EWM25040.1, cds5645 (CDS) Nannochloropsis gaditana

Overview
NameEWM25040.1
Unique Namecds5645
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:516086..516772 -

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Properties
Property NameValue
Protein idEWM25040.1
ProductProtein of unknown function DUF2905
Orig transcript idgnl|cribi|Naga_100049g8.2099.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:516086..516772 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR021320DUF2905
Homology
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BLAST of EWM25040.1 vs. NCBI_GenBank
Match: gi|585106676|gb|EWM25040.1| (Protein of unknown function DUF2905 [Nannochloropsis gaditana])

HSP 1 Score: 459.914 bits (1182), Expect = 1.177e-163
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0 
Query:    1 MRRRQVHGDGVTTDNASSTPASAPTTYEGTWPAPASETSPPAATAAVNEEEALRAKALGVDALRRGDYDRAARFLGISSRLLPENADIRGLLNSALAGQARTDTRRASAHRAAAATAPPWSPQHVSGRFMNGLDAVLDKVWASLPSAGQNLITRYTHPSMRKPLAYVSILIITAATYRFVLRGPPLVLGHLPGDIYYNSGNVVVSAPLFSCFLASMAFSQVARLFQRR 228
            MRRRQVHGDGVTTDNASSTPASAPTTYEGTWPAPASETSPPAATAAVNEEEALRAKALGVDALRRGDYDRAARFLGISSRLLPENADIRGLLNSALAGQARTDTRRASAHRAAAATAPPWSPQHVSGRFMNGLDAVLDKVWASLPSAGQNLITRYTHPSMRKPLAYVSILIITAATYRFVLRGPPLVLGHLPGDIYYNSGNVVVSAPLFSCFLASMAFSQVARLFQRR
Sbjct:    1 MRRRQVHGDGVTTDNASSTPASAPTTYEGTWPAPASETSPPAATAAVNEEEALRAKALGVDALRRGDYDRAARFLGISSRLLPENADIRGLLNSALAGQARTDTRRASAHRAAAATAPPWSPQHVSGRFMNGLDAVLDKVWASLPSAGQNLITRYTHPSMRKPLAYVSILIITAATYRFVLRGPPLVLGHLPGDIYYNSGNVVVSAPLFSCFLASMAFSQVARLFQRR 228
The following BLAST results are available for this feature:
BLAST of EWM25040.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106676|gb|EWM25040.1|1.177e-163100.00Protein of unknown function DUF2905 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5660rna5660Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications