EWM25118.1, cds5575 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25118.1 vs. NCBI_GenBank
Match: gi|585106756|gb|EWM25118.1| (Lamin Tail domain protein [Nannochloropsis gaditana]) HSP 1 Score: 890.182 bits (2299), Expect = 0.000e+0 Identity = 441/441 (100.00%), Postives = 441/441 (100.00%), Query Frame = 0 Query: 1 MRRLIEIPWLDECDQDGTSARCQNPRRRSILYRSPPYISDVDVKREIITISNPESVPVDLSGHSLCDKGQHHRYEFEEGYTLAPGAELHVYCAPGKYGVEEEERPGELQILLWTTREGRPRRREVLNQEGDRVTLIDQNGMEIAALEVTVNGDDEEEEGEREKRGTGKAERREEIKRLYLYRLEVLQLKYAKSVVTWLQGSRLALMVLAFIFVLLNDLHSYVLLEVGGFALDMAARYLDPVRLPRSRQRVFALVADRLDSASLLAVLMTGLVETGGPLYGPNPVHRVRLGLGMLLIEVLAFWFEVLVEGSTRLAAADAVAPYWRQGPAPAGEEEVSVQTGPYRKWLRQHLGRCPALITFATGGNHLFLVLAVVRLAHAQAGGSEGLVVRAVSVASRIMAYLPLPRAIVSNWQFLLIAVCLSAMYRCILIWAELLDLLESKL 441 MRRLIEIPWLDECDQDGTSARCQNPRRRSILYRSPPYISDVDVKREIITISNPESVPVDLSGHSLCDKGQHHRYEFEEGYTLAPGAELHVYCAPGKYGVEEEERPGELQILLWTTREGRPRRREVLNQEGDRVTLIDQNGMEIAALEVTVNGDDEEEEGEREKRGTGKAERREEIKRLYLYRLEVLQLKYAKSVVTWLQGSRLALMVLAFIFVLLNDLHSYVLLEVGGFALDMAARYLDPVRLPRSRQRVFALVADRLDSASLLAVLMTGLVETGGPLYGPNPVHRVRLGLGMLLIEVLAFWFEVLVEGSTRLAAADAVAPYWRQGPAPAGEEEVSVQTGPYRKWLRQHLGRCPALITFATGGNHLFLVLAVVRLAHAQAGGSEGLVVRAVSVASRIMAYLPLPRAIVSNWQFLLIAVCLSAMYRCILIWAELLDLLESKL Sbjct: 1 MRRLIEIPWLDECDQDGTSARCQNPRRRSILYRSPPYISDVDVKREIITISNPESVPVDLSGHSLCDKGQHHRYEFEEGYTLAPGAELHVYCAPGKYGVEEEERPGELQILLWTTREGRPRRREVLNQEGDRVTLIDQNGMEIAALEVTVNGDDEEEEGEREKRGTGKAERREEIKRLYLYRLEVLQLKYAKSVVTWLQGSRLALMVLAFIFVLLNDLHSYVLLEVGGFALDMAARYLDPVRLPRSRQRVFALVADRLDSASLLAVLMTGLVETGGPLYGPNPVHRVRLGLGMLLIEVLAFWFEVLVEGSTRLAAADAVAPYWRQGPAPAGEEEVSVQTGPYRKWLRQHLGRCPALITFATGGNHLFLVLAVVRLAHAQAGGSEGLVVRAVSVASRIMAYLPLPRAIVSNWQFLLIAVCLSAMYRCILIWAELLDLLESKL 441
BLAST of EWM25118.1 vs. NCBI_GenBank
Match: gi|299471389|emb|CBN79343.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 93.9745 bits (232), Expect = 4.876e-17 Identity = 65/188 (34.57%), Postives = 96/188 (51.06%), Query Frame = 0 Query: 31 LYRSPPYISDVDVKREIITISNPESV--PVDLSGHSLCDKGQHHRYEFEEGYTLAPGAELHVYCAPGKY---GVEEEERPGELQILLWTTREGRPRRREVLNQEGDRVTLIDQNGMEIAALEVTVNGDDEEEEGEREKRGTGKAERREEIKRLYLYRLEVLQLKYAKSVVTWLQGSRLALMVLAFIFV 213 L+R PP+I+ D++ E +TI NP SV +L+G++L D+ Q H Y F E + L L +YC PGK+ + +P LLW ++G RR+EV+ G+ + L D G E+A LEV G D EE T +R ++ L R VL L Y + V T L +R+ + F+ V Sbjct: 43 LFRPPPFIAHADLEAETVTIRNP-SVWRGANLAGYTLTDRLQRHTYHFPERFVLRARTSLTLYCCPGKFSEGALHNLPQP----FLLWHNQDGSLRRKEVMENSGETLVLSDAKGNEVAVLEVP--GTDGEETSR-----TLPGVKRSQVLAL---RTLVLSLCYLRLVCTGLAAARVTVHPDVFLLV 215
BLAST of EWM25118.1 vs. NCBI_GenBank
Match: gi|325191781|emb|CCA25639.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 81.2629 bits (199), Expect = 5.304e-13 Identity = 59/197 (29.95%), Postives = 89/197 (45.18%), Query Frame = 0 Query: 3 RLIEIPWLDECDQDGTSARCQNPRRRSILYRSPPYISDVDVKREIITISNPESVPVDLSGHSLCDKGQHHRYEFEEGYTLAPGAELHVYCAPGKYGVEEEERPGELQ-ILLWTTREGRPRRREVLNQEGDRVTLIDQNGMEIAALEVTVNGD-DEEEEGEREKRGTGKAERREEIKRLYLYRLEVLQLKYAKSVVTW 197 R + P LD GT C +S++ R YIS VDV+++ I I+NP VDLSG+ + + F YTL G E+ V+CAPG ++ + LQ L WTT G R L+D +EIA++ + NG+ R RG + EI R R++ +++ A + + W Sbjct: 7 RRVRYPRLDRKVARGTHQICH----QSVMQRV--YISRVDVQKQWIVIANPTDGSVDLSGYIITSTDGRQTFRFPRKYTLLSGDEVTVWCAPGWIALDTDN---LLQPYLFWTTENGALRDTPFFTSSSSEAILLDSFMIEIASVRIDSNGNLSFRVRHSRSIRGMF-IQAMHEIPRCLGLRMKNFKVQSAHTHLRW 193
BLAST of EWM25118.1 vs. NCBI_GenBank
Match: gi|635361843|emb|CCI49283.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 75.8702 bits (185), Expect = 3.030e-11 Identity = 53/197 (26.90%), Postives = 88/197 (44.67%), Query Frame = 0 Query: 3 RLIEIPWLDECDQDGTSARCQNPRRRSILYRSPPYISDVDVKREIITISNPESVPVDLSGHSLCDKGQHHRYEFEEGYTLAPGAELHVYCAPGKYGVEEEERPGELQ-ILLWTTREGRPRRREVLNQEGDRVTLIDQNGMEIAALEVTVNGD-DEEEEGEREKRGTGKAERREEIKRLYLYRLEVLQLKYAKSVVTW 197 R + P LD GT C +S++ R YI+ VDV+++ I I+NP VDLSG+ + + F Y L G E+ V+CAPG ++ + LQ L WT G R + L+D +EIA++ + NG+ R +G + E+ R +R++ +++ + + W Sbjct: 7 RRVRYPRLDRKVARGTHQICH----QSVMQRV--YIARVDVQKQWIVIANPTDGSVDLSGYIITSTDGRQTFRFPRKYILLSGDEVTVWCAPGSIELDTDN---LLQPYLFWTMENGALRHIPFFTSTSNEAILLDSFMIEIASVRIDSNGNLSYRVRHSRSIKGMF-VQAMHEVPRCLGFRMKTFKVQSTHTHLRW 193
BLAST of EWM25118.1 vs. NCBI_GenBank
Match: gi|953501492|emb|CEG37493.1| (Lamin Tail Domain [Plasmopara halstedii]) HSP 1 Score: 73.9442 bits (180), Expect = 1.622e-10 Identity = 40/121 (33.06%), Postives = 66/121 (54.55%), Query Frame = 0 Query: 37 YISDVDVKREIITISNPESVPVDLSGHSLCDKGQHHRYEFEEGYTLAPGAELHVYCAPGKYGVEEEERPGELQ-ILLWTTREGRPRRREVLNQE-GDRVTLIDQNGMEIAALEVTVNGDDE 155 YIS +V ++ + +SNP ++L+G +L G Y F YTL PG E+ ++C+PG+ ++E+ LQ L WT +G R + + V L+D +E+A++ VTV+G E Sbjct: 35 YISRANVSKQWVVVSNPSEACINLTGFNLSCSGCDDVYCFPFNYTLLPGDEVTIWCSPGRLKLDED---NLLQPYLFWTQPDGSLRHKSFFTSSRANDVVLLDPFLVEVASIRVTVDGRRE 152
BLAST of EWM25118.1 vs. NCBI_GenBank
Match: gi|566022261|gb|ETI45172.1| (hypothetical protein F443_10153 [Phytophthora parasitica P1569]) HSP 1 Score: 72.0182 bits (175), Expect = 6.359e-10 Identity = 44/142 (30.99%), Postives = 69/142 (48.59%), Query Frame = 0 Query: 37 YISDVDVKREIITISNPESVPVDLSGHSLCDKGQHHRYEFEEGYTLAPGAELHVYCAPG--KYGVEEEERPGELQILLWTTREGRPRRREVLN-QEGDRVTLIDQNGMEIAALEVTVNGDDEEEEGEREKRGTGKAERREEI 175 Y+S D ++ + +SNP VD++G SL G + F YTL PG E+ V+C+PG K V+ +P L WT +G R + + + V L+D +E+A++ VNGD ++E + R EI Sbjct: 35 YVSRADSTKQWVVVSNPSEQSVDMTGFSLSCSGSSDVFHFPAKYTLLPGDEVTVWCSPGGLKLDVDNLLQP----YLFWTKADGSLRHEPFFSAAQANEVLLLDPLLIEVASIR--VNGDGKKEFRVLHCKSAHSRTLRSEI 170
BLAST of EWM25118.1 vs. NCBI_GenBank
Match: gi|570983190|gb|ETP43066.1| (hypothetical protein F442_10058 [Phytophthora parasitica P10297]) HSP 1 Score: 72.0182 bits (175), Expect = 6.768e-10 Identity = 44/142 (30.99%), Postives = 69/142 (48.59%), Query Frame = 0 Query: 37 YISDVDVKREIITISNPESVPVDLSGHSLCDKGQHHRYEFEEGYTLAPGAELHVYCAPG--KYGVEEEERPGELQILLWTTREGRPRRREVLN-QEGDRVTLIDQNGMEIAALEVTVNGDDEEEEGEREKRGTGKAERREEI 175 Y+S D ++ + +SNP VD++G SL G + F YTL PG E+ V+C+PG K V+ +P L WT +G R + + + V L+D +E+A++ VNGD ++E + R EI Sbjct: 35 YVSRADSTKQWVVVSNPSEQSVDMTGFSLSCSGSSDVFHFPAKYTLLPGDEVTVWCSPGGLKLDVDNLLQP----YLFWTKADGSLRHEPFFSAAQANEVLLLDPLLIEVASIR--VNGDGKKEFRVLHCKSAHSRTLRSEI 170
BLAST of EWM25118.1 vs. NCBI_GenBank
Match: gi|568017509|gb|ETL91686.1| (hypothetical protein L917_09764 [Phytophthora parasitica] >gi|568047924|gb|ETM44992.1| hypothetical protein L914_09819 [Phytophthora parasitica] >gi|570325880|gb|ETO73828.1| hypothetical protein F444_10250 [Phytophthora parasitica P1976]) HSP 1 Score: 72.0182 bits (175), Expect = 6.890e-10 Identity = 44/142 (30.99%), Postives = 69/142 (48.59%), Query Frame = 0 Query: 37 YISDVDVKREIITISNPESVPVDLSGHSLCDKGQHHRYEFEEGYTLAPGAELHVYCAPG--KYGVEEEERPGELQILLWTTREGRPRRREVLN-QEGDRVTLIDQNGMEIAALEVTVNGDDEEEEGEREKRGTGKAERREEI 175 Y+S D ++ + +SNP VD++G SL G + F YTL PG E+ V+C+PG K V+ +P L WT +G R + + + V L+D +E+A++ VNGD ++E + R EI Sbjct: 35 YVSRADSTKQWVVVSNPSEQSVDMTGFSLSCSGSSDVFHFPAKYTLLPGDEVTVWCSPGGLKLDVDNLLQP----YLFWTKADGSLRHEPFFSAAQANEVLLLDPLLIEVASIR--VNGDGKKEFRVLHCKSAHSRTLRSEI 170
BLAST of EWM25118.1 vs. NCBI_GenBank
Match: gi|675168715|ref|XP_008893242.1| (hypothetical protein PPTG_01621 [Phytophthora parasitica INRA-310] >gi|568106818|gb|ETN21448.1| hypothetical protein PPTG_01621 [Phytophthora parasitica INRA-310] >gi|570949724|gb|ETP14981.1| hypothetical protein F441_10094 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 72.0182 bits (175), Expect = 7.076e-10 Identity = 44/142 (30.99%), Postives = 69/142 (48.59%), Query Frame = 0 Query: 37 YISDVDVKREIITISNPESVPVDLSGHSLCDKGQHHRYEFEEGYTLAPGAELHVYCAPG--KYGVEEEERPGELQILLWTTREGRPRRREVLN-QEGDRVTLIDQNGMEIAALEVTVNGDDEEEEGEREKRGTGKAERREEI 175 Y+S D ++ + +SNP VD++G SL G + F YTL PG E+ V+C+PG K V+ +P L WT +G R + + + V L+D +E+A++ VNGD ++E + R EI Sbjct: 35 YVSRADSTKQWVVVSNPSEQSVDMTGFSLSCSGSSDVFHFPAKYTLLPGDEVTVWCSPGGLKLDVDNLLQP----YLFWTKADGSLRHEPFFSAAQANEVLLLDPLLIEVASIR--VNGDGKKEFRVLHCKSAHSRTLRSEI 170
BLAST of EWM25118.1 vs. NCBI_GenBank
Match: gi|567959572|gb|ETK85141.1| (hypothetical protein L915_09934 [Phytophthora parasitica]) HSP 1 Score: 72.0182 bits (175), Expect = 7.076e-10 Identity = 44/142 (30.99%), Postives = 69/142 (48.59%), Query Frame = 0 Query: 37 YISDVDVKREIITISNPESVPVDLSGHSLCDKGQHHRYEFEEGYTLAPGAELHVYCAPG--KYGVEEEERPGELQILLWTTREGRPRRREVLN-QEGDRVTLIDQNGMEIAALEVTVNGDDEEEEGEREKRGTGKAERREEI 175 Y+S D ++ + +SNP VD++G SL G + F YTL PG E+ V+C+PG K V+ +P L WT +G R + + + V L+D +E+A++ VNGD ++E + R EI Sbjct: 35 YVSRADSTKQWVVVSNPSEQSVDMTGFSLSCSGSSDVFHFPAKYTLLPGDEVTVWCSPGGLKLDVDNLLQP----YLFWTKADGSLRHEPFFSAAQANEVLLLDPLLIEVASIR--VNGDGKKEFRVLHCKSAHSRTLRSEI 170 The following BLAST results are available for this feature:
BLAST of EWM25118.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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