EWM25017.1, cds5656 (CDS) Nannochloropsis gaditana

Overview
NameEWM25017.1
Unique Namecds5656
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:537975..539273 -

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Properties
Property NameValue
Protein idEWM25017.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100068g6.2441.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:537975..539273 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM25017.1 vs. NCBI_GenBank
Match: gi|585106652|gb|EWM25017.1| (hypothetical protein Naga_100068g6 [Nannochloropsis gaditana])

HSP 1 Score: 898.656 bits (2321), Expect = 0.000e+0
Identity = 432/432 (100.00%), Postives = 432/432 (100.00%), Query Frame = 0
Query:    1 MGWSRYDVWQCYLLHHAHPSPRCYAHTCQIYIYIKEQGKVILRLTEVARYINLYLVLRSYDTIFCKPYRGLYAITSSSRRLFNMQIFKKTSFLLLTPALLGLSHAFEPTVDMHVDDFDAIRGIAEYITSSAGLSSAKGALDHGLVSSDFELETVSPGGFMGHGRRLGATDEECGAFLAASLAPHLWECFDMAQTVLNLVKQENCKTSYDFSQANMHRICTNQCHDVLHKTLSTMSSAGCSASILKQSCNECASGEKCVGTKCRTVCSPSLPCPCSYACESGACIPPKNSEVTVNDMGVNGYKIALEYLCTTSPTNKNYCFADIFGVLNALDASTFCSKMKPIGCCTGTVFNFVTECATSNDTLSTSAGSISLTDLQQFCPEIDFKTPCANAPPLEPGACLDTYYLSSAWSMRASVVLTLALASLATVATFVF 432
            MGWSRYDVWQCYLLHHAHPSPRCYAHTCQIYIYIKEQGKVILRLTEVARYINLYLVLRSYDTIFCKPYRGLYAITSSSRRLFNMQIFKKTSFLLLTPALLGLSHAFEPTVDMHVDDFDAIRGIAEYITSSAGLSSAKGALDHGLVSSDFELETVSPGGFMGHGRRLGATDEECGAFLAASLAPHLWECFDMAQTVLNLVKQENCKTSYDFSQANMHRICTNQCHDVLHKTLSTMSSAGCSASILKQSCNECASGEKCVGTKCRTVCSPSLPCPCSYACESGACIPPKNSEVTVNDMGVNGYKIALEYLCTTSPTNKNYCFADIFGVLNALDASTFCSKMKPIGCCTGTVFNFVTECATSNDTLSTSAGSISLTDLQQFCPEIDFKTPCANAPPLEPGACLDTYYLSSAWSMRASVVLTLALASLATVATFVF
Sbjct:    1 MGWSRYDVWQCYLLHHAHPSPRCYAHTCQIYIYIKEQGKVILRLTEVARYINLYLVLRSYDTIFCKPYRGLYAITSSSRRLFNMQIFKKTSFLLLTPALLGLSHAFEPTVDMHVDDFDAIRGIAEYITSSAGLSSAKGALDHGLVSSDFELETVSPGGFMGHGRRLGATDEECGAFLAASLAPHLWECFDMAQTVLNLVKQENCKTSYDFSQANMHRICTNQCHDVLHKTLSTMSSAGCSASILKQSCNECASGEKCVGTKCRTVCSPSLPCPCSYACESGACIPPKNSEVTVNDMGVNGYKIALEYLCTTSPTNKNYCFADIFGVLNALDASTFCSKMKPIGCCTGTVFNFVTECATSNDTLSTSAGSISLTDLQQFCPEIDFKTPCANAPPLEPGACLDTYYLSSAWSMRASVVLTLALASLATVATFVF 432          
BLAST of EWM25017.1 vs. NCBI_GenBank
Match: gi|553188827|ref|XP_005854873.1| (hypothetical protein NGA_0377400 [Nannochloropsis gaditana CCMP526] >gi|422294181|gb|EKU21481.1| hypothetical protein NGA_0377400 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 166.007 bits (419), Expect = 2.755e-43
Identity = 89/267 (33.33%), Postives = 136/267 (50.94%), Query Frame = 0
Query:  162 HGRRLGATDEECGAFLAASLAPHLWECFDMAQTVLNLVKQE-NCKTSYDFSQANMHRICTNQCHDVLHKTLSTMSSAGCSA-SILKQSCNECASGEKCVGTKCRTVCSPSLPCPCSYACESGACIPPKNSEVTVNDMGVNGYKIALEYLCTTSP----------------------TNKNYCFADIFGVLNALDASTFCSKMKPIGCCTGTVFNFVTECATSNDTLSTSAGS-ISLTDLQQFCPEIDFKTPCANAPPLEPGACLDTY 403
            H +   A+ ++C +F+   L P   EC ++A+ +  +     +CK  YDFS+  +  +C+N+C+  + + L  M+ AGCSA  + K  C++C  G  CV   CR +CS + PC C+  C +G+C       +   DMG  GYKI+LE+LC  +P                        ++YCF+ +F  L  L     C K+   GCC GTV  +   C  +NDT+  + G+ + LT L  FCP++DFKT C+NAP    G C   Y
Sbjct:   59 HAQMAPASQDDCNSFMTLLLGPLTTECAELARDLQTVATTSTDCKRVYDFSKPKLDGMCSNKCYPTMVRALDGMAKAGCSADGVTKMMCDQCEEGTACVEGVCRPLCSATKPCACNDECVNGSCQSSDQGGLQRTDMGTFGYKISLEHLCLKAPLALPDTDAPDASTAAKEQQMALAKEDYCFSSVFNALEGL-TPDVCDKLAATGCCAGTVMQYGVTCGLANDTVKLNGGAPMQLTALANFCPDVDFKTKCSNAPAYADGMCKVGY 324          
BLAST of EWM25017.1 vs. NCBI_GenBank
Match: gi|585110950|gb|EWM28532.1| (hypothetical protein Naga_100009g41 [Nannochloropsis gaditana])

HSP 1 Score: 166.007 bits (419), Expect = 3.120e-43
Identity = 89/267 (33.33%), Postives = 136/267 (50.94%), Query Frame = 0
Query:  162 HGRRLGATDEECGAFLAASLAPHLWECFDMAQTVLNLVKQE-NCKTSYDFSQANMHRICTNQCHDVLHKTLSTMSSAGCSA-SILKQSCNECASGEKCVGTKCRTVCSPSLPCPCSYACESGACIPPKNSEVTVNDMGVNGYKIALEYLCTTSP----------------------TNKNYCFADIFGVLNALDASTFCSKMKPIGCCTGTVFNFVTECATSNDTLSTSAGS-ISLTDLQQFCPEIDFKTPCANAPPLEPGACLDTY 403
            H +   A+ ++C +F+   L P   EC ++A+ +  +     +CK  YDFS+  +  +C+N+C+  + + L  M+ AGCSA  + K  C++C  G  CV   CR +CS + PC C+  C +G+C       +   DMG  GYKI+LE+LC  +P                        ++YCF+ +F  L  L     C K+   GCC GTV  +   C  +NDT+  + G+ + LT L  FCP++DFKT C+NAP    G C   Y
Sbjct:   59 HAQMAPASQDDCNSFMTLLLGPLTTECAELARDLQTVATTSTDCKRVYDFSKPKLDGMCSNKCYPTMVRALDGMAKAGCSADGVTKMMCDQCEEGTACVEGVCRPLCSATKPCACNDECVNGSCQSSDQGGLQRTDMGTFGYKISLEHLCLKAPLALPDTDAPDASTAAKEQQMALAKEDYCFSSVFNALEGL-TPDVCDKLAATGCCAGTVMQYGVTCGLANDTVKLNGGAPMQLTALANFCPDVDFKTKCSNAPAYADGMCKVGY 324          
The following BLAST results are available for this feature:
BLAST of EWM25017.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 3
Match NameE-valueIdentityDescription
gi|585106652|gb|EWM25017.1|0.000e+0100.00hypothetical protein Naga_100068g6 [Nannochloropsi... [more]
gi|553188827|ref|XP_005854873.1|2.755e-4333.33hypothetical protein NGA_0377400 [Nannochloropsis ... [more]
gi|585110950|gb|EWM28532.1|3.120e-4333.33hypothetical protein Naga_100009g41 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5671rna5671Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications