EWM25081.1, cds5596 (CDS) Nannochloropsis gaditana

Overview
NameEWM25081.1
Unique Namecds5596
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:404193..404251 +
Alignment locationCM002466.1:404372..404624 +
Alignment locationCM002466.1:404709..405023 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25081.1
Productmolybdenum cofactor synthesis isoform cra_a
Orig transcript idgnl|cribi|Naga_100098g7.5275.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:404193..404251 +
CM002466.1supercontigCM002466.1:404372..404624 +
CM002466.1supercontigCM002466.1:404709..405023 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0019538protein metabolic process
GO:0006777Mo-molybdopterin cofactor biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0030366molybdopterin synthase activity
Vocabulary: Cellular Component
TermDefinition
GO:0019008molybdopterin synthase complex
GO:0005829cytosol
Vocabulary: INTERPRO
TermDefinition
IPR028888MOCS2B_euk
IPR003448Mopterin_biosynth_MoaE
Homology
BLAST of EWM25081.1 vs. NCBI_GenBank
Match: gi|585106718|gb|EWM25081.1| (molybdenum cofactor synthesis isoform cra_a [Nannochloropsis gaditana])

HSP 1 Score: 429.098 bits (1102), Expect = 3.819e-152
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0
Query:    1 MQRSRVRIGEQSSSQSCFFFTSLCLFPSRGTLLVEGIMTTYVRVTDSKLDLNTLIMKVEDTGAGAIATFLGVTRDNFQGKRVVRLDYEGYVPMAENVMHSIASEVRSRWEVLSIAMEHRIGVCPVGEPSVVIAISSAHRREALEAVAFAIDSIKGNVPIWKKEIYADGSYHRGPDGSSVECGGSPVVKSAWKKNVEWEGGDENISKRS 208
            MQRSRVRIGEQSSSQSCFFFTSLCLFPSRGTLLVEGIMTTYVRVTDSKLDLNTLIMKVEDTGAGAIATFLGVTRDNFQGKRVVRLDYEGYVPMAENVMHSIASEVRSRWEVLSIAMEHRIGVCPVGEPSVVIAISSAHRREALEAVAFAIDSIKGNVPIWKKEIYADGSYHRGPDGSSVECGGSPVVKSAWKKNVEWEGGDENISKRS
Sbjct:    1 MQRSRVRIGEQSSSQSCFFFTSLCLFPSRGTLLVEGIMTTYVRVTDSKLDLNTLIMKVEDTGAGAIATFLGVTRDNFQGKRVVRLDYEGYVPMAENVMHSIASEVRSRWEVLSIAMEHRIGVCPVGEPSVVIAISSAHRREALEAVAFAIDSIKGNVPIWKKEIYADGSYHRGPDGSSVECGGSPVVKSAWKKNVEWEGGDENISKRS 208          
BLAST of EWM25081.1 vs. NCBI_GenBank
Match: gi|762159053|ref|XP_011417725.1| (PREDICTED: molybdopterin synthase catalytic subunit [Crassostrea gigas] >gi|762159055|ref|XP_011417726.1| PREDICTED: molybdopterin synthase catalytic subunit [Crassostrea gigas])

HSP 1 Score: 163.31 bits (412), Expect = 5.319e-48
Identity = 73/129 (56.59%), Postives = 95/129 (73.64%), Query Frame = 0
Query:   41 YVRVTDSKLDLNTLIMKVEDTGAGAIATFLGVTRDNFQGKRVVRLDYEGYVPMAENVMHSIASEVRSRWEVLSIAMEHRIGVCPVGEPSVVIAISSAHRREALEAVAFAIDSIKGNVPIWKKEIYADGS 169
            Y+ +TD  LD+N +   V D   GAI+ F+G+TRDNF GK+V+RL+YE Y PMA+  M  I   +R +WE+ SIAM HRI V P+ E S+VIAISS HR+E+L+AV +AID++K  VPIWKKEIYAD S
Sbjct:    3 YIEITDEILDVNEISQMVTDPSCGAISIFVGITRDNFDGKKVLRLEYEAYKPMAKKKMKEICDSIRKQWEIHSIAMIHRINVVPISEASIVIAISSPHRKESLQAVEYAIDTLKATVPIWKKEIYADES 131          
BLAST of EWM25081.1 vs. NCBI_GenBank
Match: gi|762069470|ref|XP_011426503.1| (PREDICTED: molybdopterin synthase catalytic subunit [Crassostrea gigas] >gi|762069472|ref|XP_011434216.1| PREDICTED: molybdopterin synthase catalytic subunit [Crassostrea gigas] >gi|405956636|gb|EKC23108.1| Molybdenum cofactor synthesis protein 2B [Crassostrea gigas])

HSP 1 Score: 161.384 bits (407), Expect = 3.075e-47
Identity = 72/129 (55.81%), Postives = 95/129 (73.64%), Query Frame = 0
Query:   41 YVRVTDSKLDLNTLIMKVEDTGAGAIATFLGVTRDNFQGKRVVRLDYEGYVPMAENVMHSIASEVRSRWEVLSIAMEHRIGVCPVGEPSVVIAISSAHRREALEAVAFAIDSIKGNVPIWKKEIYADGS 169
            Y+ +TD  LD+N +   V D   GAI+ F+G+TRDNF GK+V+RL+YE Y PMA+  M  I   +R +WE+ +IAM HRI V P+ E S+VIAISS HR+E+L+AV +AID++K  VPIWKKEIYAD S
Sbjct:    3 YIEITDEILDVNKISHMVTDPSCGAISIFVGITRDNFDGKKVLRLEYEAYKPMAKKKMKEICDSIRKQWEIHNIAMIHRINVVPISEASIVIAISSPHRKESLQAVEYAIDTLKATVPIWKKEIYADES 131          
BLAST of EWM25081.1 vs. NCBI_GenBank
Match: gi|302839687|ref|XP_002951400.1| (hypothetical protein VOLCADRAFT_61348 [Volvox carteri f. nagariensis] >gi|300263375|gb|EFJ47576.1| hypothetical protein VOLCADRAFT_61348 [Volvox carteri f. nagariensis])

HSP 1 Score: 159.073 bits (401), Expect = 4.309e-46
Identity = 75/131 (57.25%), Postives = 96/131 (73.28%), Query Frame = 0
Query:   39 TTYVRVTDSKLDLNTLIMKVEDTGAGAIATFLGVTRDNFQGKRVVRLDYEGYVPMAENVMHSIASEVRSRWEVLSIAMEHRIGVCPVGEPSVVIAISSAHRREALEAVAFAIDSIKGNVPIWKKEIYADGS 169
              +V +T++ LD+   +  V D GAGAI+TF GVTR+NFQGK V++LDYE YVPMA   +  +A EV  RW V  +A+ HR G+  VGEPSV+IA+SSAHRRE+LEAV +AID +K  VPIWKKE + DGS
Sbjct:    7 NVFVEITENDLDICKCMELVADPGAGAISTFNGVTRNNFQGKTVIKLDYEAYVPMALKKLQELAHEVGRRWNVCKVAVAHRKGIVLVGEPSVIIAVSSAHRRESLEAVQWAIDELKAVVPIWKKEFFEDGS 137          
BLAST of EWM25081.1 vs. NCBI_GenBank
Match: gi|159486042|ref|XP_001701053.1| (hypothetical protein CHLREDRAFT_98436 [Chlamydomonas reinhardtii] >gi|158281552|gb|EDP07307.1| predicted protein, partial [Chlamydomonas reinhardtii])

HSP 1 Score: 157.918 bits (398), Expect = 4.984e-46
Identity = 72/129 (55.81%), Postives = 95/129 (73.64%), Query Frame = 0
Query:   41 YVRVTDSKLDLNTLIMKVEDTGAGAIATFLGVTRDNFQGKRVVRLDYEGYVPMAENVMHSIASEVRSRWEVLSIAMEHRIGVCPVGEPSVVIAISSAHRREALEAVAFAIDSIKGNVPIWKKEIYADGS 169
            +  VT   LD++  +  V D GAGAI+TF GVTR+NFQGK V++LDYE Y PMA   +  +A +V ++W V  +A+ HR+G   VGEPSV+IA+SSAHRRE+LEAV +AID +K +VPIWKKE + DGS
Sbjct:    5 FCEVTSDPLDISRYVELVADPGAGAISTFTGVTRNNFQGKTVIKLDYEAYTPMALKKLQELAHQVTNKWSVCKVAIAHRVGTVLVGEPSVIIAVSSAHRRESLEAVHWAIDELKASVPIWKKEFFEDGS 133          
BLAST of EWM25081.1 vs. NCBI_GenBank
Match: gi|545357096|ref|XP_005644219.1| (Molybdopterin biosynthesis MoaE [Coccomyxa subellipsoidea C-169] >gi|384246184|gb|EIE19675.1| Molybdopterin biosynthesis MoaE [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 155.606 bits (392), Expect = 5.593e-45
Identity = 74/128 (57.81%), Postives = 92/128 (71.88%), Query Frame = 0
Query:   41 YVRVTDSKLDLNTLIMKVEDTGAGAIATFLGVTRDNFQGKRVVRLDYEGYVPMAENVMHSIASEVRSRWEVLSIAMEHRIGVCPVGEPSVVIAISSAHRREALEAVAFAIDSIKGNVPIWKKEIYADG 168
            +V V    L+LN  +  VED G+GAIATF+GVTRDNF GK+V+ L YE YVPMAE  M  I  +   +W++  +A+ HRIG   VGEPSV+IA+SSAHRREALEA  +AID +K  VPIWKKE+Y  G
Sbjct:    2 FVEVLPDPLELNKYVGFVEDNGSGAIATFMGVTRDNFDGKKVLSLSYEAYVPMAEKEMQVICRKAHDKWDLKKMAVAHRIGHVGVGEPSVIIAVSSAHRREALEACHWAIDELKATVPIWKKELYEGG 129          
BLAST of EWM25081.1 vs. NCBI_GenBank
Match: gi|1183476658|gb|ORZ00608.1| (molybdopterin synthase catalytic subunit-like protein [Syncephalastrum racemosum])

HSP 1 Score: 151.369 bits (381), Expect = 2.016e-43
Identity = 74/134 (55.22%), Postives = 89/134 (66.42%), Query Frame = 0
Query:   41 YVRVTDSKL-DLNTLIMKVEDTGAGAIATFLGVTRDNFQGKRVVRLDYEGYVPMAENVMHSIASEVRSRWEVLSIAMEHRIGVCPVGEPSVVIAISSAHRREALEAVAFAIDSIKGNVPIWKKEIYADGSYHRG 173
            ++ +TD +L  L+ +  KV D  AGAIATF G TRD FQGKRVVRLDYE Y PMA  V+  +  E R  W++  IA+ HRIG  P+G  SVVIA SS HR EAL A  F ID +K   PIWKKE+Y DGS  +G
Sbjct:    3 FIEITDQELPTLDVISKKVHDNAAGAIATFSGTTRDTFQGKRVVRLDYEAYEPMAVKVLKELTEEARRLWDLTHIAIYHRIGTVPIGGTSVVIACSSVHRAEALHATEFLIDHLKARCPIWKKEVYEDGSVWKG 136          
BLAST of EWM25081.1 vs. NCBI_GenBank
Match: gi|405953999|gb|EKC21549.1| (Molybdenum cofactor synthesis protein 2B [Crassostrea gigas])

HSP 1 Score: 151.369 bits (381), Expect = 2.430e-43
Identity = 67/122 (54.92%), Postives = 89/122 (72.95%), Query Frame = 0
Query:   41 YVRVTDSKLDLNTLIMKVEDTGAGAIATFLGVTRDNFQGKRVVRLDYEGYVPMAENVMHSIASEVRSRWEVLSIAMEHRIGVCPVGEPSVVIAISSAHRREALEAVAFAIDSIKGNVPIWKK 162
            Y+ +TD  LD+N +   V D   GAI+ F+G+TRDNF GK+V+RL+YE Y PMA+  M  I   +R +WE+ SIAM HRI V P+ E S+VIAISS HR+E+L+AV +AID++K  VPIWKK
Sbjct:    3 YIEITDEILDVNEISQMVTDPSCGAISIFVGITRDNFDGKKVLRLEYEAYKPMAKKKMKEICDSIRKQWEIHSIAMIHRINVVPISEASIVIAISSPHRKESLQAVEYAIDTLKATVPIWKK 124          
BLAST of EWM25081.1 vs. NCBI_GenBank
Match: gi|676457950|ref|XP_009054817.1| (hypothetical protein LOTGIDRAFT_189273, partial [Lottia gigantea] >gi|556105886|gb|ESO94538.1| hypothetical protein LOTGIDRAFT_189273, partial [Lottia gigantea])

HSP 1 Score: 150.984 bits (380), Expect = 2.479e-43
Identity = 68/129 (52.71%), Postives = 95/129 (73.64%), Query Frame = 0
Query:   41 YVRVTDSKLDLNTLIMKVEDTGAGAIATFLGVTRDNFQGKRVVRLDYEGYVPMAENVMHSIASEVRSRWEVLSIAMEHRIGVCPVGEPSVVIAISSAHRREALEAVAFAIDSIKGNVPIWKKEIYADGS 169
            ++ + + K+D+N+ I  V     GA++TFLG TRDNF GK+VVRL+YE Y+PMA+  M  I   VR +W+V +I M HRIG+ P+ E S++IAISS HR+E+L+A+ FAID++K  VPIWKKE+Y D S
Sbjct:    3 HIDIIEGKIDVNSTIDLVISPSCGAVSTFLGTTRDNFDGKKVVRLEYEAYIPMAKKKMLEICQLVREKWKVENIVMIHRIGLVPIKEASIIIAISSPHRKESLDALQFAIDTLKAIVPIWKKEVYEDES 131          
BLAST of EWM25081.1 vs. NCBI_GenBank
Match: gi|971516874|dbj|GAQ81312.1| (Molybdopterin converting factor subunit 2 [Klebsormidium nitens])

HSP 1 Score: 151.369 bits (381), Expect = 4.431e-43
Identity = 72/128 (56.25%), Postives = 86/128 (67.19%), Query Frame = 0
Query:   41 YVRVTDSKLDLNTLIMKVEDTGAGAIATFLGVTRDNFQGKRVVRLDYEGYVPMAENVMHSIASEVRSRWEVLSIAMEHRIGVCPVGEPSVVIAISSAHRREALEAVAFAIDSIKGNVPIWKKEIYADG 168
            +V VT   L L+     V  T AGAI TF G+TRDNF GK+VVRL+YE Y PMA   +  I SE+RS+W+V  IA+ HR GV  VGEPSV+IA+SS HR   LEA  F ID +K  VPIWKKE+Y  G
Sbjct:   26 FVNVTSEALSLDAAYKAVHSTAAGAITTFSGITRDNFDGKKVVRLEYEAYAPMAIAKLKDICSEIRSKWDVCKIAIFHRTGVVDVGEPSVIIAVSSVHRASGLEAARFGIDELKATVPIWKKELYESG 153          
The following BLAST results are available for this feature:
BLAST of EWM25081.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106718|gb|EWM25081.1|3.819e-152100.00molybdenum cofactor synthesis isoform cra_a [Nanno... [more]
gi|762159053|ref|XP_011417725.1|5.319e-4856.59PREDICTED: molybdopterin synthase catalytic subuni... [more]
gi|762069470|ref|XP_011426503.1|3.075e-4755.81PREDICTED: molybdopterin synthase catalytic subuni... [more]
gi|302839687|ref|XP_002951400.1|4.309e-4657.25hypothetical protein VOLCADRAFT_61348 [Volvox cart... [more]
gi|159486042|ref|XP_001701053.1|4.984e-4655.81hypothetical protein CHLREDRAFT_98436 [Chlamydomon... [more]
gi|545357096|ref|XP_005644219.1|5.593e-4557.81Molybdopterin biosynthesis MoaE [Coccomyxa subelli... [more]
gi|1183476658|gb|ORZ00608.1|2.016e-4355.22molybdopterin synthase catalytic subunit-like prot... [more]
gi|405953999|gb|EKC21549.1|2.430e-4354.92Molybdenum cofactor synthesis protein 2B [Crassost... [more]
gi|676457950|ref|XP_009054817.1|2.479e-4352.71hypothetical protein LOTGIDRAFT_189273, partial [L... [more]
gi|971516874|dbj|GAQ81312.1|4.431e-4356.25Molybdopterin converting factor subunit 2 [Klebsor... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5610rna5610Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications