EWM30110.1, cds561 (CDS) Nannochloropsis gaditana

Overview
NameEWM30110.1
Unique Namecds561
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1387793..1388268 -

Link to JBrowse

Properties
Property NameValue
Start range1387793
Start range.
Protein idEWM30110.1
Productfad synthetase
Partialtrue
Orig transcript idgnl|cribi|Naga_100310g1.1345.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1387793..1388268 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR014729Rossmann-like_a/b/a_fold
IPR002500PAPS_reduct
Homology
[Close]
BLAST of EWM30110.1 vs. NCBI_GenBank
Match: gi|585112755|gb|EWM30110.1| (fad synthetase, partial [Nannochloropsis gaditana])

HSP 1 Score: 330.487 bits (846), Expect = 9.015e-115
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0 
Query:    1 MDSLQAFVSQPLKGSAANPHNEALQGQIQRALDLICTVLTLFPLEMLALTFNGGKDACVVFHLVRLALRLRGVAEGEASGRLKVLYFSPEHGDFPEVISFMAKISEDYHVTYTTYPAGTSFKDGMRDLVEKQGLKAVFLGVRRGDPHSCAWKRGGETEG 159
            MDSLQAFVSQPLKGSAANPHNEALQGQIQRALDLICTVLTLFPLEMLALTFNGGKDACVVFHLVRLALRLRGVAEGEASGRLKVLYFSPEHGDFPEVISFMAKISEDYHVTYTTYPAGTSFKDGMRDLVEKQGLKAVFLGVRRGDPHSCAWKRGGETEG
Sbjct:    1 MDSLQAFVSQPLKGSAANPHNEALQGQIQRALDLICTVLTLFPLEMLALTFNGGKDACVVFHLVRLALRLRGVAEGEASGRLKVLYFSPEHGDFPEVISFMAKISEDYHVTYTTYPAGTSFKDGMRDLVEKQGLKAVFLGVRRGDPHSCAWKRGGETEG 159
[Close]
BLAST of EWM30110.1 vs. NCBI_GenBank
Match: gi|298708389|emb|CBJ48452.1| (FAD synthetase [Ectocarpus siliculosus])

HSP 1 Score: 84.7297 bits (208), Expect = 2.297e-16
Identity = 54/126 (42.86%), Postives = 76/126 (60.32%), Query Frame = 0 
Query:   27 QIQRALDLICTVLTLFPLEM---LALTFNGGKDACVVFHLVRLALRLRGVA---EGEASGRLKVLYFSPEHGDFPEVISFMAKISEDYHVTYTTYPAGTSFKDGMRDLVEKQGLKAVFLGVRRGDP 146
            ++ ++LD++   L  F  E    LA++FNGGKDACVV +L+   L  R         AS  + V+YF  E  +FPE+ +FM ++SE Y   +  Y    S+KDGM+DLVE  G+KAV +G RRGDP
Sbjct:   50 KLAQSLDVVRRALDDFGGETGRGLAISFNGGKDACVVLYLLLFVLAERDELWRLTSSASKHIPVVYFEKE--EFPEIDAFMQQVSETYQFEFQRY--SKSYKDGMQDLVESHGIKAVIMGQRRGDP 171
[Close]
BLAST of EWM30110.1 vs. NCBI_GenBank
Match: gi|1102692806|gb|OIV92369.1| (hypothetical protein TanjilG_09967 [Lupinus angustifolius])

HSP 1 Score: 80.4925 bits (197), Expect = 1.068e-14
Identity = 49/137 (35.77%), Postives = 74/137 (54.01%), Query Frame = 0 
Query:   21 NEALQGQIQRALDLICTVLTLFPLEMLALTFNGGKDACVVFHLVRLALRLRGVAEGEASGRLK-----VLYF-SPEHGDFPEVISFMAKISEDYHVTYTTYPAGTSFKDGMRDLVEKQGLKAVFLGVRRGDPHSCAW 151
            ++ LQ +   A  +I   L L+P+E +A +FNGGKD+ V+ HL+R    L    +  A+G LK      +YF SP    FPE+ SF    +  Y +   T      FK G+  L+++  ++A+FLGVR GDP +  W
Sbjct:   12 DQRLQTKYNNATYVIQRALALYPIEEVAFSFNGGKDSTVLLHLLRAGYFLHKRGQSNANGDLKDFPIRTIYFESP--CTFPEINSFTYDTAAAYDLQIDT--IRLDFKSGLEALLKENPIRAIFLGVRIGDPTAILW 144

HSP 2 Score: 77.0258 bits (188), Expect = 1.669e-13
Identity = 48/132 (36.36%), Postives = 72/132 (54.55%), Query Frame = 0 
Query:   21 NEALQGQIQRALDLICTVLTLFPLEMLALTFNGGKDACVVFHLVRLALRLRGVAEGEASGRLK-----VLYF-SPEHGDFPEVISFMAKISEDYHVTYTTYPAGTSFKDGMRDLVEKQGLKAVFLGVRRGDP 146
            ++ LQ +   A  +I   L L+P+E +A +FNGGKD+ V+ HL+R    L    +  A+G LK      +YF SP    FPE+ SF    +  Y +   T      FK G+  L+++  ++A+FLGVR GDP
Sbjct:  158 DQRLQTKYNNATYVIQRALALYPIEEVAFSFNGGKDSTVLLHLLRAGYFLHKRGQSNANGDLKDFPIRTIYFESP--CTFPEINSFTYDTAAAYDLQIDT--IRLDFKSGLEALLKENPIRAIFLGVRIGDP 285
[Close]
BLAST of EWM30110.1 vs. NCBI_GenBank
Match: gi|145240503|ref|XP_001392898.1| (FAD synthetase [Aspergillus niger CBS 513.88] >gi|134077420|emb|CAK45674.1| unnamed protein product [Aspergillus niger])

HSP 1 Score: 78.1814 bits (191), Expect = 2.835e-14
Identity = 46/130 (35.38%), Postives = 67/130 (51.54%), Query Frame = 0 
Query:   22 EALQGQIQRALDLICTVLTLFPLEMLALTFNGGKDACVVFHLVRLALRLRGVAEGEASGRLKVLYFSPEHGDFPEVISFMAKISEDYHVT---YTTYPAGTSFKDGMRD-LVEKQGLKAVFLGVRRGDPH 147
             A+Q Q + +LD+I T L  +PL  L+L++NGGKD  V+  L   +L      E      +  +Y  P    FP+V  F+   +  YH+    YTT P  ++ K    D L    G+KA+F+G RR DPH
Sbjct:   74 HAVQNQTRTSLDVIATALHRYPLSELSLSYNGGKDCLVLLVLFLASLHPHPAPEDGGLSSIPAIYALPP-DPFPDVEEFVQWSARAYHLNVLKYTTDPPRSTIKSTFEDYLFLNPGVKAIFVGTRRTDPH 202
[Close]
BLAST of EWM30110.1 vs. NCBI_GenBank
Match: gi|350629919|gb|EHA18292.1| (hypothetical protein ASPNIDRAFT_136692 [Aspergillus niger ATCC 1015])

HSP 1 Score: 77.411 bits (189), Expect = 3.320e-14
Identity = 46/130 (35.38%), Postives = 67/130 (51.54%), Query Frame = 0 
Query:   22 EALQGQIQRALDLICTVLTLFPLEMLALTFNGGKDACVVFHLVRLALRLRGVAEGEASGRLKVLYFSPEHGDFPEVISFMAKISEDYHVT---YTTYPAGTSFKDGMRD-LVEKQGLKAVFLGVRRGDPH 147
             A+Q Q + +LD+I T L  +PL  L+L++NGGKD  V+  L   +L      E      +  +Y  P    FP+V  F+   +  YH+    YTT P  ++ K    D L    G+KA+F+G RR DPH
Sbjct:   28 HAVQNQTRTSLDVIATALHRYPLSELSLSYNGGKDCLVLLVLFLASLHPHPAPEDGGLSSIPAIYALPP-DPFPDVEEFVQWSARAYHLNVLKYTTDPPRSTIKSTFEDYLFLNPGVKAIFVGTRRTDPH 156
[Close]
BLAST of EWM30110.1 vs. NCBI_GenBank
Match: gi|330797371|ref|XP_003286734.1| (hypothetical protein DICPUDRAFT_31417 [Dictyostelium purpureum] >gi|325083252|gb|EGC36709.1| hypothetical protein DICPUDRAFT_31417 [Dictyostelium purpureum])

HSP 1 Score: 76.6406 bits (187), Expect = 9.302e-14
Identity = 43/157 (27.39%), Postives = 76/157 (48.41%), Query Frame = 0 
Query:   12 LKGSAANPHNEALQGQIQRALDLICTVLTLFPLEMLALTFNGGKDACVVFHLVRLALR----------LRGVAEGEASGRLKVLYFSPEHGDFPEVISFMAKISEDYHVTYTTYPAGTSFKDGMRDLVEKQGLKAVFLGVRRGDPHSCAWKRGGETE 158
            +K   +N   E    +I+ +++ I      F  + ++L+FNGGKD CV+ HL+   L+                      LK +YF   +  F +V  F  K S  Y++      +G   K+G+ ++++ Q +KAVF+G+R GDP+S   ++   T+
Sbjct:   26 VKIKNSNIDKEDFYNKIKDSIETIMIAFNKFTFQEISLSFNGGKDCCVLLHLINYVLQKTFNNNNINCHNNSNGNNYKDGLKTIYFQTPNS-FEQVNDFTEKCSSIYNLNILYVSSG--IKEGLENIIDSQNIKAVFIGIRYGDPNSSHLEKFSVTD 179
[Close]
BLAST of EWM30110.1 vs. NCBI_GenBank
Match: gi|1111929033|gb|OJJ88264.1| (hypothetical protein ASPGLDRAFT_41802 [Aspergillus glaucus CBS 516.65])

HSP 1 Score: 76.6406 bits (187), Expect = 1.064e-13
Identity = 44/129 (34.11%), Postives = 67/129 (51.94%), Query Frame = 0 
Query:   23 ALQGQIQRALDLICTVLTLFPLEMLALTFNGGKDACVVFHLVRLALRLRGVAEGEASGRLKVLYFSPEHGDFPEVISFMAKISEDYH---VTYTTYPAGTSFKDGMRD-LVEKQGLKAVFLGVRRGDPH 147
            A+Q Q + +LD+  T L+ +PL  L+L++NGGKD  V+  L   +L      E      +  +Y  P    FP+V  F+   + +YH   + YTT P  T+ +    D L     +KA+F+G RR DPH
Sbjct:   81 AVQHQTRTSLDVFATALSQYPLAQLSLSYNGGKDCLVLLVLFLASLHPHPPPEEGGLVSIPAIYALPP-DPFPDVEGFVKSSAREYHLSIIKYTTDPPRTTLRSSFEDYLALNPAVKAIFVGTRRTDPH 208
[Close]
BLAST of EWM30110.1 vs. NCBI_GenBank
Match: gi|1117465795|ref|XP_019425502.1| (PREDICTED: FAD synthase-like isoform X1 [Lupinus angustifolius] >gi|1117465797|ref|XP_019425503.1| PREDICTED: FAD synthase-like isoform X1 [Lupinus angustifolius] >gi|1117465799|ref|XP_019425504.1| PREDICTED: FAD synthase-like isoform X2 [Lupinus angustifolius] >gi|1117465801|ref|XP_019425505.1| PREDICTED: FAD synthase-like isoform X2 [Lupinus angustifolius] >gi|1117465803|ref|XP_019425506.1| PREDICTED: FAD synthase-like isoform X1 [Lupinus angustifolius] >gi|1117465805|ref|XP_019425508.1| PREDICTED: FAD synthase-like isoform X1 [Lupinus angustifolius] >gi|1117465807|ref|XP_019425509.1| PREDICTED: FAD synthase-like isoform X1 [Lupinus angustifolius])

HSP 1 Score: 77.0258 bits (188), Expect = 1.598e-13
Identity = 48/132 (36.36%), Postives = 72/132 (54.55%), Query Frame = 0 
Query:   21 NEALQGQIQRALDLICTVLTLFPLEMLALTFNGGKDACVVFHLVRLALRLRGVAEGEASGRLK-----VLYF-SPEHGDFPEVISFMAKISEDYHVTYTTYPAGTSFKDGMRDLVEKQGLKAVFLGVRRGDP 146
            ++ LQ +   A  +I   L L+P+E +A +FNGGKD+ V+ HL+R    L    +  A+G LK      +YF SP    FPE+ SF    +  Y +   T      FK G+  L+++  ++A+FLGVR GDP
Sbjct:   12 DQRLQTKYNNATYVIQRALALYPIEEVAFSFNGGKDSTVLLHLLRAGYFLHKRGQSNANGDLKDFPIRTIYFESP--CTFPEINSFTYDTAAAYDLQIDT--IRLDFKSGLEALLKENPIRAIFLGVRIGDP 139
[Close]
BLAST of EWM30110.1 vs. NCBI_GenBank
Match: gi|217073800|gb|ACJ85260.1| (unknown [Medicago truncatula])

HSP 1 Score: 75.485 bits (184), Expect = 2.263e-13
Identity = 45/131 (34.35%), Postives = 70/131 (53.44%), Query Frame = 0 
Query:   21 NEALQGQIQRALDLICTVLTLFPLEMLALTFNGGKDACVVFHLVRLALRLRGVAEGEASGRLK-----VLYFSPEHGDFPEVISFMAKISEDYHVTYTTYPAGTSFKDGMRDLVEKQGLKAVFLGVRRGDP 146
            +  LQ +   A  +I   L+L+ +E +A +FNGGKD+ V+ HL+R    L    +  A+G +K      +YF      FPE+ SF   I+  Y +   T      FK G+  L++ + ++A+FLGVR GDP
Sbjct:   12 DRRLQTKYNNATYVIQRALSLYSIEEVAFSFNGGKDSTVLLHLLRAGYFLHKTGQNSANGDVKDFPIRTIYFESPCA-FPEINSFTYDIAATYGLQIDT--IRLDFKSGLETLLKDKPIRAIFLGVRIGDP 139
[Close]
BLAST of EWM30110.1 vs. NCBI_GenBank
Match: gi|1213319399|gb|OWW28634.1| (Phosphoadenosine phosphosulfate reductase family protein [Aspergillus niger])

HSP 1 Score: 76.2554 bits (186), Expect = 2.415e-13
Identity = 46/129 (35.66%), Postives = 67/129 (51.94%), Query Frame = 0 
Query:   23 ALQGQIQRALDLICTVLTLFPLEMLALTFNGGKDACVVFHLVRLALRLRGVAEGEASGRLKVLYFSPEHGDFPEVISFMAKISEDYHVT---YTTYPAGTSFKDGMRD-LVEKQGLKAVFLGVRRGDPH 147
            A+Q Q + +LD+I T L  +PL  L+L++NGGKD  V+  L   +L      E      +  +Y  P    FP+V  F+   +  YH+    YTT P  ++ K    D L    G+KA+F+G RR DPH
Sbjct:  202 AVQNQTRTSLDVIATALHRYPLSELSLSYNGGKDCLVLLVLFLASLHPHPAPEDGGLSSIPAIYALPP-DPFPDVEEFVQWSARAYHLNVLKYTTDPPRSTIKSTFEDYLFLNPGVKAIFVGTRRTDPH 329
The following BLAST results are available for this feature:
BLAST of EWM30110.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112755|gb|EWM30110.1|9.015e-115100.00fad synthetase, partial [Nannochloropsis gaditana][more]
gi|298708389|emb|CBJ48452.1|2.297e-1642.86FAD synthetase [Ectocarpus siliculosus][more]
gi|1102692806|gb|OIV92369.1|1.068e-1435.77hypothetical protein TanjilG_09967 [Lupinus angust... [more]
gi|145240503|ref|XP_001392898.1|2.835e-1435.38FAD synthetase [Aspergillus niger CBS 513.88] >gi|... [more]
gi|350629919|gb|EHA18292.1|3.320e-1435.38hypothetical protein ASPNIDRAFT_136692 [Aspergillu... [more]
gi|330797371|ref|XP_003286734.1|9.302e-1427.39hypothetical protein DICPUDRAFT_31417 [Dictyosteli... [more]
gi|1111929033|gb|OJJ88264.1|1.064e-1334.11hypothetical protein ASPGLDRAFT_41802 [Aspergillus... [more]
gi|1117465795|ref|XP_019425502.1|1.598e-1336.36PREDICTED: FAD synthase-like isoform X1 [Lupinus a... [more]
gi|217073800|gb|ACJ85260.1|2.263e-1334.35unknown [Medicago truncatula][more]
gi|1213319399|gb|OWW28634.1|2.415e-1335.66Phosphoadenosine phosphosulfate reductase family p... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna561rna561Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications