EWM25081.1, cds5596 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25081.1 vs. NCBI_GenBank
Match: gi|585106718|gb|EWM25081.1| (molybdenum cofactor synthesis isoform cra_a [Nannochloropsis gaditana]) HSP 1 Score: 429.098 bits (1102), Expect = 3.819e-152 Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0
Query: 1 MQRSRVRIGEQSSSQSCFFFTSLCLFPSRGTLLVEGIMTTYVRVTDSKLDLNTLIMKVEDTGAGAIATFLGVTRDNFQGKRVVRLDYEGYVPMAENVMHSIASEVRSRWEVLSIAMEHRIGVCPVGEPSVVIAISSAHRREALEAVAFAIDSIKGNVPIWKKEIYADGSYHRGPDGSSVECGGSPVVKSAWKKNVEWEGGDENISKRS 208
MQRSRVRIGEQSSSQSCFFFTSLCLFPSRGTLLVEGIMTTYVRVTDSKLDLNTLIMKVEDTGAGAIATFLGVTRDNFQGKRVVRLDYEGYVPMAENVMHSIASEVRSRWEVLSIAMEHRIGVCPVGEPSVVIAISSAHRREALEAVAFAIDSIKGNVPIWKKEIYADGSYHRGPDGSSVECGGSPVVKSAWKKNVEWEGGDENISKRS
Sbjct: 1 MQRSRVRIGEQSSSQSCFFFTSLCLFPSRGTLLVEGIMTTYVRVTDSKLDLNTLIMKVEDTGAGAIATFLGVTRDNFQGKRVVRLDYEGYVPMAENVMHSIASEVRSRWEVLSIAMEHRIGVCPVGEPSVVIAISSAHRREALEAVAFAIDSIKGNVPIWKKEIYADGSYHRGPDGSSVECGGSPVVKSAWKKNVEWEGGDENISKRS 208
BLAST of EWM25081.1 vs. NCBI_GenBank
Match: gi|762159053|ref|XP_011417725.1| (PREDICTED: molybdopterin synthase catalytic subunit [Crassostrea gigas] >gi|762159055|ref|XP_011417726.1| PREDICTED: molybdopterin synthase catalytic subunit [Crassostrea gigas]) HSP 1 Score: 163.31 bits (412), Expect = 5.319e-48 Identity = 73/129 (56.59%), Postives = 95/129 (73.64%), Query Frame = 0
Query: 41 YVRVTDSKLDLNTLIMKVEDTGAGAIATFLGVTRDNFQGKRVVRLDYEGYVPMAENVMHSIASEVRSRWEVLSIAMEHRIGVCPVGEPSVVIAISSAHRREALEAVAFAIDSIKGNVPIWKKEIYADGS 169
Y+ +TD LD+N + V D GAI+ F+G+TRDNF GK+V+RL+YE Y PMA+ M I +R +WE+ SIAM HRI V P+ E S+VIAISS HR+E+L+AV +AID++K VPIWKKEIYAD S
Sbjct: 3 YIEITDEILDVNEISQMVTDPSCGAISIFVGITRDNFDGKKVLRLEYEAYKPMAKKKMKEICDSIRKQWEIHSIAMIHRINVVPISEASIVIAISSPHRKESLQAVEYAIDTLKATVPIWKKEIYADES 131
BLAST of EWM25081.1 vs. NCBI_GenBank
Match: gi|762069470|ref|XP_011426503.1| (PREDICTED: molybdopterin synthase catalytic subunit [Crassostrea gigas] >gi|762069472|ref|XP_011434216.1| PREDICTED: molybdopterin synthase catalytic subunit [Crassostrea gigas] >gi|405956636|gb|EKC23108.1| Molybdenum cofactor synthesis protein 2B [Crassostrea gigas]) HSP 1 Score: 161.384 bits (407), Expect = 3.075e-47 Identity = 72/129 (55.81%), Postives = 95/129 (73.64%), Query Frame = 0
Query: 41 YVRVTDSKLDLNTLIMKVEDTGAGAIATFLGVTRDNFQGKRVVRLDYEGYVPMAENVMHSIASEVRSRWEVLSIAMEHRIGVCPVGEPSVVIAISSAHRREALEAVAFAIDSIKGNVPIWKKEIYADGS 169
Y+ +TD LD+N + V D GAI+ F+G+TRDNF GK+V+RL+YE Y PMA+ M I +R +WE+ +IAM HRI V P+ E S+VIAISS HR+E+L+AV +AID++K VPIWKKEIYAD S
Sbjct: 3 YIEITDEILDVNKISHMVTDPSCGAISIFVGITRDNFDGKKVLRLEYEAYKPMAKKKMKEICDSIRKQWEIHNIAMIHRINVVPISEASIVIAISSPHRKESLQAVEYAIDTLKATVPIWKKEIYADES 131
BLAST of EWM25081.1 vs. NCBI_GenBank
Match: gi|302839687|ref|XP_002951400.1| (hypothetical protein VOLCADRAFT_61348 [Volvox carteri f. nagariensis] >gi|300263375|gb|EFJ47576.1| hypothetical protein VOLCADRAFT_61348 [Volvox carteri f. nagariensis]) HSP 1 Score: 159.073 bits (401), Expect = 4.309e-46 Identity = 75/131 (57.25%), Postives = 96/131 (73.28%), Query Frame = 0
Query: 39 TTYVRVTDSKLDLNTLIMKVEDTGAGAIATFLGVTRDNFQGKRVVRLDYEGYVPMAENVMHSIASEVRSRWEVLSIAMEHRIGVCPVGEPSVVIAISSAHRREALEAVAFAIDSIKGNVPIWKKEIYADGS 169
+V +T++ LD+ + V D GAGAI+TF GVTR+NFQGK V++LDYE YVPMA + +A EV RW V +A+ HR G+ VGEPSV+IA+SSAHRRE+LEAV +AID +K VPIWKKE + DGS
Sbjct: 7 NVFVEITENDLDICKCMELVADPGAGAISTFNGVTRNNFQGKTVIKLDYEAYVPMALKKLQELAHEVGRRWNVCKVAVAHRKGIVLVGEPSVIIAVSSAHRRESLEAVQWAIDELKAVVPIWKKEFFEDGS 137
BLAST of EWM25081.1 vs. NCBI_GenBank
Match: gi|159486042|ref|XP_001701053.1| (hypothetical protein CHLREDRAFT_98436 [Chlamydomonas reinhardtii] >gi|158281552|gb|EDP07307.1| predicted protein, partial [Chlamydomonas reinhardtii]) HSP 1 Score: 157.918 bits (398), Expect = 4.984e-46 Identity = 72/129 (55.81%), Postives = 95/129 (73.64%), Query Frame = 0
Query: 41 YVRVTDSKLDLNTLIMKVEDTGAGAIATFLGVTRDNFQGKRVVRLDYEGYVPMAENVMHSIASEVRSRWEVLSIAMEHRIGVCPVGEPSVVIAISSAHRREALEAVAFAIDSIKGNVPIWKKEIYADGS 169
+ VT LD++ + V D GAGAI+TF GVTR+NFQGK V++LDYE Y PMA + +A +V ++W V +A+ HR+G VGEPSV+IA+SSAHRRE+LEAV +AID +K +VPIWKKE + DGS
Sbjct: 5 FCEVTSDPLDISRYVELVADPGAGAISTFTGVTRNNFQGKTVIKLDYEAYTPMALKKLQELAHQVTNKWSVCKVAIAHRVGTVLVGEPSVIIAVSSAHRRESLEAVHWAIDELKASVPIWKKEFFEDGS 133
BLAST of EWM25081.1 vs. NCBI_GenBank
Match: gi|545357096|ref|XP_005644219.1| (Molybdopterin biosynthesis MoaE [Coccomyxa subellipsoidea C-169] >gi|384246184|gb|EIE19675.1| Molybdopterin biosynthesis MoaE [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 155.606 bits (392), Expect = 5.593e-45 Identity = 74/128 (57.81%), Postives = 92/128 (71.88%), Query Frame = 0
Query: 41 YVRVTDSKLDLNTLIMKVEDTGAGAIATFLGVTRDNFQGKRVVRLDYEGYVPMAENVMHSIASEVRSRWEVLSIAMEHRIGVCPVGEPSVVIAISSAHRREALEAVAFAIDSIKGNVPIWKKEIYADG 168
+V V L+LN + VED G+GAIATF+GVTRDNF GK+V+ L YE YVPMAE M I + +W++ +A+ HRIG VGEPSV+IA+SSAHRREALEA +AID +K VPIWKKE+Y G
Sbjct: 2 FVEVLPDPLELNKYVGFVEDNGSGAIATFMGVTRDNFDGKKVLSLSYEAYVPMAEKEMQVICRKAHDKWDLKKMAVAHRIGHVGVGEPSVIIAVSSAHRREALEACHWAIDELKATVPIWKKELYEGG 129
BLAST of EWM25081.1 vs. NCBI_GenBank
Match: gi|1183476658|gb|ORZ00608.1| (molybdopterin synthase catalytic subunit-like protein [Syncephalastrum racemosum]) HSP 1 Score: 151.369 bits (381), Expect = 2.016e-43 Identity = 74/134 (55.22%), Postives = 89/134 (66.42%), Query Frame = 0
Query: 41 YVRVTDSKL-DLNTLIMKVEDTGAGAIATFLGVTRDNFQGKRVVRLDYEGYVPMAENVMHSIASEVRSRWEVLSIAMEHRIGVCPVGEPSVVIAISSAHRREALEAVAFAIDSIKGNVPIWKKEIYADGSYHRG 173
++ +TD +L L+ + KV D AGAIATF G TRD FQGKRVVRLDYE Y PMA V+ + E R W++ IA+ HRIG P+G SVVIA SS HR EAL A F ID +K PIWKKE+Y DGS +G
Sbjct: 3 FIEITDQELPTLDVISKKVHDNAAGAIATFSGTTRDTFQGKRVVRLDYEAYEPMAVKVLKELTEEARRLWDLTHIAIYHRIGTVPIGGTSVVIACSSVHRAEALHATEFLIDHLKARCPIWKKEVYEDGSVWKG 136
BLAST of EWM25081.1 vs. NCBI_GenBank
Match: gi|405953999|gb|EKC21549.1| (Molybdenum cofactor synthesis protein 2B [Crassostrea gigas]) HSP 1 Score: 151.369 bits (381), Expect = 2.430e-43 Identity = 67/122 (54.92%), Postives = 89/122 (72.95%), Query Frame = 0
Query: 41 YVRVTDSKLDLNTLIMKVEDTGAGAIATFLGVTRDNFQGKRVVRLDYEGYVPMAENVMHSIASEVRSRWEVLSIAMEHRIGVCPVGEPSVVIAISSAHRREALEAVAFAIDSIKGNVPIWKK 162
Y+ +TD LD+N + V D GAI+ F+G+TRDNF GK+V+RL+YE Y PMA+ M I +R +WE+ SIAM HRI V P+ E S+VIAISS HR+E+L+AV +AID++K VPIWKK
Sbjct: 3 YIEITDEILDVNEISQMVTDPSCGAISIFVGITRDNFDGKKVLRLEYEAYKPMAKKKMKEICDSIRKQWEIHSIAMIHRINVVPISEASIVIAISSPHRKESLQAVEYAIDTLKATVPIWKK 124
BLAST of EWM25081.1 vs. NCBI_GenBank
Match: gi|676457950|ref|XP_009054817.1| (hypothetical protein LOTGIDRAFT_189273, partial [Lottia gigantea] >gi|556105886|gb|ESO94538.1| hypothetical protein LOTGIDRAFT_189273, partial [Lottia gigantea]) HSP 1 Score: 150.984 bits (380), Expect = 2.479e-43 Identity = 68/129 (52.71%), Postives = 95/129 (73.64%), Query Frame = 0
Query: 41 YVRVTDSKLDLNTLIMKVEDTGAGAIATFLGVTRDNFQGKRVVRLDYEGYVPMAENVMHSIASEVRSRWEVLSIAMEHRIGVCPVGEPSVVIAISSAHRREALEAVAFAIDSIKGNVPIWKKEIYADGS 169
++ + + K+D+N+ I V GA++TFLG TRDNF GK+VVRL+YE Y+PMA+ M I VR +W+V +I M HRIG+ P+ E S++IAISS HR+E+L+A+ FAID++K VPIWKKE+Y D S
Sbjct: 3 HIDIIEGKIDVNSTIDLVISPSCGAVSTFLGTTRDNFDGKKVVRLEYEAYIPMAKKKMLEICQLVREKWKVENIVMIHRIGLVPIKEASIIIAISSPHRKESLDALQFAIDTLKAIVPIWKKEVYEDES 131
BLAST of EWM25081.1 vs. NCBI_GenBank
Match: gi|971516874|dbj|GAQ81312.1| (Molybdopterin converting factor subunit 2 [Klebsormidium nitens]) HSP 1 Score: 151.369 bits (381), Expect = 4.431e-43 Identity = 72/128 (56.25%), Postives = 86/128 (67.19%), Query Frame = 0
Query: 41 YVRVTDSKLDLNTLIMKVEDTGAGAIATFLGVTRDNFQGKRVVRLDYEGYVPMAENVMHSIASEVRSRWEVLSIAMEHRIGVCPVGEPSVVIAISSAHRREALEAVAFAIDSIKGNVPIWKKEIYADG 168
+V VT L L+ V T AGAI TF G+TRDNF GK+VVRL+YE Y PMA + I SE+RS+W+V IA+ HR GV VGEPSV+IA+SS HR LEA F ID +K VPIWKKE+Y G
Sbjct: 26 FVNVTSEALSLDAAYKAVHSTAAGAITTFSGITRDNFDGKKVVRLEYEAYAPMAIAKLKDICSEIRSKWDVCKIAIFHRTGVVDVGEPSVIIAVSSVHRASGLEAARFGIDELKATVPIWKKELYESG 153 The following BLAST results are available for this feature:
BLAST of EWM25081.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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