EWM25044.1, cds5614 (CDS) Nannochloropsis gaditana

Overview
NameEWM25044.1
Unique Namecds5614
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:441392..442214 -

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Properties
Property NameValue
Start range441392
Start range.
Protein idEWM25044.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100049g39.2103.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:441392..442214 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM25044.1 vs. NCBI_GenBank
Match: gi|585106679|gb|EWM25043.1| (hypothetical protein Naga_100049g39, partial [Nannochloropsis gaditana] >gi|585106680|gb|EWM25044.1| hypothetical protein Naga_100049g39, partial [Nannochloropsis gaditana])

HSP 1 Score: 536.184 bits (1380), Expect = 0.000e+0
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0 
Query:    1 MAAFGFVSRRVHASVQEEREEARDAEPAAGIEEAHGPRQYGTLADRSLEESGERPDGDRHPLIPRGVDSGDPLEAPADPSSSLPYASPPPLFPPLCPRLPRGGVRLAMSPLRPRLRRRPFHPPHGLHGLPKPLAGPAVSQWRLHVRGPPGKAGHELSSHRPNLHVRGSNHLPCCLALVLRLQWVRAPPGPSPVRRSAGGGGQHHVQLHVLFHVHIHFFSTGGVRRKRRGPGRRGGSEATGATQRTSGSHCRPSWCRRARFWAQACPWLACSCGR 274
            MAAFGFVSRRVHASVQEEREEARDAEPAAGIEEAHGPRQYGTLADRSLEESGERPDGDRHPLIPRGVDSGDPLEAPADPSSSLPYASPPPLFPPLCPRLPRGGVRLAMSPLRPRLRRRPFHPPHGLHGLPKPLAGPAVSQWRLHVRGPPGKAGHELSSHRPNLHVRGSNHLPCCLALVLRLQWVRAPPGPSPVRRSAGGGGQHHVQLHVLFHVHIHFFSTGGVRRKRRGPGRRGGSEATGATQRTSGSHCRPSWCRRARFWAQACPWLACSCGR
Sbjct:    1 MAAFGFVSRRVHASVQEEREEARDAEPAAGIEEAHGPRQYGTLADRSLEESGERPDGDRHPLIPRGVDSGDPLEAPADPSSSLPYASPPPLFPPLCPRLPRGGVRLAMSPLRPRLRRRPFHPPHGLHGLPKPLAGPAVSQWRLHVRGPPGKAGHELSSHRPNLHVRGSNHLPCCLALVLRLQWVRAPPGPSPVRRSAGGGGQHHVQLHVLFHVHIHFFSTGGVRRKRRGPGRRGGSEATGATQRTSGSHCRPSWCRRARFWAQACPWLACSCGR 274
The following BLAST results are available for this feature:
BLAST of EWM25044.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106679|gb|EWM25043.1|0.000e+0100.00hypothetical protein Naga_100049g39, partial [Nann... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5628rna5628Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications