EWM25139.1, cds5573 (CDS) Nannochloropsis gaditana

Overview
NameEWM25139.1
Unique Namecds5573
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:349291..349917 -
Alignment locationCM002466.1:349045..349128 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25139.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100016g18.2948.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:349291..349917 -
CM002466.1supercontigCM002466.1:349045..349128 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM25139.1 vs. NCBI_GenBank
Match: gi|585106777|gb|EWM25139.1| (hypothetical protein Naga_100016g18 [Nannochloropsis gaditana])

HSP 1 Score: 466.077 bits (1198), Expect = 6.228e-166
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0
Query:    1 MAASASSFDLERELARLSLDTNVYRGYIEGMMDDEDTGDLEERVEAVLAFLGGATDEDLSGFAIDLKTHHQLKHAAEAARETSLIDADKAKERRRYEERLEQDKKAAKTEQDRQAAELKSRTEGDRATMRGREAILNKYAFGDDVVDEDGNPVGKPRGGKDDKSGAGEADVVLGALLGANSNKAQVEAAAKAMREKSKAEHEKKVLREKELLLRDKMRKESEKRRTMKREKQRGCG 236
            MAASASSFDLERELARLSLDTNVYRGYIEGMMDDEDTGDLEERVEAVLAFLGGATDEDLSGFAIDLKTHHQLKHAAEAARETSLIDADKAKERRRYEERLEQDKKAAKTEQDRQAAELKSRTEGDRATMRGREAILNKYAFGDDVVDEDGNPVGKPRGGKDDKSGAGEADVVLGALLGANSNKAQVEAAAKAMREKSKAEHEKKVLREKELLLRDKMRKESEKRRTMKREKQRGCG
Sbjct:    1 MAASASSFDLERELARLSLDTNVYRGYIEGMMDDEDTGDLEERVEAVLAFLGGATDEDLSGFAIDLKTHHQLKHAAEAARETSLIDADKAKERRRYEERLEQDKKAAKTEQDRQAAELKSRTEGDRATMRGREAILNKYAFGDDVVDEDGNPVGKPRGGKDDKSGAGEADVVLGALLGANSNKAQVEAAAKAMREKSKAEHEKKVLREKELLLRDKMRKESEKRRTMKREKQRGCG 236          
BLAST of EWM25139.1 vs. NCBI_GenBank
Match: gi|553178211|ref|XP_005852530.1| (ccd43 dicdi ame: coiled-coil domain-containing 43-like protein [Nannochloropsis gaditana CCMP526] >gi|422296004|gb|EKU23303.1| ccd43 dicdi ame: coiled-coil domain-containing 43-like protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 414.075 bits (1063), Expect = 1.376e-145
Identity = 210/211 (99.53%), Postives = 210/211 (99.53%), Query Frame = 0
Query:    1 MAASASSFDLERELARLSLDTNVYRGYIEGMMDDEDTGDLEERVEAVLAFLGGATDEDLSGFAIDLKTHHQLKHAAEAARETSLIDADKAKERRRYEERLEQDKKAAKTEQDRQAAELKSRTEGDRATMRGREAILNKYAFGDDVVDEDGNPVGKPRGGKDDKSGAGEADVVLGALLGANSNKAQVEAAAKAMREKSKAEHEKKVLREKEL 211
            MAASASSFDLERELARLSLDTNVYRGYIEGMMDDEDTGDLEERVEAVLAFLGGATDEDLSGFAIDLKTHHQLKHAAEAARETSLIDADKAKERRRYEERLEQDKKAAKTEQDRQAAELKSRTEGDRATMRGREAILNKYAFGDDVVDEDGNPVGKPRGGKDDKSGAGEADVVLGALLGANSNKAQVEAAAKAMREKSKAEHEKKVLREK L
Sbjct:    1 MAASASSFDLERELARLSLDTNVYRGYIEGMMDDEDTGDLEERVEAVLAFLGGATDEDLSGFAIDLKTHHQLKHAAEAARETSLIDADKAKERRRYEERLEQDKKAAKTEQDRQAAELKSRTEGDRATMRGREAILNKYAFGDDVVDEDGNPVGKPRGGKDDKSGAGEADVVLGALLGANSNKAQVEAAAKAMREKSKAEHEKKVLREKHL 211          
BLAST of EWM25139.1 vs. NCBI_GenBank
Match: gi|635367140|emb|CCI44652.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 105.145 bits (261), Expect = 5.206e-24
Identity = 89/236 (37.71%), Postives = 121/236 (51.27%), Query Frame = 0
Query:   14 LARLSLDTNVYRGYIEGMMDDEDTGDLEERVEAVLAFLGGATDEDLSGFAIDLKTHHQLKHAAEAARETSLIDADKAK-----------ERRRYEERL-EQDKKAAKTEQDRQAAELKSRTEGDRATMRGREAILNKYAFGDDV-VDEDGNPVGKPRGGKDDKSGAGEADVVLGALLGANSNKAQVEAAAKAMREKSKAEHEKKVLREKELLLRDKMRKESEKRRTMKREKQRGCG 236
            ++ L LD +VY  Y++GM+ DED+ D+  RV+    FL  A+   LS      +   +L  A E   +   I AD  K           E   ++ RL EQ+K+AAK    ++  EL +R +     +  R+ ++ +Y F      DEDGN       GK     AG  D V       N+NK +V  A   +REK K EH KKV REKELL +D++RKE  KRRT KREKQRGCG
Sbjct:   15 VSALLLDEDVYTEYVKGMLQDEDS-DISARVQNACDFLYSASTGVLSE-----EEQKKLLDAGEMEAKVKEIVADTQKLLEKKEASRIAEIELHQIRLYEQEKRAAKVACAKEQEELHARQKMHPDELARRDFLIREYGFSASAEFDEDGNITKIDEKGK----PAGAIDAV-----EQNTNKLRVHQAQAGIREKMKVEHAKKVAREKELLEKDRLRKEKAKRRTQKREKQRGCG 235          
BLAST of EWM25139.1 vs. NCBI_GenBank
Match: gi|813192184|ref|XP_012207974.1| (hypothetical protein SPRG_13210 [Saprolegnia parasitica CBS 223.65] >gi|641526999|gb|KDO21319.1| hypothetical protein SPRG_13210 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 97.0561 bits (240), Expect = 4.872e-21
Identity = 79/233 (33.91%), Postives = 125/233 (53.65%), Query Frame = 0
Query:    7 SFD--LERELARLSLDTNVYRGYIEGMMDDEDTGDLEERVEAVLAFLGGATDEDLSGFAIDLKTHHQLKHAAEAARETSLIDADKAKERRRYEERLEQDKKAAKTEQDRQAAELKSRTEGDRATMRGREAILNKYAFGDD-VVDEDGNPVGKPRGGKDDKSGAGEADVVLGALLGANSNKAQVEAAAKAMREKSKAEHEKKVLREKELLLRDKMRKESEKRRTMKREKQRGCG 236
            +FD  L + L  L++D  VY  Y+ G++ DEDT DL+ER +  +  L    ++D     +D +   +     +AA + +    ++AK     EE+ + + K  +  + ++A + ++R    R  M  RE ILN+Y   D   +DEDGN + +    K ++SG              N+NK Q +   +A+R+K K EH+ KV R+KELL  D++RKE  KRRT K+EKQRG G
Sbjct:    2 TFDDWLCKRLDELAIDGEVYGEYVRGIVADEDT-DLDERCQTAVDVLRAVVEDDAGLAGLDAQIKAKWLEQEDAAAKKAAQSLEQAK--LELEEKKKAELKLVEENERKEAEKAQARQHMTREEMLQREKILNEYGAADSSFLDEDGNVIVRE-TKKTEESGP------------VNTNKTQAKEHQQAIRDKMKKEHDSKVKRDKELLEADRLRKEKAKRRTQKKEKQRGAG 218          
BLAST of EWM25139.1 vs. NCBI_GenBank
Match: gi|669164788|ref|XP_008617956.1| (hypothetical protein SDRG_13637 [Saprolegnia diclina VS20] >gi|530730317|gb|EQC28559.1| hypothetical protein SDRG_13637 [Saprolegnia diclina VS20])

HSP 1 Score: 96.6709 bits (239), Expect = 6.205e-21
Identity = 80/235 (34.04%), Postives = 124/235 (52.77%), Query Frame = 0
Query:    7 SFD--LERELARLSLDTNVYRGYIEGMMDDEDTGDLEERVEAVLAFLGGATDED--LSGFAIDLKTHHQLKHAAEAARETSLIDADKAKERRRYEERLEQDKKAAKTEQDRQAAELKSRTEGDRATMRGREAILNKYAFGDD-VVDEDGNPVGKPRGGKDDKSGAGEADVVLGALLGANSNKAQVEAAAKAMREKSKAEHEKKVLREKELLLRDKMRKESEKRRTMKREKQRGCG 236
            +FD  L + L  L++D  VY  Y+ G++ DEDT DL+ER +  +  L    + D  L+G    +K     +  A A +    ++  K +     EE+ + + K  +  + ++A + ++R    R  M  RE ILN+Y   D   +DEDGN + +    K ++SG              N+NK Q +   +A+R+K K EH+ KV R+KELL  D++RKE  KRRT K+EKQRG G
Sbjct:    2 TFDDWLCKRLDELAIDGEVYGEYVRGIVADEDT-DLDERCQTAVDVLRAVVENDAGLAGLDAQIKAKWLEQEDAAATKAAQSLEQAKLE----LEEKKKAELKLVEENERKEAEKAQARQHMTREEMLQREKILNEYGAADSSFLDEDGNVIVRE-TKKTEESGP------------VNTNKTQAKEHQQAIRDKMKKEHDSKVKRDKELLEADRLRKEKAKRRTQKKEKQRGAG 218          
BLAST of EWM25139.1 vs. NCBI_GenBank
Match: gi|1173952242|gb|OQR99965.1| (hypothetical protein ACHHYP_03778 [Achlya hypogyna])

HSP 1 Score: 101.293 bits (251), Expect = 6.931e-21
Identity = 87/238 (36.55%), Postives = 129/238 (54.20%), Query Frame = 0
Query:    7 SFD--LERELARLSLDTNVYRGYIEGMMDDEDTGDLEERVEAVLAFLGGATDED--LSGFAIDLKTHHQLKHAAEAARETSLIDADKAKERRRYEERLEQDKKAAKTEQDRQAAELKSRTEGDRATMRGREAILNKYAFGDD-VVDEDGNPV---GKPRGGKDDKSGAGEADVVLGALLGANSNKAQVEAAAKAMREKSKAEHEKKVLREKELLLRDKMRKESEKRRTMKREKQRGCG 236
            +FD  L + L  L++D  VY  Y+ G++ D+D+ DL+ER    +  L    ++D  L G A  LK    L+    AA++ +   A    E+ R EE+ + + K  +  + ++A +  +R    R  +  RE ILN+Y   D   +DEDGN +    K RG  +D SG              N+NK+Q +A  + +R+K K EHE+KV R+KELL  D++RKE  KRRT KREKQRG G
Sbjct:    2 TFDDWLCKRLNDLAIDGEVYGEYVRGIVADQDS-DLDERCGMAVDVLRAVVEDDTVLDGLADQLKAK-WLEQEDAAAKQVA---ASLELEKLRIEEKKQAELKLVEENERKEAEKALARQNMTREEILQREKILNEYGAADSSFMDEDGNVIIREAKARGVSED-SGP------------VNTNKSQAQAHQQNLRDKMKKEHEQKVKRDKELLEADRLRKEKAKRRTQKREKQRGAG 221          
BLAST of EWM25139.1 vs. NCBI_GenBank
Match: gi|673032232|ref|XP_008870077.1| (hypothetical protein H310_06702 [Aphanomyces invadans] >gi|574474077|gb|ETW01079.1| hypothetical protein H310_06702 [Aphanomyces invadans])

HSP 1 Score: 96.6709 bits (239), Expect = 7.607e-21
Identity = 85/241 (35.27%), Postives = 123/241 (51.04%), Query Frame = 0
Query:    1 MAASASSFD--LERELARLSLDTNVYRGYIEGMMDDEDTGDLEERVEAVLAFLGGATDEDLSGFAIDLKTHHQLKHAAEAARETSLIDADKAKE--RRRYEERLEQDKKAAKTEQDRQAAELKSRTEGDRATMRGREAILNKY-AFGDDVVDEDGNPVGKPRGGKDDKSGAGEADVVLGALLGANSNKAQVEAAAKAMREKSKAEHEKKVLREKELLLRDKMRKESEKRRTMKREKQRGCG 236
            MA S SSFD  L   L  LS+D+ VY  Y++G++ D +T +L ER  + +  L     +D    A+D       K   E  RE   + A + +E   R   E++E+ K     +Q  +A +  +R    +  ++ RE IL  Y A GD   DEDGN + K     ++             L   N+N+ Q +   + MREK K EH+ KV REKELL  D++RK+  ++RT KREKQRGCG
Sbjct:    1 MATSTSSFDMWLYARLEALSVDSEVYGEYVKGIVADTET-ELGERCSSAVDILRAVLGDD---AALDTMAGELQKKWLEHERELVELKAQELEEVKARHLAEKMEELKLVELNKQ-AEAEKALARAHMSKEELQQREKILRDYGAIGDSEFDEDGNVIFKGSQKTEE-------------LSTVNTNRGQGKVMQQEMREKMKKEHDAKVKREKELLEADRLRKDKAQKRTQKREKQRGCG 223          
BLAST of EWM25139.1 vs. NCBI_GenBank
Match: gi|325191578|emb|CCA25841.1| (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 96.6709 bits (239), Expect = 7.791e-21
Identity = 81/233 (34.76%), Postives = 117/233 (50.21%), Query Frame = 0
Query:   17 LSLDTNVYRGYIEGMMDDEDTGDLEERVEAVLAFLGGATDEDLSGFAIDLKTHHQLKHAAEAARETSLI-----------DADKAKERRRYEERL-EQDKKAAKTEQDRQAAELKSRTEGDRATMRGREAILNKYAFGDDV-VDEDGNPVGKPRGGKDDKSGAGEADVVLGALLGANSNKAQVEAAAKAMREKSKAEHEKKVLREKELLLRDKMRKESEKRRTMKREKQRGCG 236
            L LD +VY  Y++GM+ DED+ D+  RV     FL  A     S   +  +   +L +AAE   +   I           +A +  E    + RL E +K+AA+  + ++  EL +R +     +  ++ ++ +Y F      DEDGN        K D   A E           N+NK +V  A   +REK K+EH KKV REKELL +D++RKE  KR+T KREKQRGCG
Sbjct:   18 LLLDEDVYTEYVKGMLQDEDS-DISARVRNACDFLSSA-----SAGVVSEEEQMKLLNAAEMEAQVEEIVAITQKLLEEKEASRIAEIELQQTRLYEHEKRAAQLARAKEQEELNTRQKMHPDELARKDFLIREYGFSALAEFDEDGNITKIDEKDKTDAMDAVEK----------NTNKLRVHQAQAGIREKMKSEHAKKVAREKELLEKDRLRKEKAKRKTQKREKQRGCG 234          
BLAST of EWM25139.1 vs. NCBI_GenBank
Match: gi|698779507|ref|XP_009822797.1| (hypothetical protein H257_01338 [Aphanomyces astaci] >gi|574122458|gb|ETV87934.1| hypothetical protein H257_01338 [Aphanomyces astaci])

HSP 1 Score: 95.9005 bits (237), Expect = 1.488e-20
Identity = 84/241 (34.85%), Postives = 131/241 (54.36%), Query Frame = 0
Query:    4 SASSFD--LERELARLSLDTNVYRGYIEGMMDDEDTGDLEERVEAVLAFLGGATDED--LSGFAIDLK---THHQLKHAAEAARETSLIDADKAKERRRYEERLEQDKKAAKTEQDRQAAELKSRTEGDRATMRGREAILNKY-AFGDDVVDEDGNPVGKPRGGKDDKSGAGEADVVLGALLGANSNKAQVEAAAKAMREKSKAEHEKKVLREKELLLRDKMRKESEKRRTMKREKQRGCG 236
            ++S+FD  L   L  LS+D+ VY  Y++G++ D +T +LEER    +  L     +D  L   A +L+   T H+L+     A+E      +KAK R   E+   ++ K  +  +  +A + ++R+   +  ++ RE IL  Y A GD   DEDGN + K     ++ S      VV       N+N+ Q + A + +R+K K EH+ KV REKELL  D++RK+  ++RT KREKQRGCG
Sbjct:    2 ASSTFDTWLATRLEELSVDSEVYGEYVKGIVADTET-ELEERCSTAVDILRAVLGDDAALDTMAGELQAKWTEHELEVIELKAQEL-----EKAKARHLVEKM--EELKLVELNKQAEADKAQARSHMSKEELQQREKILRDYGAVGDSEFDEDGNVIFKGSQQTEELS------VV-------NTNRGQGKVAQQELRDKMKKEHDAKVKREKELLEADRLRKDKAQKRTQKREKQRGCG 221          
BLAST of EWM25139.1 vs. NCBI_GenBank
Match: gi|298708995|emb|CBJ30946.1| (hypothetical protein Esi_0226_0020 [Ectocarpus siliculosus])

HSP 1 Score: 81.6481 bits (200), Expect = 3.538e-15
Identity = 85/241 (35.27%), Postives = 110/241 (45.64%), Query Frame = 0
Query:    6 SSFD--LERELARLSLDTNVYRGYIEGMMDDEDTGDLEERVEAVLAFLGGAT--DEDLSGFAIDLKTHHQLKHAAEAARETSL-------IDADKAKERRRYEERLEQDKKAAKTEQDRQAAELKSRTEGDRATMRGREAILNKYAFGDDVVDEDGNPVGKPRGGKDDKSGAGEADVVLGALLGANSNKAQVEAAAKAMREKSKAEHEKKVLREKELLLRDKMRKESEK--RRTMKREKQR 233
            SSFD  L  +L  L LD  VY GY+ G+M DED    EER+E+V+  L GA   D DL  F   L     +K   E   + +        +D+ K +ERR+ EE  +  +  A     R A E   R             +L +Y +  D VDE+GNP+  P     D  G   A   LG   G N NK +V     A RE  K  H    L+ K  L  DKMRKE  K  R+T K E++R
Sbjct:    8 SSFDTWLVDKLDALGLDAEVYGGYVTGIMGDEDNPQ-EERIESVIEILSGAAEEDNDLGEFRSALNERWDMKVEHEEKEKEAAKAAKQKEMDSKKEEERRQVEEADKARRAKADKRVQRSAEEQAERAR-----------LLGEYGYDSDPVDEEGNPL--PPEEGGDGEGGSSAGDSLGEAYGKNLNKERVREEVAAKREAIKKTHHATALQNKIALEADKMRKEMAKNARKTTKGERKR 234          
The following BLAST results are available for this feature:
BLAST of EWM25139.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106777|gb|EWM25139.1|6.228e-166100.00hypothetical protein Naga_100016g18 [Nannochlorops... [more]
gi|553178211|ref|XP_005852530.1|1.376e-14599.53ccd43 dicdi ame: coiled-coil domain-containing 43-... [more]
gi|635367140|emb|CCI44652.1|5.206e-2437.71unnamed protein product [Albugo candida][more]
gi|813192184|ref|XP_012207974.1|4.872e-2133.91hypothetical protein SPRG_13210 [Saprolegnia paras... [more]
gi|669164788|ref|XP_008617956.1|6.205e-2134.04hypothetical protein SDRG_13637 [Saprolegnia dicli... [more]
gi|1173952242|gb|OQR99965.1|6.931e-2136.55hypothetical protein ACHHYP_03778 [Achlya hypogyna... [more]
gi|673032232|ref|XP_008870077.1|7.607e-2135.27hypothetical protein H310_06702 [Aphanomyces invad... [more]
gi|325191578|emb|CCA25841.1|7.791e-2134.76conserved hypothetical protein [Albugo laibachii N... [more]
gi|698779507|ref|XP_009822797.1|1.488e-2034.85hypothetical protein H257_01338 [Aphanomyces astac... [more]
gi|298708995|emb|CBJ30946.1|3.538e-1535.27hypothetical protein Esi_0226_0020 [Ectocarpus sil... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5587rna5587Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications