EWM25042.1, cds5647 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25042.1 vs. NCBI_GenBank
Match: gi|585106678|gb|EWM25042.1| (dead-box atp-dependent rna helicase 50-like protein [Nannochloropsis gaditana]) HSP 1 Score: 922.924 bits (2384), Expect = 0.000e+0 Identity = 453/453 (100.00%), Postives = 453/453 (100.00%), Query Frame = 0
Query: 1 MGAEEGEKEVEPTEYYEERFREGGLRTEADEGGLDEERAARLADTFFFSRKTFEEIGASPEARAALGSMGIARPSKVQTIAYPHILQGSSCIIAEQTGSGKTLAYLLPLLQRLRGLEGGGEGKGGLGRAPPKSPRVVVLAPTAELAAQVASVARAMTRHMPLRVCCVTGGKNPRTQGEMLKQGVDVLIGTPGRVQYLLEENKVLLGEMQALVLDEVDVMFLDDSFDLAVIGAAAPAHTQFLFVTATLPVPVADQIAREFPGVKKLWGPGLHKIAPQVEEVLVDCSGPWEEERNEETGFVRKRDMLVQNLLKHPAPRSLVFCNSIPTCRKVENALRRADRQEKRWQVLAYHSAVNPQDRQKNLDIFSSRVERPLIMVCTDRTSRGVDFDTADVQHVVLFDFPRDPSEYVRRVGRTGRAGRVGRVTALVLGRQVGLARSIMEGNSKGARVHPVPN 453
MGAEEGEKEVEPTEYYEERFREGGLRTEADEGGLDEERAARLADTFFFSRKTFEEIGASPEARAALGSMGIARPSKVQTIAYPHILQGSSCIIAEQTGSGKTLAYLLPLLQRLRGLEGGGEGKGGLGRAPPKSPRVVVLAPTAELAAQVASVARAMTRHMPLRVCCVTGGKNPRTQGEMLKQGVDVLIGTPGRVQYLLEENKVLLGEMQALVLDEVDVMFLDDSFDLAVIGAAAPAHTQFLFVTATLPVPVADQIAREFPGVKKLWGPGLHKIAPQVEEVLVDCSGPWEEERNEETGFVRKRDMLVQNLLKHPAPRSLVFCNSIPTCRKVENALRRADRQEKRWQVLAYHSAVNPQDRQKNLDIFSSRVERPLIMVCTDRTSRGVDFDTADVQHVVLFDFPRDPSEYVRRVGRTGRAGRVGRVTALVLGRQVGLARSIMEGNSKGARVHPVPN
Sbjct: 1 MGAEEGEKEVEPTEYYEERFREGGLRTEADEGGLDEERAARLADTFFFSRKTFEEIGASPEARAALGSMGIARPSKVQTIAYPHILQGSSCIIAEQTGSGKTLAYLLPLLQRLRGLEGGGEGKGGLGRAPPKSPRVVVLAPTAELAAQVASVARAMTRHMPLRVCCVTGGKNPRTQGEMLKQGVDVLIGTPGRVQYLLEENKVLLGEMQALVLDEVDVMFLDDSFDLAVIGAAAPAHTQFLFVTATLPVPVADQIAREFPGVKKLWGPGLHKIAPQVEEVLVDCSGPWEEERNEETGFVRKRDMLVQNLLKHPAPRSLVFCNSIPTCRKVENALRRADRQEKRWQVLAYHSAVNPQDRQKNLDIFSSRVERPLIMVCTDRTSRGVDFDTADVQHVVLFDFPRDPSEYVRRVGRTGRAGRVGRVTALVLGRQVGLARSIMEGNSKGARVHPVPN 453
BLAST of EWM25042.1 vs. NCBI_GenBank
Match: gi|873234921|emb|CEM01514.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 466.848 bits (1200), Expect = 2.229e-159 Identity = 235/410 (57.32%), Postives = 295/410 (71.95%), Query Frame = 0
Query: 46 FFFSRKTFEEIGASPEARAALGSMGIARPSKVQTIAYPHILQGSSCIIAEQTGSGKTLAYLLPLLQRLRGLEGGGEGKGGLGRAPPKSPRVVVLAPTAELAAQVASVARAMTRHMPLRVCCVTGGKNPRTQGEML-KQGVDVLIGTPGRVQYLLEENKVLLGEMQALVLDEVDVMFLDDSFDLAVIGAAAPAHTQFLFVTATLPVPVADQIAREFPGVKKLWGPGLHKIAPQVEEVLVDCSGPWEEERNEETGFVRKRDMLVQNLLKHPAPRSLVFCNSIPTCRKVENALRRADRQEKRWQVLAYHSAVNPQDRQKNLDIFS-SRVERPLIMVCTDRTSRGVDFDTADVQHVVLFDFPRDPSEYVRRVGRTGRAGRVGRVTALVLGRQVGLARSIMEGNSKGARVHPVPN 453
FFSRK F +IGAS E A+ G RPSK+Q ++Y +L G +C++A+QTGSGKTLAYL PLLQRLR E + G RA P SPRVVVLAPT ELA+QV+ V + +T P+R CVTGG N R Q M+ + GVD+L+ TPGR++ +L+ K+ L ++ ALVLDEVDV+FLDD+F L IG A TQF+FVTAT+P V QI +EFP ++++ GPGLH+IAP VEEVLVDCSGP +E +NE T F RKR L L K PR+L+FCNSI CR+VENALRR DR KR+QVL YHS ++ + R++ + F+ P+++V TD+ SRGVDFD +V HV+LFDFPRDPSEYVRRVGRT RAGR GRVT+LVLGRQV LAR +ME N +G R+H VP
Sbjct: 39 LFFSRKQFADIGASDEMIEAMSIAGAKRPSKIQALSYRTVLSGKNCVVADQTGSGKTLAYLAPLLQRLRD-----EERAGKPRALPGSPRVVVLAPTTELASQVSRVLKKLTAVAPVRTACVTGGYNARDQMRMVERSGVDILVATPGRLRSMLQMGKLNLHQLSALVLDEVDVLFLDDTFLLQPIGEATAPSTQFVFVTATIPTSVFAQIKQEFPDLRRIMGPGLHRIAPGVEEVLVDCSGPKDEAKNEFTAFERKRKALAGQLDKVVVPRTLIFCNSIENCRRVENALRRLDRGRKRFQVLPYHSGIDNERRREIFNAFTRENFLIPMVLVSTDQASRGVDFDQVEVGHVILFDFPRDPSEYVRRVGRTARAGRAGRVTSLVLGRQVSLARELMEVNRRGERIHDVPK 443
BLAST of EWM25042.1 vs. NCBI_GenBank
Match: gi|298710365|emb|CBJ31982.1| (DEAD box helicase [Ectocarpus siliculosus]) HSP 1 Score: 444.891 bits (1143), Expect = 2.478e-148 Identity = 234/424 (55.19%), Postives = 299/424 (70.52%), Query Frame = 0
Query: 28 EADEGGLDEERAARLADTFFFSRKTFEEIGASPEARAALGSMGIARPSKVQTIAYPHILQGSSCIIAEQTGSGKTLAYLLPLLQRLRGLEGGGEGKGGLGRAPPKSPRVVVLAPTAELAAQVASVARAMTRHMPLRVCCVTGG--KNPRTQGEMLKQGVDVLIGTPGRVQYLLEENKVLLGEMQALVLDEVDVMFLDDSFDLAVIGAAAPAHTQFLFVTATLPVPVADQIAREFPGVKKLWGPGLHKIAPQVEEVLVDCSGPWEEERNEETGFVRKRDMLVQNLLKHPAPRSLVFCNSIPTCRKVENALRRADRQEKRWQVLAYHSAVNPQDRQKNLDIF-SSRVERPLIMVCTDRTSRGVDFDTADVQHVVLFDFPRDPSEYVRRVGRTGRAGRVGRVTALVLGRQVGLARSIMEGNSKGARV 448
E D+G L R + F+S K+ +IGAS A +AL S+G+ RPSK+Q I+Y IL G C++A+QTGSGKTLAYL PL+QRLR LE E G RA P PRV++LAPTAELA QV VA+ ++ +P R CC TGG + +TQ ++L++GVDVL+ TPGRV LLE + L + +A++LDEVDV+F+D++F LA IG AP TQF+FVTATLP V+D + EFPG K L GPGLH++AP VEEVL+DCSGP E RNEETG RKRD L+ L + A R+LVFCN+I CR+VEN L RA R +++ L YHSA++P+ N+ F S P++MVCTDR+SRG+DFD A+V+HV+L+DFPRDP EY+RRVGRT RAGR G VT L GRQV L R IM GN +G R+
Sbjct: 191 EVDDGSLGS-RMGPVDREHFYSIKSLPDIGASDLAVSALKSLGVVRPSKIQAISYSAILTGDHCVVADQTGSGKTLAYLAPLVQRLR-LEELAEVHG---RARPGRPRVLILAPTAELAQQVYGVAQRLSGSVPFRSCCFTGGPGRTFKTQAKLLEEGVDVLVATPGRVATLLEAGVLNLEDCRAVILDEVDVLFMDETFQLAPIGTCAPEDTQFIFVTATLPQSVSDMLKEEFPGTKFLLGPGLHRVAPGVEEVLIDCSGPPGEPRNEETGLARKRDALLSQLERRMALRTLVFCNTIQGCRQVENMLSRASRG-GQFETLVYHSAIDPKQAASNMQQFMRSNALSPMVMVCTDRSSRGMDFDRAEVEHVLLYDFPRDPIEYMRRVGRTARAGRKGVVTVLAWGRQVPLVREIMAGNKRGKRL 608
BLAST of EWM25042.1 vs. NCBI_GenBank
Match: gi|848901534|ref|XP_012850870.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 50 [Erythranthe guttata] >gi|848901537|ref|XP_012850871.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 50 [Erythranthe guttata] >gi|604312451|gb|EYU26131.1| hypothetical protein MIMGU_mgv1a003563mg [Erythranthe guttata]) HSP 1 Score: 399.823 bits (1026), Expect = 3.622e-131 Identity = 206/417 (49.40%), Postives = 283/417 (67.87%), Query Frame = 0
Query: 43 ADTFFFSRKTFEEIGASPEARAALGSMGIARPSKVQTIAYPHILQGSSCIIAEQTGSGKTLAYLLPLLQRLRGLEGGGEGKGGLGRAPPKSPRVVVLAPTAELAAQVASVARAMTRH-MPLRVCCVTGGKNPRTQGEMLKQGVDVLIGTPGRVQYLLEENKVLLGEMQALVLDEVDVMFLDDSFDLAV--IGAAAPAHTQFLFVTATLPVPVADQIAREFPGVKKLWGPGLHKIAPQVEEVLVDCSGPWEEERNEETGFVRKRDMLVQNLLKHPAPRSLVFCNSIPTCRKVENALRRADRQEKRWQVLAYHSAVNPQDRQKNLDIFSS--RVERPLIMVCTDRTSRGVDFDTADVQHVVLFDFPRDPSEYVRRVGRTGR-AGRVGRVTALVLGRQVGLARSIMEGNSKGARVHPVPN 453
A + FFSRK+F+E+G + + +L S+ RPS +Q +A+ +L SCIIA+Q+GSGKTLAYLLP++QRLR E GL R PRVV+L PTAELA QV ++ R+++R +P R TGG +TQ E LKQ +DVLI TPGR YL++E + L ++++ +LDEVD+++ D+ F++A+ + AP Q+LFVTATLPV + +++ FP K L GPG+H+ +P++EE+LVDCSG ER+ +T F+ K++ L++ + P +++VFCN I TCRKVENALRR DRQE R +VL +H+A+ Q R N++ F S L +VCTDR SRG+DF A V HVVLFDFPRDPSEYVRRVGRT R AG VG+ +G+QV LA I+E N KG +H VP+
Sbjct: 163 ATSDFFSRKSFKELGCNDDVIESLRSLQYTRPSHIQAMAFTPVLDEKSCIIADQSGSGKTLAYLLPIVQRLRQ-----EETEGLSRPASGHPRVVILVPTAELATQVLNICRSLSRAGVPFRSMVATGGFKQKTQLESLKQEIDVLIATPGRFMYLVKEGFLHLTDLKSAILDEVDILYNDEDFEIALQSLLNTAPVTAQYLFVTATLPVDIYNELVEVFPDCKVLMGPGMHRTSPRLEEILVDCSGDENAERSPDTAFLNKKNALLRLVEGSPVTKTIVFCNKIETCRKVENALRRFDRQETRTKVLPFHAALEQQSRLANMEEFRSFPSTNISLFLVCTDRASRGIDF--AGVDHVVLFDFPRDPSEYVRRVGRTARGAGGVGKAFIFAVGKQVSLASRIIERNLKGHPLHDVPS 572
BLAST of EWM25042.1 vs. NCBI_GenBank
Match: gi|641827698|gb|KDO46874.1| (hypothetical protein CISIN_1g005837mg [Citrus sinensis] >gi|641827699|gb|KDO46875.1| hypothetical protein CISIN_1g005837mg [Citrus sinensis]) HSP 1 Score: 402.519 bits (1033), Expect = 6.604e-131 Identity = 208/424 (49.06%), Postives = 293/424 (69.10%), Query Frame = 0
Query: 36 EERAARLADTFFFSRKTFEEIGASPEARAALGSMGIARPSKVQTIAYPHILQGSSCIIAEQTGSGKTLAYLLPLLQRLRGLEGGGEGKGGLGRAPPKSPRVVVLAPTAELAAQVASVARAMTRH-MPLRVCCVTGGKNPRTQGEMLKQGVDVLIGTPGRVQYLLEENKVLLGEMQALVLDEVDVMFLDDSFDLAV--IGAAAPAHTQFLFVTATLPVPVADQIAREFPGVKKLWGPGLHKIAPQVEEVLVDCSGPWEEERNEETGFVRKRDMLVQNLLKHPAPRSLVFCNSIPTCRKVENALRRADRQEKRWQVLAYHSAVNPQDRQKNLDIFSS--RVERPLIMVCTDRTSRGVDFDTADVQHVVLFDFPRDPSEYVRRVGRTGR-AGRVGRVTALVLGRQVGLARSIMEGNSKGARVHPVPN 453
++R AD FFSRK+F+E+G S +L RPS++Q +A+P +++G SCI+A+Q+GSGKTLAYLLP++QRLR E GL ++ SPRVV+LAPTAELA+QV S R++++ +P R VTGG +TQ E L++GVDVLI TPGR +L++E + L ++ +LDEVD++F D+ F++A+ + +++P Q+LFVTATLPV + +++ FP K + GPG+H+I+P +EE LVDCSG E ++ ET F+ K+ L+Q + K P +++VFCN I TCRKVEN L+R DR+E R +VL +H+A++ + R N+ F++ E L +VCTDR SRG+DF A V HVVLFDFPRDPSEYVRRVGRT R AG G+ V+G+QV LA+ IME N KG +H VP+
Sbjct: 253 KQRHKYSADGDFFSRKSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQRLRQ-----EELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLISSSPVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEEFLVDCSGDQESDKTPETAFLNKKSALLQLIEKSPVSKTIVFCNKIVTCRKVENILKRFDRKETRVRVLPFHAALDQETRLANMKEFTTSRSKEARLFLVCTDRASRGIDF--AGVDHVVLFDFPRDPSEYVRRVGRTARGAGGTGKAFIFVVGKQVSLAQRIMERNRKGHPLHDVPS 669
BLAST of EWM25042.1 vs. NCBI_GenBank
Match: gi|1173819823|ref|XP_020552097.1| (DEAD-box ATP-dependent RNA helicase 50 [Sesamum indicum]) HSP 1 Score: 398.667 bits (1023), Expect = 1.166e-130 Identity = 201/417 (48.20%), Postives = 288/417 (69.06%), Query Frame = 0
Query: 43 ADTFFFSRKTFEEIGASPEARAALGSMGIARPSKVQTIAYPHILQGSSCIIAEQTGSGKTLAYLLPLLQRLRGLEGGGEGKGGLGRAPPKSPRVVVLAPTAELAAQVASVARAMTR-HMPLRVCCVTGGKNPRTQGEMLKQGVDVLIGTPGRVQYLLEENKVLLGEMQALVLDEVDVMFLDDSFDLAV--IGAAAPAHTQFLFVTATLPVPVADQIAREFPGVKKLWGPGLHKIAPQVEEVLVDCSGPWEEERNEETGFVRKRDMLVQNLLKHPAPRSLVFCNSIPTCRKVENALRRADRQEKRWQVLAYHSAVNPQDRQKNLDIFSSRVER--PLIMVCTDRTSRGVDFDTADVQHVVLFDFPRDPSEYVRRVGRTGR-AGRVGRVTALVLGRQVGLARSIMEGNSKGARVHPVPN 453
A++ FFSRK+F+E+G S +L S+ RPS +Q +A+ +L G SC++A+Q+GSGKTLAYL+PL+QRLR E GL ++ +SPRVV+L PTAELA+QV S+ R++++ +P R TGG RTQ E L+QG+DVLI TPGR +LL+E + L +++ +LDEVD+++ D+ F+LA+ + +AP Q+LFVTATLPV + +++ FP + + GPG+H+ +P++EE+L+DCSG E ER +T F+ K++ L+ + + P +++VFCN I TCRKVENAL+R DR E R +VL +H+A+ + R N++ F + + +VCTDR SRG+DF A V HVVLFDFPRDPSEYVRRVGRT R AG G+ +G+QV LAR I+E N KG +H VP+
Sbjct: 163 ANSDFFSRKSFKELGCSDYIIESLRSLQYVRPSHIQAMAFAPVLGGKSCVMADQSGSGKTLAYLVPLVQRLRQ-----EELEGLSKSASQSPRVVILVPTAELASQVLSICRSLSKVGVPFRSMVATGGFRQRTQLENLRQGIDVLIATPGRFMFLLKEGFLQLTNLKSAILDEVDILYNDEDFELALQSLVNSAPVTAQYLFVTATLPVDIYNKVVEVFPDSEVIMGPGMHRTSPRLEEILIDCSGDEETERTPDTAFLNKKNALMHLVEESPVKKTIVFCNKIETCRKVENALKRFDRNEIRIKVLPFHAALEQESRLANIEAFRNFPPNNISMFLVCTDRASRGIDF--AGVDHVVLFDFPRDPSEYVRRVGRTARGAGGKGKAFVFAVGKQVSLARRIIERNQKGHPLHDVPS 572
BLAST of EWM25042.1 vs. NCBI_GenBank
Match: gi|567898902|ref|XP_006441939.1| (hypothetical protein CICLE_v10019165mg [Citrus clementina] >gi|557544201|gb|ESR55179.1| hypothetical protein CICLE_v10019165mg [Citrus clementina]) HSP 1 Score: 400.979 bits (1029), Expect = 2.384e-130 Identity = 207/424 (48.82%), Postives = 292/424 (68.87%), Query Frame = 0
Query: 36 EERAARLADTFFFSRKTFEEIGASPEARAALGSMGIARPSKVQTIAYPHILQGSSCIIAEQTGSGKTLAYLLPLLQRLRGLEGGGEGKGGLGRAPPKSPRVVVLAPTAELAAQVASVARAMTRH-MPLRVCCVTGGKNPRTQGEMLKQGVDVLIGTPGRVQYLLEENKVLLGEMQALVLDEVDVMFLDDSFDLAV--IGAAAPAHTQFLFVTATLPVPVADQIAREFPGVKKLWGPGLHKIAPQVEEVLVDCSGPWEEERNEETGFVRKRDMLVQNLLKHPAPRSLVFCNSIPTCRKVENALRRADRQEKRWQVLAYHSAVNPQDRQKNLDIFSS--RVERPLIMVCTDRTSRGVDFDTADVQHVVLFDFPRDPSEYVRRVGRTGR-AGRVGRVTALVLGRQVGLARSIMEGNSKGARVHPVPN 453
++R AD FFSRK+F+E+G S +L PS++Q +A+P +++G SCI+A+Q+GSGKTLAYLLP++QRLR E GL ++ SPRVV+LAPTAELA+QV S R++++ +P R VTGG +TQ E L++GVDVLI TPGR +L++E + L ++ +LDEVD++F D+ F++A+ + +++P Q+LFVTATLPV + +++ FP K + GPG+H+I+P +EE LVDCSG E ++ ET F+ K+ L+Q + K P +++VFCN I TCRKVEN L+R DR+E R +VL +H+A++ + R N+ F++ E L +VCTDR SRG+DF A V HVVLFDFPRDPSEYVRRVGRT R AG G+ V+G+QV LA+ IME N KG +H VP+
Sbjct: 253 KQRHKYSADGDFFSRKSFKELGCSDYMIESLKRQNFLCPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQRLRQ-----EELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKFGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLISSSPVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEEFLVDCSGDQESDKTPETAFLNKKSALLQLIEKSPVSKTIVFCNKIETCRKVENILKRFDRKETRVRVLPFHAALDQETRLANMKEFTTSRSKEACLFLVCTDRASRGIDF--AGVDHVVLFDFPRDPSEYVRRVGRTARGAGGTGKAFIFVVGKQVSLAQRIMERNRKGHPLHDVPS 669
BLAST of EWM25042.1 vs. NCBI_GenBank
Match: gi|568849591|ref|XP_006478533.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 50 [Citrus sinensis]) HSP 1 Score: 400.979 bits (1029), Expect = 2.587e-130 Identity = 207/424 (48.82%), Postives = 293/424 (69.10%), Query Frame = 0
Query: 36 EERAARLADTFFFSRKTFEEIGASPEARAALGSMGIARPSKVQTIAYPHILQGSSCIIAEQTGSGKTLAYLLPLLQRLRGLEGGGEGKGGLGRAPPKSPRVVVLAPTAELAAQVASVARAMTRH-MPLRVCCVTGGKNPRTQGEMLKQGVDVLIGTPGRVQYLLEENKVLLGEMQALVLDEVDVMFLDDSFDLAV--IGAAAPAHTQFLFVTATLPVPVADQIAREFPGVKKLWGPGLHKIAPQVEEVLVDCSGPWEEERNEETGFVRKRDMLVQNLLKHPAPRSLVFCNSIPTCRKVENALRRADRQEKRWQVLAYHSAVNPQDRQKNLDIFSS--RVERPLIMVCTDRTSRGVDFDTADVQHVVLFDFPRDPSEYVRRVGRTGR-AGRVGRVTALVLGRQVGLARSIMEGNSKGARVHPVPN 453
++R A+ FFSRK+F+E+G S +L RPS++Q +A+P +++G SCI+A+Q+GSGKTLAYLLP++QRLR E GL ++ SPRVV+LAPTAELA+QV S R++++ +P R VTGG +TQ E L++GVDVLI TPGR +L++E + L ++ +LDEVD++F D+ F++A+ + +++P Q+LFVTATLPV + +++ FP K + GPG+H+I+P +EE LVDCSG E ++ ET F+ K+ L+Q + K P +++VFCN I TCRKVEN L+R DR+E R +VL +H+A++ + R N+ F++ E L +VCTDR SRG+DF A V HVVLFDFPRDPSEYVRRVGRT R AG G+ V+G+QV LA+ IME N KG +H VP+
Sbjct: 257 KQRHKYSANGDFFSRKSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQRLRQ-----EELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLISSSPVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEEFLVDCSGDQESDKTPETAFLNKKSALLQLIEKSPVSKTIVFCNKIVTCRKVENILKRFDRKETRVRVLPFHAALDQETRLANMKEFTTSRSKEARLFLVCTDRASRGIDF--AGVDHVVLFDFPRDPSEYVRRVGRTARGAGGTGKAFIFVVGKQVSLAQRIMERNRKGHPLHDVPS 673
BLAST of EWM25042.1 vs. NCBI_GenBank
Match: gi|1130850767|dbj|GAV69112.1| (DEAD domain-containing protein/Helicase_C domain-containing protein [Cephalotus follicularis]) HSP 1 Score: 394.815 bits (1013), Expect = 2.633e-129 Identity = 208/417 (49.88%), Postives = 281/417 (67.39%), Query Frame = 0
Query: 43 ADTFFFSRKTFEEIGASPEARAALGSMGIARPSKVQTIAYPHILQGSSCIIAEQTGSGKTLAYLLPLLQRLRGLEGGGEGKGGLGRAPPKSPRVVVLAPTAELAAQVASVARAMTRH-MPLRVCCVTGGKNPRTQGEMLKQGVDVLIGTPGRVQYLLEENKVLLGEMQALVLDEVDVMFLDDSFD--LAVIGAAAPAHTQFLFVTATLPVPVADQIAREFPGVKKLWGPGLHKIAPQVEEVLVDCSGPWEEERNEETGFVRKRDMLVQNLLKHPAPRSLVFCNSIPTCRKVENALRRADRQEKRWQVLAYHSAVNPQDRQKNLDIFSSR--VERPLIMVCTDRTSRGVDFDTADVQHVVLFDFPRDPSEYVRRVGRTGR-AGRVGRVTALVLGRQVGLARSIMEGNSKGARVHPVPN 453
D FFSRK+F ++G + +L RP+ +Q +A+P +++G SCIIA+Q+GSGKTLAYLLP++QRLR E GL + +SPRVV+L PTAELA+QV S R+M++ +P R VTGG RTQ E L+ GVDVLI TPGR+ YLL+E + L ++ VLDE+D+++ D+ F+ L + ++P Q+LFVTATLPV + +++ FP K + GPG+H+I+P +EEVLVDCSG + +T F+ K+ L+Q + K P P++L+FCN I TCRKVEN L+R DR+ R QV +H+AV + R +N+ F+ E L +VCTDRTSRG+DF A V HVVLFDFPRDPSEYVRRVGRT R AG G+ V+G+QV LAR IME N KG +H VP+
Sbjct: 154 TDAHFFSRKSFADLGCTQFMVDSLKHQLFLRPANIQAMAFPPVIEGKSCIIADQSGSGKTLAYLLPVIQRLR-----QEELQGLSISSSQSPRVVILLPTAELASQVFSNCRSMSKTGVPFRSMVVTGGFRQRTQLENLQLGVDVLIATPGRLMYLLKEGFLKLTNLRCAVLDEIDILYKDEDFEASLQSLINSSPVTAQYLFVTATLPVDIYNKLVEVFPDCKVIMGPGMHRISPGLEEVLVDCSGDV-TVKTPDTAFINKKSALLQLVEKTPVPKTLIFCNKIETCRKVENVLKRFDRKGTRLQVFPFHAAVAQETRLENMKEFTKSRPEEESLFLVCTDRTSRGIDF--AGVDHVVLFDFPRDPSEYVRRVGRTARGAGGKGKAFIFVVGKQVSLARKIMERNQKGHPLHDVPS 562
BLAST of EWM25042.1 vs. NCBI_GenBank
Match: gi|1150087100|ref|XP_020229176.1| (DEAD-box ATP-dependent RNA helicase 50 [Cajanus cajan] >gi|1012342375|gb|KYP53569.1| DEAD-box ATP-dependent RNA helicase 50 [Cajanus cajan]) HSP 1 Score: 392.889 bits (1008), Expect = 2.772e-129 Identity = 200/417 (47.96%), Postives = 286/417 (68.59%), Query Frame = 0
Query: 43 ADTFFFSRKTFEEIGASPEARAALGSMGIARPSKVQTIAYPHILQGSSCIIAEQTGSGKTLAYLLPLLQRLRGLEGGGEGKGGLGRAPPKSPRVVVLAPTAELAAQVASVARAMTRH-MPLRVCCVTGGKNPRTQGEMLKQGVDVLIGTPGRVQYLLEENKVLLGEMQALVLDEVDVMFLDDSFDLAV--IGAAAPAHTQFLFVTATLPVPVADQIAREFPGVKKLWGPGLHKIAPQVEEVLVDCSGPWEEERNEETGFVRKRDMLVQNLLKHPAPRSLVFCNSIPTCRKVENALRRADRQEKRWQVLAYHSAVNPQDRQKNLDIFSSRVERPL--IMVCTDRTSRGVDFDTADVQHVVLFDFPRDPSEYVRRVGRTGRAGR-VGRVTALVLGRQVGLARSIMEGNSKGARVHPVPN 453
DT FFS K+F++IG + +L + RPS VQ +A+ + +G +C+IA+Q+GSGKTLAYL P++QRLR E G K ++PRV+VLAPTAELA+QV R++++ +P + VTGG RTQ E L+QGVDVLI TPGR +L+ E + L ++ VLDEVD++F D+ F++A+ + ++P TQ+LFVTATLP + ++ FP + + GPG+H+I+ ++EE++VDCSG +E+ +T F+ K+D L+Q + ++P PR++VFCN I TCRKVEN+LRR DR+ R QVL +H+A+ + R +++ F+S + + IM+CTDR SRG+DF A V HV+LFDFPRDPSEYVRRVGRT R + VG+ V+G+QV LAR IME N KG +H VP+
Sbjct: 103 TDTNFFSLKSFKQIGCTDYIIQSLQKLSFTRPSHVQAMAFAPVFRGKTCVIADQSGSGKTLAYLAPIIQRLRQEELDGRSKSS-----SQAPRVLVLAPTAELASQVLDNCRSLSKSGVPFKSMVVTGGFRQRTQLENLQQGVDVLIATPGRFLFLINEGFLQLTNLRCAVLDEVDILFGDEDFEVALQCLINSSPVDTQYLFVTATLPKNIYSKLVEVFPDCEMIMGPGMHRISSRLEEIVVDCSGEDGQEKTPDTAFLNKKDALLQLVEENPVPRTIVFCNKIETCRKVENSLRRFDRKGNRVQVLPFHAAMTQESRLASMEEFTSPPSKGVSQIMICTDRASRGIDF--AGVDHVMLFDFPRDPSEYVRRVGRTARGAKGVGKAFIFVVGKQVSLARKIMERNRKGHPLHDVPS 512 The following BLAST results are available for this feature:
BLAST of EWM25042.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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