EWM25117.1, cds5586 (CDS) Nannochloropsis gaditana

Overview
NameEWM25117.1
Unique Namecds5586
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:379211..379399 -
Alignment locationCM002466.1:377686..379077 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25117.1
Productwd repeat-containing protein 74
Orig transcript idgnl|cribi|Naga_100016g4.2926.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:379211..379399 -
CM002466.1supercontigCM002466.1:377686..379077 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0005730nucleolus
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR017986WD40_repeat_dom
IPR015943WD40/YVTN_repeat-like_dom
IPR001680WD40_repeat
Homology
BLAST of EWM25117.1 vs. NCBI_GenBank
Match: gi|585106755|gb|EWM25117.1| (wd repeat-containing protein 74 [Nannochloropsis gaditana])

HSP 1 Score: 1050.43 bits (2715), Expect = 0.000e+0
Identity = 526/526 (100.00%), Postives = 526/526 (100.00%), Query Frame = 0
Query:    1 MRIITGDEGGLLKSIDLEGQRIVVAGRQERARGIRALCWSRGGAMYAAARHDGVVTLWEDNPTVPRLARECKGAVNEDVIGMASTDAHLARKEEEERLVVAHENGKIKVLAPWQSVVTGHKGICIDEWQVKGPLTCMACNFGSTNVVAAGGKERELGLYDVSTGAPVWEARNVAHDKLSLRQPVWVTAIHFLDVETGSEGGGAGRLVAIGTGYKQVRIYDVRAPDRRPVRAMELPEGYRITALASGGVQGATGAGSELVSGDAGGTVYRLDVGKMALLGRMEGPAGSVRGLARHPNPALPFVALAGLDRMARVYDLRRPRKEAFRFYLKQRLTAVLFAKQGRKGSKGIAEEIDEEVRAAKATGSNGWREMEDDVLSLDDEEEEEGEGGDYDGEEEEKAEALRRGRYSDTPERKENGFKIQRVYESEEEVDDGGGMGEDTSDGGDQDEEEEEEDEEEDEEGGEEDDEDKVAFGRRNDGPIHLELNIVGGGDEEDEDRSAEQVSNRVREKGIDKHQRQKLGPTKRPRR 526
            MRIITGDEGGLLKSIDLEGQRIVVAGRQERARGIRALCWSRGGAMYAAARHDGVVTLWEDNPTVPRLARECKGAVNEDVIGMASTDAHLARKEEEERLVVAHENGKIKVLAPWQSVVTGHKGICIDEWQVKGPLTCMACNFGSTNVVAAGGKERELGLYDVSTGAPVWEARNVAHDKLSLRQPVWVTAIHFLDVETGSEGGGAGRLVAIGTGYKQVRIYDVRAPDRRPVRAMELPEGYRITALASGGVQGATGAGSELVSGDAGGTVYRLDVGKMALLGRMEGPAGSVRGLARHPNPALPFVALAGLDRMARVYDLRRPRKEAFRFYLKQRLTAVLFAKQGRKGSKGIAEEIDEEVRAAKATGSNGWREMEDDVLSLDDEEEEEGEGGDYDGEEEEKAEALRRGRYSDTPERKENGFKIQRVYESEEEVDDGGGMGEDTSDGGDQDEEEEEEDEEEDEEGGEEDDEDKVAFGRRNDGPIHLELNIVGGGDEEDEDRSAEQVSNRVREKGIDKHQRQKLGPTKRPRR
Sbjct:    1 MRIITGDEGGLLKSIDLEGQRIVVAGRQERARGIRALCWSRGGAMYAAARHDGVVTLWEDNPTVPRLARECKGAVNEDVIGMASTDAHLARKEEEERLVVAHENGKIKVLAPWQSVVTGHKGICIDEWQVKGPLTCMACNFGSTNVVAAGGKERELGLYDVSTGAPVWEARNVAHDKLSLRQPVWVTAIHFLDVETGSEGGGAGRLVAIGTGYKQVRIYDVRAPDRRPVRAMELPEGYRITALASGGVQGATGAGSELVSGDAGGTVYRLDVGKMALLGRMEGPAGSVRGLARHPNPALPFVALAGLDRMARVYDLRRPRKEAFRFYLKQRLTAVLFAKQGRKGSKGIAEEIDEEVRAAKATGSNGWREMEDDVLSLDDEEEEEGEGGDYDGEEEEKAEALRRGRYSDTPERKENGFKIQRVYESEEEVDDGGGMGEDTSDGGDQDEEEEEEDEEEDEEGGEEDDEDKVAFGRRNDGPIHLELNIVGGGDEEDEDRSAEQVSNRVREKGIDKHQRQKLGPTKRPRR 526          
BLAST of EWM25117.1 vs. NCBI_GenBank
Match: gi|855301412|ref|XP_012894112.1| (uncharacterized protein [Blastocystis hominis] >gi|300120510|emb|CBK20064.2| unnamed protein product [Blastocystis hominis])

HSP 1 Score: 172.17 bits (435), Expect = 2.328e-45
Identity = 121/358 (33.80%), Postives = 183/358 (51.12%), Query Frame = 0
Query:    1 MRIITGDEGGLLKSIDLEGQRIVVAGRQERARGIRALCWSRGGAM----YAAARHDGVVTLWEDNPTVPRLARECKGAVNEDVIGMASTDAHLARKEEEERLVVAHENGKIKVLAPWQSVVTGHKGICIDEWQVKGPLTCMACNFGSTNVVAAGGKERELGLYDVSTGAPVWEARNVAHDKLSLRQPVWVTAIHFLDVETGSEGGGAGRLVAIGTGYKQVRIYDVRAPDRRPVRAMELPEGYRITALASGGVQGATGAGSELVSGDAGGTVYRLDVGKMALLGRMEGPAGSVRGLARHPNPALPFVALAGLDRMARVYDLRRPRKEAFRFYLKQRLTAVLFAKQGRKGSKGIAEEIDE 354
            MRIIT DE GL+K I +E +RI   G Q R   +  + W+          A A  +G V +W+ + TV  + +E  G      I        + R EE+ +++   ++GK+  L  W+          +  + VKGP+  M     +  + A GG+E +L LYD+ T  PV++ARNV +D L LR P+WVT + FL          +G  +A+ TG+  VR+YD RA  RRPV+++E+  G R     +      +   + L +GD  G V R+D+  M L G  +G  GSVR +A H  P +  +A  GLDR+ RV+D+   R++  R YL+Q+L  VL + +G   S    EE  E
Sbjct:    1 MRIITADETGLIKQILIENKRIQRWGTQSRDNSVERMVWAGMSGCEENEVAVALVNGRVQVWDVDKTV--IVKEFSG------IEGIPRGLGVIRNEEDRKVITCTDDGKVN-LYNWKD------AEIVKTFDVKGPIANMHLCPSNNQIFAVGGRENDLALYDIETEEPVFKARNVPNDWLQLRVPIWVTDMKFL------HPKSSGFELAVVTGHHHVRLYDTRA-KRRPVQSVEI--GSRPFTCCT-----VSHDENSLFTGDTIGRVSRIDLRTMQLNGVYKGNTGSVREIALH--PTMEVMATVGLDRVMRVFDV-ATRQQLHRVYLRQKLNCVLVSSEGEVASFTKEEEAPE 326          
BLAST of EWM25117.1 vs. NCBI_GenBank
Match: gi|673036580|ref|XP_008872251.1| (hypothetical protein H310_08327 [Aphanomyces invadans] >gi|574471817|gb|ETV98823.1| hypothetical protein H310_08327 [Aphanomyces invadans])

HSP 1 Score: 170.629 bits (431), Expect = 1.172e-44
Identity = 133/394 (33.76%), Postives = 192/394 (48.73%), Query Frame = 0
Query:    1 MRIITGDEGGLLKSIDLEGQR--IVVAGRQERARGIRALCWSRGGAMYAAARHDGVVTLWEDNPTVP-RLARECKGAVNEDVIGMASTDAHLARKEEEERLVVAHENGKIKVLAPWQSVVTGHKGICIDEWQVKGPLTCMACNFGSTNVVAAGGKERELGLYDVSTGAPVWEARNVAHDKLSLRQPVWVTAIHFLDVETGSEGGGAGRLVAIGTGYKQVRIYDVRAPDRRPVRAMELPEGYRITALASGGVQGATGAGSELVSGDAGGTVYRLDVGKMALLGRMEGPAGSVRGLARHPNPALPFVALAGLDRMARVYDLRRPRKEAFRFYLKQRLTAVLFAKQGRKGSKGIAEEIDEEVRAAKATGSNGWREMEDDVLSLDDEEEEEGEGGDYD 391
            MR+I GDE GL+K++ LE     ++    Q R++  R L WS    +   AR +G V     N   P    RE         +GM           E   +V  +  G+++V+ P       H       + V   +  +  N  ++NV+A GGKER++ ++D+ T   V++A+NV HD L +R PVWV AI FL   + + G  +G  + +GT Y Q+RIYD  A  RRPV      E + IT+L    VQ        ++ GD  G V  +D+     LGR  GP GS+R +A H  P LP+VA  GLDRM  V+ +   RK    +Y KQRL AVLF  +G K +   A    E+V               +D++S DDE++E  EG + D
Sbjct:    1 MRVIVGDETGLVKNVALEAATATMLTGTAQGRSKSARYLAWSDKDVV--VARTNGDVDCVGINGGSPWSFTREGSP------VGMGVV-------AEYGSIVRCNTAGRVEVVHPL------HVKPNPPAFNVGNDIHTLRVNPYASNVIAIGGKERDMNVWDLQTQQAVFKAKNVTHDNLDMRVPVWVKAITFLPPTSAAGGSESGHRLVVGTAYHQIRIYDTSA-KRRPVLETSFGE-HPITSLV---VQ-----DHRVMFGDTAGNVNAIDMRTFKHLGRYHGPVGSIRDMALH--PTLPYVASVGLDRMVHVHHI-EARKAVHTYYAKQRLNAVLFTDEGVKAAPIAAVPAAEDV--------------VEDMVS-DDEDDEAYEGLEID 345          
BLAST of EWM25117.1 vs. NCBI_GenBank
Match: gi|1032152167|gb|OAO15641.1| (WD repeat-containing protein 74 [Blastocystis sp. ATCC 50177/Nand II])

HSP 1 Score: 166.007 bits (419), Expect = 5.515e-43
Identity = 117/345 (33.91%), Postives = 175/345 (50.72%), Query Frame = 0
Query:    1 MRIITGDEGGLLKSIDLEGQRIVVAGRQERARGIRALCWSRGGAM----YAAARHDGVVTLWEDNPTVPRLARECKGAVNEDVIGMASTDAHLARKEEEERLVVAHENGKIKVLAPWQSVVTGHKGICIDEWQVKGPLTCMACNFGSTNVVAAGGKERELGLYDVSTGAPVWEARNVAHDKLSLRQPVWVTAIHFLDVETGSEGGGAGRLVAIGTGYKQVRIYDVRAPDRRPVRAMELPE-GYRITALASGGVQGATGAGSELVSGDAGGTVYRLDVGKMALLGRMEGPAGSVRGLARHPNPALPFVALAGLDRMARVYDLRRPRKEAFRFYLKQRLTAVLFAKQ 340
            MRIITGD+ GL+K I +E +RI   G Q R  G+  + W+               +G V +W+ + T   + +E +G +     GM      + R +E   +V     G +  L  W       +   ID + V GP++ M     +  V A GG+E ++ LYD+     ++  RNV +D L+LR P+WV  + FL     S  G   +L A+ TG+ QVR+YD RA  RRPV++ME+ +  +    +A           S L +GD  G V R+D+  + L G  +G  GSVR +A H  P LP +A  GLDR+ RV+D    R++  R YL+Q+L AVLF  +
Sbjct:    1 MRIITGDDTGLIKQILIENKRIQRWGTQSRENGVECMAWAGEEGNEENELGVVLRNGNVQVWDVDQT--EIVKEYRG-IEGTACGMG-----ILRNQEMRHIVSCTTEGSV-YLFKWD------EEEAIDSFDVNGPVSKMRLCPYNNKVFAVGGRENDIALYDIEQKDAIFRGRNVPNDFLNLRVPIWVADMQFL-----SSDGSTHKL-AVVTGHHQVRLYDTRA-QRRPVQSMEIGDRPFTCCRVARD--------DSVLYTGDTTGRVSRIDLRTLRLSGTYKGNTGSVRDIAIH--PTLPRLATVGLDRIMRVFD-SESRQQLHRVYLRQQLNAVLFTSE 312          
BLAST of EWM25117.1 vs. NCBI_GenBank
Match: gi|1032153676|gb|OAO16987.1| (WD repeat-containing protein [Blastocystis sp. ATCC 50177/Nand II])

HSP 1 Score: 166.007 bits (419), Expect = 9.203e-43
Identity = 115/345 (33.33%), Postives = 174/345 (50.43%), Query Frame = 0
Query:    1 MRIITGDEGGLLKSIDLEGQRIVVAGRQERARGIRALCWSRGGAM----YAAARHDGVVTLWEDNPTVPRLARECKGAVNEDVIGMASTDAHLARKEEEERLVVAHENGKIKVLAPWQSVVTGHKGICIDEWQVKGPLTCMACNFGSTNVVAAGGKERELGLYDVSTGAPVWEARNVAHDKLSLRQPVWVTAIHFLDVETGSEGGGAGRLVAIGTGYKQVRIYDVRAPDRRPVRAMELPE-GYRITALASGGVQGATGAGSELVSGDAGGTVYRLDVGKMALLGRMEGPAGSVRGLARHPNPALPFVALAGLDRMARVYDLRRPRKEAFRFYLKQRLTAVLFAKQ 340
            MRIITGD+ GL+K I +E +RI   G Q R  G+  + W+               +G V +W+ + T   + +E  G +     GM      + R +E   +V     G +  L  W       +   ID + V GP++ M     +  V A GG+E ++ LYD+     ++  RNV +D L+LR P+WV  + FL     S  G   +L A+ TG+ Q+R+YD RA  RRPV+++E+ +  +    +A           S L +GD  G V R+D+  + L G  +G  GSVR +A H  P LP +A  GLDR+ RV+D    R++  R YL+Q+L AVLF  +
Sbjct:    1 MRIITGDDTGLIKQILIENKRIQRWGTQSRENGVECMAWAGEEGNEENELGVVLRNGHVQVWDVDQT--EIVKEYTG-IEGTACGMG-----ILRNQEMRHIVSCTTEGSV-YLFKWD------EEEAIDSFDVNGPVSKMRLCPYNNKVFAVGGRENDIALYDIEQKDAIFRGRNVPNDFLNLRVPIWVADMQFL-----SSDGSTHKL-AVVTGHHQIRLYDTRAQ-RRPVQSVEIGDRPFTCCRVARD--------DSVLYTGDTTGRVSRIDLRTLRLSGTYKGNTGSVRDIAIH--PTLPRLATVGLDRIMRVFD-SESRQQLHRVYLRQQLNAVLFTSE 312          
BLAST of EWM25117.1 vs. NCBI_GenBank
Match: gi|299470925|emb|CBN79909.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 167.162 bits (422), Expect = 4.657e-42
Identity = 140/375 (37.33%), Postives = 193/375 (51.47%), Query Frame = 0
Query:    1 MRIITGDEGGLLKSIDLE-GQRIVV-AGRQERARGIRALCWSRGGAMYAAARH---------------DGVVTLWEDNPT------------VPRLARECKGAVNEDVIGMASTDAHLARKEEEERLVVAHENGKIKV--LAPWQSVVTGHKGICIDE-----WQVKGPLTCMACNF--GSTNVVAAGGKERELGLYDVSTGAPVWEARNVAHDKLSLRQPVWVTAIHFLDVETGSEGGGAGRLVAIGTGYKQVRIYDVRAPDRRPVRAMELPEGYRITALASGGVQGATGAGSELVSGDAGGTVYRLDVGKMALLGRMEGPAGSVRGLARHPNPALPFVALAGLDRMARVYDLRRPRKEAFRFYLKQRLTAVLF 337
            MRIIT DE GL+K + LE G+ + V AG Q RA  +RA+C+    A  AA+RH                G V  W+ + +                A EC  A     + +A      +   E  R++  +  G+++V   AP         G   DE       ++GP++    +   GS   +AAGGKE +L  +D+ TG   W+A+NV HD L +RQPVW+T++  L   T   GGG  ++VA GT ++QVR+YD RA  +RP  +++  E + +T +A          G E+V  D  G V  LD+ KM    R EGPAGSVRGLA HP   LP +A  GLDRMARVY     R++ F+ YLKQRL AVLF
Sbjct:    1 MRIITADETGLVKVVRLESGECLAVSAGEQARANAVRAVCFDH--AAPAASRHRASDDFFARIHVARAAGAVETWDVSQSERDGQTGGCALSARGTAVECAAAP----VALACLPPASSSSSESSRVLTCNGEGEVQVSRAAP--------DGRSNDEAERTTLSIRGPVSAAVADGDGGSGLALAAGGKENDLKTWDLGTGKCTWKAKNVPHDFLDMRQPVWITSLCPLAAAT-GGGGGLQQMVA-GTAHRQVRLYDARA-QKRPTHSVDADE-HGVTTMA------VAPDGREVVVADTAGLVRVLDLRKMKWGRRFEGPAGSVRGLAFHPT--LPVLACVGLDRMARVYGYHS-REQKFQVYLKQRLNAVLF 348          
BLAST of EWM25117.1 vs. NCBI_GenBank
Match: gi|551663293|ref|XP_005834411.1| (hypothetical protein GUITHDRAFT_106874 [Guillardia theta CCMP2712] >gi|428178556|gb|EKX47431.1| hypothetical protein GUITHDRAFT_106874 [Guillardia theta CCMP2712])

HSP 1 Score: 164.081 bits (414), Expect = 5.458e-42
Identity = 123/365 (33.70%), Postives = 178/365 (48.77%), Query Frame = 0
Query:    1 MRIITGDEGGLLK-SIDLEGQRIVVAGRQERARGIRALCWSRGGA--MYAAARHDGVVTLWEDNPTVP----RLARECKGAVNEDVIGMASTDAHLARKEEEERLVVAHENGKIKVLAPWQSVVTGHKGICIDEWQVKGPLTCMACNFGSTNVVAAGGKERELGLYDVSTGAPVWEARNVAHDKLSLRQPVWVTAIHFLDVETGSEGGGAGRLVAIGTGYKQVRIYDVRAPDRRPVRAMEL---PEGYRITALASGGVQGATGAGSELVSGDAGGTVYRLDVGKMALLGRMEGPAGSVRGLARHPNPALPFVALAGLDRMARVYDLRRPRKEAFRFYLKQRLTAVLFAKQGRKGSKGIAEEIDEE 355
            ++IITGDE GL+K S   E   I   G Q+R      +CWSR  +   +   R DGVV LW+   +V      L RE                  + R+ +  +LV  +E GK+ +    QS+    + + +    +KGP             +A GG+E EL +YD+ T    W+A+NV  +KL LR PVWVT + +L  E  ++       + I T Y Q+R+YD+RA  RRPV        P+  R+ A         +   S +V+GDA G + ++D+ +  + G+ +  AGSVR +  H  P+LP VA A LDR  RVYD       + R Y KQRL  +LFA +G    K   EE DE+
Sbjct:    6 LQIITGDETGLIKISAPEESAVIAKFGEQKREHAAECMCWSRDASELSFFVGRADGVVKLWDAQASVELANFELGREA---------CTKPRSVFMLRESDSTKLVTVNEEGKVLL----QSL---DQTLRVTALSIKGP-------------IAYGGQENELQVYDLQTQTVSWKAKNVPENKLRLRLPVWVTDLQYLSSEDENK-------LVICTAYGQIRLYDIRA-QRRPVINASCSPEPDQVRLNAGTRFTCMALSPDESYVVAGDALGGLRKIDLKQGKVCGKFKHIAGSVRAVDFH--PSLPLVAAASLDRFVRVYDANTTMMTS-RIYAKQRLNCLLFAGEGETKPKK-EEESDED 329          
BLAST of EWM25117.1 vs. NCBI_GenBank
Match: gi|698807894|ref|XP_009836976.1| (hypothetical protein H257_11677 [Aphanomyces astaci] >gi|574108041|gb|ETV73550.1| hypothetical protein H257_11677 [Aphanomyces astaci])

HSP 1 Score: 162.155 bits (409), Expect = 2.261e-41
Identity = 123/365 (33.70%), Postives = 174/365 (47.67%), Query Frame = 0
Query:    1 MRIITGDEGGLLKSIDLEGQR-IVVAGR-QERARGIRALCWSRGGAMYAAARHDGVVTLWEDNPTVP-RLARECKGAVNEDVIGMASTDAHLARKEEEERLVVAHENGKIKVLAPWQSVVTGHKGICIDEWQVKGPLTCMACNFGSTNVVAAGGKERELGLYDVSTGAPVWEARNVAHDKLSLRQPVWVTAIHFLDVETGSEGGGAGRLVAIGTGYKQVRIYDVRAPDRRPVRAMELPEGYRITALASGGVQGATGAGSELVSGDAGGTVYRLDVGKMALLGRMEGPAGSVRGLARHPNPALPFVALAGLDRMARVYDLRRPRKEAFRFYLKQRLTAVLFAKQGRKGS------KGIAEEIDEEV 356
            MR+I  DE GL+K++ +E     V+AG  Q R+   R L WS    +   AR +G V     +   P    RE         +GM           E   +V  +  G ++V+ P       H       + V   +  +  N  ++NV+  GGKER+  L+D+ T   +++A+N+ HD L +R PVWV A+ FL   T + GG  G  + +GT Y Q+RIYD  A  RRPV           T+     +      G+ ++ GD  G V  +D+     LGR  GP GS+R LA HP   LP+VA  GLDRM  V+ +   RK    +Y KQRL AVLF  +G K +      K  AEE D+ V
Sbjct:    1 MRVIIADETGLVKNVAVEAATATVLAGTAQSRSTSARYLAWSEKDVV--VARTNGDVDCVGVHGGSPWSFTREGSP------VGMGVI-------AEYGSIVRCNTAGHVEVVHPL------HVKPNPPSFNVGNDIQTLRVNPFASNVIGIGGKERDANLWDLQTQKAIFKAKNITHDNLDMRVPVWVKAMTFLP-PTSAAGGSEGHRLVVGTAYHQIRIYDTSA-KRRPVSE---------TSFGDLPITAVLVQGNRVIFGDTAGNVNAIDMRTFKHLGRYHGPVGSIRDLALHPT--LPYVASVGLDRMVHVHHVET-RKAVHTYYAKQRLNAVLFTDEGIKAAPVAPVVKAEAEENDDVV 330          
BLAST of EWM25117.1 vs. NCBI_GenBank
Match: gi|675198821|ref|XP_008908295.1| (hypothetical protein PPTG_13677 [Phytophthora parasitica INRA-310] >gi|568091505|gb|ETN06326.1| hypothetical protein PPTG_13677 [Phytophthora parasitica INRA-310] >gi|970657874|gb|KUF95706.1| hypothetical protein AM588_10006424 [Phytophthora nicotianae] >gi|970663685|gb|KUG00794.1| WD repeat-containing protein 74 [Phytophthora nicotianae])

HSP 1 Score: 159.844 bits (403), Expect = 2.568e-40
Identity = 127/373 (34.05%), Postives = 174/373 (46.65%), Query Frame = 0
Query:    1 MRIITGDEGGLLKSIDLEG--QRIVVAGRQE--RARGIRALCWS---RGGAMY----AAARHDGVVTLWEDNPTVPRLARECKGAVNEDVIGMASTDAHLARKEEEERLVVAHENGKIKVLAPWQSVVTGHKGICIDE-----------------WQVKGPLTCMACNFGSTNVVAAGGKERELGLYDVSTGAPVWEARNVAHDKLSLRQPVWVTAIHFLDVETGSEGGGAGRLVAIGTGYKQVRIYDVRAPDRRPVRAMELPEGYRITALASGGVQGATGAGSE--LVSGDAGGTVYRLDVGKMALLGRMEGPAGSVRGLARHPNPALPFVALAGLDRMARVYDLRRPRKEAFRFYLKQRLTAVLFAKQGRK 343
            MR++ GDE GLLKSI+LE   QRI+ +  Q   R+RGI+ LCW    R  A Y      AR DGVV  +E +       +    A   D    AS       KE+ +   V      + V+  + SVV      C D                  + V G L  M     +  V+  GGKE +L L+ + T   ++ A+NV HDKL +R PVWV  + FL     + G   G  V +GTG++ VRIYD     RRPV+ ++              +Q    +  E  +  GD  G +  LD+  +  +GR  GP GS+R +A H  P LP++A  GLDRM  V+D+   RK     Y KQRL +VLF   G K
Sbjct:    1 MRVLVGDETGLLKSIELEKNEQRILSSREQPQARSRGIQRLCWYADERDAADYQRNVVLARADGVVESYEASH-----GKSLSAAKEPDWSWPASD------KEQSKTRCVG-----LDVIRKFGSVVQ-----CTDTGDVVVRSTLEDAGKPATFNVDGDLNMMRLEPATQTVIGVGGKEHDLNLWSLETQQVLFRAKNVTHDKLDMRVPVWVKDLRFL----STPGNSNGHRVIVGTGHRHVRIYDSNT-KRRPVQQLD--------NFGENPIQSLCVSPDETRVYVGDTAGNLDILDLRTLKHMGRCTGPVGSIRDIACH--PTLPYIAAVGLDRMVHVFDV-NTRKYRHTIYAKQRLNSVLFCADGLK 336          
BLAST of EWM25117.1 vs. NCBI_GenBank
Match: gi|567957344|gb|ETK82947.1| (hypothetical protein L915_11745 [Phytophthora parasitica] >gi|567985992|gb|ETL36323.1| hypothetical protein L916_11670 [Phytophthora parasitica] >gi|570947377|gb|ETP12634.1| hypothetical protein F441_11997 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 159.844 bits (403), Expect = 2.568e-40
Identity = 127/373 (34.05%), Postives = 174/373 (46.65%), Query Frame = 0
Query:    1 MRIITGDEGGLLKSIDLEG--QRIVVAGRQE--RARGIRALCWS---RGGAMY----AAARHDGVVTLWEDNPTVPRLARECKGAVNEDVIGMASTDAHLARKEEEERLVVAHENGKIKVLAPWQSVVTGHKGICIDE-----------------WQVKGPLTCMACNFGSTNVVAAGGKERELGLYDVSTGAPVWEARNVAHDKLSLRQPVWVTAIHFLDVETGSEGGGAGRLVAIGTGYKQVRIYDVRAPDRRPVRAMELPEGYRITALASGGVQGATGAGSE--LVSGDAGGTVYRLDVGKMALLGRMEGPAGSVRGLARHPNPALPFVALAGLDRMARVYDLRRPRKEAFRFYLKQRLTAVLFAKQGRK 343
            MR++ GDE GLLKSI+LE   QRI+ +  Q   R+RGI+ LCW    R  A Y      AR DGVV  +E +       +    A   D    AS       KE+ +   V      + V+  + SVV      C D                  + V G L  M     +  V+  GGKE +L L+ + T   ++ A+NV HDKL +R PVWV  + FL     + G   G  V +GTG++ VRIYD     RRPV+ ++              +Q    +  E  +  GD  G +  LD+  +  +GR  GP GS+R +A H  P LP++A  GLDRM  V+D+   RK     Y KQRL +VLF   G K
Sbjct:    1 MRVLVGDETGLLKSIELEKNEQRILSSREQPQARSRGIQRLCWYADERDAADYQRNVVLARADGVVESYEASH-----GKSLSAAKEPDWSWPASD------KEQSKTRCVG-----LDVIRKFGSVVQ-----CTDTGDVVVRSTLEDAGKPATFNVDGDLNMMRLEPATQTVIGVGGKEHDLNLWSLETQQVLFRAKNVTHDKLDMRVPVWVKDLRFL----STPGNSNGHRVIVGTGHRHVRIYDSNT-KRRPVQQLD--------NFGENPIQSLCVSPDETRVYVGDTAGNLDILDLRTLKHMGRCTGPVGSIRDIACH--PTLPYIAAVGLDRMVHVFDV-NTRKYRHTIYAKQRLNSVLFCADGLK 336          
The following BLAST results are available for this feature:
BLAST of EWM25117.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106755|gb|EWM25117.1|0.000e+0100.00wd repeat-containing protein 74 [Nannochloropsis g... [more]
gi|855301412|ref|XP_012894112.1|2.328e-4533.80uncharacterized protein [Blastocystis hominis] >gi... [more]
gi|673036580|ref|XP_008872251.1|1.172e-4433.76hypothetical protein H310_08327 [Aphanomyces invad... [more]
gi|1032152167|gb|OAO15641.1|5.515e-4333.91WD repeat-containing protein 74 [Blastocystis sp. ... [more]
gi|1032153676|gb|OAO16987.1|9.203e-4333.33WD repeat-containing protein [Blastocystis sp. ATC... [more]
gi|299470925|emb|CBN79909.1|4.657e-4237.33conserved unknown protein [Ectocarpus siliculosus][more]
gi|551663293|ref|XP_005834411.1|5.458e-4233.70hypothetical protein GUITHDRAFT_106874 [Guillardia... [more]
gi|698807894|ref|XP_009836976.1|2.261e-4133.70hypothetical protein H257_11677 [Aphanomyces astac... [more]
gi|675198821|ref|XP_008908295.1|2.568e-4034.05hypothetical protein PPTG_13677 [Phytophthora para... [more]
gi|567957344|gb|ETK82947.1|2.568e-4034.05hypothetical protein L915_11745 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5600rna5600Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications