EWM25016.1, cds5653 (CDS) Nannochloropsis gaditana

Overview
NameEWM25016.1
Unique Namecds5653
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:533128..534228 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25016.1
Productputative cytosolic iron-sulfur protein assembly protein ciao1
Orig transcript idgnl|cribi|Naga_100068g3.2440.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:533128..534228 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0016043cellular component organization
GO:0016226iron-sulfur cluster assembly
Vocabulary: Cellular Component
TermDefinition
GO:0005829cytosol
GO:0097361CIA complex
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR028608CIAO1/Cia1
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR015943WD40/YVTN_repeat-like_dom
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep
Homology
BLAST of EWM25016.1 vs. NCBI_GenBank
Match: gi|585106651|gb|EWM25016.1| (putative cytosolic iron-sulfur protein assembly protein ciao1 [Nannochloropsis gaditana])

HSP 1 Score: 739.954 bits (1909), Expect = 0.000e+0
Identity = 366/366 (100.00%), Postives = 366/366 (100.00%), Query Frame = 0
Query:    1 MSLKRLSVLTGHTDRVWHVSWSPCGRYLASCGGDRAIRVWGAPTLSSGPRTDQDGDKDDRNEEEAGQEEGGGTWRLLATLGDGQTRTVRCCEWSPCGNMLAAVSFDSTCVIWELQPSRAQAGREMEWELAASVEGHEHEAKCVAWNRGGTLLATCSRDKSVWIWECLQDNDFECLSVLHGHDQDVKFVRFHPREDVLFSASYDDTLKVWEEEEDDWACVSTLKGHTSTVWGLSIGSRDDGMVSCSDDGTLIVWKAAGGAGRYDKWRQLTRLEAPGKATVYSVDWSRESGAIASGGADDAIRIYVEDVEDPQGWALDTPSFVCEADVPGAHDADVNCVRWNPVRPDLLASAGDDQAVRIWSFRRRGE 366
            MSLKRLSVLTGHTDRVWHVSWSPCGRYLASCGGDRAIRVWGAPTLSSGPRTDQDGDKDDRNEEEAGQEEGGGTWRLLATLGDGQTRTVRCCEWSPCGNMLAAVSFDSTCVIWELQPSRAQAGREMEWELAASVEGHEHEAKCVAWNRGGTLLATCSRDKSVWIWECLQDNDFECLSVLHGHDQDVKFVRFHPREDVLFSASYDDTLKVWEEEEDDWACVSTLKGHTSTVWGLSIGSRDDGMVSCSDDGTLIVWKAAGGAGRYDKWRQLTRLEAPGKATVYSVDWSRESGAIASGGADDAIRIYVEDVEDPQGWALDTPSFVCEADVPGAHDADVNCVRWNPVRPDLLASAGDDQAVRIWSFRRRGE
Sbjct:    1 MSLKRLSVLTGHTDRVWHVSWSPCGRYLASCGGDRAIRVWGAPTLSSGPRTDQDGDKDDRNEEEAGQEEGGGTWRLLATLGDGQTRTVRCCEWSPCGNMLAAVSFDSTCVIWELQPSRAQAGREMEWELAASVEGHEHEAKCVAWNRGGTLLATCSRDKSVWIWECLQDNDFECLSVLHGHDQDVKFVRFHPREDVLFSASYDDTLKVWEEEEDDWACVSTLKGHTSTVWGLSIGSRDDGMVSCSDDGTLIVWKAAGGAGRYDKWRQLTRLEAPGKATVYSVDWSRESGAIASGGADDAIRIYVEDVEDPQGWALDTPSFVCEADVPGAHDADVNCVRWNPVRPDLLASAGDDQAVRIWSFRRRGE 366          
BLAST of EWM25016.1 vs. NCBI_GenBank
Match: gi|567994647|gb|ETL44800.1| (hypothetical protein L916_04963 [Phytophthora parasitica] >gi|570332308|gb|ETO80256.1| hypothetical protein F444_05189 [Phytophthora parasitica P1976] >gi|570991470|gb|ETP49201.1| hypothetical protein F442_05210 [Phytophthora parasitica P10297] >gi|970662720|gb|KUG00080.1| cytosolic iron-sulfur protein assembly protein CIAO1 [Phytophthora nicotianae])

HSP 1 Score: 313.153 bits (801), Expect = 7.220e-102
Identity = 175/373 (46.92%), Postives = 219/373 (58.71%), Query Frame = 0
Query:    3 LKRLSVLTGHTDRVWHVSWSPCGRYLASCGGDRAIRVWGAPTLSSGPRTDQDGDKDDRNEEEAGQEEGGGTWRLLATLGDGQTRTVRCCEWSPCGNMLAAVSFDSTCVIWELQPSRAQAGREMEWELAASVEGHEHEAKCVAWNRGGTLLATCSRDKSVWIWECLQDNDFECLSVLHGHDQDVKFVRFHPREDVLFSASYDDTLKVWEEEEDDWACVSTLKGHTSTVWGLSIGSRDDGMVSCSDDGTLIVW------KAAGGAGRYDKWRQLTRLEAPGKATVYSVDWSRESGAIASGGADDAIRIYVEDVEDPQGWALDTP-SFVCEADVPGAHDADVNCVRWNP-------VRPDLLASAGDDQAVRIWSF 361
            L+++  L GH++R WHVSW   G+ LASC GDR IR+W A                             G W  +  L D QTRT+R CEWSP G  LA+VSFD T VIWE Q S         +E+ +S+EGHE E K VAW+  G+ LATCSRDKSVWIWE   D DFEC+SVLHGH QDVKFV +HP+ED+L SASYDDT++VW E +DDW C  TL GHT+TVWG+++ S+   M S SDD  +++W      K     G   +WRQ   L    + T++SVDWS+    +A+G AD+AIR++       QG   DTP SF        AH +D+NCVRW P        +  LLASA DD  VRIWS 
Sbjct:    4 LEQVCALEGHSERAWHVSWRFDGKLLASCSGDRTIRLWAA--------------------------NNSGVWECVGILEDAQTRTIRACEWSPDGRYLASVSFDGTTVIWEKQGS--------SYEVISSLEGHESEVKSVAWSPSGSYLATCSRDKSVWIWEADADTDFECISVLHGHTQDVKFVAWHPKEDLLVSASYDDTIRVWAENDDDWYCKETLTGHTATVWGVALSSQGTEMASVSDDTDVVIWQYDPNSKEVNEDGSPKQWRQKFTLPNCHERTIFSVDWSKHGHYLATGAADNAIRVF-------QGQPSDTPTSFDLAIHQKEAHASDINCVRWCPQLIEDKGKKALLLASASDDALVRIWSM 335          
BLAST of EWM25016.1 vs. NCBI_GenBank
Match: gi|675187301|ref|XP_008902535.1| (hypothetical protein PPTG_09352 [Phytophthora parasitica INRA-310] >gi|568097842|gb|ETN12584.1| hypothetical protein PPTG_09352 [Phytophthora parasitica INRA-310])

HSP 1 Score: 313.153 bits (801), Expect = 7.299e-102
Identity = 175/373 (46.92%), Postives = 219/373 (58.71%), Query Frame = 0
Query:    3 LKRLSVLTGHTDRVWHVSWSPCGRYLASCGGDRAIRVWGAPTLSSGPRTDQDGDKDDRNEEEAGQEEGGGTWRLLATLGDGQTRTVRCCEWSPCGNMLAAVSFDSTCVIWELQPSRAQAGREMEWELAASVEGHEHEAKCVAWNRGGTLLATCSRDKSVWIWECLQDNDFECLSVLHGHDQDVKFVRFHPREDVLFSASYDDTLKVWEEEEDDWACVSTLKGHTSTVWGLSIGSRDDGMVSCSDDGTLIVW------KAAGGAGRYDKWRQLTRLEAPGKATVYSVDWSRESGAIASGGADDAIRIYVEDVEDPQGWALDTP-SFVCEADVPGAHDADVNCVRWNP-------VRPDLLASAGDDQAVRIWSF 361
            L+++  L GH++R WHVSW   G+ LASC GDR IR+W A                             G W  +  L D QTRT+R CEWSP G  LA+VSFD T VIWE Q S         +E+ +S+EGHE E K VAW+  G+ LATCSRDKSVWIWE   D DFEC+SVLHGH QDVKFV +HP+ED+L SASYDDT++VW E +DDW C  TL GHT+TVWG+++ S+   M S SDD  +++W      K     G   +WRQ   L    + T++SVDWS+    +A+G AD+AIR++       QG   DTP SF        AH +D+NCVRW P        +  LLASA DD  VRIWS 
Sbjct:    4 LEQVCALEGHSERAWHVSWRFDGKLLASCSGDRTIRLWAA--------------------------NNSGVWECVGILEDAQTRTIRACEWSPDGRYLASVSFDGTTVIWEKQGS--------SYEVISSLEGHESEVKSVAWSPSGSYLATCSRDKSVWIWEADADTDFECISVLHGHTQDVKFVAWHPKEDLLVSASYDDTIRVWAENDDDWYCKKTLTGHTATVWGVALSSQGTEMASVSDDTDVVIWQYDPNSKEVNEDGSPKQWRQKFTLPNCHERTIFSVDWSKHGHYLATGAADNAIRVF-------QGQPSDTPTSFDLAIHQKEAHASDINCVRWCPQLIEDKGKKALLLASASDDALVRIWSM 335          
BLAST of EWM25016.1 vs. NCBI_GenBank
Match: gi|566028587|gb|ETI51498.1| (hypothetical protein F443_05153 [Phytophthora parasitica P1569] >gi|567965932|gb|ETK91393.1| hypothetical protein L915_05013 [Phytophthora parasitica] >gi|568023910|gb|ETL97955.1| hypothetical protein L917_04862 [Phytophthora parasitica] >gi|568054332|gb|ETM51117.1| hypothetical protein L914_04968 [Phytophthora parasitica] >gi|570956265|gb|ETP21278.1| hypothetical protein F441_05154 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 312.768 bits (800), Expect = 1.080e-101
Identity = 175/373 (46.92%), Postives = 219/373 (58.71%), Query Frame = 0
Query:    3 LKRLSVLTGHTDRVWHVSWSPCGRYLASCGGDRAIRVWGAPTLSSGPRTDQDGDKDDRNEEEAGQEEGGGTWRLLATLGDGQTRTVRCCEWSPCGNMLAAVSFDSTCVIWELQPSRAQAGREMEWELAASVEGHEHEAKCVAWNRGGTLLATCSRDKSVWIWECLQDNDFECLSVLHGHDQDVKFVRFHPREDVLFSASYDDTLKVWEEEEDDWACVSTLKGHTSTVWGLSIGSRDDGMVSCSDDGTLIVW------KAAGGAGRYDKWRQLTRLEAPGKATVYSVDWSRESGAIASGGADDAIRIYVEDVEDPQGWALDTP-SFVCEADVPGAHDADVNCVRWNP-------VRPDLLASAGDDQAVRIWSF 361
            L+++  L GH++R WHVSW   G+ LASC GDR IR+W A                             G W  +  L D QTRT+R CEWSP G  LA+VSFD T VIWE Q S         +E+ +S+EGHE E K VAW+  G+ LATCSRDKSVWIWE   D DFEC+SVLHGH QDVKFV +HP+ED+L SASYDDT++VW E +DDW C  TL GHT+TVWG+++ S+   M S SDD  +++W      K     G   +WRQ   L    + T++SVDWS+    +A+G AD+AIR++       QG   DTP SF        AH +D+NCVRW P        +  LLASA DD  VRIWS 
Sbjct:    4 LEQVCALEGHSERAWHVSWRFDGKLLASCSGDRTIRLWAA--------------------------NNSGVWECVGILEDAQTRTIRACEWSPDGRYLASVSFDGTTVIWEKQGS--------SYEVISSLEGHESEVKSVAWSPSGSYLATCSRDKSVWIWEADVDTDFECISVLHGHTQDVKFVAWHPKEDLLVSASYDDTIRVWAENDDDWYCKETLTGHTATVWGVALSSQGTEMASVSDDTDVVIWQYDPNSKEVNEDGSPKQWRQKFTLPNCHERTIFSVDWSKHGHYLATGAADNAIRVF-------QGQPSDTPTSFDLAIHQKEAHASDINCVRWCPQLIEDKGKKALLLASASDDALVRIWSM 335          
BLAST of EWM25016.1 vs. NCBI_GenBank
Match: gi|813198312|ref|XP_012208739.1| (hypothetical protein SPRG_13246 [Saprolegnia parasitica CBS 223.65] >gi|641526162|gb|KDO20550.1| hypothetical protein SPRG_13246 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 308.916 bits (790), Expect = 2.265e-100
Identity = 167/365 (45.75%), Postives = 213/365 (58.36%), Query Frame = 0
Query:    1 MSLKRLSVLTGHTDRVWHVSWSPCGRYLASCGGDRAIRVWGAPTLSSGPRTDQDGDKDDRNEEEAGQEEGGGTWRLLATLGDGQTRTVRCCEWSPCGNMLAAVSFDSTCVIWELQPSRAQAGREMEWELAASVEGHEHEAKCVAWNRGGTLLATCSRDKSVWIWECLQDNDFECLSVLHGHDQDVKFVRFHPREDVLFSASYDDTLKVWEEEEDDWACVSTLKGHTSTVWGLSIGSRDDGMVSCSDDGTLIVWKAAGGA---GRYDKWRQLTRLEAPGKATVYSVDWSRESGAIASGGADDAIRIYVED-VEDPQGWALDTPSFVCEADVPGAHDADVNCVRWNPVRPDLLASAGDDQAVRIWSF 361
            M L+ ++VL GH + VWH SWSP G  LA+CG D+ +R+W                        A    G   W  +ATL D Q RT+R CEWSP G  +A+VSFD+T VIWE         R   +E+ AS+EGHE E K +AW+  G+ LATCSRDKSVWIWE   D DFEC+SVLHGH QDVKFV++HP +D+LFS SYDDT+ VW E +DDW C  TLKGH STVWG+++ +  + M SCSDD  +++W+   G    GR   W+ L  LE   + +V+SVDW      I +GG DD +R++ +D  E P         F        AH  DVNCVRW+   P LL S GDD   R+W  
Sbjct:    1 MHLEEVAVLVGHAECVWHASWSPDGSLLATCGSDKTVRIW------------------------ACARNGATHWDCVATLEDAQNRTIRACEWSPNGQFIASVSFDATTVIWER--------RGDVYEVIASLEGHESEVKSIAWSPSGSYLATCSRDKSVWIWEADPDTDFECISVLHGHSQDVKFVQWHPTDDILFSTSYDDTICVWAESDDDWYCKETLKGHASTVWGVTLRADGERMASCSDDTNVLLWQHQPGTSADGRPTSWQPLQALEGFHERSVFSVDWHPTLNCIVTGGGDDGLRLFAQDKAESP---------FQLAYTHAHAHAGDVNCVRWSKRDPTLLVSTGDDCVARLWRL 324          
BLAST of EWM25016.1 vs. NCBI_GenBank
Match: gi|545354922|ref|XP_005643287.1| (WD40 repeat-like protein [Coccomyxa subellipsoidea C-169] >gi|384245248|gb|EIE18743.1| WD40 repeat-like protein [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 306.605 bits (784), Expect = 4.218e-99
Identity = 181/372 (48.66%), Postives = 221/372 (59.41%), Query Frame = 0
Query:    3 LKRLSVLTGHTDRVWHVSWSPCGRYLASCGGDRAIRVWGAPTLSSGPRTDQDGDKDDRNEEEAGQEEGGGTWRLLATLGDGQTRTVRCCEWSPCGNMLAAVSFDSTCVIWELQPSRAQAGREMEWELAASVEGHEHEAKCVAWNRGGTLLATCSRDKSVWIWECLQDNDFECLSVLHGHDQDVKFVRFHPREDVLFSASYDDTLKVWEEEEDDWACVSTLK----GHTSTVWGLSIGSRDDGMVSCSDDGTLIVWKAAGGAGRYDKWRQLTRLEAPGKATVYSVDWSRESGAIASGGADDAIRIYVEDVE-----DPQGWALDTPSFVCEADVPGAHDADVNCVRWNPVRPDLLASAGDDQAVRIWSFRRRG 365
            L ++ VL GHTDR WHV+WSP G  LASC GD+ +R+W                       + G EE    W   ATL + QTRT+RCC WSP G  LA  SFD+T  IWE+Q           WE  A +EGHE+E K VAW+  G+L+ATCSRDKSVWIWE L  N++EC+ V  GH QDVK V +HP+ ++L S SYDDT+K+W E +D+W C  TL     GHTSTVWGL+     + MVSCSDD TL VW      G    WR LT +    + T++SVDWS    AIASG  D+ I ++ E+       DP    L  PSF   A    AH ADVNCVRWNP  P LLASAGDD +VR+W +RRRG
Sbjct:    4 LTQIQVLEGHTDRAWHVAWSPTGETLASCSGDKTVRLW--------------------TRTQPGSEE----WVCSATLEEAQTRTIRCCSWSPDGRSLATASFDATTAIWEVQGGV--------WEQVALLEGHENEVKGVAWSPSGSLIATCSRDKSVWIWEALPGNEYECVDVKQGHTQDVKAVAWHPKGEILVSCSYDDTIKLWRESDDEWICEQTLSGPGIGHTSTVWGLAFEESGERMVSCSDDCTLRVWSCTSKDGEA-WWRLLTTVSGSHERTIFSVDWSSSG-AIASGSGDNTICVHEEEASSSADIDP----LQKPSFTLAARQREAHPADVNCVRWNPADPTLLASAGDDGSVRLWRYRRRG 337          
BLAST of EWM25016.1 vs. NCBI_GenBank
Match: gi|1117466141|ref|XP_019425684.1| (PREDICTED: protein CIA1-like [Lupinus angustifolius])

HSP 1 Score: 305.834 bits (782), Expect = 7.028e-99
Identity = 175/377 (46.42%), Postives = 216/377 (57.29%), Query Frame = 0
Query:    1 MSLKRLSVLTGHTDRVWHVSWSPCGRY------LASCGGDRAIRVWGAPTLSSGPRTDQDGDKDDRNEEEAGQEEGGGTWRLLATLGDGQTRTVRCCEWSPCGNMLAAVSFDSTCVIWELQPSRAQAGREMEWELAASVEGHEHEAKCVAWNRGGTLLATCSRDKSVWIWECLQDNDFECLSVLHGHDQDVKFVRFHPREDVLFSASYDDTLKVW--EEEEDDWACVSTL----KGHTSTVWGLSIGSRDDGMVSCSDDGTLIVWKAAG----GAGRYDKWRQLTRLEAPGKATVYSVDWSRESGAIASGGADDAIRIYVEDVEDPQGWALDTPSFVCEADVPGAHDADVNCVRWNPVRPDLLASAGDDQAVRIWSF 361
            M LK +  L GHTDRVW + W+P   +       ASC GD+ +RVW   TLSS   T +                        A L +  TRTVR C WSP G +LA  SFD+T  IWE        G + E    +++EGHE+E KCV WN  G LLATCSRDKSVWIWE  Q N+ EC+SVL GH QDVK V++HP  DVLFS SYD+T+KVW  E E DDW CV TL     GHTSTVW +S  +  D MV+CSDD TL VW+ A       G++  WR L  L      T++SV WSRE G +ASG ADDAIR++V++ E   G     P F   +    AH  D+NCV+W+P    LLASA DD  +++W  
Sbjct:    6 MELKEIQTLEGHTDRVWSLDWNPATGHSGIPLLFASCSGDKTVRVWEQNTLSSNLFTCK------------------------AVLDETHTRTVRSCAWSPSGKLLATASFDATTAIWE------NVGGDFE--CVSTLEGHENEVKCVCWNASGNLLATCSRDKSVWIWEVEQGNEVECVSVLQGHTQDVKMVKWHPTMDVLFSCSYDNTVKVWADEGESDDWQCVQTLGEPNNGHTSTVWAISFNASGDKMVTCSDDLTLKVWETANIGIQSGGQFAPWRHLCTLTGYHDRTIFSVHWSRE-GILASGAADDAIRLFVDNNESEVG----GPLFKLLSKKEKAHGMDINCVQWSPGEKPLLASASDDGTIKVWEL 345          
BLAST of EWM25016.1 vs. NCBI_GenBank
Match: gi|1102692652|gb|OIV92218.1| (hypothetical protein TanjilG_31137 [Lupinus angustifolius])

HSP 1 Score: 305.449 bits (781), Expect = 8.556e-99
Identity = 175/377 (46.42%), Postives = 216/377 (57.29%), Query Frame = 0
Query:    1 MSLKRLSVLTGHTDRVWHVSWSPCGRY------LASCGGDRAIRVWGAPTLSSGPRTDQDGDKDDRNEEEAGQEEGGGTWRLLATLGDGQTRTVRCCEWSPCGNMLAAVSFDSTCVIWELQPSRAQAGREMEWELAASVEGHEHEAKCVAWNRGGTLLATCSRDKSVWIWECLQDNDFECLSVLHGHDQDVKFVRFHPREDVLFSASYDDTLKVW--EEEEDDWACVSTL----KGHTSTVWGLSIGSRDDGMVSCSDDGTLIVWKAAG----GAGRYDKWRQLTRLEAPGKATVYSVDWSRESGAIASGGADDAIRIYVEDVEDPQGWALDTPSFVCEADVPGAHDADVNCVRWNPVRPDLLASAGDDQAVRIWSF 361
            M LK +  L GHTDRVW + W+P   +       ASC GD+ +RVW   TLSS   T +                        A L +  TRTVR C WSP G +LA  SFD+T  IWE        G + E    +++EGHE+E KCV WN  G LLATCSRDKSVWIWE  Q N+ EC+SVL GH QDVK V++HP  DVLFS SYD+T+KVW  E E DDW CV TL     GHTSTVW +S  +  D MV+CSDD TL VW+ A       G++  WR L  L      T++SV WSRE G +ASG ADDAIR++V++ E   G     P F   +    AH  D+NCV+W+P    LLASA DD  +++W  
Sbjct:    1 MELKEIQTLEGHTDRVWSLDWNPATGHSGIPLLFASCSGDKTVRVWEQNTLSSNLFTCK------------------------AVLDETHTRTVRSCAWSPSGKLLATASFDATTAIWE------NVGGDFE--CVSTLEGHENEVKCVCWNASGNLLATCSRDKSVWIWEVEQGNEVECVSVLQGHTQDVKMVKWHPTMDVLFSCSYDNTVKVWADEGESDDWQCVQTLGEPNNGHTSTVWAISFNASGDKMVTCSDDLTLKVWETANIGIQSGGQFAPWRHLCTLTGYHDRTIFSVHWSRE-GILASGAADDAIRLFVDNNESEVG----GPLFKLLSKKEKAHGMDINCVQWSPGEKPLLASASDDGTIKVWEL 340          
BLAST of EWM25016.1 vs. NCBI_GenBank
Match: gi|635370995|emb|CCI40898.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 299.671 bits (766), Expect = 2.045e-96
Identity = 166/364 (45.60%), Postives = 218/364 (59.89%), Query Frame = 0
Query:    8 VLTGHTDRVWHVSWSPCGRYLASCGGDRAIRVWGAPTLSSGPRTDQDGDKDDRNEEEAGQEEGGGTWRLLATLGDGQTRTVRCCEWSPCGNMLAAVSFDSTCVIWELQPSRAQAGREMEWELAASVEGHEHEAKCVAWNRGGTLLATCSRDKSVWIWECLQDNDFECLSVLHGHDQDVKFVRFHPREDVLFSASYDDTLKVWEEEEDDWACVSTLKGHTSTVWGLSIGSRDDGMVSCSDDGTLIVWKAAGGA------GRYDKWRQLTRLEAPGKATVYSVDWSRESGAIASGGADDAIRIYV-EDVEDPQGWALDTPSFVCEADVPGAHDADVNCVRWNPVRPD----LLASAGDDQAVRIWS 360
            VL GH+DR+WH+SW   G  +ASC GDR IR+W        P  D +  K               TW+ +A L D Q RT+R CEWS  G  +A VSFD+T VIWE Q           +++ AS+EGHE E K VAW+  G+ LATCSRDKSVWIW+   + DFEC+SVLHGH QDVK V++HP  D+LFSASYDDT++VW+E EDDW C  TL+GH STVWG+++ ++ D + SCSDD T+I+W+    +      G    W+    L      T+YS+DW      I +G  DD+IRI+    + D    +     +V ++    AH  DVNCVRW+PVR      LLASAGDD A+R+W+
Sbjct:    7 VLKGHSDRIWHISWRKDGNAIASCSGDRTIRIWK-------PLMDMNLQK--------------MTWQCVAILEDAQNRTIRACEWSNDGKYIATVSFDATAVIWEDQNG--------SFDVIASLEGHESEIKSVAWSPSGSYLATCSRDKSVWIWDADPETDFECISVLHGHTQDVKSVKWHPTSDILFSASYDDTIRVWDENEDDWYCKQTLQGHESTVWGITLNAKGDLLASCSDDNTIIIWRFCETSQDVQIDGEPMLWKMDRTLSGFHTRTIYSIDWEPSHNYIVTGAGDDSIRIFHWSSLGDTSTRSQCDSIYVQKS----AHGGDVNCVRWSPVRDPAGNLLLASAGDDDALRLWN 337          

HSP 2 Score: 74.7146 bits (182), Expect = 2.609e-11
Identity = 71/281 (25.27%), Postives = 115/281 (40.93%), Query Frame = 0
Query:   83 GQTRTVRCCEWSPCGNMLAAVSFDSTCVIWELQPSRAQAGREMEWELAASVEGHEHEA-KCVAWNRGGTLLATCSRDKSVWIWECLQDNDFECLSVLHGHDQDVKFVRFHPREDVLFSASYDDTLKVWEEE-EDDWACVSTLKGHTSTVWGLSIGSRDDGMVSCSDDGTLIVWKAAGGAGRYDKWRQLTRLEAPGKATVYSVDWSRESGAIASGGADDAIRIYVEDVEDPQGWALDTPSFVCEADVPGAHDADVNCVRWNPVRPDLLASAGDDQAVRIWSF 361
            G +  +    W   GN +A+ S D T  IW  +P      ++M W+  A +E  ++   +   W+  G  +AT S D +  IWE  Q+  F+ ++ L GH+ ++K V + P    L + S D ++ +W+ + E D+ C+S L GHT                                                    V SV W   S  + S   DD IR++ E+ +D          + C+  + G H++ V  +  N  + DLLAS  DD  + IW F
Sbjct:   10 GHSDRIWHISWRKDGNAIASCSGDRTIRIW--KPLMDMNLQKMTWQCVAILEDAQNRTIRACEWSNDGKYIATVSFDATAVIWE-DQNGSFDVIASLEGHESEIKSVAWSPSGSYLATCSRDKSVWIWDADPETDFECISVLHGHTQD--------------------------------------------------VKSVKWHPTSDILFSASYDDTIRVWDENEDD----------WYCKQTLQG-HESTVWGITLN-AKGDLLASCSDDNTIIIWRF 225          

HSP 3 Score: 72.7886 bits (177), Expect = 1.035e-10
Identity = 52/220 (23.64%), Postives = 96/220 (43.64%), Query Frame = 0
Query:    2 SLKRLSVLTGHTDRVWHVSWSPCGRYLASCGGDRAIRVWGAPTLSSGPRTDQDGDKDDRNEEEAGQEEGGGTWRLLATLGDGQTRTVRCCEWSPCGNMLAAVSFDSTCVIWELQPSRAQAGREMEWELAASVEGHEHEAKCVAWNRGGTLLATCSRDKSVWIW---ECLQDNDFECLSVLHG--------HDQDVKFVRFHPREDVLFSASYDDTLKVWE 210
            S   ++ L GH   +  V+WSP G YLA+C  D+++ +W A      P TD +                        ++  G T+ V+  +W P  ++L + S+D T  +W+          E +W    +++GHE     +  N  G LLA+CS D ++ IW   E  QD   +   +L          H + +  + + P  + + + + DD+++++ 
Sbjct:   96 SFDVIASLEGHESEIKSVAWSPSGSYLATCSRDKSVWIWDA-----DPETDFE----------------------CISVLHGHTQDVKSVKWHPTSDILFSASYDDTIRVWD--------ENEDDWYCKQTLQGHESTVWGITLNAKGDLLASCSDDNTIIIWRFCETSQDVQIDGEPMLWKMDRTLSGFHTRTIYSIDWEPSHNYIVTGAGDDSIRIFH 280          
BLAST of EWM25016.1 vs. NCBI_GenBank
Match: gi|698789242|ref|XP_009827653.1| (hypothetical protein H257_04736 [Aphanomyces astaci] >gi|574117500|gb|ETV82982.1| hypothetical protein H257_04736 [Aphanomyces astaci])

HSP 1 Score: 298.901 bits (764), Expect = 2.603e-96
Identity = 164/363 (45.18%), Postives = 211/363 (58.13%), Query Frame = 0
Query:    1 MSLKRLSVLTGHTDRVWHVSWSPCGRYLASCGGDRAIRVWGAPTLSSGPRTDQDGDKDDRNEEEAGQEEGGGTWRLLATLGDGQTRTVRCCEWSPCGNMLAAVSFDSTCVIWELQPSRAQAGREMEWELAASVEGHEHEAKCVAWNRGGTLLATCSRDKSVWIWECLQDNDFECLSVLHGHDQDVKFVRFHPREDVLFSASYDDTLKVWEEEEDDWACVSTLKGHTSTVWGLSIGSRDDGMVSCSDDGTLIVWK----AAGGAGRYDKWRQLTRLEAPGKATVYSVDWSRESGAIASGGADDAIRIYVEDVEDPQGWALDTPSFVCEADVPGAHDADVNCVRWNPVRPDLLASAGDDQAVRIW 359
            + L+ ++VL GH++ VWH SW P G  LA+CG D+ IR+W     S   +T QD                   W  +ATL D Q RT+R CEWS  G  +A+VSFD+T VIWE Q           +E+ AS+EGHE E K VAW+  G+ LATCSRDKSVWIWE   D DFEC+SVLHGH QDVKFV +HP ED+LFS SYDDT+ VW E +DDWACV TL GH STVW  +  +    + +CSDD ++++W+         GR  +W Q+  L       V+S+ W+  +  +A+G  DD IR++  +          T  F        AH  DVNCVRW+P  P LL SAGDD  VR+W
Sbjct:    3 VRLEEVAVLAGHSECVWHASWHPNGSLLATCGSDKTIRIWSP---SRNAKTPQDA------------------WDCVATLEDAQGRTIRACEWSRNGQYIASVSFDATTVIWEKQGDV--------YEVIASLEGHESEVKSVAWSPSGSYLATCSRDKSVWIWEADADTDFECVSVLHGHSQDVKFVTWHPDEDLLFSTSYDDTVCVWAERDDDWACVETLTGHKSTVWAATTDATGLRLATCSDDKSVLLWQRHPATLTADGRSSEWTQVDALTGYHPRAVFSIHWNISTNVLATGCGDDGIRLFQANPS--------TAKFELVYQQVHAHAGDVNCVRWSPTDPALLVSAGDDANVRLW 328          
The following BLAST results are available for this feature:
BLAST of EWM25016.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106651|gb|EWM25016.1|0.000e+0100.00putative cytosolic iron-sulfur protein assembly pr... [more]
gi|567994647|gb|ETL44800.1|7.220e-10246.92hypothetical protein L916_04963 [Phytophthora para... [more]
gi|675187301|ref|XP_008902535.1|7.299e-10246.92hypothetical protein PPTG_09352 [Phytophthora para... [more]
gi|566028587|gb|ETI51498.1|1.080e-10146.92hypothetical protein F443_05153 [Phytophthora para... [more]
gi|813198312|ref|XP_012208739.1|2.265e-10045.75hypothetical protein SPRG_13246 [Saprolegnia paras... [more]
gi|545354922|ref|XP_005643287.1|4.218e-9948.66WD40 repeat-like protein [Coccomyxa subellipsoidea... [more]
gi|1117466141|ref|XP_019425684.1|7.028e-9946.42PREDICTED: protein CIA1-like [Lupinus angustifoliu... [more]
gi|1102692652|gb|OIV92218.1|8.556e-9946.42hypothetical protein TanjilG_31137 [Lupinus angust... [more]
gi|635370995|emb|CCI40898.1|2.045e-9645.60unnamed protein product [Albugo candida][more]
gi|698789242|ref|XP_009827653.1|2.603e-9645.18hypothetical protein H257_04736 [Aphanomyces astac... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5668rna5668Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications