EWM30113.1, cds560 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30113.1 vs. NCBI_GenBank
Match: gi|585112759|gb|EWM30113.1| (fad synthase [Nannochloropsis gaditana]) HSP 1 Score: 394.045 bits (1011), Expect = 7.897e-139 Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0
Query: 1 MLDRSIVESEHLEPSSPGWPVFLRVNPLLTWDYGQIWDFLRRFSLPYCRLYDEGYTSLGDTRTTVRNPALRRLEGGYRPAYALENWTLERANRRVADRKEDAMEEEKGRDADGQVDDVRVKRREAGWEGALSSPSLVMREEEPTGRGRKDEVGKTLEEEEELLQRHEDTRNKHPYPTGQHTHQSQGTLRARSF 193
MLDRSIVESEHLEPSSPGWPVFLRVNPLLTWDYGQIWDFLRRFSLPYCRLYDEGYTSLGDTRTTVRNPALRRLEGGYRPAYALENWTLERANRRVADRKEDAMEEEKGRDADGQVDDVRVKRREAGWEGALSSPSLVMREEEPTGRGRKDEVGKTLEEEEELLQRHEDTRNKHPYPTGQHTHQSQGTLRARSF
Sbjct: 1 MLDRSIVESEHLEPSSPGWPVFLRVNPLLTWDYGQIWDFLRRFSLPYCRLYDEGYTSLGDTRTTVRNPALRRLEGGYRPAYALENWTLERANRRVADRKEDAMEEEKGRDADGQVDDVRVKRREAGWEGALSSPSLVMREEEPTGRGRKDEVGKTLEEEEELLQRHEDTRNKHPYPTGQHTHQSQGTLRARSF 193
BLAST of EWM30113.1 vs. NCBI_GenBank
Match: gi|676379227|ref|XP_009032892.1| (hypothetical protein AURANDRAFT_8492, partial [Aureococcus anophagefferens] >gi|323456381|gb|EGB12248.1| hypothetical protein AURANDRAFT_8492, partial [Aureococcus anophagefferens]) HSP 1 Score: 108.997 bits (271), Expect = 1.395e-27 Identity = 52/91 (57.14%), Postives = 62/91 (68.13%), Query Frame = 0
Query: 3 DRSIVESEHLEPSSPGWPVFLRVNPLLTWDYGQIWDFLRRFSLPYCRLYDEGYTSLGDTRTTVRNPALRRLEGGYRPAYALENWTLERANR 93
D + + + EPSS P F+RVNP+L W YG +W FLR F LPYC LYD GYTSLG TT RNPAL G Y+PA+ LE+W+LERA R
Sbjct: 14 DPNCGDQKAFEPSSDWMPPFMRVNPILDWTYGDVWAFLRAFDLPYCALYDGGYTSLGSAPTTSRNPALLGDGGAYKPAHLLEDWSLERAGR 104
BLAST of EWM30113.1 vs. NCBI_GenBank
Match: gi|1040298153|gb|OBS83131.1| (hypothetical protein A6R68_22909 [Neotoma lepida]) HSP 1 Score: 112.849 bits (281), Expect = 9.469e-26 Identity = 53/87 (60.92%), Postives = 59/87 (67.82%), Query Frame = 0
Query: 11 HLEPSSPGWPVFLRVNPLLTWDYGQIWDFLRRFSLPYCRLYDEGYTSLGDTRTTVRNPALRRLEGG----YRPAYALENWTLERANR 93
H P+ PGWP F+RVNPLL W Y IWDFLR+ +PYC LYD GYTSLG TVRNPAL+ L G YRPAY LEN ER +R
Sbjct: 405 HFSPTDPGWPSFMRVNPLLDWSYRNIWDFLRQLFVPYCILYDRGYTSLGSQENTVRNPALKCLSPGGHPIYRPAYLLENEDEERNSR 491
BLAST of EWM30113.1 vs. NCBI_GenBank
Match: gi|93099905|gb|AAH09152.2| (Lenep protein, partial [Mus musculus]) HSP 1 Score: 104.76 bits (260), Expect = 1.863e-25 Identity = 49/87 (56.32%), Postives = 58/87 (66.67%), Query Frame = 0
Query: 11 HLEPSSPGWPVFLRVNPLLTWDYGQIWDFLRRFSLPYCRLYDEGYTSLGDTRTTVRNPALRRLEGG----YRPAYALENWTLERANR 93
H P+ PGWP F+R+NPLL W Y IW+FLR+ +PYC LYD GYTSLG T +NPAL+ L G YRPAY LEN ER +R
Sbjct: 52 HFSPTDPGWPSFMRINPLLDWTYRNIWEFLRQLFVPYCILYDRGYTSLGSRENTTQNPALKCLSPGGHPVYRPAYLLENEDEERNSR 138
BLAST of EWM30113.1 vs. NCBI_GenBank
Match: gi|1149850521|ref|XP_020140885.1| (FAD synthase isoform X3 [Microcebus murinus]) HSP 1 Score: 107.842 bits (268), Expect = 1.892e-25 Identity = 51/86 (59.30%), Postives = 58/86 (67.44%), Query Frame = 0
Query: 12 LEPSSPGWPVFLRVNPLLTWDYGQIWDFLRRFSLPYCRLYDEGYTSLGDTRTTVRNPALRRLEGG----YRPAYALENWTLERANR 93
P+ PGWP F+R+NPLL W Y IWDFLR+ +PYC LYD GYTSLG TVRNPAL+ L G YRPAY LEN ER +R
Sbjct: 163 FSPTDPGWPSFMRINPLLDWTYRDIWDFLRQLFVPYCILYDRGYTSLGSQENTVRNPALKCLSPGGRLTYRPAYLLENEDEERNSR 248
BLAST of EWM30113.1 vs. NCBI_GenBank
Match: gi|873231991|emb|CEM06680.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 112.464 bits (280), Expect = 2.126e-25 Identity = 51/82 (62.20%), Postives = 58/82 (70.73%), Query Frame = 0
Query: 12 LEPSSPGWPVFLRVNPLLTWDYGQIWDFLRRFSLPYCRLYDEGYTSLGDTRTTVRNPALRRLEGGYRPAYALENWTLERANR 93
EPSS P F+RVNP+L WDYG +W FLR LPYCRLYDEGYTSLG T +NPALR +G Y+PAY L +W ERA R
Sbjct: 307 FEPSSTWMPPFMRVNPILDWDYGSVWHFLRTHGLPYCRLYDEGYTSLGRKDNTWKNPALRNEDGSYQPAYLLADWAKERAGR 388
BLAST of EWM30113.1 vs. NCBI_GenBank
Match: gi|532048926|ref|XP_005367238.1| (PREDICTED: FAD synthase [Microtus ochrogaster] >gi|913514158|ref|XP_013209282.1| PREDICTED: FAD synthase [Microtus ochrogaster]) HSP 1 Score: 110.923 bits (276), Expect = 3.725e-25 Identity = 51/87 (58.62%), Postives = 60/87 (68.97%), Query Frame = 0
Query: 11 HLEPSSPGWPVFLRVNPLLTWDYGQIWDFLRRFSLPYCRLYDEGYTSLGDTRTTVRNPALRRLEGG----YRPAYALENWTLERANR 93
H P+ PGWP F+R+NPLL W Y IWDFLR+ +PYC LYD+GYTSLG TV+NPAL+ L G YRPAY LEN ER +R
Sbjct: 403 HFSPTDPGWPSFMRINPLLDWTYRDIWDFLRQLFVPYCVLYDQGYTSLGSRENTVQNPALKCLSPGGHPIYRPAYLLENEDEERDSR 489
BLAST of EWM30113.1 vs. NCBI_GenBank
Match: gi|1214703198|gb|OWZ15256.1| (FAD synthetase [Phytophthora megakarya]) HSP 1 Score: 108.227 bits (269), Expect = 4.229e-25 Identity = 52/92 (56.52%), Postives = 59/92 (64.13%), Query Frame = 0
Query: 8 ESEHLEPSSPGWPVFLRVNPLLTWDYGQIWDFLRRFSLPYCRLYDEGYTSLGDTRTTVRNPALRR-----LEGGYRPAYALENWTLERANRR 94
E EH PSSPGWP FLRVNP+L W Y +W FLR L YC LYD GYTSLG+ TV+NP L R EG Y PAY L++ T ER R+
Sbjct: 189 EMEHFSPSSPGWPPFLRVNPVLQWTYADVWSFLRDCQLEYCSLYDHGYTSLGNIFDTVQNPELWRKGEDGKEGYYLPAYKLKDGTSERCGRQ 280
BLAST of EWM30113.1 vs. NCBI_GenBank
Match: gi|1189392867|gb|OSX79772.1| (hypothetical protein BU14_0071s0026 [Porphyra umbilicalis]) HSP 1 Score: 104.375 bits (259), Expect = 4.398e-25 Identity = 48/82 (58.54%), Postives = 55/82 (67.07%), Query Frame = 0
Query: 12 LEPSSPGWPVFLRVNPLLTWDYGQIWDFLRRFSLPYCRLYDEGYTSLGDTRTTVRNPALRRLEGGYRPAYALENWTLERANR 93
EPSSPGWP F+RVN +L W Y +W FLRR+ LPY +YD G+TSLG TV NP LRR GGY PAY L + ERA R
Sbjct: 67 FEPSSPGWPPFMRVNAVLDWTYADVWHFLRRWRLPYAPIYDAGFTSLGGVSNTVANPTLRRPGGGYAPAYCLADARDERAGR 148
BLAST of EWM30113.1 vs. NCBI_GenBank
Match: gi|731259470|ref|XP_010642210.1| (PREDICTED: FAD synthase isoform X1 [Fukomys damarensis] >gi|731259472|ref|XP_010642211.1| PREDICTED: FAD synthase isoform X1 [Fukomys damarensis] >gi|676269575|gb|KFO24931.1| FAD synthase [Fukomys damarensis]) HSP 1 Score: 110.538 bits (275), Expect = 5.688e-25 Identity = 51/86 (59.30%), Postives = 58/86 (67.44%), Query Frame = 0
Query: 12 LEPSSPGWPVFLRVNPLLTWDYGQIWDFLRRFSLPYCRLYDEGYTSLGDTRTTVRNPALRRLEGG----YRPAYALENWTLERANR 93
P+ PGWPVF+R+NPLL W Y IWDFLR+ +PYC LYD+GYTSLG TVRNPAL+ L G YRPAY LE ER R
Sbjct: 400 FSPTDPGWPVFMRINPLLDWTYSNIWDFLRQLFIPYCVLYDQGYTSLGSPENTVRNPALKCLSPGGPPTYRPAYLLEKEEEERNAR 485 The following BLAST results are available for this feature:
BLAST of EWM30113.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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