EWM25062.1, cds5598 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25062.1 vs. NCBI_GenBank
Match: gi|585106699|gb|EWM25062.1| (protein binding protein [Nannochloropsis gaditana]) HSP 1 Score: 475.322 bits (1222), Expect = 2.071e-169 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
Query: 1 MAAAGLMWGAGLIVFSPISCVFILVVTRRPELVIIAISGAFAYLVALLLSSALWAMFGPVKQTAAIMVVLGVLCQVVMRAVLYRLYHRTEILIKSANHPVLHMPLNDITSSLAAGTGYGLMHAVMIFGSVLASGNSDPGVLFAPSCTRTPLVVVLALLALAFTMMDLSFMALTFLYLRRRKCFRMGVIFLMHSAASGLTILNDVENGCTMSLPLVYVVMVATVLVTFREWRQLNEDT 237
MAAAGLMWGAGLIVFSPISCVFILVVTRRPELVIIAISGAFAYLVALLLSSALWAMFGPVKQTAAIMVVLGVLCQVVMRAVLYRLYHRTEILIKSANHPVLHMPLNDITSSLAAGTGYGLMHAVMIFGSVLASGNSDPGVLFAPSCTRTPLVVVLALLALAFTMMDLSFMALTFLYLRRRKCFRMGVIFLMHSAASGLTILNDVENGCTMSLPLVYVVMVATVLVTFREWRQLNEDT
Sbjct: 1 MAAAGLMWGAGLIVFSPISCVFILVVTRRPELVIIAISGAFAYLVALLLSSALWAMFGPVKQTAAIMVVLGVLCQVVMRAVLYRLYHRTEILIKSANHPVLHMPLNDITSSLAAGTGYGLMHAVMIFGSVLASGNSDPGVLFAPSCTRTPLVVVLALLALAFTMMDLSFMALTFLYLRRRKCFRMGVIFLMHSAASGLTILNDVENGCTMSLPLVYVVMVATVLVTFREWRQLNEDT 237
BLAST of EWM25062.1 vs. NCBI_GenBank
Match: gi|695371956|ref|XP_009514690.1| (hypothetical protein PHYSODRAFT_471038 [Phytophthora sojae] >gi|348687601|gb|EGZ27415.1| hypothetical protein PHYSODRAFT_471038 [Phytophthora sojae]) HSP 1 Score: 161.384 bits (407), Expect = 1.742e-45 Identity = 81/211 (38.39%), Postives = 131/211 (62.09%), Query Frame = 0
Query: 6 LMWGAGLIVFSPISCVFILVVTRRPELVIIAISGAFAYLVALLLSSALWAMFGPVKQTAAIMVVLGVLCQVVMRAVLYRLYHRTEILIKSANHPVLHMPLNDITSSLAAGTGYGLMHAVMIFGSVLASGNSDPGVLFAPSCTRTPLVVVLALLALAFTMMDLSFMALTFLYLRRRKCFRMGVIFLMHSAASGLTILNDVENGCTMSLPLVY 216
L +G+ L+ F P++ +F +VV +R +LVI+A+SGAF +LVA+L+++ LW + P+K + + V +GV+ Q R + + LY RTE+ +K +PLNDITSSLA G G+ +MHA+++FGS++ S G F+ SC PLV A+ LA T +D++ M + F R+R +G +F++H + + N NGC +S+P+ Y
Sbjct: 12 LFFGSILVGFGPLAALFFVVVAKRAQLVILALSGAFVWLVAILVTATLWQIIPPLKTSLSATVPVGVVVQEAFRLLFFYLYTRTELAVKRVTTSSHQLPLNDITSSLAGGVGFSVMHALLMFGSLVGSSTGSRGAAFSASCESIPLVFSAAISTLALTALDVALMVVAFDGYRKRSALAVGAVFVIHMGVALSALANMNTNGCYISIPVHY 222
BLAST of EWM25062.1 vs. NCBI_GenBank
Match: gi|1214710176|gb|OWZ21290.1| (putative membrane protein [Phytophthora megakarya]) HSP 1 Score: 157.918 bits (398), Expect = 3.695e-44 Identity = 80/211 (37.91%), Postives = 129/211 (61.14%), Query Frame = 0
Query: 6 LMWGAGLIVFSPISCVFILVVTRRPELVIIAISGAFAYLVALLLSSALWAMFGPVKQTAAIMVVLGVLCQVVMRAVLYRLYHRTEILIKSANHPVLHMPLNDITSSLAAGTGYGLMHAVMIFGSVLASGNSDPGVLFAPSCTRTPLVVVLALLALAFTMMDLSFMALTFLYLRRRKCFRMGVIFLMHSAASGLTILNDVENGCTMSLPLVY 216
L+ G L+ F P++ +F +VV +R +LVI+A+SGAF +LVA+L+++ LW + P+K + V +GV+ Q R + + LY RTE+ +K +PLND+TSSLA G G+ +MHA+++FGS++ S G F+ SC PLV A+ LA T +D++ M + F R+R +G +F++H + + N NGC +S+P+ Y
Sbjct: 12 LLIGCILVGFGPLAALFFVVVAKRAQLVILALSGAFVWLVAILVTATLWQIIPPLKTSLTATVPVGVVVQEAFRMLFFYLYTRTELAVKRVTTSSHQLPLNDMTSSLAGGVGFSVMHALLMFGSLMGSSTGSRGAAFSASCESIPLVFSAAISTLALTALDVALMVIAFDGYRQRSAIAVGAVFVIHMGVALSALANVNTNGCYISIPVHY 222
BLAST of EWM25062.1 vs. NCBI_GenBank
Match: gi|970631001|gb|KUF77773.1| (Gamma-secretase subunit APH1 [Phytophthora nicotianae]) HSP 1 Score: 156.762 bits (395), Expect = 8.854e-44 Identity = 79/211 (37.44%), Postives = 128/211 (60.66%), Query Frame = 0
Query: 6 LMWGAGLIVFSPISCVFILVVTRRPELVIIAISGAFAYLVALLLSSALWAMFGPVKQTAAIMVVLGVLCQVVMRAVLYRLYHRTEILIKSANHPVLHMPLNDITSSLAAGTGYGLMHAVMIFGSVLASGNSDPGVLFAPSCTRTPLVVVLALLALAFTMMDLSFMALTFLYLRRRKCFRMGVIFLMHSAASGLTILNDVENGCTMSLPLVY 216
L +G L+ F P++ +F +V+ +R +LVI+A+SGAF +LVA+L+++ LW + P+K + + V + V+ Q R V + LY RTE +K +PLNDITSSLA G G+ +MHA+++FGS++ S G F+ SC PL+ A+ LA T +D++ M + F R+R +G +F++H + + N NGC +S+P+ Y
Sbjct: 12 LFFGCILVGFGPLAALFFVVIAKRAQLVILALSGAFVWLVAILVTATLWQIIPPLKTSLSATVPVSVVVQEAFRLVFFYLYTRTEQAVKRVTTSSHQLPLNDITSSLAGGVGFSVMHALLMFGSLVGSSTGSRGAAFSASCESIPLIFSAAISTLALTALDVALMVVAFDGYRKRSVLAVGAVFVIHMGVALSALANMETNGCYISIPVHY 222
BLAST of EWM25062.1 vs. NCBI_GenBank
Match: gi|675209997|ref|XP_008913883.1| (hypothetical protein PPTG_17686 [Phytophthora parasitica INRA-310] >gi|566010556|gb|ETI33467.1| hypothetical protein F443_19850 [Phytophthora parasitica P1569] >gi|567948045|gb|ETK73805.1| hypothetical protein L915_19297 [Phytophthora parasitica] >gi|567976718|gb|ETL27234.1| hypothetical protein L916_19193 [Phytophthora parasitica] >gi|568006220|gb|ETL80489.1| hypothetical protein L917_19018 [Phytophthora parasitica] >gi|568036076|gb|ETM33692.1| hypothetical protein L914_19093 [Phytophthora parasitica] >gi|568085933|gb|ETN00832.1| hypothetical protein PPTG_17686 [Phytophthora parasitica INRA-310] >gi|570314279|gb|ETO62227.1| hypothetical protein F444_19836 [Phytophthora parasitica P1976] >gi|570938056|gb|ETP03313.1| hypothetical protein F441_19702 [Phytophthora parasitica CJ01A1] >gi|570968356|gb|ETP31475.1| hypothetical protein F442_19656 [Phytophthora parasitica P10297]) HSP 1 Score: 156.762 bits (395), Expect = 8.854e-44 Identity = 79/211 (37.44%), Postives = 128/211 (60.66%), Query Frame = 0
Query: 6 LMWGAGLIVFSPISCVFILVVTRRPELVIIAISGAFAYLVALLLSSALWAMFGPVKQTAAIMVVLGVLCQVVMRAVLYRLYHRTEILIKSANHPVLHMPLNDITSSLAAGTGYGLMHAVMIFGSVLASGNSDPGVLFAPSCTRTPLVVVLALLALAFTMMDLSFMALTFLYLRRRKCFRMGVIFLMHSAASGLTILNDVENGCTMSLPLVY 216
L +G L+ F P++ +F +V+ +R +LVI+A+SGAF +LVA+L+++ LW + P+K + + V + V+ Q R V + LY RTE +K +PLNDITSSLA G G+ +MHA+++FGS++ S G F+ SC PL+ A+ LA T +D++ M + F R+R +G +F++H + + N NGC +S+P+ Y
Sbjct: 12 LFFGCILVGFGPLAALFFVVIAKRAQLVILALSGAFVWLVAILVTATLWQIIPPLKTSLSATVPVSVVVQEAFRLVFFYLYTRTEQAVKRVTTSSHQLPLNDITSSLAGGVGFSVMHALLMFGSLVGSSTGSRGAAFSASCESIPLIFSAAISTLALTALDVALMVVAFDGYRKRSVLAVGAVFVIHMGVALSALANMETNGCYISIPVHY 222
BLAST of EWM25062.1 vs. NCBI_GenBank
Match: gi|1173949785|gb|OQR97789.1| (hypothetical protein ACHHYP_10010 [Achlya hypogyna]) HSP 1 Score: 155.992 bits (393), Expect = 1.309e-43 Identity = 78/216 (36.11%), Postives = 127/216 (58.80%), Query Frame = 0
Query: 1 MAAAGLMWGAGLIVFSPISCVFILVVTRRPELVIIAISGAFAYLVALLLSSALWAMFGPVKQTAAIMVVLGVLCQVVMRAVLYRLYHRTEILIKSANHPVLHMPLNDITSSLAAGTGYGLMHAVMIFGSVLASGNSDPGVLFAPSCTRTPLVVVLALLALAFTMMDLSFMALTFLYLRRRKCFRMGVIFLMHSAASGLTILNDVENGCTMSLPLVY 216
MA L WG+ L F+PI+ +F++VV +R +LVI+ I+ AF YL+ LL+++ +W + P++ + + + +L Q V R + + +Y R E+ +K +PLND+T+S A+G G+ LM A+M++G+VLAS G F +C PLV AL LA T+MD++ M + F R++ + + L+H + +LN E GC S+PL Y
Sbjct: 1 MAEWALFWGSLLTAFAPIAALFLMVVAQRAQLVILCITAAFFYLLGLLVAATVWTVITPLQSSVQATIPIAILLQEVFRYIFFNVYVRCELAVKKVTTKQNQLPLNDLTTSFASGVGFALMRALMLYGTVLASSVQGEGAAFTDTCASVPLVFASALSTLALTIMDVALMIVAFEGFRKKSAPHIAAVVLIHLGSGLSNMLNLNEVGCKASIPLTY 216
BLAST of EWM25062.1 vs. NCBI_GenBank
Match: gi|813135219|ref|XP_012198417.1| (hypothetical protein SPRG_04617 [Saprolegnia parasitica CBS 223.65] >gi|641536844|gb|KDO30715.1| hypothetical protein SPRG_04617 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 155.221 bits (391), Expect = 3.384e-43 Identity = 80/217 (36.87%), Postives = 128/217 (58.99%), Query Frame = 0
Query: 1 MAAAGLMWGAGLIVFSPISCVFILVVTRRPELVIIAISGAFAYLVALLLSSALWAMFGPVKQTAAIMVVLGVLCQVVMRAVLYRLYHRTEILIKSANHPVLHMPLNDITSSLAAGTGYGLMHAVMIFGSVLASGNSDPGVLFAPSCTRTPLVVVLALLALAFTMMDLSFMALTFLYLRRRKCFRMGVIFLMHSAASGLTILNDVENGCTMSLPLVYV 217
MA L WG+ L F+PIS +F+LVV +R +LVI+AI+ AF YL+ LL+++ +W P++ + + + +L Q + R + + +Y R E+ +K +PLND+T++ A+G G+ LM A+M++G+VLA+ G F SC PLV AL LA T+MD++ M + F R++ + + L+H + +LN E GC S+PL YV
Sbjct: 1 MAEWVLFWGSLLTAFAPISALFLLVVAQRAQLVILAITAAFFYLLGLLVAATVWTAIPPLQTSIQATIPISILIQELFRYLFFNVYVRCELAVKKVTTKQNQLPLNDLTTAFASGVGFALMRALMLYGTVLAASVQGEGAAFTDSCPSVPLVFASALSTLALTLMDVALMIVAFEGFRKKSVAHIAAVVLIHLGSGLSNMLNLNEVGCKASIPLTYV 217
BLAST of EWM25062.1 vs. NCBI_GenBank
Match: gi|301094294|ref|XP_002896253.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262109648|gb|EEY67700.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 155.221 bits (391), Expect = 3.922e-43 Identity = 79/211 (37.44%), Postives = 127/211 (60.19%), Query Frame = 0
Query: 6 LMWGAGLIVFSPISCVFILVVTRRPELVIIAISGAFAYLVALLLSSALWAMFGPVKQTAAIMVVLGVLCQVVMRAVLYRLYHRTEILIKSANHPVLHMPLNDITSSLAAGTGYGLMHAVMIFGSVLASGNSDPGVLFAPSCTRTPLVVVLALLALAFTMMDLSFMALTFLYLRRRKCFRMGVIFLMHSAASGLTILNDVENGCTMSLPLVY 216
L +G L+ P++ +F +VV +R +LVI+A+SGAF +LVA+L+++ LW + P+K + + V +GV+ Q R + + LY RTE +K +PLNDITSSLA G G+ +MHA+++FGS++ S G F+ SC PL+ A+ LA T +D++ M + F R+R +G +F++H + + N NGC +S+P Y
Sbjct: 12 LFFGCILVGIGPLAALFFVVVAKRAQLVILALSGAFVWLVAILVTATLWQIIPPLKTSLSATVPVGVVIQEAFRLLFFYLYTRTEQAVKRVTTSSHQLPLNDITSSLAGGVGFSVMHALLMFGSLVGSSTGSRGAAFSASCESIPLIFSAAISTLALTALDVALMVVAFDGYRKRSALAVGAVFVIHMGVALSALANMETNGCYISIPAHY 222
BLAST of EWM25062.1 vs. NCBI_GenBank
Match: gi|669144660|ref|XP_008607892.1| (hypothetical protein SDRG_04021 [Saprolegnia diclina VS20] >gi|530740058|gb|EQC38300.1| hypothetical protein SDRG_04021 [Saprolegnia diclina VS20]) HSP 1 Score: 153.68 bits (387), Expect = 1.208e-42 Identity = 79/216 (36.57%), Postives = 127/216 (58.80%), Query Frame = 0
Query: 1 MAAAGLMWGAGLIVFSPISCVFILVVTRRPELVIIAISGAFAYLVALLLSSALWAMFGPVKQTAAIMVVLGVLCQVVMRAVLYRLYHRTEILIKSANHPVLHMPLNDITSSLAAGTGYGLMHAVMIFGSVLASGNSDPGVLFAPSCTRTPLVVVLALLALAFTMMDLSFMALTFLYLRRRKCFRMGVIFLMHSAASGLTILNDVENGCTMSLPLVY 216
MA L WG+ L F+PIS +F+LVV +R +LVI+AI+ AF YL+ LL+++ +W P++ + + + +L Q + R + + +Y R E+ +K +PLND+T++ A+G G+ LM A+M++G+VLA+ G F SC PLV AL LA T+MD++ M + F R++ + + L+H + +LN E GC S+PL Y
Sbjct: 1 MAEWVLFWGSLLTAFAPISALFLLVVAQRAQLVILAITAAFFYLLGLLVAATVWTAIPPLQTSIQATIPISILIQELFRYLFFNVYVRCELAVKKVTTKQNQLPLNDLTTAFASGVGFALMRALMLYGTVLAASVQGEGAAFTDSCPSVPLVFASALSTLALTLMDVALMIVAFEGFRKKSVAHIAAVVLIHLGSGLSNMLNLNEVGCKASIPLTY 216
BLAST of EWM25062.1 vs. NCBI_GenBank
Match: gi|673050799|ref|XP_008879360.1| (hypothetical protein H310_13585 [Aphanomyces invadans] >gi|574465021|gb|ETV92063.1| hypothetical protein H310_13585 [Aphanomyces invadans]) HSP 1 Score: 152.91 bits (385), Expect = 2.259e-42 Identity = 81/213 (38.03%), Postives = 126/213 (59.15%), Query Frame = 0
Query: 5 GLMWGAGLIVFSPISCVFILVVTRRPELVIIAISGAFAYLVALLLSSALWAMFGPVKQTAAIMVVLGVLCQVVMRAVLYRLYHRTEILIKSANHPVLHMPLNDITSSLAAGTGYGLMHAVMIFGSVLASGNSDPGVLFAPSCTRTPLVVVLALLALAFTMMDLSFMALTFLYLRRRKCFRMGVIFLMHSAASGLTILNDVENGCTMSLPLVYV 217
L WG L F+P+S +F+ VV +R +LVI++I+ AF YL+ LL+++ LW++ P+ + + + +L Q + R + +Y R E +K +PLND+TSS A+G G+ LM A+M++G+VLAS + G F +C + PLV AL LA T+MD++ M L F R+R + + L+H + +LN E GCT S+PL YV
Sbjct: 5 ALFWGCMLTGFAPVSFLFLTVVAQRAQLVILSITAAFFYLLGLLVAATLWSVIPPLHDSIHATIPVAILVQELFRYAFFVVYIRCEQAVKRVTTKQNQLPLNDLTSSFASGVGFALMRALMLYGTVLASSMAGEGAAFTATCPQIPLVFASALSTLALTLMDIALMILAFEGYRKRSATHIVAVVLLHLGSGLSNMLNLNEVGCTASIPLTYV 217 The following BLAST results are available for this feature:
BLAST of EWM25062.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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