EWM25072.1, cds5590 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25072.1 vs. NCBI_GenBank
Match: gi|585106709|gb|EWM25072.1| (adp-ribosylation factor gtpase-activating [Nannochloropsis gaditana]) HSP 1 Score: 275.789 bits (704), Expect = 6.407e-94 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 Query: 1 MSALAALRAEGPFPPDILLEIKNSPGNNQCCDCGSFDTEWASVTYGILICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQVFAMRLGSNFQMQEFFRRQRISNTDIRVRYQSKAAGVYRSTLAEAVEKGWDGG 132 MSALAALRAEGPFPPDILLEIKNSPGNNQCCDCGSFDTEWASVTYGILICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQVFAMRLGSNFQMQEFFRRQRISNTDIRVRYQSKAAGVYRSTLAEAVEKGWDGG Sbjct: 1 MSALAALRAEGPFPPDILLEIKNSPGNNQCCDCGSFDTEWASVTYGILICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQVFAMRLGSNFQMQEFFRRQRISNTDIRVRYQSKAAGVYRSTLAEAVEKGWDGG 132
BLAST of EWM25072.1 vs. NCBI_GenBank
Match: gi|553179637|ref|XP_005852734.1| (hypothetical protein NGA_0631820 [Nannochloropsis gaditana CCMP526] >gi|422295797|gb|EKU23096.1| hypothetical protein NGA_0631820 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 268.855 bits (686), Expect = 1.084e-90 Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0 Query: 1 MSALAALRAEGPFPPDILLEIKNSPGNNQCCDCGSFDTEWASVTYGILICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQVFAMRLGSNFQMQEFFRRQRISNTDIRVRYQSKAAGVYRSTLAEAVEKGWD 130 MSALAALRAEGPFPPDILLEIKNSPGNNQCCDCGSFDTEWASVTYGILICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQVFAMRLGSNFQMQEFFRRQRISNTDIRVRYQSKAAGVYRSTLAEAVEKGW+ Sbjct: 1 MSALAALRAEGPFPPDILLEIKNSPGNNQCCDCGSFDTEWASVTYGILICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQVFAMRLGSNFQMQEFFRRQRISNTDIRVRYQSKAAGVYRSTLAEAVEKGWE 130
BLAST of EWM25072.1 vs. NCBI_GenBank
Match: gi|1032151273|gb|OAO14898.1| (ADP-ribosylation factor GTPase-activating protein [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 128.257 bits (321), Expect = 4.261e-33 Identity = 52/115 (45.22%), Postives = 81/115 (70.43%), Query Frame = 0 Query: 13 FPPDILLEIKNSPGNNQCCDCGSFDTEWASVTYGILICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQVFAMRLGSNFQMQEFFRRQRIS-NTDIRVRYQSKAAGVYRSTLAEAVE 126 PP+++ E+++ PGN++C DCG+ + EWASVTYG LIC++C+G HR LGV +S+VRSL +DSW ++ M+ G N ++ +FF+R I + I ++Y +K A +YR+ L VE Sbjct: 4 MPPEVVAEVRSLPGNDRCADCGAENPEWASVTYGSLICVKCAGLHRGLGVHISYVRSLEMDSWEESEIKMMKAGGNQRLLDFFKRHNIERDAPISLKYNTKTAELYRTILKAIVE 118
BLAST of EWM25072.1 vs. NCBI_GenBank
Match: gi|950886540|ref|XP_014526150.1| (hypothetical protein JH06_3736 [Blastocystis sp. subtype 4] >gi|902860761|gb|KNB42707.1| hypothetical protein JH06_3736 [Blastocystis sp. subtype 4]) HSP 1 Score: 122.479 bits (306), Expect = 1.156e-32 Identity = 54/112 (48.21%), Postives = 77/112 (68.75%), Query Frame = 0 Query: 16 DILLEIKNSPGNNQCCDCGSFDTEWASVTYGILICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQVFAMRLGSNFQMQEFFRRQRI-SNTDIRVRYQSKAAGVYRSTLAEAVE 126 +I+ EIK PGN++C DCG WAS++YG LICL+CSG HR LGV +SFVRSL LD+W+ ++ AM++G N QM +FF + I S + V+Y ++ A +YRS + V+ Sbjct: 7 EIMEEIKALPGNDRCADCGEEKPVWASISYGSLICLKCSGLHRGLGVHLSFVRSLELDTWSENEIKAMKMGGNKQMIDFFEKHNIPSEVPVSVKYTTETATLYRSIIKAKVD 118
BLAST of EWM25072.1 vs. NCBI_GenBank
Match: gi|855300971|ref|XP_012893941.1| (uncharacterized protein [Blastocystis hominis] >gi|300120339|emb|CBK19893.2| unnamed protein product [Blastocystis hominis]) HSP 1 Score: 129.028 bits (323), Expect = 1.163e-32 Identity = 55/114 (48.25%), Postives = 81/114 (71.05%), Query Frame = 0 Query: 14 PPDILLEIKNSPGNNQCCDCGSFDTEWASVTYGILICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQVFAMRLGSNFQMQEFFRRQRI-SNTDIRVRYQSKAAGVYRSTLAEAVE 126 P D+LLE++ PGN+ C DCG+ +WASV+YGI +CL CSG HR LGV +SFVRS+ +DSWT +++ AM++G N QM +F + + N+ I+ +Y S+AA +YR +A +E Sbjct: 2 PSDVLLELRKLPGNDVCADCGAARPQWASVSYGIFVCLECSGQHRGLGVHLSFVRSVQMDSWTEREIKAMQVGGNKQMNDFLQEHGVPKNSSIKKKYNSRAAALYREVIAAKIE 115
BLAST of EWM25072.1 vs. NCBI_GenBank
Match: gi|1032149318|gb|OAO13342.1| (ARF-GAP protein [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 121.709 bits (304), Expect = 2.806e-31 Identity = 55/115 (47.83%), Postives = 74/115 (64.35%), Query Frame = 0 Query: 13 FPPDILLEIKNSPGNNQCCDCGSFDTEWASVTYGILICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQVFAMRLGSNFQMQEFFRRQRI-SNTDIRVRYQSKAAGVYRSTLAEAVE 126 P ++ E++ PGNN C DCG+ +WASVTYG ICL CSG HR LGV +SFVRS +DSW+ K++ AMR+G N + +FF + I N I+ +Y S AA +YR + VE Sbjct: 4 MPIEVYNELRQLPGNNVCADCGAARPQWASVTYGTFICLECSGKHRGLGVHISFVRSAQMDSWSEKEIQAMRVGGNQNLNDFFAKYNIPKNATIKQKYNSPAAELYREIIKAKVE 118
BLAST of EWM25072.1 vs. NCBI_GenBank
Match: gi|1134897693|gb|OMJ94854.1| (hypothetical protein SteCoe_1880 [Stentor coeruleus]) HSP 1 Score: 120.553 bits (301), Expect = 6.050e-31 Identity = 53/111 (47.75%), Postives = 75/111 (67.57%), Query Frame = 0 Query: 16 DILLEIKNSPGNNQCCDCGSFDTEWASVTYGILICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQVFAMRLGSNFQMQEFFRRQRISNTDIRVRYQSKAAGVYRSTLAEAVE 126 D+L E+K P NN C +CG D++W+SV GI +CL+C+G HR LGV VSFVRS+S+D+W KQ+ M+LG N ++EFF ++ D V+Y++KAA YR L + E Sbjct: 5 DVLRELKMIPENNCCFECGDQDSDWSSVNNGIFLCLKCAGLHRGLGVHVSFVRSVSMDTWQEKQIKLMQLGGNTALKEFFASYGLNELDASVKYKTKAAEYYREMLKQKAE 115
BLAST of EWM25072.1 vs. NCBI_GenBank
Match: gi|855305384|ref|XP_012895400.1| (uncharacterized protein [Blastocystis hominis] >gi|300175809|emb|CBK21352.2| unnamed protein product [Blastocystis hominis]) HSP 1 Score: 116.701 bits (291), Expect = 6.758e-30 Identity = 54/107 (50.47%), Postives = 72/107 (67.29%), Query Frame = 0 Query: 13 FPPDILLEIKNSPGNNQCCDCGSFDTEWASVTYGILICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQVFAMRLGSNFQMQEFFRRQRISN-TDIRVRYQSKAAGVYR 118 P ++L E++ PGNN C DCG+ +WASV+YG ICL CSG HR LGV +SFVRS+ +DSWT ++ AM++G N ++ FF ISN IR +Y S AA +YR Sbjct: 1 MPNEVLAELRALPGNNVCVDCGASRPQWASVSYGTFICLECSGKHRGLGVHLSFVRSVQMDSWTEDEIKAMQVGGNQSLRSFFEEHGISNDATIREKYSSPAAALYR 107
BLAST of EWM25072.1 vs. NCBI_GenBank
Match: gi|1134895765|gb|OMJ92957.1| (hypothetical protein SteCoe_4176 [Stentor coeruleus]) HSP 1 Score: 116.316 bits (290), Expect = 2.004e-29 Identity = 51/113 (45.13%), Postives = 74/113 (65.49%), Query Frame = 0 Query: 16 DILLEIKNSPGNNQCCDCGSFDTEWASVTYGILICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQVFAMRLGSNFQMQEFFRRQRISNTDIRVRYQSKAAGVYRSTLAEAVEKG 128 +IL E+KN P N C DC + + EW SV GI +C+ C+G HR LGV +SF+RS+SLD+W KQ+ M+LG N ++EFF +++ +I ++Y++KAA YR L E G Sbjct: 9 NILRELKNRPDNCYCFDCENENCEWTSVNNGIFLCINCAGQHRGLGVHISFIRSISLDTWQEKQLNLMKLGGNLALKEFFSTYELNDKEISIKYKTKAAEYYRQMLKVKSEGG 121
BLAST of EWM25072.1 vs. NCBI_GenBank
Match: gi|1072236464|gb|OEU21192.1| (Arf GTPase activating protein, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 112.079 bits (279), Expect = 2.465e-29 Identity = 51/113 (45.13%), Postives = 74/113 (65.49%), Query Frame = 0 Query: 15 PDILLEIKNSPGNNQCCDCGSFDTEWASVTYGILICLRCSGFHRSLGVSVSFVRSLSLDSWTPKQVFAMRLGSNFQMQEFFRRQRIS-NTDIRVRYQSKAAGVYRSTLAEAVE 126 P L +K PGNNQC DCG + +WASV++G + CL CSG HRSLGV +SFVRS+++DSWT KQ+ M+ G N + ++ + + I T ++ +Y+S A +Y+ L VE Sbjct: 6 PADLAVVKAMPGNNQCSDCGQKNPQWASVSFGNIFCLECSGVHRSLGVHISFVRSIAMDSWTEKQLALMKNGGNKKCNDYLQTKGIQPRTPVKAKYESDHAQLYKLILKAKVE 118 The following BLAST results are available for this feature:
BLAST of EWM25072.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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