EWM25037.1, cds5641 (CDS) Nannochloropsis gaditana

Overview
NameEWM25037.1
Unique Namecds5641
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:505642..505801 +
Alignment locationCM002466.1:505995..506376 +
Alignment locationCM002466.1:506613..507225 +

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Properties
Property NameValue
Protein idEWM25037.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100049g11.2096.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:505642..505801 +
CM002466.1supercontigCM002466.1:505995..506376 +
CM002466.1supercontigCM002466.1:506613..507225 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM25037.1 vs. NCBI_GenBank
Match: gi|585106673|gb|EWM25037.1| (hypothetical protein Naga_100049g11 [Nannochloropsis gaditana])

HSP 1 Score: 789.645 bits (2038), Expect = 0.000e+0
Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 0 
Query:    1 MMRRILFSVVGRSVLLLGCFQIPCTAWAYINPGGCLGSWSPSSSLSSMTGSLRAGSGRAFSAGLRMAMSNDGGLPLGEEPEGTRVEEALRVTTRQIKALQRLVDSFQDVPPADQPPVFPPAEVRLPVATRESVEGDKAQVLELNAKYYDDLNGRDVKSILSLWKEDGAVQMYANEDRVIRGLEEIDKHMDSRFKQPWATNKHKERMDVTKEDERVFLRGINALVTNKEMWVNPISKDKLIMFSTKIWQKSNGEWRLVHVHSGDGSQVEVHPNGQMKRGWRAGREGGREGGSGLEKEAKREGKAMLGVSFNLTSNHARAPCWLHGRASITRESHFSGHVPLPLPQCPKAAGAWASSNSFPLPARVLQGDGWRRGSRNWGVSWGAF 384
            MMRRILFSVVGRSVLLLGCFQIPCTAWAYINPGGCLGSWSPSSSLSSMTGSLRAGSGRAFSAGLRMAMSNDGGLPLGEEPEGTRVEEALRVTTRQIKALQRLVDSFQDVPPADQPPVFPPAEVRLPVATRESVEGDKAQVLELNAKYYDDLNGRDVKSILSLWKEDGAVQMYANEDRVIRGLEEIDKHMDSRFKQPWATNKHKERMDVTKEDERVFLRGINALVTNKEMWVNPISKDKLIMFSTKIWQKSNGEWRLVHVHSGDGSQVEVHPNGQMKRGWRAGREGGREGGSGLEKEAKREGKAMLGVSFNLTSNHARAPCWLHGRASITRESHFSGHVPLPLPQCPKAAGAWASSNSFPLPARVLQGDGWRRGSRNWGVSWGAF
Sbjct:    1 MMRRILFSVVGRSVLLLGCFQIPCTAWAYINPGGCLGSWSPSSSLSSMTGSLRAGSGRAFSAGLRMAMSNDGGLPLGEEPEGTRVEEALRVTTRQIKALQRLVDSFQDVPPADQPPVFPPAEVRLPVATRESVEGDKAQVLELNAKYYDDLNGRDVKSILSLWKEDGAVQMYANEDRVIRGLEEIDKHMDSRFKQPWATNKHKERMDVTKEDERVFLRGINALVTNKEMWVNPISKDKLIMFSTKIWQKSNGEWRLVHVHSGDGSQVEVHPNGQMKRGWRAGREGGREGGSGLEKEAKREGKAMLGVSFNLTSNHARAPCWLHGRASITRESHFSGHVPLPLPQCPKAAGAWASSNSFPLPARVLQGDGWRRGSRNWGVSWGAF 384
[Close]
BLAST of EWM25037.1 vs. NCBI_GenBank
Match: gi|585106672|gb|EWM25036.1| (hypothetical protein Naga_100049g11 [Nannochloropsis gaditana])

HSP 1 Score: 578.941 bits (1491), Expect = 0.000e+0
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0 
Query:    1 MMRRILFSVVGRSVLLLGCFQIPCTAWAYINPGGCLGSWSPSSSLSSMTGSLRAGSGRAFSAGLRMAMSNDGGLPLGEEPEGTRVEEALRVTTRQIKALQRLVDSFQDVPPADQPPVFPPAEVRLPVATRESVEGDKAQVLELNAKYYDDLNGRDVKSILSLWKEDGAVQMYANEDRVIRGLEEIDKHMDSRFKQPWATNKHKERMDVTKEDERVFLRGINALVTNKEMWVNPISKDKLIMFSTKIWQKSNGEWRLVHVHSGDGSQVEVHPNGQMK 276
            MMRRILFSVVGRSVLLLGCFQIPCTAWAYINPGGCLGSWSPSSSLSSMTGSLRAGSGRAFSAGLRMAMSNDGGLPLGEEPEGTRVEEALRVTTRQIKALQRLVDSFQDVPPADQPPVFPPAEVRLPVATRESVEGDKAQVLELNAKYYDDLNGRDVKSILSLWKEDGAVQMYANEDRVIRGLEEIDKHMDSRFKQPWATNKHKERMDVTKEDERVFLRGINALVTNKEMWVNPISKDKLIMFSTKIWQKSNGEWRLVHVHSGDGSQVEVHPNGQMK
Sbjct:    1 MMRRILFSVVGRSVLLLGCFQIPCTAWAYINPGGCLGSWSPSSSLSSMTGSLRAGSGRAFSAGLRMAMSNDGGLPLGEEPEGTRVEEALRVTTRQIKALQRLVDSFQDVPPADQPPVFPPAEVRLPVATRESVEGDKAQVLELNAKYYDDLNGRDVKSILSLWKEDGAVQMYANEDRVIRGLEEIDKHMDSRFKQPWATNKHKERMDVTKEDERVFLRGINALVTNKEMWVNPISKDKLIMFSTKIWQKSNGEWRLVHVHSGDGSQVEVHPNGQMK 276
The following BLAST results are available for this feature:
BLAST of EWM25037.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585106673|gb|EWM25037.1|0.000e+0100.00hypothetical protein Naga_100049g11 [Nannochlorops... [more]
gi|585106672|gb|EWM25036.1|0.000e+0100.00hypothetical protein Naga_100049g11 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5656rna5656Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications