EWM25155.1, cds5585 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25155.1 vs. NCBI_GenBank
Match: gi|585106793|gb|EWM25155.1| (gram domain-containing protein 1a [Nannochloropsis gaditana]) HSP 1 Score: 875.93 bits (2262), Expect = 0.000e+0 Identity = 430/430 (100.00%), Postives = 430/430 (100.00%), Query Frame = 0
Query: 1 MTQESSPHSASAPSTFSSPSLSTATTESVGGRRRSRDLMIDEDTPMSSSASAPSLPPANSSLSPHHSSEQQHQQPSMVRRSSGSSYSKRESFVRTPEDSFRDEIVRQIFGENLGCIRDDASCAVESKILLHGRIYITDKFVCFYSNFFGFEKKIKIPFSQVRTLSKGNTALLIPNCIIIQTHGKEYCFRSFWDRDECFWQMARCFRAYHRMQSVPREAVMECRSLDRTGRIENSTATVVEDGGGPMAGTGRPQTASSMSASYSQQQPQQFRRQQSGHRKGPQKQEEHREAGAEDRRGSHPPLPPEPRSQGPSQQPSVSTHGEGGTGPPYGISGEPVGGEFLPARAPSDETGGFPQHPDTPGPGPTLAAPSSPDLSLPPPLDVHPVDAYEEAGEGERRDVSRGATSPSPLAPGGGSRWVPARTTACGIWTS 430
MTQESSPHSASAPSTFSSPSLSTATTESVGGRRRSRDLMIDEDTPMSSSASAPSLPPANSSLSPHHSSEQQHQQPSMVRRSSGSSYSKRESFVRTPEDSFRDEIVRQIFGENLGCIRDDASCAVESKILLHGRIYITDKFVCFYSNFFGFEKKIKIPFSQVRTLSKGNTALLIPNCIIIQTHGKEYCFRSFWDRDECFWQMARCFRAYHRMQSVPREAVMECRSLDRTGRIENSTATVVEDGGGPMAGTGRPQTASSMSASYSQQQPQQFRRQQSGHRKGPQKQEEHREAGAEDRRGSHPPLPPEPRSQGPSQQPSVSTHGEGGTGPPYGISGEPVGGEFLPARAPSDETGGFPQHPDTPGPGPTLAAPSSPDLSLPPPLDVHPVDAYEEAGEGERRDVSRGATSPSPLAPGGGSRWVPARTTACGIWTS
Sbjct: 1 MTQESSPHSASAPSTFSSPSLSTATTESVGGRRRSRDLMIDEDTPMSSSASAPSLPPANSSLSPHHSSEQQHQQPSMVRRSSGSSYSKRESFVRTPEDSFRDEIVRQIFGENLGCIRDDASCAVESKILLHGRIYITDKFVCFYSNFFGFEKKIKIPFSQVRTLSKGNTALLIPNCIIIQTHGKEYCFRSFWDRDECFWQMARCFRAYHRMQSVPREAVMECRSLDRTGRIENSTATVVEDGGGPMAGTGRPQTASSMSASYSQQQPQQFRRQQSGHRKGPQKQEEHREAGAEDRRGSHPPLPPEPRSQGPSQQPSVSTHGEGGTGPPYGISGEPVGGEFLPARAPSDETGGFPQHPDTPGPGPTLAAPSSPDLSLPPPLDVHPVDAYEEAGEGERRDVSRGATSPSPLAPGGGSRWVPARTTACGIWTS 430
BLAST of EWM25155.1 vs. NCBI_GenBank
Match: gi|298706349|emb|CBJ29358.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 144.436 bits (363), Expect = 1.043e-33 Identity = 64/105 (60.95%), Postives = 80/105 (76.19%), Query Frame = 0
Query: 100 FRDEIVRQIFGENLGCIRDDASCAVESKILLHGRIYITDKFVCFYSNFFGFEKKIKIPFSQVRTLSKGNTALLIPNCIIIQTHGKEYCFRSFWDRDECFWQMARC 204
+R++IVR IFGE +G +D SCAVES+ILLHGR+Y+T+ FVCFYSN FGFEK IKIPF +R ++K TAL IPN I I T KEY FRSFWDR++ F + +C
Sbjct: 18 YREDIVRSIFGE-VGKPVEDFSCAVESRILLHGRMYVTNTFVCFYSNLFGFEKIIKIPFCHMRCITKEKTALFIPNAIAIITSKKEYIFRSFWDREDAFKTLKQC 121
BLAST of EWM25155.1 vs. NCBI_GenBank
Match: gi|676382923|ref|XP_009034740.1| (hypothetical protein AURANDRAFT_3287, partial [Aureococcus anophagefferens] >gi|323454247|gb|EGB10117.1| hypothetical protein AURANDRAFT_3287, partial [Aureococcus anophagefferens]) HSP 1 Score: 127.487 bits (319), Expect = 1.774e-32 Identity = 52/80 (65.00%), Postives = 65/80 (81.25%), Query Frame = 0
Query: 119 DASCAVESKILLHGRIYITDKFVCFYSNFFGFEKKIKIPFSQVRTLSKGNTALLIPNCIIIQTHGKEYCFRSFWDRDECF 198
D SCA+E KILLHGR+Y+T++F+CFYSN FGFEKKIKIP+S + ++K TA+ IPN I + T KEY FRSFWDRD+CF
Sbjct: 2 DFSCAIERKILLHGRLYVTERFICFYSNLFGFEKKIKIPYSHITCITKEYTAVFIPNAIAVITARKEYVFRSFWDRDDCF 81
BLAST of EWM25155.1 vs. NCBI_GenBank
Match: gi|299116574|emb|CBN74762.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 116.316 bits (290), Expect = 3.564e-24 Identity = 49/105 (46.67%), Postives = 76/105 (72.38%), Query Frame = 0
Query: 95 TPED-SFRDEIVRQIFGENLGCIRDDASCAVESKILLHGRIYITDKFVCFYSNFFGFEKKIKIPFSQVRTLSKGNTALLIPNCIIIQTH-GKEYCFRSFWDRDEC 197
T ED + R++I QIFG ++G + D SCA + K+++HGR+Y+T++ +CFY+NFFG E K+ + V SKGN+A+ IPN +++Q GK++ FR+FW+RDEC
Sbjct: 55 TAEDLALREDICYQIFG-DVGPLIRDFSCAWDHKVVMHGRMYVTERRLCFYANFFGLEAKMSLRHEDVARCSKGNSAIFIPNVVVVQDKSGKDFVFRAFWERDEC 158
BLAST of EWM25155.1 vs. NCBI_GenBank
Match: gi|1176328975|ref|XP_020667526.1| (GRAM domain-containing protein 1A isoform X2 [Pogona vitticeps]) HSP 1 Score: 96.6709 bits (239), Expect = 8.789e-18 Identity = 92/313 (29.39%), Postives = 134/313 (42.81%), Query Frame = 0
Query: 101 RDEIVRQIF-----GENLGCIRDDASCAVESKILLHGRIYITDKFVCFYSNFFGFEKKIKIPFSQVRTLSKGNTALLIPNCIIIQTHGKEYCFRSFWDRDECFWQMARCFR-AYHRMQSVPRE---AVMECR--SLDRTGRIENSTATVVE-DGGGPMAGTGRPQTASSMSASYS-----QQQPQQFRRQQSGHRKGPQKQEEHREAGAEDRRGSHPPLPPEPRSQGPSQQPSVSTHGEGGT----------GPPYG-ISGEPVGGEFLPARAPSDETGGFPQHPDTPGPGPTLAAPSSPDLSLPP-PLDVHP 384
R+E R+IF E L D SCA++ ILL GR+Y+++ ++CFYSN F +E I I V+ + K TA LIPN I I T +++ F SF RD CF + R ++ A Q PRE V +C L T ++ + V E +G G G S +++ S P +R+ S + + AED P SQ + S+H GPP + GEP+ E LP + + + +P P T+ +P P+L L P PL P
Sbjct: 103 RNEDFRRIFKGLPEAERLLV---DYSCALQRDILLQGRLYLSENWICFYSNIFRWETTISIQLKDVKCIKKEKTAKLIPNAIQICTETEKHFFTSFGARDRCFMLIFRLWQNALLEKQLSPRELWHIVHQCYGSELGLTSEDDDYVSPVDEINGLGTSKEIGDVIDLSDLTSRCSADLKLDTSPLLDKREASQSITSLASSSDGTTSLAED-----------PEENTDSQVDASSSHTVTSATEPPQDNVPRGPPLSPLEGEPLPSEELPTDMSNSSSSTQDEGEGSPDPALTVPSPPLPNLGLEPRPLAAQP 401
BLAST of EWM25155.1 vs. NCBI_GenBank
Match: gi|1176328973|ref|XP_020667525.1| (GRAM domain-containing protein 1A isoform X1 [Pogona vitticeps]) HSP 1 Score: 96.6709 bits (239), Expect = 1.001e-17 Identity = 92/313 (29.39%), Postives = 134/313 (42.81%), Query Frame = 0
Query: 101 RDEIVRQIF-----GENLGCIRDDASCAVESKILLHGRIYITDKFVCFYSNFFGFEKKIKIPFSQVRTLSKGNTALLIPNCIIIQTHGKEYCFRSFWDRDECFWQMARCFR-AYHRMQSVPRE---AVMECR--SLDRTGRIENSTATVVE-DGGGPMAGTGRPQTASSMSASYS-----QQQPQQFRRQQSGHRKGPQKQEEHREAGAEDRRGSHPPLPPEPRSQGPSQQPSVSTHGEGGT----------GPPYG-ISGEPVGGEFLPARAPSDETGGFPQHPDTPGPGPTLAAPSSPDLSLPP-PLDVHP 384
R+E R+IF E L D SCA++ ILL GR+Y+++ ++CFYSN F +E I I V+ + K TA LIPN I I T +++ F SF RD CF + R ++ A Q PRE V +C L T ++ + V E +G G G S +++ S P +R+ S + + AED P SQ + S+H GPP + GEP+ E LP + + + +P P T+ +P P+L L P PL P
Sbjct: 103 RNEDFRRIFKGLPEAERLLV---DYSCALQRDILLQGRLYLSENWICFYSNIFRWETTISIQLKDVKCIKKEKTAKLIPNAIQICTETEKHFFTSFGARDRCFMLIFRLWQNALLEKQLSPRELWHIVHQCYGSELGLTSEDDDYVSPVDEINGLGTSKEIGDVIDLSDLTSRCSADLKLDTSPLLDKREASQSITSLASSSDGTTSLAED-----------PEENTDSQVDASSSHTVTSATEPPQDNVPRGPPLSPLEGEPLPSEELPTDMSNSSSSTQDEGEGSPDPALTVPSPPLPNLGLEPRPLAAQP 401
BLAST of EWM25155.1 vs. NCBI_GenBank
Match: gi|1176328983|ref|XP_020667530.1| (GRAM domain-containing protein 1A isoform X6 [Pogona vitticeps] >gi|1176328985|ref|XP_020667532.1| GRAM domain-containing protein 1A isoform X6 [Pogona vitticeps]) HSP 1 Score: 95.9005 bits (237), Expect = 1.566e-17 Identity = 92/313 (29.39%), Postives = 134/313 (42.81%), Query Frame = 0
Query: 101 RDEIVRQIF-----GENLGCIRDDASCAVESKILLHGRIYITDKFVCFYSNFFGFEKKIKIPFSQVRTLSKGNTALLIPNCIIIQTHGKEYCFRSFWDRDECFWQMARCFR-AYHRMQSVPRE---AVMECR--SLDRTGRIENSTATVVE-DGGGPMAGTGRPQTASSMSASYS-----QQQPQQFRRQQSGHRKGPQKQEEHREAGAEDRRGSHPPLPPEPRSQGPSQQPSVSTHGEGGT----------GPPYG-ISGEPVGGEFLPARAPSDETGGFPQHPDTPGPGPTLAAPSSPDLSLPP-PLDVHP 384
R+E R+IF E L D SCA++ ILL GR+Y+++ ++CFYSN F +E I I V+ + K TA LIPN I I T +++ F SF RD CF + R ++ A Q PRE V +C L T ++ + V E +G G G S +++ S P +R+ S + + AED P SQ + S+H GPP + GEP+ E LP + + + +P P T+ +P P+L L P PL P
Sbjct: 15 RNEDFRRIFKGLPEAERLLV---DYSCALQRDILLQGRLYLSENWICFYSNIFRWETTISIQLKDVKCIKKEKTAKLIPNAIQICTETEKHFFTSFGARDRCFMLIFRLWQNALLEKQLSPRELWHIVHQCYGSELGLTSEDDDYVSPVDEINGLGTSKEIGDVIDLSDLTSRCSADLKLDTSPLLDKREASQSITSLASSSDGTTSLAED-----------PEENTDSQVDASSSHTVTSATEPPQDNVPRGPPLSPLEGEPLPSEELPTDMSNSSSSTQDEGEGSPDPALTVPSPPLPNLGLEPRPLAAQP 313
BLAST of EWM25155.1 vs. NCBI_GenBank
Match: gi|1176328987|ref|XP_020667533.1| (GRAM domain-containing protein 1A isoform X7 [Pogona vitticeps] >gi|1176328989|ref|XP_020667534.1| GRAM domain-containing protein 1A isoform X7 [Pogona vitticeps]) HSP 1 Score: 95.5153 bits (236), Expect = 1.831e-17 Identity = 92/313 (29.39%), Postives = 134/313 (42.81%), Query Frame = 0
Query: 101 RDEIVRQIF-----GENLGCIRDDASCAVESKILLHGRIYITDKFVCFYSNFFGFEKKIKIPFSQVRTLSKGNTALLIPNCIIIQTHGKEYCFRSFWDRDECFWQMARCFR-AYHRMQSVPRE---AVMECR--SLDRTGRIENSTATVVE-DGGGPMAGTGRPQTASSMSASYS-----QQQPQQFRRQQSGHRKGPQKQEEHREAGAEDRRGSHPPLPPEPRSQGPSQQPSVSTHGEGGT----------GPPYG-ISGEPVGGEFLPARAPSDETGGFPQHPDTPGPGPTLAAPSSPDLSLPP-PLDVHP 384
R+E R+IF E L D SCA++ ILL GR+Y+++ ++CFYSN F +E I I V+ + K TA LIPN I I T +++ F SF RD CF + R ++ A Q PRE V +C L T ++ + V E +G G G S +++ S P +R+ S + + AED P SQ + S+H GPP + GEP+ E LP + + + +P P T+ +P P+L L P PL P
Sbjct: 9 RNEDFRRIFKGLPEAERLLV---DYSCALQRDILLQGRLYLSENWICFYSNIFRWETTISIQLKDVKCIKKEKTAKLIPNAIQICTETEKHFFTSFGARDRCFMLIFRLWQNALLEKQLSPRELWHIVHQCYGSELGLTSEDDDYVSPVDEINGLGTSKEIGDVIDLSDLTSRCSADLKLDTSPLLDKREASQSITSLASSSDGTTSLAED-----------PEENTDSQVDASSSHTVTSATEPPQDNVPRGPPLSPLEGEPLPSEELPTDMSNSSSSTQDEGEGSPDPALTVPSPPLPNLGLEPRPLAAQP 307
BLAST of EWM25155.1 vs. NCBI_GenBank
Match: gi|1176328981|ref|XP_020667529.1| (GRAM domain-containing protein 1A isoform X5 [Pogona vitticeps]) HSP 1 Score: 94.7449 bits (234), Expect = 3.628e-17 Identity = 85/290 (29.31%), Postives = 125/290 (43.10%), Query Frame = 0
Query: 119 DASCAVESKILLHGRIYITDKFVCFYSNFFGFEKKIKIPFSQVRTLSKGNTALLIPNCIIIQTHGKEYCFRSFWDRDECFWQMARCFR-AYHRMQSVPRE---AVMECR--SLDRTGRIENSTATVVE-DGGGPMAGTGRPQTASSMSASYS-----QQQPQQFRRQQSGHRKGPQKQEEHREAGAEDRRGSHPPLPPEPRSQGPSQQPSVSTHGEGGT----------GPPYG-ISGEPVGGEFLPARAPSDETGGFPQHPDTPGPGPTLAAPSSPDLSLPP-PLDVHP 384
D SCA++ ILL GR+Y+++ ++CFYSN F +E I I V+ + K TA LIPN I I T +++ F SF RD CF + R ++ A Q PRE V +C L T ++ + V E +G G G S +++ S P +R+ S + + AED P SQ + S+H GPP + GEP+ E LP + + + +P P T+ +P P+L L P PL P
Sbjct: 48 DYSCALQRDILLQGRLYLSENWICFYSNIFRWETTISIQLKDVKCIKKEKTAKLIPNAIQICTETEKHFFTSFGARDRCFMLIFRLWQNALLEKQLSPRELWHIVHQCYGSELGLTSEDDDYVSPVDEINGLGTSKEIGDVIDLSDLTSRCSADLKLDTSPLLDKREASQSITSLASSSDGTTSLAED-----------PEENTDSQVDASSSHTVTSATEPPQDNVPRGPPLSPLEGEPLPSEELPTDMSNSSSSTQDEGEGSPDPALTVPSPPLPNLGLEPRPLAAQP 326
BLAST of EWM25155.1 vs. NCBI_GenBank
Match: gi|931605917|ref|XP_008967472.2| (PREDICTED: GRAM domain-containing protein 1A isoform X3 [Pan paniscus]) HSP 1 Score: 93.9745 bits (232), Expect = 7.229e-17 Identity = 65/201 (32.34%), Postives = 102/201 (50.75%), Query Frame = 0
Query: 80 RSSGSSYSKRESFVRTPEDSFRDEIVRQIF-----GENLGCIRDDASCAVESKILLHGRIYITDKFVCFYSNFFGFEKKIKIPFSQVRTLSKGNTALLIPNCIIIQTHGKEYCFRSFWDRDECFWQMARCFRAYHRMQSV-PRE---AVMECR--SLDRTGRIENSTATVVEDGGGPMAGTGRPQTASSMSASYSQQQPQQ 269
+S GS R S + +P R+E R++F E L D SCA++ +ILL GR+Y+++ ++CFYSN F +E I I +V L K TA LIPN I I T +++ F SF RD CF + R ++ +++ PRE V +C L T E+ + + +G G G S +++S + + Q+
Sbjct: 180 QSLGSRNFIRNSKMLSPTYKQRNEDFRKLFSKLPEAERLIV---DYSCALQREILLQGRLYLSENWICFYSNIFRWETTISIQLKEVTCLKKEKTAKLIPNAIQICTESEKHFFTSFGARDRCFLLIFRLWQNALLEKTLSPRELWHLVHQCYGSELGLTSEDEDYVSPLQLNGLGTPKEVGDVIALSDITSSGAADRSQE 377 The following BLAST results are available for this feature:
BLAST of EWM25155.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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