EWM24981.1, cds5690 (CDS) Nannochloropsis gaditana

Overview
NameEWM24981.1
Unique Namecds5690
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:632977..634836 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24981.1
Product60s ribosomal export protein
Orig transcript idgnl|cribi|Naga_100122g7.3568.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:632977..634836 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR007064NMD3
Homology
BLAST of EWM24981.1 vs. NCBI_GenBank
Match: gi|585106614|gb|EWM24981.1| (60s ribosomal export protein [Nannochloropsis gaditana])

HSP 1 Score: 1285.01 bits (3324), Expect = 0.000e+0
Identity = 619/619 (100.00%), Postives = 619/619 (100.00%), Query Frame = 0
Query:    1 MADVMAPIAPNQTPVAAICCMCAINIQPNPTNMCLQCLRTQVNIASGLSTRVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRLVDAGWIWTEPHSKRLKLKLTVQQEVMNGAVLQEAVVVEFVVRNQQCPDCQASYTIGAWKAIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGFADGMDFYFAERNQAARFTEFLETACPVRVKQSKKLVSQDDHSNVFNYKYTTIIEIVPVCKDDLVILPTKLAQNLGDIARLCLVLRVLNHLHLIDPLTGQTAEVSVEKYHKAGFEFRALLSASRLVEFMVLGSEPALAPTKTSAPARRSKRHRLAEVEVALMSDLGANDTRYRVFTHLGHILRAGDTVLGYLLATASLNSADADELETKTRAGLPDAVLVRKVYSNEGRIRPAWRLKKFEADEMEVVEAGNAEQEDRDLRDYRQQLEGDREMRRRVNMYKAGRPLPGGAEDTDHENAALGQKAGKTKGKVEKMTVVSAMGEGDGSTRLDERDRSTNEGLGEDVGEDDEEALRLDELLDDLELDDPDAPPDDHEAQVLVGDVSSTGIAGVSKDFAFTFQPKTRNDDRDGNHAKTKDEQDAEEIYKEL 619
            MADVMAPIAPNQTPVAAICCMCAINIQPNPTNMCLQCLRTQVNIASGLSTRVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRLVDAGWIWTEPHSKRLKLKLTVQQEVMNGAVLQEAVVVEFVVRNQQCPDCQASYTIGAWKAIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGFADGMDFYFAERNQAARFTEFLETACPVRVKQSKKLVSQDDHSNVFNYKYTTIIEIVPVCKDDLVILPTKLAQNLGDIARLCLVLRVLNHLHLIDPLTGQTAEVSVEKYHKAGFEFRALLSASRLVEFMVLGSEPALAPTKTSAPARRSKRHRLAEVEVALMSDLGANDTRYRVFTHLGHILRAGDTVLGYLLATASLNSADADELETKTRAGLPDAVLVRKVYSNEGRIRPAWRLKKFEADEMEVVEAGNAEQEDRDLRDYRQQLEGDREMRRRVNMYKAGRPLPGGAEDTDHENAALGQKAGKTKGKVEKMTVVSAMGEGDGSTRLDERDRSTNEGLGEDVGEDDEEALRLDELLDDLELDDPDAPPDDHEAQVLVGDVSSTGIAGVSKDFAFTFQPKTRNDDRDGNHAKTKDEQDAEEIYKEL
Sbjct:    1 MADVMAPIAPNQTPVAAICCMCAINIQPNPTNMCLQCLRTQVNIASGLSTRVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRLVDAGWIWTEPHSKRLKLKLTVQQEVMNGAVLQEAVVVEFVVRNQQCPDCQASYTIGAWKAIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGFADGMDFYFAERNQAARFTEFLETACPVRVKQSKKLVSQDDHSNVFNYKYTTIIEIVPVCKDDLVILPTKLAQNLGDIARLCLVLRVLNHLHLIDPLTGQTAEVSVEKYHKAGFEFRALLSASRLVEFMVLGSEPALAPTKTSAPARRSKRHRLAEVEVALMSDLGANDTRYRVFTHLGHILRAGDTVLGYLLATASLNSADADELETKTRAGLPDAVLVRKVYSNEGRIRPAWRLKKFEADEMEVVEAGNAEQEDRDLRDYRQQLEGDREMRRRVNMYKAGRPLPGGAEDTDHENAALGQKAGKTKGKVEKMTVVSAMGEGDGSTRLDERDRSTNEGLGEDVGEDDEEALRLDELLDDLELDDPDAPPDDHEAQVLVGDVSSTGIAGVSKDFAFTFQPKTRNDDRDGNHAKTKDEQDAEEIYKEL 619          
BLAST of EWM24981.1 vs. NCBI_GenBank
Match: gi|299472700|emb|CBN79871.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 525.783 bits (1353), Expect = 4.118e-178
Identity = 272/562 (48.40%), Postives = 361/562 (64.23%), Query Frame = 0
Query:   18 ICCMCAINIQPNPTNMCLQCLRTQVNIASGLSTRVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRLVDAGWIWTEPHSKRLKLKLTVQQEVMNGAVLQEAVVVEFVVRNQQCPDCQASYTIGAWKAIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGFADGMDFYFAERNQAARFTEFLETACPVRVKQSKKLVSQDDHSNVFNYKYTTIIEIVPVCKDDLVILPTKLAQNLGDIARLCLVLRVLNHLHLIDPLTGQTAEVSVEKYHKAGFEFRALLSASRLVEFMVLGSEPALAPTKTSAPAR--RSKRHRLAEVEVALMSDLGANDTRYRVFTHLGHILRAGDTVLGYLLATASLNSADADELETKTRAGLPDAVLVRKVYSNE-----GRIRPAWRLKKFE------ADEMEVVEAGNAEQEDRDLRDYRQQLEGDREMRRRVNMYKAGRPLPGGAEDTDHENAALGQKAGKTKGKVEKMTVVSAMGEGDGSTRLDERDRSTNEGLGEDVGEDDEEALRLDELLDDLELDDPDAPPDDHE 566
            +CCMC++ I PNPT+MC+ C+RTQV+I  G++T +TMHQCRGC +Y+      GW   + ESRELMAVCLRK++GL +++LVDA WIWTEPHS+RLK+KLTVQ+EV NGAVLQ+A+VV FVVRNQQC  C A++T   W A+VQVRQRVDHKRTF +LEQLILKHNAH+Q   IQ F DGMDFYF E++ +ARF +FLE   P +VK SKKLVS D+HSN+FN+ YT ++ +VPVCKDDLV+LP +LA++LG+I+RL +  R+ + +  +DPLT QTA+V+ EKY +  +EF +LLS++RLV ++VLG+EP     + SAP R  R ++ R+AEVE+A   DLG ND R    +HLGHILRAGDTVL Y +++A+L   +A       +  LPD VLVRKVY        G+    W+L + E           V E  +    ++D   + QQLE D++MRR+VN+YK G                              +    A  +GDG+    E                     RLDELLD + LD+ +A PD  E
Sbjct:   27 LCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLR----PGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTDNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWR--YEFPSLLSSTRLVPYVVLGTEPLPEKARPSAPRRGHRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLAYDVSSANLPEGEA---TGDLKGRLPDVVLVRKVYPRHDREGGGKADRHWKLGELEKDGGDGGGGGGVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQG------------------------------LAAKPAAADGDGAMEDVEEMDEEEV--------------RLDELLDAMTLDNANAGPDGEE 535          
BLAST of EWM24981.1 vs. NCBI_GenBank
Match: gi|1173933922|gb|OQR85458.1| (60S ribosomal export protein NMD3 [Achlya hypogyna])

HSP 1 Score: 497.278 bits (1279), Expect = 1.273e-167
Identity = 233/468 (49.79%), Postives = 323/468 (69.02%), Query Frame = 0
Query:    9 APNQTPVAAICCMCAINIQPNPTNMCLQCLRTQVNIASGLSTRVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRLVDAGWIWTEPHSKRLKLKLTVQQEVMNGAVLQEAVVVEFVVRNQQCPDCQASYTIGAWKAIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGFADGMDFYFAERNQAARFTEFLETACPVRVKQSKKLVSQDDHSNVFNYKYTTIIEIVPVCKDDLVILPTKLAQNLGDIARLCLVLRVLNHLHLIDPLTGQTAEVSVEKYHKAGFEFRALLSASRLVEFMVLGSEPALAPTKTSAPARRSKRHRLAEVEVALMSDLGANDTRYRVFTHLGHILRAGDTVLGYLLATASLNSADADELETKTRAGLPDAVLVRKVYSNEGRIRP-AWRLKKFEADEMEV-VEAGNAEQEDRDLRDYRQQLEGDREMRRRVNMYKA 474
             P++     +CCMCA+ I+ N  NMC+ CL+ QV++  G+   + MHQCRGCLK+        W   E ESREL+A+CL+K++GLN+++LVDAGW+WTEPHSKRLKLKLTVQ+EVMNGA+LQ++ VV F+VRNQQC +CQAS+T  +WKA+VQVRQ+VDHKRTF +LEQLILKH  H +   I+   DG+DF+F+ERN A RF +FL    P+++K +KKL+S D+HSN  NYK+T  +++  VCKDDLV LP KLA+ LG+I+ LCLV +V + +H+IDP T Q AE+  +KY +  + F+AL S+ +LVE+ VL S P   PT    P R +++ RLAE+E+   SD G NDTR++  THLG +L  GDT +GY L+T+  N AD   L+ +    LPD VLVRK +    + R   W+LK  E  E  V  +  +  + + D + +  +LE D+EMR ++N+YK 
Sbjct:    4 VPDELLPNILCCMCAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKW----SRPPWVAAELESRELLAICLKKISGLNKVKLVDAGWVWTEPHSKRLKLKLTVQKEVMNGAILQQSFVVTFIVRNQQCDECQASFTNQSWKAVVQVRQKVDHKRTFFYLEQLILKHRVHEKTTSIESHPDGVDFFFSERNHALRFVDFLSETVPIKLKTAKKLISADNHSNTENYKFTYAVDLATVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIDNDKYWR--YPFKALRSSKQLVEYTVLDSTPMQIPTLGGVPVRTNRKTRLAEMEIVRNSDFGVNDTRFQTTTHLGMLLNVGDTAMGYDLSTSVFNDADTKPLD-EAGITLPDVVLVRKQFLRRVQKRSRNWKLKNIEGIESAVPTKKADQNKTEMDYQHFLDELEDDKEMRSKINIYKV 464          
BLAST of EWM24981.1 vs. NCBI_GenBank
Match: gi|813110954|ref|XP_012195053.1| (hypothetical protein SPRG_01450 [Saprolegnia parasitica CBS 223.65] >gi|641540498|gb|KDO34280.1| hypothetical protein SPRG_01450 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 496.893 bits (1278), Expect = 1.791e-167
Identity = 232/468 (49.57%), Postives = 322/468 (68.80%), Query Frame = 0
Query:    9 APNQTPVAAICCMCAINIQPNPTNMCLQCLRTQVNIASGLSTRVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRLVDAGWIWTEPHSKRLKLKLTVQQEVMNGAVLQEAVVVEFVVRNQQCPDCQASYTIGAWKAIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGFADGMDFYFAERNQAARFTEFLETACPVRVKQSKKLVSQDDHSNVFNYKYTTIIEIVPVCKDDLVILPTKLAQNLGDIARLCLVLRVLNHLHLIDPLTGQTAEVSVEKYHKAGFEFRALLSASRLVEFMVLGSEPALAPTKTSAPARRSKRHRLAEVEVALMSDLGANDTRYRVFTHLGHILRAGDTVLGYLLATASLNSADADELETKTRAGLPDAVLVRKVYSNEGRIRP-AWRLKKFEADEMEV-VEAGNAEQEDRDLRDYRQQLEGDREMRRRVNMYKA 474
             P Q+    +CCMCA+ I+ N  NMC+ CL+ QV++  G+   + MHQCRGCLK+        W   E ESREL+A+CL+K++GLN+++LVDAGW+WTEPHSKRLKLKLTVQ+EVMNGA+LQ++ VV F+VRNQQC +CQAS+T  +WKA+VQVRQ+VDHKRTF +LEQLILKH  H +   I+   DG+DF+F ERN A RF +FL    P+++K +KKL+S D+HSN  NYK+T  +++  VCKDDLV LP KLA+ LG+I+ LC+V +V + +H+IDP T Q AE+  +KY +  + F+AL S+ +LVE+ VL S P   PT    P R +++ RLAE+E+   SD G NDTR++  THLG +L  GDT +GY L+T+  N +D   L+ +    LPD +LVRK +    + R   W+LK  E  E  V V+     + + D + +  +LE D+EMR ++N+YK 
Sbjct:    4 VPEQSLPNILCCMCAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKW----SRPPWVAAELESRELLAICLKKISGLNKVKLVDAGWVWTEPHSKRLKLKLTVQKEVMNGAILQQSFVVTFIVRNQQCDECQASFTNNSWKAVVQVRQKVDHKRTFFYLEQLILKHRVHEKTSSIESHPDGVDFFFVERNHALRFVDFLSETVPIKLKTAKKLISADNHSNTANYKFTYAVDLATVCKDDLVALPLKLARQLGNISSLCIVTQVASSIHVIDPFTMQRAEIDNDKYWR--YPFKALRSSKQLVEYTVLDSNPLQIPTLGGVPVRTNRKTRLAEMEIVRNSDFGVNDTRFQTTTHLGMLLNVGDTAMGYDLSTSVFNDSDTKPLD-EAGITLPDVILVRKQFLRRVQKRSRNWKLKNIEGIESAVPVKKAEQTKTEMDYQHFLDELEDDKEMRSKINIYKV 464          
BLAST of EWM24981.1 vs. NCBI_GenBank
Match: gi|669152714|ref|XP_008611919.1| (nonsense-mediated mRNA decay protein 3 [Saprolegnia diclina VS20] >gi|530736271|gb|EQC34513.1| nonsense-mediated mRNA decay protein 3 [Saprolegnia diclina VS20])

HSP 1 Score: 496.508 bits (1277), Expect = 2.699e-167
Identity = 232/468 (49.57%), Postives = 322/468 (68.80%), Query Frame = 0
Query:    9 APNQTPVAAICCMCAINIQPNPTNMCLQCLRTQVNIASGLSTRVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRLVDAGWIWTEPHSKRLKLKLTVQQEVMNGAVLQEAVVVEFVVRNQQCPDCQASYTIGAWKAIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGFADGMDFYFAERNQAARFTEFLETACPVRVKQSKKLVSQDDHSNVFNYKYTTIIEIVPVCKDDLVILPTKLAQNLGDIARLCLVLRVLNHLHLIDPLTGQTAEVSVEKYHKAGFEFRALLSASRLVEFMVLGSEPALAPTKTSAPARRSKRHRLAEVEVALMSDLGANDTRYRVFTHLGHILRAGDTVLGYLLATASLNSADADELETKTRAGLPDAVLVRKVYSNEGRIRP-AWRLKKFEADEMEV-VEAGNAEQEDRDLRDYRQQLEGDREMRRRVNMYKA 474
             P Q+    +CCMCA+ I+ N  NMC+ CL+ QV++  G+   + MHQCRGCLK+        W   E ESREL+A+CL+K++GLN+++LVDAGW+WTEPHSKRLKLKLTVQ+EVMNGA+LQ++ VV F+VRNQQC +CQAS+T  +WKA+VQVRQ+VDHKRTF +LEQLILKH  H +   I+   DG+DF+F ERN A RF +FL    P+++K +KKL+S D+HSN  NYK+T  +++  VCKDDLV LP KLA+ LG+I+ LC+V +V + +H+IDP T Q AE+  +KY +  + F+AL S+ +LVE+ VL S P   PT    P R +++ RLAE+E+   SD G NDTR++  THLG +L  GDT +GY L+T+  N +D   L+ +    LPD +LVRK +    + R   W+LK  E  E  V V+     + + D + +  +LE D+EMR ++N+YK 
Sbjct:    4 VPEQSLPNILCCMCAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKW----SRPPWVAAELESRELLAICLKKISGLNKVKLVDAGWVWTEPHSKRLKLKLTVQKEVMNGAILQQSFVVTFIVRNQQCDECQASFTNNSWKAVVQVRQKVDHKRTFFYLEQLILKHRVHEKTSSIESHPDGVDFFFVERNHALRFVDFLSETVPIKLKTAKKLISADNHSNTANYKFTYAVDLATVCKDDLVALPLKLARQLGNISSLCIVTQVTSSIHVIDPFTMQRAEIDNDKYWR--YPFKALRSSKQLVEYTVLDSNPLQIPTLGGVPVRTNRKTRLAEMEIVRNSDFGVNDTRFQTTTHLGMLLNVGDTAMGYDLSTSVFNDSDTKPLD-EAGITLPDVILVRKQFLRRVQKRSRNWKLKNIEGIESAVPVKKAEQTKTEMDYQHFLDELEDDKEMRSKINIYKV 464          
BLAST of EWM24981.1 vs. NCBI_GenBank
Match: gi|1173955629|gb|OQS02570.1| (60S ribosomal export protein NMD3 [Thraustotheca clavata])

HSP 1 Score: 493.041 bits (1268), Expect = 5.729e-166
Identity = 231/467 (49.46%), Postives = 320/467 (68.52%), Query Frame = 0
Query:    9 APNQTPVAAICCMCAINIQPNPTNMCLQCLRTQVNIASGLSTRVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRLVDAGWIWTEPHSKRLKLKLTVQQEVMNGAVLQEAVVVEFVVRNQQCPDCQASYTIGAWKAIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGFADGMDFYFAERNQAARFTEFLETACPVRVKQSKKLVSQDDHSNVFNYKYTTIIEIVPVCKDDLVILPTKLAQNLGDIARLCLVLRVLNHLHLIDPLTGQTAEVSVEKYHKAGFEFRALLSASRLVEFMVLGSEPALAPTKTSAPARRSKRHRLAEVEVALMSDLGANDTRYRVFTHLGHILRAGDTVLGYLLATASLNSADADELETKTRAGLPDAVLVRKVYSNEGRIRP-AWRLKKFEADEMEV-VEAGNAEQEDRDLRDYRQQLEGDREMRRRVNMYK 473
             P Q     +CCMCA+ I+ N  NMC+ CL+ QV++  G+   + MHQCRGCLK+        W   E ESREL+A+CL+K++GLN+++LVDAGWIWTEPHSKRLKLKLTVQ+EVMNGA+LQ++ VV F+VRNQQC +CQAS+T  +WKA+VQVRQ+VDHKRTF +LEQLILKH  H +   I+   DG+DF+F ERN A RF +FL    P+++K +KKL+S D+HSN  NYK+T  ++I  VCKDDLV LP KLA+ LG+I+ LC+V +V + +H+IDP T Q AE+  +KY +  + F+AL S+ +LV++ VL S P    T    P R +++ RLAE+EV   SD G NDTR+   +HLG IL  GDT +GY L+T+  N AD   LE +    LPD ++VRK +    + R   W+LK  E  E  + ++  +  +++ D + +  +LE D+ MR ++N+YK
Sbjct:    4 VPEQALPNILCCMCAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKW----SRPPWVAAELESRELLAICLKKISGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQSFVVTFIVRNQQCDECQASFTNNSWKAVVQVRQKVDHKRTFFYLEQLILKHRVHEKTTSIESHPDGVDFFFVERNHALRFVDFLHETVPIKLKTAKKLISADNHSNTANYKFTYAVDIATVCKDDLVALPLKLARQLGNISPLCIVTQVTSSIHVIDPFTMQRAEIDNDKYWR--YPFKALRSSKQLVDYTVLDSNPMQILTVGGVPVRTNRKTRLAEMEVVRNSDFGVNDTRFTTISHLGMILNVGDTAMGYDLSTSVFNDADTKPLE-EAGITLPDVIIVRKQFLRRVQKRSRNWKLKNIEGIESSIPLKKADQTKQEMDYQHFLDELEDDKNMRSKINIYK 463          
BLAST of EWM24981.1 vs. NCBI_GenBank
Match: gi|698781609|ref|XP_009823848.1| (hypothetical protein H257_02059 [Aphanomyces astaci] >gi|574121572|gb|ETV87049.1| hypothetical protein H257_02059 [Aphanomyces astaci])

HSP 1 Score: 488.419 bits (1256), Expect = 3.239e-164
Identity = 230/473 (48.63%), Postives = 318/473 (67.23%), Query Frame = 0
Query:    5 MAPIAPNQTPVAAICCMCAINIQPNPTNMCLQCLRTQVNIASGLSTRVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRLVDAGWIWTEPHSKRLKLKLTVQQEVMNGAVLQEAVVVEFVVRNQQCPDCQASYTIGAWKAIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGFADGMDFYFAERNQAARFTEFLETACPVRVKQSKKLVSQDDHSNVFNYKYTTIIEIVPVCKDDLVILPTKLAQNLGDIARLCLVLRVLNHLHLIDPLTGQTAEVSVEKYHKAGFEFRALLSASRLVEFMVLGSEPALAPTKTSAPARRSKRHRLAEVEVALMSDLGANDTRYRVFTHLGHILRAGDTVLGYLLATASLNSADADELETKTRAGLPDAVLVRKVYSNEGRIRP-AWRLKKFEADEMEV-VEAGNAEQEDRDLRDYRQQLEGDREMRRRVNMYKAG 475
            M+   P+      +CC+CA+ I+ N  NMC+ CL+ QV++  G+   + MHQCRGCLK+        W   + ESREL+A+CL+K+ GLN+++LVDAGWIWTEPHSKRLKLKLTVQ+EVMNGA+LQ++ +V F+VRNQQC DCQAS+T  +WKA+VQVRQ+V+HKRTF  LEQLILKH  H +   I+   DG+DF+F ERN A RF +FL+   P+ ++ +KKL+S D+HSN  NYK+T  ++I PVCKDDLV LP KLA+ LG+I+ LCLV +V + +H+IDP T Q AE+  +K+ +    F+AL S+ +L E+ VL S P   PTK   P R +++ RLA+++V   +D G NDT +   THLG +L  GDT +GY L+T+  N  D   L+ +    LPD +LVRK +    + R   W+LK  E  E  V ++  +  + D D   +   LE D+EMR R+N+YKA 
Sbjct:    1 MSVYVPDHELPDILCCICAVAIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKW----SRPQWVSADLESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQSFIVTFIVRNQQCDDCQASFTNHSWKAVVQVRQKVEHKRTFFFLEQLILKHRVHEKTTSIESQPDGVDFFFVERNHALRFVDFLQETVPISIRTAKKLISADNHSNTANYKFTYAVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVSSSIHVIDPFTMQRAEIDNDKFWRT--PFKALRSSKQLTEYTVLDSTPLEMPTKGGVPVRTNRKTRLADLDVVRNTDFGVNDTHFNTVTHLGMLLNVGDTAMGYDLSTSVFNDLDTKPLD-EAGISLPDVILVRKQFLRRVQKRTRKWKLKTIEGVEPAVPLKKADQTKHDLDYEHFLNDLEEDKEMRARINIYKAN 466          
BLAST of EWM24981.1 vs. NCBI_GenBank
Match: gi|673023090|ref|XP_008865506.1| (hypothetical protein H310_03429 [Aphanomyces invadans] >gi|574478734|gb|ETW05729.1| hypothetical protein H310_03429 [Aphanomyces invadans])

HSP 1 Score: 487.263 bits (1253), Expect = 1.052e-163
Identity = 229/459 (49.89%), Postives = 314/459 (68.41%), Query Frame = 0
Query:   18 ICCMCAINIQPNPTNMCLQCLRTQVNIASGLSTRVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRLVDAGWIWTEPHSKRLKLKLTVQQEVMNGAVLQEAVVVEFVVRNQQCPDCQASYTIGAWKAIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGFADGMDFYFAERNQAARFTEFLETACPVRVKQSKKLVSQDDHSNVFNYKYTTIIEIVPVCKDDLVILPTKLAQNLGDIARLCLVLRVLNHLHLIDPLTGQTAEVSVEKYHKAGFEFRALLSASRLVEFMVLGSEPALAPTKTSAPARRSKRHRLAEVEVALMSDLGANDTRYRVFTHLGHILRAGDTVLGYLLATASLNSADADELETKTRAGLPDAVLVRKVYSNEGRIRP-AWRLKKFEADEMEV-VEAGNAEQEDRDLRDYRQQLEGDREMRRRVNMYKA 474
            +CC+CA+ I+ N  NMC+ CL+ QV++  G+   + MHQCRGCLK+        W   + ESREL+A+CL+K+ GLN+++LVDAGWIWTEPHSKRLKLKLTVQ+EVMNGA+LQ++ +V F+VRNQQC DCQAS+T  +WKA+VQVRQ+V+HKRTF  LEQLILKH  H +   I+   DG+DF+F ERN A RF +FL+   P+ +K +KKL+S D+HSN  NYK+T  ++I PVCKDDLV LP KLA+ LG+I+ LCLV +V + +H+IDP T Q AE+  +KY +  + F+AL S+ +L E+ VL S P    TK   P R +++ RLA+V++   SD G ND R+   THLG +L  GDT +GY L+T+  N  D   L+ +    LPD VLVRK +    + R   W+LK  E  E  + ++  +  + D D   +   LE D++MR R+N+YKA
Sbjct:   13 LCCICAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKW----SRPQWVSADLESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQSFIVTFIVRNQQCDDCQASFTNHSWKAVVQVRQKVEHKRTFFFLEQLILKHRVHEKTTSIESQPDGVDFFFVERNHALRFVDFLQETVPISLKTAKKLISADNHSNTANYKFTYAVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIDNDKYWR--YPFKALRSSKQLTEYTVLDSSPLEISTKGGIPVRTNRKTRLADVDIVRNSDFGVNDMRFHTVTHLGMLLNVGDTAMGYDLSTSVFNDLDTKPLD-EAGISLPDVVLVRKQFLRRVQKRSRKWKLKTIEGIEPTMPLKKADQTKHDLDYEHFLNDLEEDKDMRSRINIYKA 464          
BLAST of EWM24981.1 vs. NCBI_GenBank
Match: gi|568008367|gb|ETL82586.1| (hypothetical protein L917_17278 [Phytophthora parasitica])

HSP 1 Score: 467.618 bits (1202), Expect = 5.671e-156
Identity = 224/465 (48.17%), Postives = 313/465 (67.31%), Query Frame = 0
Query:   11 NQTPVAAICCMCAINIQPNPTNMCLQCLRTQVNIASGLSTRVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRLVDAGWIWTEPHSKRLKLKLTVQQEVMNGAVLQEAVVVEFVVRNQQCPDCQASYTIGAWKAIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGFADGMDFYFAERNQAARFTEFLETACPVRVKQSKKLVSQDDHSNVFNYKYTTIIEIVPVCKDDLVILPTKLAQNLGDIARLCLVLRVLNHLHLIDPLTGQTAEVSVEKYHKAGFEFRALLSASRLVEFMVLGSEPALAPTKTSAPARRSKRHRLAEVEVALMSDLGANDTRYRVFTHLGHILRAGDTVLGYLLATASLNSADADELETKTRAGLPDAVLVRKVYSNEGRIRP-AWRLKKFEADEME-VVEAGNAEQEDRDLRDYRQQLEGDREMRRRVNMYK 473
            +Q P   +CCMCA  I  N  N C+ CL++QV++  G+   V +HQCRGC+++        W   E ESREL+A+CL+K+  LNR++L+DA WIWTEPHS+RLKLKLTVQ+EVM+  ++Q++ VV FVVRNQQC  CQAS+   +W+A+VQVRQRVDHKRTF  LEQLILKH AH +   I+   DG+DF+F+ERN A RF +FL+ + P++VK +KKL+S D+HSN  NYK+T  +EI PVCKDDLV+LP KLA+ LG+++ LCLV  V + +H++DP T Q AE+  EKY +  + FRAL S   + +F VL S P   P+      R +++ RLA++EV   +D G NDTR+R  +HLG +L  GD+  GY L +A  N AD   L  ++   LPD VLV+K++    + R   W+LKK E  E    V   +  +E++D   +  +LE D+E+R ++N+YK
Sbjct:    6 SQMP-TILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRW----SRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKLTVQKEVMSKMIMQQSFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMKVKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVLLPVKLARMLGNMSCLCLVQSVTSSIHVVDPFTTQVAEIDSEKYWR--YPFRALRSIKAMTDFTVLDSNPMAIPSGGGRAIRVTRKTRLADMEVVRDADFGVNDTRFRTVSHLGMLLHVGDSARGYDLTSAVFNDADLVPL-VQSGMTLPDVVLVKKMFPRRIQKRARNWKLKKMEGVEQAGPVRKTDLSKEEQDYEQFLDELEEDKELRSQINLYK 462          
BLAST of EWM24981.1 vs. NCBI_GenBank
Match: gi|675207495|ref|XP_008912632.1| (hypothetical protein PPTG_16639 [Phytophthora parasitica INRA-310] >gi|566012771|gb|ETI35682.1| hypothetical protein F443_18027 [Phytophthora parasitica P1569] >gi|567950211|gb|ETK75928.1| hypothetical protein L915_17546 [Phytophthora parasitica] >gi|567978887|gb|ETL29373.1| hypothetical protein L916_17438 [Phytophthora parasitica] >gi|568038297|gb|ETM35833.1| hypothetical protein L914_17341 [Phytophthora parasitica] >gi|568087076|gb|ETN01951.1| hypothetical protein PPTG_16639 [Phytophthora parasitica INRA-310] >gi|570316466|gb|ETO64414.1| hypothetical protein F444_18050 [Phytophthora parasitica P1976] >gi|570940251|gb|ETP05508.1| hypothetical protein F441_17897 [Phytophthora parasitica CJ01A1] >gi|570970516|gb|ETP33635.1| hypothetical protein F442_17866 [Phytophthora parasitica P10297] >gi|970657657|gb|KUF95513.1| hypothetical protein AM588_10010368 [Phytophthora nicotianae])

HSP 1 Score: 467.618 bits (1202), Expect = 6.053e-156
Identity = 224/465 (48.17%), Postives = 313/465 (67.31%), Query Frame = 0
Query:   11 NQTPVAAICCMCAINIQPNPTNMCLQCLRTQVNIASGLSTRVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRLVDAGWIWTEPHSKRLKLKLTVQQEVMNGAVLQEAVVVEFVVRNQQCPDCQASYTIGAWKAIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGFADGMDFYFAERNQAARFTEFLETACPVRVKQSKKLVSQDDHSNVFNYKYTTIIEIVPVCKDDLVILPTKLAQNLGDIARLCLVLRVLNHLHLIDPLTGQTAEVSVEKYHKAGFEFRALLSASRLVEFMVLGSEPALAPTKTSAPARRSKRHRLAEVEVALMSDLGANDTRYRVFTHLGHILRAGDTVLGYLLATASLNSADADELETKTRAGLPDAVLVRKVYSNEGRIRP-AWRLKKFEADEME-VVEAGNAEQEDRDLRDYRQQLEGDREMRRRVNMYK 473
            +Q P   +CCMCA  I  N  N C+ CL++QV++  G+   V +HQCRGC+++        W   E ESREL+A+CL+K+  LNR++L+DA WIWTEPHS+RLKLKLTVQ+EVM+  ++Q++ VV FVVRNQQC  CQAS+   +W+A+VQVRQRVDHKRTF  LEQLILKH AH +   I+   DG+DF+F+ERN A RF +FL+ + P++VK +KKL+S D+HSN  NYK+T  +EI PVCKDDLV+LP KLA+ LG+++ LCLV  V + +H++DP T Q AE+  EKY +  + FRAL S   + +F VL S P   P+      R +++ RLA++EV   +D G NDTR+R  +HLG +L  GD+  GY L +A  N AD   L  ++   LPD VLV+K++    + R   W+LKK E  E    V   +  +E++D   +  +LE D+E+R ++N+YK
Sbjct:    6 SQMP-TILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRW----SRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKLTVQKEVMSKMIMQQSFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMKVKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVLLPVKLARMLGNMSCLCLVQSVTSSIHVVDPFTTQVAEIDSEKYWR--YPFRALRSIKAMTDFTVLDSNPMAIPSGGGRAIRVTRKTRLADMEVVRDADFGVNDTRFRTVSHLGMLLHVGDSARGYDLTSAVFNDADLVPL-VQSGMTLPDVVLVKKMFPRRIQKRARNWKLKKMEGVEQAGPVRKTDLSKEEQDYEQFLDELEEDKELRSQINLYK 462          
The following BLAST results are available for this feature:
BLAST of EWM24981.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106614|gb|EWM24981.1|0.000e+0100.0060s ribosomal export protein [Nannochloropsis gadi... [more]
gi|299472700|emb|CBN79871.1|4.118e-17848.40conserved unknown protein [Ectocarpus siliculosus][more]
gi|1173933922|gb|OQR85458.1|1.273e-16749.7960S ribosomal export protein NMD3 [Achlya hypogyna... [more]
gi|813110954|ref|XP_012195053.1|1.791e-16749.57hypothetical protein SPRG_01450 [Saprolegnia paras... [more]
gi|669152714|ref|XP_008611919.1|2.699e-16749.57nonsense-mediated mRNA decay protein 3 [Saprolegni... [more]
gi|1173955629|gb|OQS02570.1|5.729e-16649.4660S ribosomal export protein NMD3 [Thraustotheca c... [more]
gi|698781609|ref|XP_009823848.1|3.239e-16448.63hypothetical protein H257_02059 [Aphanomyces astac... [more]
gi|673023090|ref|XP_008865506.1|1.052e-16349.89hypothetical protein H310_03429 [Aphanomyces invad... [more]
gi|568008367|gb|ETL82586.1|5.671e-15648.17hypothetical protein L917_17278 [Phytophthora para... [more]
gi|675207495|ref|XP_008912632.1|6.053e-15648.17hypothetical protein PPTG_16639 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5705rna5705Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications