EWM25026.1, cds5643 (CDS) Nannochloropsis gaditana

Overview
NameEWM25026.1
Unique Namecds5643
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:508642..508735 +
Alignment locationCM002466.1:508994..509190 +
Alignment locationCM002466.1:509324..509393 +
Alignment locationCM002466.1:509491..509587 +
Alignment locationCM002466.1:509799..509811 +

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Properties
Property NameValue
Protein idEWM25026.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100049g10.2085.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:508642..508735 +
CM002466.1supercontigCM002466.1:508994..509190 +
CM002466.1supercontigCM002466.1:509324..509393 +
CM002466.1supercontigCM002466.1:509491..509587 +
CM002466.1supercontigCM002466.1:509799..509811 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM25026.1 vs. NCBI_GenBank
Match: gi|585106662|gb|EWM25026.1| (hypothetical protein Naga_100049g10 [Nannochloropsis gaditana])

HSP 1 Score: 316.62 bits (810), Expect = 2.652e-109
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0 
Query:    1 MPEQSASAGGRASRAPPQVVVKAALDHVARRGREGCTVKEIWDECEVGCDSALKAFLWRALRRQRKYVFCRKTAVARPGSQRGAIKGEKNCKAENWAHAPLNAEELDSLSLDAWDSVMVIASEDHRLRALGALHASDLPEETHGTEILEILAAAGS 156
            MPEQSASAGGRASRAPPQVVVKAALDHVARRGREGCTVKEIWDECEVGCDSALKAFLWRALRRQRKYVFCRKTAVARPGSQRGAIKGEKNCKAENWAHAPLNAEELDSLSLDAWDSVMVIASEDHRLRALGALHASDLPEETHGTEILEILAAAGS
Sbjct:    1 MPEQSASAGGRASRAPPQVVVKAALDHVARRGREGCTVKEIWDECEVGCDSALKAFLWRALRRQRKYVFCRKTAVARPGSQRGAIKGEKNCKAENWAHAPLNAEELDSLSLDAWDSVMVIASEDHRLRALGALHASDLPEETHGTEILEILAAAGS 156
The following BLAST results are available for this feature:
BLAST of EWM25026.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106662|gb|EWM25026.1|2.652e-109100.00hypothetical protein Naga_100049g10 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5658rna5658Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications