EWM24992.1, cds5684 (CDS) Nannochloropsis gaditana

Overview
NameEWM24992.1
Unique Namecds5684
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:612737..614224 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24992.1
ProductZinc finger, HIT-type
Orig transcript idgnl|cribi|Naga_100122g14.3579.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:612737..614224 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR007529Znf_HIT
Homology
BLAST of EWM24992.1 vs. NCBI_GenBank
Match: gi|585106625|gb|EWM24992.1| (Zinc finger, HIT-type [Nannochloropsis gaditana])

HSP 1 Score: 1002.66 bits (2591), Expect = 0.000e+0
Identity = 495/495 (100.00%), Postives = 495/495 (100.00%), Query Frame = 0
Query:    1 MASLHIVKKTLPGKVSVRKTDLLPCPADSFKSEDNVLLRGPTRRICLVCKSKSSAYACPRCSTPYCSAVCYKGHNQECTEGFYRHHVEEVIRLRQAEEVGAGIPPGGKAAKRATINALRRVRLQTDETEAFCSGVGGDRLEELWARKDSLDLEALTREEQRAFLASVANGDLSRDIEIWTPWWTQGGVSEGGQPLVRVERDGLGSDGGNSKGGKGGATSDRPIDFTSLHEELQRLKKRMGFPVLRPFLTSSVSPHLPYHLLDILFAYTCVLRTYNGACGLVPEDAADDLLALSPVLRYRLRTGAEAGLVRLESARGALASSLEALRRWQLLQGPAPCASSTGMSSSLAMGLAAGRDVVLLLEHKVKTQAALVDACRLMRAALREALAQGAPKEEIEGQEKPGGEVDELHSLTEKLRQLASGKTAEDLGKEGRAKARHGGKRWLRAWHKLRFFLEWSCSWDGEHHEDGQEVVGRAFRTKFEQALHEHELLLVRGEV 495
            MASLHIVKKTLPGKVSVRKTDLLPCPADSFKSEDNVLLRGPTRRICLVCKSKSSAYACPRCSTPYCSAVCYKGHNQECTEGFYRHHVEEVIRLRQAEEVGAGIPPGGKAAKRATINALRRVRLQTDETEAFCSGVGGDRLEELWARKDSLDLEALTREEQRAFLASVANGDLSRDIEIWTPWWTQGGVSEGGQPLVRVERDGLGSDGGNSKGGKGGATSDRPIDFTSLHEELQRLKKRMGFPVLRPFLTSSVSPHLPYHLLDILFAYTCVLRTYNGACGLVPEDAADDLLALSPVLRYRLRTGAEAGLVRLESARGALASSLEALRRWQLLQGPAPCASSTGMSSSLAMGLAAGRDVVLLLEHKVKTQAALVDACRLMRAALREALAQGAPKEEIEGQEKPGGEVDELHSLTEKLRQLASGKTAEDLGKEGRAKARHGGKRWLRAWHKLRFFLEWSCSWDGEHHEDGQEVVGRAFRTKFEQALHEHELLLVRGEV
Sbjct:    1 MASLHIVKKTLPGKVSVRKTDLLPCPADSFKSEDNVLLRGPTRRICLVCKSKSSAYACPRCSTPYCSAVCYKGHNQECTEGFYRHHVEEVIRLRQAEEVGAGIPPGGKAAKRATINALRRVRLQTDETEAFCSGVGGDRLEELWARKDSLDLEALTREEQRAFLASVANGDLSRDIEIWTPWWTQGGVSEGGQPLVRVERDGLGSDGGNSKGGKGGATSDRPIDFTSLHEELQRLKKRMGFPVLRPFLTSSVSPHLPYHLLDILFAYTCVLRTYNGACGLVPEDAADDLLALSPVLRYRLRTGAEAGLVRLESARGALASSLEALRRWQLLQGPAPCASSTGMSSSLAMGLAAGRDVVLLLEHKVKTQAALVDACRLMRAALREALAQGAPKEEIEGQEKPGGEVDELHSLTEKLRQLASGKTAEDLGKEGRAKARHGGKRWLRAWHKLRFFLEWSCSWDGEHHEDGQEVVGRAFRTKFEQALHEHELLLVRGEV 495          
BLAST of EWM24992.1 vs. NCBI_GenBank
Match: gi|553190471|ref|XP_005855199.1| (hit zinc finger family protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293859|gb|EKU21159.1| hit zinc finger family protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 993.801 bits (2568), Expect = 0.000e+0
Identity = 490/495 (98.99%), Postives = 491/495 (99.19%), Query Frame = 0
Query:    1 MASLHIVKKTLPGKVSVRKTDLLPCPADSFKSEDNVLLRGPTRRICLVCKSKSSAYACPRCSTPYCSAVCYKGHNQECTEGFYRHHVEEVIRLRQAEEVGAGIPPGGKAAKRATINALRRVRLQTDETEAFCSGVGGDRLEELWARKDSLDLEALTREEQRAFLASVANGDLSRDIEIWTPWWTQGGVSEGGQPLVRVERDGLGSDGGNSKGGKGGATSDRPIDFTSLHEELQRLKKRMGFPVLRPFLTSSVSPHLPYHLLDILFAYTCVLRTYNGACGLVPEDAADDLLALSPVLRYRLRTGAEAGLVRLESARGALASSLEALRRWQLLQGPAPCASSTGMSSSLAMGLAAGRDVVLLLEHKVKTQAALVDACRLMRAALREALAQGAPKEEIEGQEKPGGEVDELHSLTEKLRQLASGKTAEDLGKEGRAKARHGGKRWLRAWHKLRFFLEWSCSWDGEHHEDGQEVVGRAFRTKFEQALHEHELLLVRGEV 495
            MASLHIVKKTLPGKVSVRKTDLLPCPADSFKSEDNVLLRGPTRRICLVCKSKSSAYACPRCSTPYCSAVCYKGHNQECTEGFYRHHVEEVIRLRQAEEVGAGIPPGGKAAK ATINALRRVRLQ DETEAFCSGVGGDRLEELWARKDSLDLEALTREEQRAFLASVANGDLSRDIEIWTPWWTQGGVSEGGQPLVRVERDGLGSDGGNS+GGKGGATSDRPIDFTSLHEELQRLKKRMGFPV RPFLTSSVSPHLPYHLLDILFAYTCVLRTYNGACGLVPEDAADDLLALSPVLRYRLRTGAEAGLVRLESARGALASSLEALRRWQLLQGPAPCASSTGMSSSLAMGLAAGRDVVLLLEHKVKTQAALVDACRLMRAALREALAQGAPK EIEGQEKPGGEVDELHSLTEKLRQLASGKTAEDLGKEGRAKARHGGKRWLRAWHKLRFFLEWSCSWDGEHHEDGQEVVGRAFRTKFEQALHEHELLLVRGEV
Sbjct:    7 MASLHIVKKTLPGKVSVRKTDLLPCPADSFKSEDNVLLRGPTRRICLVCKSKSSAYACPRCSTPYCSAVCYKGHNQECTEGFYRHHVEEVIRLRQAEEVGAGIPPGGKAAKLATINALRRVRLQADETEAFCSGVGGDRLEELWARKDSLDLEALTREEQRAFLASVANGDLSRDIEIWTPWWTQGGVSEGGQPLVRVERDGLGSDGGNSQGGKGGATSDRPIDFTSLHEELQRLKKRMGFPVQRPFLTSSVSPHLPYHLLDILFAYTCVLRTYNGACGLVPEDAADDLLALSPVLRYRLRTGAEAGLVRLESARGALASSLEALRRWQLLQGPAPCASSTGMSSSLAMGLAAGRDVVLLLEHKVKTQAALVDACRLMRAALREALAQGAPKAEIEGQEKPGGEVDELHSLTEKLRQLASGKTAEDLGKEGRAKARHGGKRWLRAWHKLRFFLEWSCSWDGEHHEDGQEVVGRAFRTKFEQALHEHELLLVRGEV 501          
BLAST of EWM24992.1 vs. NCBI_GenBank
Match: gi|566013970|gb|ETI36881.1| (hypothetical protein F443_17127 [Phytophthora parasitica P1569])

HSP 1 Score: 134.035 bits (336), Expect = 7.358e-31
Identity = 98/315 (31.11%), Postives = 143/315 (45.40%), Query Frame = 0
Query:   11 LPGKVSVRKTDLLP---CPADSFKSEDNVLLRGPTRRICLVCKSKSSAYACPRCSTPYCSAVCYKGHNQECTEGFYRHHVEEVIRLRQAEEVGAGIPPGGKAAK--RATINALRRVRLQTDETEAFCSGVGGD-----RLEE--LWARKDSLDLEALTREEQRAFLASVANGDLSRDIEIWTPWWTQGGVSEGGQPLVRVERDGLGSDGGNSKGGKGGATSDRPIDFTSLHEELQRLKKRMGFPVLRPFLTSSV-----------------SPHLPYHLLDILFAYTCVLRTYNGACGLVPEDAADDLLALSPVL 296
            +P ++   +T + P     A    SE  V+      R+C VC ++ + Y CPRC+TPYCS  CY+ H + CTE F+  HV       ++E   A    G    K  R+    L RVR   +E +    G   +     R++E  L  ++  L L+ LT EE+R FL  VA+G L + +E+WTPWW         +   R  +  L   GG +  G+  + +   +           L+  + +PV R F T+                   SP L YHL++ILFAY  VLR +NG C     +AA  LL L  VL
Sbjct:    4 VPIRLGTLRTTVKPSSNVSASPVLSERPVVNNASMARVCRVCTTQEARYTCPRCNTPYCSVDCYRSHGEGCTEQFFESHV-------RSEMTLASNAKGNDDEKQQRSIQELLERVREFQEEQQQLADGEDDEEALVQRMQELALLDKEGRLTLDCLTPEERRKFLGEVADGRLGKLVELWTPWWLMSERKYRNETSARRRQLVLEEIGGENDEGENESEASSAV----------LLEPSVLYPV-RIFTTNDAQKMPKSMSALLPDGRQPSPCLRYHLVEILFAYALVLRAFNGDCAQDTAEAAFMLLDLCRVL 300          
BLAST of EWM24992.1 vs. NCBI_GenBank
Match: gi|570317609|gb|ETO65557.1| (hypothetical protein F444_17160, partial [Phytophthora parasitica P1976])

HSP 1 Score: 133.65 bits (335), Expect = 1.304e-30
Identity = 98/319 (30.72%), Postives = 144/319 (45.14%), Query Frame = 0
Query:    7 VKKTLPGKVSVRKTDLLP---CPADSFKSEDNVLLRGPTRRICLVCKSKSSAYACPRCSTPYCSAVCYKGHNQECTEGFYRHHVEEVIRLRQAEEVGAGIPPGGKAAK--RATINALRRVRLQTDETEAFCSGVGGD-----RLEE--LWARKDSLDLEALTREEQRAFLASVANGDLSRDIEIWTPWWTQGGVSEGGQPLVRVERDGLGSDGGNSKGGKGGATSDRPIDFTSLHEELQRLKKRMGFPVLRPFLTSSV-----------------SPHLPYHLLDILFAYTCVLRTYNGACGLVPEDAADDLLALSPVL 296
            + + +P ++   +T + P     A    SE  V+      R+C VC ++ + Y CPRC+TPYCS  CY+ H + CTE F+  HV       ++E   A    G    K  R+    L RVR   +E +    G   +     R++E  L  ++  L L+ LT EE+R FL  VA+G L + +E+WTPWW         +   R     L   GG +  G+  + +   +           L+  + +PV R F T+                   SP L YHL++ILFAY  VLR +NG C     +AA  LL L  VL
Sbjct:   13 IMEPVPIRLGTLRTTVKPSSNVSASPVLSEKPVVNNASMARVCRVCTTQEARYTCPRCNTPYCSVDCYRSHGEGCTEQFFESHV-------RSEMTLASNAKGNDDEKQQRSIQELLERVREFQEEQQQLADGEDDEEALVQRMQELALLDKEGRLTLDCLTPEERRKFLGEVADGRLGKLVELWTPWWLMSERKYRNETSARRRELVLEEIGGENDEGENESEASSAV----------VLEPSVLYPV-RIFTTNVAQKMPKSMSALLPDGRQPSPCLRYHLVEILFAYALVLRAFNGDCAQDTAEAAFMLLDLCRVL 313          
BLAST of EWM24992.1 vs. NCBI_GenBank
Match: gi|675207153|ref|XP_008912461.1| (hypothetical protein PPTG_16626 [Phytophthora parasitica INRA-310] >gi|568087553|gb|ETN02424.1| hypothetical protein PPTG_16626 [Phytophthora parasitica INRA-310])

HSP 1 Score: 133.265 bits (334), Expect = 1.484e-30
Identity = 98/315 (31.11%), Postives = 142/315 (45.08%), Query Frame = 0
Query:   11 LPGKVSVRKTDLLP---CPADSFKSEDNVLLRGPTRRICLVCKSKSSAYACPRCSTPYCSAVCYKGHNQECTEGFYRHHVEEVIRLRQAEEVGAGIPPGGKAAK--RATINALRRVRLQTDETEAFCSGVGGD-----RLEE--LWARKDSLDLEALTREEQRAFLASVANGDLSRDIEIWTPWWTQGGVSEGGQPLVRVERDGLGSDGGNSKGGKGGATSDRPIDFTSLHEELQRLKKRMGFPVLRPFLTSSV-----------------SPHLPYHLLDILFAYTCVLRTYNGACGLVPEDAADDLLALSPVL 296
            +P ++   +T + P     A    SE  V+      R+C VC ++ + Y CPRC+TPYCS  CY+ H + CTE F+  HV       ++E   A    G    K  R+    L RVR   +E +    G   +     R++E  L  ++  L L+ LT EE+R FL  VA+G L + +E+WTPWW         +   R     L   GG +  G+  + +   +           L+  + +PV R F T+                   SP L YHL++ILFAY  VLR +NG C     +AA  LL L  VL
Sbjct:    4 VPIRLGTLRTTVKPSSNVSASPVLSEGPVVNNASMARVCRVCTTQEARYTCPRCNTPYCSVDCYRSHGEGCTEQFFESHV-------RSEMTLASNAKGNDDEKQQRSIQELLERVREFQEEQQQLADGEDDEEALVQRMQELALLDKEGRLTLDCLTPEERRKFLGEVADGRLGKLVELWTPWWLMSERKYRNETSARRRELVLEEIGGENDEGENESEASSAV----------LLEPSVLYPV-RIFTTNVAQKMPKSMSALLPDGRQPSPCLRYHLVEILFAYALVLRAFNGDCAQDTAEAAFMLLDLCRVL 300          
BLAST of EWM24992.1 vs. NCBI_GenBank
Match: gi|568039420|gb|ETM36915.1| (hypothetical protein L914_16489, partial [Phytophthora parasitica])

HSP 1 Score: 132.88 bits (333), Expect = 2.622e-30
Identity = 98/319 (30.72%), Postives = 144/319 (45.14%), Query Frame = 0
Query:    7 VKKTLPGKVSVRKTDLLP---CPADSFKSEDNVLLRGPTRRICLVCKSKSSAYACPRCSTPYCSAVCYKGHNQECTEGFYRHHVEEVIRLRQAEEVGAGIPPGGKAAK--RATINALRRVRLQTDETEAFCSGVGGD-----RLEE--LWARKDSLDLEALTREEQRAFLASVANGDLSRDIEIWTPWWTQGGVSEGGQPLVRVERDGLGSDGGNSKGGKGGATSDRPIDFTSLHEELQRLKKRMGFPVLRPFLTSSV-----------------SPHLPYHLLDILFAYTCVLRTYNGACGLVPEDAADDLLALSPVL 296
            + + +P ++   +T + P     A    SE  V+      R+C VC ++ + Y CPRC+TPYCS  CY+ H + CTE F+  HV       ++E   A    G    K  R+    L RVR   +E +    G   +     R++E  L  ++  L L+ LT EE+R FL  VA+G L + +E+WTPWW         +   R     L   GG +  G+  + +   +           L+  + +PV R F T+                   SP L YHL++ILFAY  VLR +NG C     +AA  LL L  VL
Sbjct:   13 IMEPVPIRLGTLRTTVKPSSNVSASPVLSEGPVVNNASMARVCRVCTTQEARYTCPRCNTPYCSVDCYRSHGEGCTEQFFESHV-------RSEMTLASNAKGNDDEKQQRSIQELLERVREFQEEQQQLADGEDDEEALVQRMQELALLDKEGRLTLDCLTPEERRKFLGEVADGRLGKLVELWTPWWLMSERKYRNETSARRRELVLEEIGGENDEGENESEASSAV----------VLEPSVLYPV-RIFTTNVAQKMPKSMSALLPDGRQPSPCLRYHLVEILFAYALVLRAFNGDCAQDTAEAAFMLLDLCRVL 313          
BLAST of EWM24992.1 vs. NCBI_GenBank
Match: gi|570941469|gb|ETP06726.1| (hypothetical protein F441_16988 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 132.494 bits (332), Expect = 2.762e-30
Identity = 97/315 (30.79%), Postives = 142/315 (45.08%), Query Frame = 0
Query:   11 LPGKVSVRKTDLLP---CPADSFKSEDNVLLRGPTRRICLVCKSKSSAYACPRCSTPYCSAVCYKGHNQECTEGFYRHHVEEVIRLRQAEEVGAGIPPGGKAAK--RATINALRRVRLQTDETEAFCSGVGGD-----RLEE--LWARKDSLDLEALTREEQRAFLASVANGDLSRDIEIWTPWWTQGGVSEGGQPLVRVERDGLGSDGGNSKGGKGGATSDRPIDFTSLHEELQRLKKRMGFPVLRPFLTSSV-----------------SPHLPYHLLDILFAYTCVLRTYNGACGLVPEDAADDLLALSPVL 296
            +P ++   +T + P     A    SE  V+      R+C VC ++ + Y CPRC+TPYCS  CY+ H + CTE F+  HV       ++E   A    G    K  R+    L RVR   +E +    G   +     R++E  L  ++  L L+ LT EE+R FL  VA+G L + +E+WTPWW         +   R  +  L   GG +  G+  + +   +           L+  + +PV R F T+                   SP L YHL++ILFAY  VLR +NG C     + A  LL L  VL
Sbjct:    4 VPIRLGTLRTTVKPSSNVSASPVLSEGPVVNNASMARVCRVCTTQEARYTCPRCNTPYCSVDCYRSHGEGCTEQFFESHV-------RSEMTLASNAKGNDDEKQQRSIQELLERVREFQEEQQQLADGEDDEEALVQRMQELALLDKEGRLTLDCLTPEERRKFLGEVADGRLGKLVELWTPWWLMSERKYRNETSARRRQLVLEEIGGENDEGENESEASSAV----------LLEPSVLYPV-RIFTTNDAQKMPKSMSALLPDGRQPSPCLRYHLVEILFAYALVLRAFNGDCAQDTAETAFMLLDLCRVL 300          
BLAST of EWM24992.1 vs. NCBI_GenBank
Match: gi|570971645|gb|ETP34764.1| (hypothetical protein F442_16987 [Phytophthora parasitica P10297])

HSP 1 Score: 132.109 bits (331), Expect = 3.109e-30
Identity = 99/310 (31.94%), Postives = 143/310 (46.13%), Query Frame = 0
Query:   11 LPGKVSVRKTDLLP---CPADSFKSEDNVLLRGPTRRICLVCKSKSSAYACPRCSTPYCSAVCYKGHNQECTEGFYRHHVEEVIRLRQAEEVGAGIPPGGKAAK--RATINALRRVRLQTDETEAFCSGVGGD-----RLEE--LWARKDSLDLEALTREEQRAFLASVANGDLSRDIEIWTPWW------TQGGVSEGGQPLVRVERDGLGSDGGNSKGGKGGATSD----RPIDFTSLHEELQRLKKRMG--FPVLRPFLTSSVSPHLPYHLLDILFAYTCVLRTYNGACGLVPEDAADDLLALSPVL 296
            +P ++   +T + P     A    SE  V+      R+C VC ++ + Y CPRC+TPYCS  CY+ H + CTE F+  HV       ++E   A    G    K  R+    L RVR   +E +    G   +     R++E  L  ++  L L+ LT EE+R FL  VA+G L + +E+WTPWW       +   S   + LV  E  G   +G N          +     P+   + + + Q++ K M    P  R       SP L YHL++ILFAY  VLR +NG C     + A  LL L  VL
Sbjct:    4 VPIRLGTLRTTVKPSSNVSASPVLSEGPVVNNASMARVCRVCTTQEARYTCPRCNTPYCSVDCYRSHGEGCTEQFFESHV-------RSEMTLASNAKGNDDEKQQRSIQELLERVREFQEEQQQLADGEDDEEALVQRMQELALLDKEGRLTLDCLTPEERRKFLGEVADGRLGKLVELWTPWWLMSERKYRNETSARRRELVLEEIGGENDEGENESEASSAVVLEPSVLYPVRIFTTN-DAQKMPKSMSALLPDGR-----QPSPCLRYHLVEILFAYALVLRAFNGDCAQDTAETAFMLLDLCRVL 300          
BLAST of EWM24992.1 vs. NCBI_GenBank
Match: gi|567951349|gb|ETK77051.1| (hypothetical protein L915_16656, partial [Phytophthora parasitica] >gi|567980012|gb|ETL30482.1| hypothetical protein L916_16561, partial [Phytophthora parasitica] >gi|568009542|gb|ETL83744.1| hypothetical protein L917_16383, partial [Phytophthora parasitica])

HSP 1 Score: 132.109 bits (331), Expect = 4.002e-30
Identity = 97/319 (30.41%), Postives = 144/319 (45.14%), Query Frame = 0
Query:    7 VKKTLPGKVSVRKTDLLP---CPADSFKSEDNVLLRGPTRRICLVCKSKSSAYACPRCSTPYCSAVCYKGHNQECTEGFYRHHVEEVIRLRQAEEVGAGIPPGGKAAK--RATINALRRVRLQTDETEAFCSGVGGD-----RLEE--LWARKDSLDLEALTREEQRAFLASVANGDLSRDIEIWTPWWTQGGVSEGGQPLVRVERDGLGSDGGNSKGGKGGATSDRPIDFTSLHEELQRLKKRMGFPVLRPFLTSSV-----------------SPHLPYHLLDILFAYTCVLRTYNGACGLVPEDAADDLLALSPVL 296
            + + +P ++   +T + P     A    SE  V+      R+C VC ++ + Y CPRC+TPYCS  CY+ H + CTE F+  HV       ++E   A    G    K  R+    L RVR   +E +    G   +     R++E  L  ++  L L+ LT EE+R FL  VA+G L + +E+WTPWW         +   R  +  L   GG +  G+  + +   +           L+  + +PV R F T+                   SP L YHL++ILFAY  VLR +NG C     + A  LL L  VL
Sbjct:   13 IMEPVPIRLGTLRTTVKPSSNVSASPVLSEGPVVNNASMARVCRVCTTQEARYTCPRCNTPYCSVDCYRSHGEGCTEQFFESHV-------RSEMTLASNAKGNDDEKQQRSIQELLERVREFQEEQQQLADGEDDEEALVQRMQELALLDKEGRLTLDCLTPEERRKFLGEVADGRLGKLVELWTPWWLMSERKYRNETSARRRQLVLEEIGGENDEGENESEASSAV----------LLEPSVLYPV-RIFTTNDAQKMPKSMSALLPDGRQPSPCLRYHLVEILFAYALVLRAFNGDCAQDTAETAFMLLDLCRVL 313          
BLAST of EWM24992.1 vs. NCBI_GenBank
Match: gi|527185882|gb|EPS59102.1| (hypothetical protein M569_15706, partial [Genlisea aurea])

HSP 1 Score: 130.954 bits (328), Expect = 4.250e-30
Identity = 108/364 (29.67%), Postives = 163/364 (44.78%), Query Frame = 0
Query:   38 LRGPTRRICLVCKSKSSAYACPRCSTPYCSAVCYKGHNQECTEGFYRHHVEEVIRLRQAEEVGAGIPPGGKAAKRATINALRRVRLQTDETEAFCSGVGGDRLEELWARK---DSLDLEALTREEQRAFLASVANGDLSRDIEIWTPWWTQG-----GVSEGGQPLVRVERDGLGSDGGNSKGGKGGATSDRPIDFTSLHEELQRLKKRMGFPVLRPFLTSSVSPHLPYHLLDILFAYTCVLRTYNGACGLVPEDAADDLLALSPVLRYRLRTGAEAGLVRLESARGALASSLEALRRWQLLQGPAPCASSTGMSSSLAMGLAAGRDVVLLLEHKVKTQAALV-DACRLMRAALREALAQGAPK 392
            +   +R IC VC+ + S Y CPRC+T YCS  CYK H+  CTE F R +V E ++  Q            + ++   ++ L+R+  + DE + F         EE   +     S+  + L+ EE++ F   +A+G+LS+ IE W PWW +       +S  G  LVR   + L +D               P+D   L  E          P +        SP L  HLLD++++Y  VLRTYNG   + P ++A  LL++S +L             + E+   AL   LE             C+ +      L  GLA   DVV +L     +   L+ D CRL++AA RE  ++G PK
Sbjct:   17 INSASRIICRVCEKQFSQYTCPRCNTRYCSLRCYKSHSLRCTESFMRDNVMEELQQIQP----------NQESRLKMLDILKRLH-ELDEEDNFDENDDPSLSEETIQKILSGSSVSFDDLSSEEKKRFQRVIASGELSKLIEPWDPWWLRPSARHISLSSNGARLVRPLENVLNAD---------------PLDDIPLGPE-------SPLPSVTDLTAGVPSPLLAIHLLDVVYSYCFVLRTYNGDWKVDPLESATLLLSVSSIL---------GQATQPETVPEALLPCLEQT-----------CSPTYRHIGGLQFGLALVGDVVHILYLGGPSLICLLCDLCRLIQAAEREVKSEGLPK 327          
The following BLAST results are available for this feature:
BLAST of EWM24992.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106625|gb|EWM24992.1|0.000e+0100.00Zinc finger, HIT-type [Nannochloropsis gaditana][more]
gi|553190471|ref|XP_005855199.1|0.000e+098.99hit zinc finger family protein, partial [Nannochlo... [more]
gi|566013970|gb|ETI36881.1|7.358e-3131.11hypothetical protein F443_17127 [Phytophthora para... [more]
gi|570317609|gb|ETO65557.1|1.304e-3030.72hypothetical protein F444_17160, partial [Phytopht... [more]
gi|675207153|ref|XP_008912461.1|1.484e-3031.11hypothetical protein PPTG_16626 [Phytophthora para... [more]
gi|568039420|gb|ETM36915.1|2.622e-3030.72hypothetical protein L914_16489, partial [Phytopht... [more]
gi|570941469|gb|ETP06726.1|2.762e-3030.79hypothetical protein F441_16988 [Phytophthora para... [more]
gi|570971645|gb|ETP34764.1|3.109e-3031.94hypothetical protein F442_16987 [Phytophthora para... [more]
gi|567951349|gb|ETK77051.1|4.002e-3030.41hypothetical protein L915_16656, partial [Phytopht... [more]
gi|527185882|gb|EPS59102.1|4.250e-3029.67hypothetical protein M569_15706, partial [Genlisea... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5699rna5699Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications