAVQSTGASKPSTVSLVPTQDDKPEAVARCLETQVHALLEASAFASRSGQLGLALNKAKEAQKKERALTRARESSNLVDAMNGELTYAVALHLGSMYEGNGMEDEALHVYRGLLEQRALLPPVAGWARLNMGNVYYRKGRYAEAVKMYRMTLDQIPSTSHKAM----RLKVYRNIGYAFVRLQEWQEAVQALEIIVLNPITHLNGERAGTAGEDGMGGALVGSQGGGQGAGGNKAGLSRSQADPTIVLPSSAAFSTSLLGSPRTVVFGDYFRTAYLLLMCYLVLGEVVKMKRAFAKMVSTLPTP--LEEDEDIEEEAAAEKEGGARQVCGPGGGVERDDEMELWEAAAGGRRTRKRETENTARDAEEQVKPDFLREEMQRRRQEGVRYVLAAGKLLAPVVEATGGRDGYQWVVEALKRGNHGEVACLMELERASACVREKRFDPAVEILRSFERKEIPVKAWAASSLSFVYFLEGELEKAEELANLAVEHNSYNASALVNKANCVFQRGDVGAAKDLYLEALGVEAGCLE 629 +++ T Q DA+ P+T+VSGAG+ P R F P + GA+ +LV ++ P+ VA+ LE V+AL+E SA Q AL+ AK+A +KERA + E + L D +N +LTYAV N+ N Y+ G + EA++ Y P +K RL+V N+G + Q++ A++ + L+ I + + E + +GGA + G Q A + AD F++ + L++CY +GE KM+R F ++ T+P EEDED E+ +T ++++ +K D L+ E++ RR++ + Y+L A KL AP ++ G+ WV++ALK+ +H +A ME+ +A ++EK FD A+E+L++FE+K+ KA AA++LS++YF+EG+ +A++ A+LAV H YNA ALVNK NC++ + + AK+L+LEA+GVEA C+E Sbjct: 81 SRMGTAQQSSDAR----PMTSVSGAGFS-----------------SNPRTAGGQRMFDPMGESRKAGAAP----ALVEKTENSPKEVAKELERTVNALIEQSAELIAKEQYEEALHSAKDAGRKERAFNKHCELNGLADMLNIDLTYAVFF--------------------------------------NLANAYHLNGLWKEAIQSY------TPIVKNKQYAQGGRLRV--NMGNIYFEQQQYPTAIRMYRM-ALDQIPNTSKEVRYKIKRN-IGGAQI-KLGHYQDAAATFEDIMEGNAD---------------------------FQSGFNLIICYYAIGEHEKMRRGFTNLI-TIPMEGMSEEDED--------------------------------ESGLANESKHNDDTHTSSKEHLHSLKTDGLKAEIRARRKKAMEYILVAAKLCAPALDKKDWLAGFTWVIDALKQESHESLASEMEICKAHWFLKEKEFDKAIEVLKAFEKKDPAHKAMAATNLSYLYFVEGDTAQADKYASLAVRHQRYNAKALVNKGNCLYVKNECERAKELFLEAIGVEADCIE 536 The following BLAST results are available for this feature:
BLAST of EWM24990.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|