EWM25109.1, cds5577 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25109.1 vs. NCBI_GenBank
Match: gi|585106747|gb|EWM25109.1| (hypothetical protein Naga_100016g14 [Nannochloropsis gaditana]) HSP 1 Score: 1068.91 bits (2763), Expect = 0.000e+0 Identity = 517/517 (100.00%), Postives = 517/517 (100.00%), Query Frame = 0 Query: 1 MCAGRLFCHRLGVCLASSGQTFPPSRCILLCGMLAPAHEHYYPFFQCTPLLVRAGADSLTVIHASFSDRAVGPRGMSEIDSLFSALGETGDVDADLSILEALCGLEGVDASAAAAAAVEEEQSDDDEDDSFDGEGQPRKKRARRTRTELNEIEKQRTRRINEQIQSLRSLLEASGLNTKKDKFSILKNTTEYLKKLKLLLNKSQAQIQALAANRRAAAATAAAAKAAAGAAPTQASTSIMPVSPGNALGDTKYYVEVDSNAGKESSNGSLPSGPALGMMIQRPPIAPGTLVEAGSWAPNKKSADYALMFQNASIAMAVASLDGKFVDCNSAFSIISGYSNGEVLQRSVFDLTPAEDCQELMGIVGKMMESPAESAKHFWKRCCFENRDCHCFVSMWLVRKASGEPVFFQCAVLPLEDYPMASKSVTHDASSVPDDGNAIAGPAGEGEGYLALEDRVETSEANALLQPPQQQLEHERQEMPCETEKQRVMESALDPALDSGNAYLQVRDDGETSLDTK 517 MCAGRLFCHRLGVCLASSGQTFPPSRCILLCGMLAPAHEHYYPFFQCTPLLVRAGADSLTVIHASFSDRAVGPRGMSEIDSLFSALGETGDVDADLSILEALCGLEGVDASAAAAAAVEEEQSDDDEDDSFDGEGQPRKKRARRTRTELNEIEKQRTRRINEQIQSLRSLLEASGLNTKKDKFSILKNTTEYLKKLKLLLNKSQAQIQALAANRRAAAATAAAAKAAAGAAPTQASTSIMPVSPGNALGDTKYYVEVDSNAGKESSNGSLPSGPALGMMIQRPPIAPGTLVEAGSWAPNKKSADYALMFQNASIAMAVASLDGKFVDCNSAFSIISGYSNGEVLQRSVFDLTPAEDCQELMGIVGKMMESPAESAKHFWKRCCFENRDCHCFVSMWLVRKASGEPVFFQCAVLPLEDYPMASKSVTHDASSVPDDGNAIAGPAGEGEGYLALEDRVETSEANALLQPPQQQLEHERQEMPCETEKQRVMESALDPALDSGNAYLQVRDDGETSLDTK Sbjct: 1 MCAGRLFCHRLGVCLASSGQTFPPSRCILLCGMLAPAHEHYYPFFQCTPLLVRAGADSLTVIHASFSDRAVGPRGMSEIDSLFSALGETGDVDADLSILEALCGLEGVDASAAAAAAVEEEQSDDDEDDSFDGEGQPRKKRARRTRTELNEIEKQRTRRINEQIQSLRSLLEASGLNTKKDKFSILKNTTEYLKKLKLLLNKSQAQIQALAANRRAAAATAAAAKAAAGAAPTQASTSIMPVSPGNALGDTKYYVEVDSNAGKESSNGSLPSGPALGMMIQRPPIAPGTLVEAGSWAPNKKSADYALMFQNASIAMAVASLDGKFVDCNSAFSIISGYSNGEVLQRSVFDLTPAEDCQELMGIVGKMMESPAESAKHFWKRCCFENRDCHCFVSMWLVRKASGEPVFFQCAVLPLEDYPMASKSVTHDASSVPDDGNAIAGPAGEGEGYLALEDRVETSEANALLQPPQQQLEHERQEMPCETEKQRVMESALDPALDSGNAYLQVRDDGETSLDTK 517
BLAST of EWM25109.1 vs. NCBI_GenBank
Match: gi|553196220|ref|XP_005856293.1| (pas pac sensor hybrid histidine kinase [Nannochloropsis gaditana CCMP526] >gi|422292771|gb|EKU20073.1| pas pac sensor hybrid histidine kinase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 905.59 bits (2339), Expect = 0.000e+0 Identity = 442/442 (100.00%), Postives = 442/442 (100.00%), Query Frame = 0 Query: 76 MSEIDSLFSALGETGDVDADLSILEALCGLEGVDASAAAAAAVEEEQSDDDEDDSFDGEGQPRKKRARRTRTELNEIEKQRTRRINEQIQSLRSLLEASGLNTKKDKFSILKNTTEYLKKLKLLLNKSQAQIQALAANRRAAAATAAAAKAAAGAAPTQASTSIMPVSPGNALGDTKYYVEVDSNAGKESSNGSLPSGPALGMMIQRPPIAPGTLVEAGSWAPNKKSADYALMFQNASIAMAVASLDGKFVDCNSAFSIISGYSNGEVLQRSVFDLTPAEDCQELMGIVGKMMESPAESAKHFWKRCCFENRDCHCFVSMWLVRKASGEPVFFQCAVLPLEDYPMASKSVTHDASSVPDDGNAIAGPAGEGEGYLALEDRVETSEANALLQPPQQQLEHERQEMPCETEKQRVMESALDPALDSGNAYLQVRDDGETSLDTK 517 MSEIDSLFSALGETGDVDADLSILEALCGLEGVDASAAAAAAVEEEQSDDDEDDSFDGEGQPRKKRARRTRTELNEIEKQRTRRINEQIQSLRSLLEASGLNTKKDKFSILKNTTEYLKKLKLLLNKSQAQIQALAANRRAAAATAAAAKAAAGAAPTQASTSIMPVSPGNALGDTKYYVEVDSNAGKESSNGSLPSGPALGMMIQRPPIAPGTLVEAGSWAPNKKSADYALMFQNASIAMAVASLDGKFVDCNSAFSIISGYSNGEVLQRSVFDLTPAEDCQELMGIVGKMMESPAESAKHFWKRCCFENRDCHCFVSMWLVRKASGEPVFFQCAVLPLEDYPMASKSVTHDASSVPDDGNAIAGPAGEGEGYLALEDRVETSEANALLQPPQQQLEHERQEMPCETEKQRVMESALDPALDSGNAYLQVRDDGETSLDTK Sbjct: 1 MSEIDSLFSALGETGDVDADLSILEALCGLEGVDASAAAAAAVEEEQSDDDEDDSFDGEGQPRKKRARRTRTELNEIEKQRTRRINEQIQSLRSLLEASGLNTKKDKFSILKNTTEYLKKLKLLLNKSQAQIQALAANRRAAAATAAAAKAAAGAAPTQASTSIMPVSPGNALGDTKYYVEVDSNAGKESSNGSLPSGPALGMMIQRPPIAPGTLVEAGSWAPNKKSADYALMFQNASIAMAVASLDGKFVDCNSAFSIISGYSNGEVLQRSVFDLTPAEDCQELMGIVGKMMESPAESAKHFWKRCCFENRDCHCFVSMWLVRKASGEPVFFQCAVLPLEDYPMASKSVTHDASSVPDDGNAIAGPAGEGEGYLALEDRVETSEANALLQPPQQQLEHERQEMPCETEKQRVMESALDPALDSGNAYLQVRDDGETSLDTK 442
BLAST of EWM25109.1 vs. NCBI_GenBank
Match: gi|1072227900|gb|OEU12638.1| (hypothetical protein FRACYDRAFT_172104 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 88.5817 bits (218), Expect = 1.192e-15 Identity = 68/239 (28.45%), Postives = 115/239 (48.12%), Query Frame = 0 Query: 146 RTELNEIEKQRTRRINEQIQSLRSLLEASGLNTKK-DKFSILKNTTEYLKKLKLLLNKSQAQIQALAANRRAAAATAAAAKAAAGAAPTQASTSIMPVSPGNALGDTKYYVEVDSNAGKESSNGSLPSGPALGMMIQRP--PIA--PGTLVEA-----GSWAPNK-KSADYALMFQNASIAMAVASLDGKFVDCNSAFSIISGYSNGEVLQRSVFDLTPAEDCQELMGIVGKMMESPAE 373 R E N EK+R+ RI+ QI LR+LL + G+ K K S+L Y++ L+ +S+ L + +GA +A++++ V+ N + + G +P P MM +P PIA P + ++ GS P+K + +DY +F + +I MA+AS+ G F+DCN F IS Y+ E+ +VF+LT +D Q ++ +M+ +P + Sbjct: 33 REERNAREKERSFRISRQINELRNLLSSGGVIVPKGTKSSVLTEAANYIRMLQQHQYRSEIDRHQLVQQ---------VQRIGSGALGQEAASAVRHVAAQNGVWSLGNF-------------GGVP--PKSAMMYHQPSGPIADEPTSSADSASSLNGSTLPSKIEESDYRQVFNSCTIGMAIASMGGAFIDCNKLFCNISNYTKQEICSMTVFNLTSRQDLQSAFDLISQMLSAPLD 247
BLAST of EWM25109.1 vs. NCBI_GenBank
Match: gi|1210515165|dbj|GAX25877.1| (hypothetical protein FisN_6Hh085 [Fistulifera solaris]) HSP 1 Score: 77.0258 bits (188), Expect = 2.328e-11 Identity = 74/301 (24.58%), Postives = 126/301 (41.86%), Query Frame = 0 Query: 148 ELNEIEKQRTRRINEQIQSLRSLLEASGLNTKK-DKFSILKNTTEYLKKLKLLLNKSQAQIQALAANRRAAAATAAAAKAAAGAAPTQASTSIMPVSPGNALGDTKYYVEVDSNAGKESSNGSLPSGPALGMMIQRPPIAPGTLVEAGSWAPNKKSADYALMFQNASIAMAVASLDGKFVDCNSAFSIISGYSNGEVLQRSVFDLTPAEDCQELMGIVGKMMESPAESAK-----HFWKRCCFENRDCHCFVSMWLVRKASGEPVFFQCAVLPLEDYPMASKSVTHDASSVPDDGNAIAGP 442 E N EK+R+ RI ++I LR LL G+ K K S+L Y++ L+ Q Q +A ++ A G A + + +LG+ G +P PA M P + ++A P DY F + I MA+AS+ G F+DCN F+ ++ Y+ ++ ++F+LT +D Q+ + ++ P +S+K + R F+NR +S+ LV+ G F C L + + + H+++ VP A+ P Sbjct: 180 ERNAREKERSFRIAKKINELRELLSTGGVIVPKGTKSSVLTEAASYIRTLQ------QHQYRAEIDRQQLIQQMQMIGGGAHGPQAAAAIRQLAAQNGVWSLGNF----------------GGVPPKPAPAMYPTEPKSSDAGFLQANQLEP----LDYRFFFNSCGIGMAIASMGGAFIDCNQLFTQLTEYTKQDLSSLTIFNLTARQDLQKAFDQISLLISPPMKSSKDSPPTNVVVRGSFKNRP-DLGLSVSLVKGDDGIAKCF-CVTL------IKNPTTPHESNPVPVSFEAVQAP 446
BLAST of EWM25109.1 vs. NCBI_GenBank
Match: gi|1210519797|dbj|GAX21349.1| (hypothetical protein FisN_6Lh085 [Fistulifera solaris]) HSP 1 Score: 76.2554 bits (186), Expect = 4.082e-11 Identity = 81/343 (23.62%), Postives = 140/343 (40.82%), Query Frame = 0 Query: 125 DDEDDSFDG----------------EGQPRKKRAR---RTRTELNEIEKQRTRRINEQIQSLRSLLEASGLNTKK-DKFSILKNTTEYLKKLKLLLNKSQAQIQALAANRRAAAATAAAAKAAAGAAPTQASTSIMPVSPGNALGDTKYYVEVDSNAGKESSNGSLPSGPALGMMIQRPPIAPGTLVEAGSWAPNKKSADYALMFQNASIAMAVASLDGKFVDCNSAFSIISGYSNGEVLQRSVFDLTPAEDCQELMGIVGKMMESPAESAK-----HFWKRCCFENRDCHCFVSMWLVRKASGEPVFFQCAVLPLEDYPMASKSVTHDASSVPDDGNAIAGP 442 DDE D +D EG P++K+ + R E N EK+R+ RI ++I LR LL G+ K K S+L Y++ L+ Q Q +A ++ A G A + + +LG+ G +P P + + A ++A P DY F + I MA+AS+ G F+DCN F+ ++ Y+ ++ ++F+LT +D Q+ + ++ P + +K + R F+NR +S+ LV+ G+ +C + L P + H+++ VP A+ P Sbjct: 141 DDESDGYDSDEEQGGVKASTSCASSEGSPKRKKNKGDSSKRKERNAREKERSFRIAKKINELRDLLSTGGVIVPKGTKSSVLTEAASYIRTLQ------QHQYRAEIDRQQLIQQMQMIGGGAHGPQAAAAIRQLAAQNGVWSLGNF----------------GGVPPKPTMYPSEPKSSDASSGFLQANQLEP----LDYRFFFNSCGIGMAIASMGGAFIDCNQLFTQLTEYTKQDLSSLTIFNLTARQDLQKAFDQISLLISPPMKLSKESPPANVVVRGSFKNRP-DLGLSVSLVK---GDDGIAKCFCVTLIKNPTS----PHESNPVPVSFEAVQAP 449
BLAST of EWM25109.1 vs. NCBI_GenBank
Match: gi|223993223|ref|XP_002286295.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220977610|gb|EED95936.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 76.6406 bits (187), Expect = 4.784e-11 Identity = 64/224 (28.57%), Postives = 98/224 (43.75%), Query Frame = 0 Query: 146 RTELNEIEKQRTRRINEQIQSLRSLLEASGLNTKK-DKFSILKNTTEYLKKLKLLLNKSQAQIQALAANRRAAAATAAAAKAAAGAAPTQASTSIMPVSPGNALGDTKYYVEVDSNAGKESSNGSLPSGPALGMMIQRPPIAPGTLVEAGSWAPNKKSADYALMFQNASIAMAVASLDGKFVDCNSAFSIISGYSNGEVLQRSVFDLTPAEDCQELMGIVGKMM 368 R E N EK+R+ RI +QI LRSLL G+ K K S+L Y+ L+ + + QAL + AT A+ +MP++P +S A + + +P G M P + PN DY +F N+S+ MA+AS+ G F+DCN F +S YS EV ++F++T D Q ++ +M+ Sbjct: 595 RQERNAREKERSCRIAKQIDDLRSLLSRGGVVVAKGTKSSVLAEAANYINVLQQQQVQWEMDRQALVRQMQEVGATPDMAQI--------QQQGVMPMNP-------------NSIAQVQQAASGVP-----GAMTMNP----------STMGPN----DYKFVFNNSSVGMAIASMGGAFIDCNENFCQLSEYSKEEVCAMTIFNMTARSDLQHAFELISQMI 778
BLAST of EWM25109.1 vs. NCBI_GenBank
Match: gi|970647971|gb|KUF87638.1| (Voltage-dependent anion-selective channel protein 3 [Phytophthora nicotianae] >gi|970665438|gb|KUG02091.1| hypothetical protein AM587_10005092 [Phytophthora nicotianae]) HSP 1 Score: 73.1738 bits (178), Expect = 2.411e-10 Identity = 77/291 (26.46%), Postives = 130/291 (44.67%), Query Frame = 0 Query: 142 ARRTRTELNEIEKQRTRRINEQIQSLRSLLEASGLNT-KKDKFSILKNTTEYLKKLKLLLNKSQAQIQALAANRRAAAATAAAAKAAAGAAPTQASTSIMPVS-PGNALGDTKYYVEVDSNAGKESSNGSLPSG-PALGMMIQRPPIA-PGTLVEAGSWAPNKKS-----------ADYALMFQNASIAMAVASLDGKFVDCNSAFSIISGYSNGEVLQRSVFDLTPAEDCQELMGIVGKMM--ESPAESAKHFWKRCCFENRDCHCFVSMWLVRKASGEPVFFQCAVLPL 415 +++ R L E ++R RI+ Q LR+ LEA+G ++ KKDK+S+L+ T EY+ L+ + QI +A + + + G P + P S G L T N G+ S+PS PAL + +P + P + A N S A Y +F N+S+ +A LDG V+ N+ F + + E+ S++ + A D ++ +VGK++ E + +K W +R FVS+ ++ + P C++LPL Sbjct: 104 SKKQRHNLRE--QRRILRISNQFDILRNKLEAAGYSSSKKDKYSVLQATLEYISNLE------RNQIGGVAPHPQMPHHMQHPSPHPNGGVPHHLPS---PCSESGGRLSITAPSPSHVDNKGQVFMIDSMPSPVPALSIPGMQPQTSYPLDMDNMYGGAANGASNASVSEIEGSAASYRDVFANSSMPSLLAKLDGTIVEANALFLELCCKNIDELRLHSLYTMCTAMDAPKMYNLVGKILSCEMASAQSKMMWHFSSTGDRK--VFVSVSMIHDSMHRPANLHCSLLPL 381
BLAST of EWM25109.1 vs. NCBI_GenBank
Match: gi|570995110|gb|ETP52062.1| (hypothetical protein, variant 1 [Phytophthora parasitica P10297] >gi|570995111|gb|ETP52063.1| hypothetical protein, variant 2 [Phytophthora parasitica P10297]) HSP 1 Score: 72.0182 bits (175), Expect = 5.822e-10 Identity = 75/290 (25.86%), Postives = 129/290 (44.48%), Query Frame = 0 Query: 142 ARRTRTELNEIEKQRTRRINEQIQSLRSLLEASGLNT-KKDKFSILKNTTEYLKKLKLLLNKSQAQIQALAANRRAAAATAAAAKAAAGAAPTQASTSIMPVSPGNALGDTKYYVEVDSNAGKESSNGSLPSG-PALGMMIQRPPIA-PGTLVEAGSWAPNKKS-----------ADYALMFQNASIAMAVASLDGKFVDCNSAFSIISGYSNGEVLQRSVFDLTPAEDCQELMGIVGKMM--ESPAESAKHFWKRCCFENRDCHCFVSMWLVRKASGEPVFFQCAVLPL 415 +++ R L E ++R RI+ Q LR+ LEA+G ++ KKDK+S+L+ T EY+ L+ + QI +A + + + G P +S G L T + G+ S+PS PAL + +P + P + A N S A Y +F N+S+ +A LDG V+ N+ F + + E+ S++ + A D ++ +VGK++ E + +K W +R FVS+ ++ + P C++LPL Sbjct: 122 SKKQRHNLRE--QRRILRISNQFDILRNKLEAAGYSSSKKDKYSVLQATLEYISNLE------RNQIGGVAPHPQMPHHMQHPSPHPNGGVPHHLPSSC--SESGGRLSITAPSPSHVDSKGQVFMIDSMPSPVPALSIPGMQPQTSYPLDMDNMYGGAANGASNASVSEIEGSAASYRDVFANSSMPSLLAKLDGTIVEANALFLELCCKNIDELRLHSLYTMCTAMDAPKMYNLVGKILSCEMASAQSKMMWHFSSTGDRK--VFVSVSMIHDSMHRPANLHCSLLPL 399
BLAST of EWM25109.1 vs. NCBI_GenBank
Match: gi|566031313|gb|ETI54224.1| (hypothetical protein, variant 1 [Phytophthora parasitica P1569] >gi|566031314|gb|ETI54225.1| hypothetical protein, variant 2 [Phytophthora parasitica P1569] >gi|570335027|gb|ETO82975.1| hypothetical protein, variant 1 [Phytophthora parasitica P1976] >gi|570335028|gb|ETO82976.1| hypothetical protein, variant 2 [Phytophthora parasitica P1976]) HSP 1 Score: 72.0182 bits (175), Expect = 7.350e-10 Identity = 75/290 (25.86%), Postives = 129/290 (44.48%), Query Frame = 0 Query: 142 ARRTRTELNEIEKQRTRRINEQIQSLRSLLEASGLNT-KKDKFSILKNTTEYLKKLKLLLNKSQAQIQALAANRRAAAATAAAAKAAAGAAPTQASTSIMPVSPGNALGDTKYYVEVDSNAGKESSNGSLPSG-PALGMMIQRPPIA-PGTLVEAGSWAPNKKS-----------ADYALMFQNASIAMAVASLDGKFVDCNSAFSIISGYSNGEVLQRSVFDLTPAEDCQELMGIVGKMM--ESPAESAKHFWKRCCFENRDCHCFVSMWLVRKASGEPVFFQCAVLPL 415 +++ R L E ++R RI+ Q LR+ LEA+G ++ KKDK+S+L+ T EY+ L+ + QI +A + + + G P +S G L T + G+ S+PS PAL + +P + P + A N S A Y +F N+S+ +A LDG V+ N+ F + + E+ S++ + A D ++ +VGK++ E + +K W +R FVS+ ++ + P C++LPL Sbjct: 122 SKKQRHNLRE--QRRILRISNQFDILRNKLEAAGYSSSKKDKYSVLQATLEYISNLE------RNQIGGVAPHPQMPHHMQHPSPHPNGGVPHHLPSSC--SESGGRLSITAPSPSHVDSKGQVFMIDSMPSPVPALSIPGMQPQTSYPLDMDNMYGGAANGASNASVSEIEGSAASYRDVFANSSMPSLLAKLDGTIVEANALFLELCCKNIDELRLHSLYTMCTAMDAPKMYNLVGKILSCEMASAQSKMMWHFSSTGDRK--VFVSVSMIHDSMHRPANLHCSLLPL 399
BLAST of EWM25109.1 vs. NCBI_GenBank
Match: gi|953500198|emb|CEG38839.1| (pas pac sensor hybrid histidine kinase [Plasmopara halstedii]) HSP 1 Score: 71.2478 bits (173), Expect = 1.318e-9 Identity = 75/290 (25.86%), Postives = 137/290 (47.24%), Query Frame = 0 Query: 150 NEIEKQRTRRINEQIQSLRSLLEASGLNT-KKDKFSILKNTTEYLKKLKLLLNKSQAQIQALAANRRAAAATAAAAKAAAGA------APTQASTSIMPVS-PGNALGDTKYYV-EVDSNAGKESSNGSLPSG-PALGMMIQRP----PIAPGTL---VEAGSWAPNK-----KSADYALMFQNASIAMAVASLDGKFVDCNSAFSIISGYSNGEVLQRSVFDLTPAEDCQELMGIVGKMM--ESPAESAKHFWKRCCFENRDCHCFVSMWLVRKASGEPVFFQCAVLPL 415 N E++R RI+ Q + LR+ LEA+G ++ KKDK+S+L+ T EY+ L+ + QI +A + + A+ + G +P S + ++ P ++ D+K +V +DS +PS PAL + +P P+ + G+ A N +A Y +F ++S+ +A LDG V+ N+ F +S + E+ S++ + A D ++ +V K++ E + +K W +R FVS+ ++ + P C++LPL Sbjct: 199 NLREQRRILRISNQFEILRNKLEAAGYSSSKKDKYSVLQATLEYISNLE------RNQINGVAPHHQVQHHLQHASSHSHGVVSHHLPSPCNDSNGRLSITAPSSSHVDSKGHVFMIDS----------MPSPVPALSIPGMQPQTSYPLEMDNMYANTANGTSAANALEIEGSAASYRDVFASSSMPSLLAKLDGTIVEANALFLELSCKNIDELRLHSLYTMCTAMDAPKMYNLVDKILSCEMASAQSKMMWHFSSAGDRK--VFVSVSMIHDSMHRPANLHCSLLPL 470 The following BLAST results are available for this feature:
BLAST of EWM25109.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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