EWM25021.1, cds5674 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25021.1 vs. NCBI_GenBank
Match: gi|585106656|gb|EWM25021.1| (f-box protein [Nannochloropsis gaditana]) HSP 1 Score: 832.787 bits (2150), Expect = 0.000e+0 Identity = 401/401 (100.00%), Postives = 401/401 (100.00%), Query Frame = 0 Query: 1 MERQRCRRISWGILISFNFLPITRGLLRTLPLPPCLDARDLPSQQALDAYIKKGPCVLTHAFDKDPNTRKMADDTFSDTFFEEFQDVELEVQLKRNSKIAKPRLYSGTLAGIVDGMMQKSTHEEAWYLLNEKLLEDSQNRKIKDPFRLPPSLFGKLDYFDLFPQRIRPKKHCLILGGTGARSFLHVDPFEWTGVNYLLEGRKIWTFFPPCSADLGLKRVLPEAWEGEVSAGWKSTDFDLYYKVPEIFEGAVTLDLPEVLADVEGVQALVQEEGELVVIPPGWAHQVYHLKPGLSLAWQVCNHGNLKNVIMHMLTWAIESGGNLRHAQERPLHGGKAGLGQMEGTQEHVTRMVEIICQDTTEGVDERHQVMATIEKALRQAMILRHGPERGLQAYERLWQKQ 401 MERQRCRRISWGILISFNFLPITRGLLRTLPLPPCLDARDLPSQQALDAYIKKGPCVLTHAFDKDPNTRKMADDTFSDTFFEEFQDVELEVQLKRNSKIAKPRLYSGTLAGIVDGMMQKSTHEEAWYLLNEKLLEDSQNRKIKDPFRLPPSLFGKLDYFDLFPQRIRPKKHCLILGGTGARSFLHVDPFEWTGVNYLLEGRKIWTFFPPCSADLGLKRVLPEAWEGEVSAGWKSTDFDLYYKVPEIFEGAVTLDLPEVLADVEGVQALVQEEGELVVIPPGWAHQVYHLKPGLSLAWQVCNHGNLKNVIMHMLTWAIESGGNLRHAQERPLHGGKAGLGQMEGTQEHVTRMVEIICQDTTEGVDERHQVMATIEKALRQAMILRHGPERGLQAYERLWQKQ Sbjct: 1 MERQRCRRISWGILISFNFLPITRGLLRTLPLPPCLDARDLPSQQALDAYIKKGPCVLTHAFDKDPNTRKMADDTFSDTFFEEFQDVELEVQLKRNSKIAKPRLYSGTLAGIVDGMMQKSTHEEAWYLLNEKLLEDSQNRKIKDPFRLPPSLFGKLDYFDLFPQRIRPKKHCLILGGTGARSFLHVDPFEWTGVNYLLEGRKIWTFFPPCSADLGLKRVLPEAWEGEVSAGWKSTDFDLYYKVPEIFEGAVTLDLPEVLADVEGVQALVQEEGELVVIPPGWAHQVYHLKPGLSLAWQVCNHGNLKNVIMHMLTWAIESGGNLRHAQERPLHGGKAGLGQMEGTQEHVTRMVEIICQDTTEGVDERHQVMATIEKALRQAMILRHGPERGLQAYERLWQKQ 401
BLAST of EWM25021.1 vs. NCBI_GenBank
Match: gi|299473168|emb|CBN78744.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 175.637 bits (444), Expect = 3.846e-47 Identity = 125/372 (33.60%), Postives = 180/372 (48.39%), Query Frame = 0 Query: 34 PCLDARDLPSQQALDAYIKKGPCVLTHAFDKDPNTRKMADDTFSDTFFEEFQDVELEVQLKRNSKIAKPRLYSGTLAGIVDGMMQKSTHEEAWYLLNEKLLEDSQNR-KIKDPFRLPPSLFGKLDYFDLFPQRIRPKKHCLILGGTGARSFLHVDPFEWTGVNYLLEGRKIWTFFPPCS---ADLGLKRVLPEAW-EGEVSAGWKSTDFDLYYKVPEIFEGAVTLDLPEVLADVEGVQ---ALVQEEGELVVIPPGWAHQVYHLKPGLSLAWQVCNHGNLKNVIMHMLTWAIESGGNLRHAQERPLHGGKAGLGQMEGTQEHVTRMVEIICQDTTEGVDERHQVMATIEKALRQAMILRHGPERGLQAYERL 397 P +D L Q D PC+LT P+ +++ D ++ + Q+ R+++ + ++ +L V + +STH E+WYLL+E LL+ Q R ++ P L G D F LFP +RP+ C I+GG GARSFLH DP EW G N LLEGRK+WTF PP + + LG R+ P A+ VSAGW+S + DLY GA T P E +Q + VQE GELV+IPP HQVYHL+P L++A Q + V HML W S +++ + + R Q I++ L+ A++ RHG E+GL+A++ L Sbjct: 85 PRIDVTGLSRAQVADLVDFSRPCILTGVLSS-PDC-----ESWCDGLLQDLGEETCAFQI-RDNESGRSEVFEASLMDFVKRLQDESTHNESWYLLDEHLLDFPQARPELGALLEKPQDLLGT-DEFQLFPPSVRPQNLCTIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPLADLDSSLGTYRLAPNAFGSHNVSAGWQS-NVDLYQ------HGAATASWPTAGEGQEVMQHAVSGVQEAGELVLIPPRHWHQVYHLEPSLAVASQYMDFRVRDRVFRHMLDWCGASD--------------------------------DVLLSSRFDALALRDQ----IKEVLKVALVARHGGEKGLEAFDGL 405
BLAST of EWM25021.1 vs. NCBI_GenBank
Match: gi|1129203092|gb|OLQ05774.1| (Bifunctional arginine demethylase and lysyl-hydroxylase PSR [Symbiodinium microadriaticum]) HSP 1 Score: 127.487 bits (319), Expect = 3.257e-28 Identity = 94/291 (32.30%), Postives = 142/291 (48.80%), Query Frame = 0 Query: 48 DAYIKKGPCVLTHAFDKDPNTRKMADDTFS-DTFFEEFQDVELEVQLKRNSKIAKPRLYSGTLAGIVDGMMQKSTHEEAWYLLNEKLLEDSQ--NRKIKDPFRLPPSLFGKLDYFDLFPQRIRPKKHCLILGGTGARSFLHVDPFEWTGVNYLLEGRKIWTFFP----------PCSADLGLKRVLPEAWEGEVSAGWKSTDFDLY-------YKVPEIFEGAVTLDLPEVLADVEGVQAL---VQEEGELVVIPPGWAHQVYHLKPGLSLAWQVCNHGNLKNVIMHMLTW 315 D + C+L PN+ + A F T EE E+E + +++ L + +L+ ++ + S HE+ L++E ++ + N ++ PP F + D F FP +RP + CL++GG GARS LH+DP WTG N LL+GRK+W FFP P S G+++ E + +GW+S D DL+ + P G ++ DL + V+G A VQE GE ++ P W HQ YHL P A QV N GNL V+ H++ W Sbjct: 14 DDFTSAADCLLVL-----PNSFQEASSNFCCKTLLEEAGCQEVEYKRAAQGELS---LATDSLSRVLCDFVPNSCHEDPVLLMDENVVSTTSLANSLLE---AAPP--FLREDLFCEFPLMLRPAQLCLVVGGQGARSDLHIDPLSWTGWNCLLQGRKLWRFFPDIPQHAEAFRPASRPFGIRKGGAEV--CTIGSGWRS-DVDLFANRTNTAAEPPCDSFGWLSPDLAK-FPHVKGCSAPLEHVQEPGETLIFPGHWWHQTYHLTPTFGFAGQVLNSGNLGRVLGHIIRW 287
BLAST of EWM25021.1 vs. NCBI_GenBank
Match: gi|551667017|ref|XP_005836269.1| (hypothetical protein GUITHDRAFT_162130 [Guillardia theta CCMP2712] >gi|428180422|gb|EKX49289.1| hypothetical protein GUITHDRAFT_162130 [Guillardia theta CCMP2712]) HSP 1 Score: 109.383 bits (272), Expect = 9.473e-23 Identity = 79/254 (31.10%), Postives = 121/254 (47.64%), Query Frame = 0 Query: 90 EVQLKRNSKIAKPRLYSGTLAGIVDGMMQKSTHEEAWYLLNEKLLEDSQNRKIKDPFRLPPSLFGKLDYFDLFPQRIRPKKHCLILGGTGARSFLHVDPFEWTGVNYLLEGRKIWTFFPP--------CSADLGL-----------KRVLPEAWEGE--------VSAGWKSTDFDLYYKVPEIFEGAVTLDLPEVLADVEGVQALVQEEGELVVIPPGWAHQVYHLKPGLSLAWQVCNHGNLKNVIMHMLTWA 316 E++ +R K + Y + +D ++ S H++ ++L +E LLED ++ + + R F + F+LFP+ IRPK CL++GG G+RS LH DP++W G N+ LEG K+WTF PP ADL L R+ P AW+ E ++AGW+S D DLY E+F + V + Q L+ G L + P +++A Q N V+ HML W+ Sbjct: 139 EIEFQRRCKGSTSLEYE-SFEDFID-IVFDSKHDDYYFLFDESLLEDKESLRKRISLRQD---FFPGNLFELFPKSIRPKDSCLVIGGVGSRSTLHADPYDWMGWNFCLEGSKLWTFLPPSFCGERVAARADLELLISLEADDKSSYRLEPNAWDAEDEQMTNFSLAAGWQS-DNDLYR---EMFATGI------VWMEQNSQQNLIN-LGRLEI-------------PSIAIASQYANLAGFDRVLNHMLDWS 363
BLAST of EWM25021.1 vs. NCBI_GenBank
Match: gi|397574750|gb|EJK49361.1| (hypothetical protein THAOC_31769, partial [Thalassiosira oceanica]) HSP 1 Score: 99.3673 bits (246), Expect = 3.420e-19 Identity = 93/308 (30.19%), Postives = 140/308 (45.45%), Query Frame = 0 Query: 85 QDVELEVQLKRNSKIAKPRLYSGTLAGIVDGMMQKSTHEEAWYLLNEKLLEDS------QNRKIKD----PFRLPPSLFGKLDYFDLFPQRIRPKKHCLILGGTGARSFLHVDPFEWTGVNYLLEGRKIWTF-FPPCSADLGLK---------RVLPEAWEGE-----------VSAGWKSTDFDLYYKVPEIFEGAVT-LDLPEVLADV-------------------EGVQAL------------------VQEEGELVVIPPGWAHQVYHLKPGLSLAWQVCNHGNLKNVIMHMLTWAIESGGNL 323 Q+V+L+ +++R+ + +YS L+ +D +M S+H++A++ E LL S +RK++ PF PS +FD FP+ +RP +IL G GA S LH DPFEWTG + LEG KIW F PP G++ R+ AWE E +SAGW+S D LY V E F A ++ E+ +DV E + AL +Q G+L++IP HQ Y P +++A Q + + VI H+L+ + NL Sbjct: 88 QEVDLQRKIRRDGS-PETEIYSMPLSETIDFIMD-SSHDDAFFAFCEGLLPCSIPGSEILSRKLEAVRDAPFPGVPS------WFDFFPRHLRPSD-AVILAGAGASSTLHRDPFEWTGTSLCLEGTKIWRFVLPPADEQGGVEIVDRFLSSYRLESIAWEDEERGDPSDSTTIISAGWQS-DLSLYDFVDEDFRTAFEWFEMEELDSDVFEVNLERAAVDGSSLKPSMETLDALNGIRGTKGGASEPNFVTAIQRPGDLLIIPAHCWHQTYGPVPSIAIASQRFDSSIARRVIDHILSVSKTDTRNL 385
BLAST of EWM25021.1 vs. NCBI_GenBank
Match: gi|390333184|ref|XP_003723657.1| (PREDICTED: F-box protein At1g78280 [Strongylocentrotus purpuratus]) HSP 1 Score: 89.3521 bits (220), Expect = 3.864e-16 Identity = 50/158 (31.65%), Postives = 83/158 (52.53%), Query Frame = 0 Query: 152 LFGKLDYFDLFPQRIRPKKHCLILGGTGARSFLHVDPFEWTGVNYLLEGRKIWTFFPPCSADLGLKRVLPEAWEGEVSAGWKSTDFDLYYKVPEIFEGAVTLDLPEVLADVEGVQALVQEEGELVVIPPGWAHQVYHLKPGLSLAWQVCNHGNLKNVI 309 ++ + D+F +FP+ IRP ++ G +RS LH+DP+ WTG N ++ G+K W +PP DL P ++G+ + Y + F+ LD A G+Q + Q GEL++IP GW HQ +++K +++ QV N N K ++ Sbjct: 148 MYLQEDFFQIFPEEIRPWNAMMLWGTAHSRSALHIDPYNWTGTNAVIWGKKRWKLYPPGQDDLLYATTNP-------NSGF-PLNCHTYSSPIDAFDP--DLDAYPDFAKARGIQ-VEQNPGELLIIPTGWFHQAFNVKETFAISSQVMNLANYKIIL 294
BLAST of EWM25021.1 vs. NCBI_GenBank
Match: gi|195997497|ref|XP_002108617.1| (hypothetical protein TRIADDRAFT_51707 [Trichoplax adhaerens] >gi|190589393|gb|EDV29415.1| hypothetical protein TRIADDRAFT_51707 [Trichoplax adhaerens]) HSP 1 Score: 89.7373 bits (221), Expect = 5.000e-16 Identity = 57/191 (29.84%), Postives = 97/191 (50.79%), Query Frame = 0 Query: 126 WYLLNEKLLEDSQNRKIKDPFRLPPSLFGKLDYFDLFPQRIRPKKHCLILGGTGARSFLHVDPFEWTGVNYLLEGRKIWTFFPPCSADLGLKRVLPEAWEGEVSAGWKSTDFDLYYKVPEIFEGAVTLDLPEVLADVEGVQALVQEEGELVVIPPGWAHQVYHLKPGLSLAWQVCNHGNLKNVIMHMLTWA 316 W+ + ++L + ++ D + +++ K ++F LFP+ IRP L+ G +RS LH+DP+ WTG N +L GRK W FPP + + P G +K Y P I + + + +V ++ + Q GEL++IPPGW HQVY+ ++++ Q+ N N N+I+ + A Sbjct: 184 WHYVQDELFINRHDKLKAD---IGEAIYFKENFFKLFPEEIRPWDAMLLWGSAHSRSHLHIDPYNWTGTNAVLHGRKRWKLFPPGQDNKFY--ITPNQMCGFPLNCYK-------YNSP-IDSFNIDDEKYPLFRNVNYIE-IEQNAGELLIIPPGWFHQVYNPVETIAISSQIMNSKNY-NIILKEIIAA 359
BLAST of EWM25021.1 vs. NCBI_GenBank
Match: gi|676399045|ref|XP_009042800.1| (expressed protein, partial [Aureococcus anophagefferens] >gi|323446278|gb|EGB02501.1| expressed protein, partial [Aureococcus anophagefferens]) HSP 1 Score: 88.1965 bits (217), Expect = 5.568e-16 Identity = 71/202 (35.15%), Postives = 102/202 (50.50%), Query Frame = 0 Query: 120 STHEEAWYLLNEKLLE--DSQNRKIKDPFRLPPSLFG-KLDYFDLFPQRIRPKKHCLILGGTGARSFLHVDPFEWTGVNYLLEGRKIWTF-FPPCSADLGLKRVLPEAWEGEVSAGWKSTDFDLYYKV-----PEIF----------------EGAVTLDLPEVLADVEGVQALVQEEGELVVIPPGWAHQVYHLKPGLSLA 296 S+H +L +E LL+ D P R ++FG + +FD FP+ RP+ C++ G GARS LH DP++WTG + +EG K+W F ADLG + EA+ G+ SAG +S D DLY + PE + A + LP+ V AL Q G++VV+PP HQ Y L+P L++A Sbjct: 102 SSHALPSFLFDEFLLDGDDDLRGAAVGPQR---AIFGGERSWFDHFPESRRPRDGCVVGAGAGARSPLHRDPYDWTGTSLCVEGSKVWRFALDVADADLGAYELASEAFGGD-SAGTQS-DADLYARRVGDGWPEPYAYDDDPALAATWSAAARFAPDVALPKT---ARFVTAL-QRAGDVVVVPPRAWHQTYALEPSLAVA 294
BLAST of EWM25021.1 vs. NCBI_GenBank
Match: gi|676429887|ref|XP_009045747.1| (hypothetical protein LOTGIDRAFT_237632 [Lottia gigantea] >gi|556114865|gb|ESP03517.1| hypothetical protein LOTGIDRAFT_237632 [Lottia gigantea]) HSP 1 Score: 89.7373 bits (221), Expect = 5.755e-16 Identity = 74/271 (27.31%), Postives = 123/271 (45.39%), Query Frame = 0 Query: 36 LDAR-DLPSQQALDAYIKKGPCVLTHAFDKDPNTRKMADDTFSDTFFEEFQDVELEVQLKRNSKIAKPRLYSGTLAGIVDGMMQKSTHEEAWYLLNEKLLEDSQNRKIKDPFRLPPSLFGKLDYFDLFPQRIRPKKHCLILGGTG-ARSFLHVDPFEWTGVNYLLEGRKIWTFFPPCSADLGLKRVLPEAWEGEVSAGWKSTDFDLYYKVPEIFEGAVTLDLPEVLADVEGVQALVQEEGELVVIPPGWAHQVYHLKPGLSLAWQVCNHGN 304 +D R D+ ++ D Y K P V+T P A SD F + + + + ++ S + + + L + + +TH W L ++L R+ ++P +L+ + D+F +FP+ IRP C+ L GT +RSFLH+DP+ WTG N +L+G K W FPP L R + G+ F Y + F + +E L Q G+ ++IPPGW HQ Y+++ ++++ Q N N Sbjct: 110 IDKRSDMSLEEFWDVYDGKWPVVITDVISDWP-----ARQWTSDYFIQNYGEARVVMKAVHGS-LDDAKGLALPLNLFIKHLNHSTTH--TWTYLEDELFIP---RRPHLSQQVPRNLYTEEDFFRMFPKEIRPWD-CMFLWGTAHSRSFLHIDPYNWTGTNAVLKGHKKWKLFPPGQDHLLSIRY-------HRTCGFPLDCFK-YNSEIDTFTDTEKYSQYKQATYIE----LDQYPGDFLIIPPGWFHQAYNVEETMAISGQYMNRNN 356
BLAST of EWM25021.1 vs. NCBI_GenBank
Match: gi|1176117601|ref|XP_020629976.1| (F-box protein At1g78280-like [Orbicella faveolata]) HSP 1 Score: 89.3521 bits (220), Expect = 8.230e-16 Identity = 71/239 (29.71%), Postives = 108/239 (45.19%), Query Frame = 0 Query: 124 EAWYLLNEKLLEDSQNRKIKDPFRLPPSLFGKLDYFDLFPQRIRPKKHCLILGGTGARSFLHVDPFEWTGVNYLLEGRKIWTFFPPCSADLGLKRVLPEAWEGEVSAGWK-STDFDLY---YKVPEIFEGAVTLDLPEVLADVEGVQALVQEEGELVVIPPGWAHQVYHLKPGLSLAWQVCNHGNLKNVIMHMLTWAIESGGNLRHAQERPLHGGKAGLGQMEGTQEHVTRMVEIICQD 358 E W L ++L + N +++D P ++ K D+F L P+ IRP L+ G +RS LH+DP+ WTG N +L G+K+W +PP L R G WK ++ D Y YK F A + + QE G+L +IP GW HQ Y+ ++++ QV N N K V+ I GG + + G+ +E V +V+II +D Sbjct: 188 EVWTYLEDELFIE-MNPELRDYLGQP--VYLKEDFFQLLPKEIRPWNAMLLWGTAHSRSSLHIDPYNWTGTNAVLSGKKMWKLYPPGQDHLLYVRQHQRC--GFPLDCWKYNSPIDAYNPDYKQYPKFRQAKAI-------------SFTQEAGDLFIIPTGWFHQAYNPVETMAISSQVMNSQNYKLVLDE-----IYKGGEVDRKK-------LPGIFDSLSAREQVEAVVKIIPKD 396 The following BLAST results are available for this feature:
BLAST of EWM25021.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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