EWM25017.1, cds5656 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM25017.1 vs. NCBI_GenBank
Match: gi|585106652|gb|EWM25017.1| (hypothetical protein Naga_100068g6 [Nannochloropsis gaditana]) HSP 1 Score: 898.656 bits (2321), Expect = 0.000e+0 Identity = 432/432 (100.00%), Postives = 432/432 (100.00%), Query Frame = 0
Query: 1 MGWSRYDVWQCYLLHHAHPSPRCYAHTCQIYIYIKEQGKVILRLTEVARYINLYLVLRSYDTIFCKPYRGLYAITSSSRRLFNMQIFKKTSFLLLTPALLGLSHAFEPTVDMHVDDFDAIRGIAEYITSSAGLSSAKGALDHGLVSSDFELETVSPGGFMGHGRRLGATDEECGAFLAASLAPHLWECFDMAQTVLNLVKQENCKTSYDFSQANMHRICTNQCHDVLHKTLSTMSSAGCSASILKQSCNECASGEKCVGTKCRTVCSPSLPCPCSYACESGACIPPKNSEVTVNDMGVNGYKIALEYLCTTSPTNKNYCFADIFGVLNALDASTFCSKMKPIGCCTGTVFNFVTECATSNDTLSTSAGSISLTDLQQFCPEIDFKTPCANAPPLEPGACLDTYYLSSAWSMRASVVLTLALASLATVATFVF 432
MGWSRYDVWQCYLLHHAHPSPRCYAHTCQIYIYIKEQGKVILRLTEVARYINLYLVLRSYDTIFCKPYRGLYAITSSSRRLFNMQIFKKTSFLLLTPALLGLSHAFEPTVDMHVDDFDAIRGIAEYITSSAGLSSAKGALDHGLVSSDFELETVSPGGFMGHGRRLGATDEECGAFLAASLAPHLWECFDMAQTVLNLVKQENCKTSYDFSQANMHRICTNQCHDVLHKTLSTMSSAGCSASILKQSCNECASGEKCVGTKCRTVCSPSLPCPCSYACESGACIPPKNSEVTVNDMGVNGYKIALEYLCTTSPTNKNYCFADIFGVLNALDASTFCSKMKPIGCCTGTVFNFVTECATSNDTLSTSAGSISLTDLQQFCPEIDFKTPCANAPPLEPGACLDTYYLSSAWSMRASVVLTLALASLATVATFVF
Sbjct: 1 MGWSRYDVWQCYLLHHAHPSPRCYAHTCQIYIYIKEQGKVILRLTEVARYINLYLVLRSYDTIFCKPYRGLYAITSSSRRLFNMQIFKKTSFLLLTPALLGLSHAFEPTVDMHVDDFDAIRGIAEYITSSAGLSSAKGALDHGLVSSDFELETVSPGGFMGHGRRLGATDEECGAFLAASLAPHLWECFDMAQTVLNLVKQENCKTSYDFSQANMHRICTNQCHDVLHKTLSTMSSAGCSASILKQSCNECASGEKCVGTKCRTVCSPSLPCPCSYACESGACIPPKNSEVTVNDMGVNGYKIALEYLCTTSPTNKNYCFADIFGVLNALDASTFCSKMKPIGCCTGTVFNFVTECATSNDTLSTSAGSISLTDLQQFCPEIDFKTPCANAPPLEPGACLDTYYLSSAWSMRASVVLTLALASLATVATFVF 432
BLAST of EWM25017.1 vs. NCBI_GenBank
Match: gi|553188827|ref|XP_005854873.1| (hypothetical protein NGA_0377400 [Nannochloropsis gaditana CCMP526] >gi|422294181|gb|EKU21481.1| hypothetical protein NGA_0377400 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 166.007 bits (419), Expect = 2.755e-43 Identity = 89/267 (33.33%), Postives = 136/267 (50.94%), Query Frame = 0
Query: 162 HGRRLGATDEECGAFLAASLAPHLWECFDMAQTVLNLVKQE-NCKTSYDFSQANMHRICTNQCHDVLHKTLSTMSSAGCSA-SILKQSCNECASGEKCVGTKCRTVCSPSLPCPCSYACESGACIPPKNSEVTVNDMGVNGYKIALEYLCTTSP----------------------TNKNYCFADIFGVLNALDASTFCSKMKPIGCCTGTVFNFVTECATSNDTLSTSAGS-ISLTDLQQFCPEIDFKTPCANAPPLEPGACLDTY 403
H + A+ ++C +F+ L P EC ++A+ + + +CK YDFS+ + +C+N+C+ + + L M+ AGCSA + K C++C G CV CR +CS + PC C+ C +G+C + DMG GYKI+LE+LC +P ++YCF+ +F L L C K+ GCC GTV + C +NDT+ + G+ + LT L FCP++DFKT C+NAP G C Y
Sbjct: 59 HAQMAPASQDDCNSFMTLLLGPLTTECAELARDLQTVATTSTDCKRVYDFSKPKLDGMCSNKCYPTMVRALDGMAKAGCSADGVTKMMCDQCEEGTACVEGVCRPLCSATKPCACNDECVNGSCQSSDQGGLQRTDMGTFGYKISLEHLCLKAPLALPDTDAPDASTAAKEQQMALAKEDYCFSSVFNALEGL-TPDVCDKLAATGCCAGTVMQYGVTCGLANDTVKLNGGAPMQLTALANFCPDVDFKTKCSNAPAYADGMCKVGY 324
BLAST of EWM25017.1 vs. NCBI_GenBank
Match: gi|585110950|gb|EWM28532.1| (hypothetical protein Naga_100009g41 [Nannochloropsis gaditana]) HSP 1 Score: 166.007 bits (419), Expect = 3.120e-43 Identity = 89/267 (33.33%), Postives = 136/267 (50.94%), Query Frame = 0
Query: 162 HGRRLGATDEECGAFLAASLAPHLWECFDMAQTVLNLVKQE-NCKTSYDFSQANMHRICTNQCHDVLHKTLSTMSSAGCSA-SILKQSCNECASGEKCVGTKCRTVCSPSLPCPCSYACESGACIPPKNSEVTVNDMGVNGYKIALEYLCTTSP----------------------TNKNYCFADIFGVLNALDASTFCSKMKPIGCCTGTVFNFVTECATSNDTLSTSAGS-ISLTDLQQFCPEIDFKTPCANAPPLEPGACLDTY 403
H + A+ ++C +F+ L P EC ++A+ + + +CK YDFS+ + +C+N+C+ + + L M+ AGCSA + K C++C G CV CR +CS + PC C+ C +G+C + DMG GYKI+LE+LC +P ++YCF+ +F L L C K+ GCC GTV + C +NDT+ + G+ + LT L FCP++DFKT C+NAP G C Y
Sbjct: 59 HAQMAPASQDDCNSFMTLLLGPLTTECAELARDLQTVATTSTDCKRVYDFSKPKLDGMCSNKCYPTMVRALDGMAKAGCSADGVTKMMCDQCEEGTACVEGVCRPLCSATKPCACNDECVNGSCQSSDQGGLQRTDMGTFGYKISLEHLCLKAPLALPDTDAPDASTAAKEQQMALAKEDYCFSSVFNALEGL-TPDVCDKLAATGCCAGTVMQYGVTCGLANDTVKLNGGAPMQLTALANFCPDVDFKTKCSNAPAYADGMCKVGY 324 The following BLAST results are available for this feature:
BLAST of EWM25017.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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