EWM25135.1, cds5570 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25135.1 vs. NCBI_GenBank
Match: gi|585106773|gb|EWM25135.1| (trans-2-enoyl- reductase [Nannochloropsis gaditana]) HSP 1 Score: 701.434 bits (1809), Expect = 0.000e+0 Identity = 350/350 (100.00%), Postives = 350/350 (100.00%), Query Frame = 0
Query: 1 MILLINQAHFLGASPYIQEQYPSMASSRLVMASLLGRKGPARLRPPGATVAAACRGLSTAAGALADNEVALSILAAPVTAMDVGKKNPTGVEGVGVVTAVGSKVRGFAVHDWAVPTSGSVPTFCSAAKAKENELAKVPSDIPVEFAACMGTALTALRLLAGLKKGDFVLQADADSPVGLAVVQIAQARGVGTINIVVDGPGFWDKISLIKDLGGDVVVSDTYAREDPGFSSIMGELPKPTLALAATEAGVALASKCGGGAKVVNHNTGGSGLLKASAAEIEAAAGLFRSEALQLWVERHPYSDLSVALKEAAEPFKTRRVVLVMSEVPKPQVDEAKLREDFEKLFQRLRA 350
MILLINQAHFLGASPYIQEQYPSMASSRLVMASLLGRKGPARLRPPGATVAAACRGLSTAAGALADNEVALSILAAPVTAMDVGKKNPTGVEGVGVVTAVGSKVRGFAVHDWAVPTSGSVPTFCSAAKAKENELAKVPSDIPVEFAACMGTALTALRLLAGLKKGDFVLQADADSPVGLAVVQIAQARGVGTINIVVDGPGFWDKISLIKDLGGDVVVSDTYAREDPGFSSIMGELPKPTLALAATEAGVALASKCGGGAKVVNHNTGGSGLLKASAAEIEAAAGLFRSEALQLWVERHPYSDLSVALKEAAEPFKTRRVVLVMSEVPKPQVDEAKLREDFEKLFQRLRA
Sbjct: 1 MILLINQAHFLGASPYIQEQYPSMASSRLVMASLLGRKGPARLRPPGATVAAACRGLSTAAGALADNEVALSILAAPVTAMDVGKKNPTGVEGVGVVTAVGSKVRGFAVHDWAVPTSGSVPTFCSAAKAKENELAKVPSDIPVEFAACMGTALTALRLLAGLKKGDFVLQADADSPVGLAVVQIAQARGVGTINIVVDGPGFWDKISLIKDLGGDVVVSDTYAREDPGFSSIMGELPKPTLALAATEAGVALASKCGGGAKVVNHNTGGSGLLKASAAEIEAAAGLFRSEALQLWVERHPYSDLSVALKEAAEPFKTRRVVLVMSEVPKPQVDEAKLREDFEKLFQRLRA 350
BLAST of EWM25135.1 vs. NCBI_GenBank
Match: gi|1160565727|ref|XP_020429072.1| (trans-2-enoyl-CoA reductase [Polysphondylium pallidum PN500] >gi|281202738|gb|EFA76940.1| trans-2-enoyl-CoA reductase [Polysphondylium pallidum PN500]) HSP 1 Score: 158.303 bits (399), Expect = 1.238e-41 Identity = 115/366 (31.42%), Postives = 177/366 (48.36%), Query Frame = 0
Query: 4 LINQAHFLGASPYIQEQYPSMASSRLVMASLLGRKGPARLRPPGATVAAACRGLSTAAGALADNEVALSILAAPVTAMDVGKKNPT-----------GVEGVGVVTAVGSKVRGFAVHDWAVP--TSGSVPTFCSAAKAKENELAKVPSDIPVEFAACMG-TALTALRLL---AGLKKGDFVLQADADSPVGLAVVQIAQARGVGTINIVVDGPGFWDKISLIKDLGGDVVVSDTYAREDPGFSSIMGELPKPTLALAAT--EAGVALASKCGGGAKVVNH------------------NTGGSGLL----------KASAAEIEAAAGLFRSEALQLWVERHPYSDLSVALKEAAEPFKTRRVVL 322
++N + GAS +++ AS+ +V S GR P + + GA ++V + ++ AP+ +D+ T G EGVG+V VGS V+G +D+ VP +S T+ + E +L KVPSDIP E+ + + TALRLL LK GD ++Q A S VGL+V+QIA++RGV TIN++ GP F D++ +K LGGD+VV + Y R P F ++ +LP+P LAL A ++ LA G +V + N G + A + L R++ L+LW+E+H +SD AL + EP K R+++L
Sbjct: 5 IVNSSVLRGASGFVR----PFASATVVKYSSFGR--------PEEVLKVEKDNVPDNVGA---SDVLVEMIHAPIHPVDINLAEGTYGIRPKLPSVAGTEGVGIVKKVGSSVQGLKPNDYVVPVISSSIAGTWRTQGVFGEKQLQKVPSDIPTEYLSAVSINPCTALRLLDDYVQLKSGDVIIQNAASSMVGLSVIQIAKSRGVKTINVIRRGPDFDDQVQRLKGLGGDIVVDEDYVRS-PEFQRLISDLPRPRLALNAVGGDSATELARVLGDNGHLVTYGGMSRRPVTIPTSHLVFRNITSHGFWLTKWLETHSQQERQAMFDTVFSLIRNKQLKLWLEKHKFSDFQGALARSQEPAKGRKIIL 354
BLAST of EWM25135.1 vs. NCBI_GenBank
Match: gi|831778465|ref|XP_012755419.1| (hypothetical protein SAMD00019534_044750 [Acytostelium subglobosum LB1] >gi|735856051|dbj|GAM21300.1| hypothetical protein SAMD00019534_044750 [Acytostelium subglobosum LB1]) HSP 1 Score: 156.377 bits (394), Expect = 6.113e-41 Identity = 108/311 (34.73%), Postives = 163/311 (52.41%), Query Frame = 0
Query: 59 TAAGALADNEVALSILAAPVTAMDVGKKNPT-----------GVEGVGVVTAVGSKVRGFAVHDWAVP--TSGSVPTFCSAAKAKENELAKVPSDIPVEFAACMG-TALTALRLL---AGLKKGDFVLQADADSPVGLAVVQIAQARGVGTINIVVDGPGFWDKISLIKDLGGDVVVSDTYAREDPGFSSIMGELPKPTLALAAT--EAGVALASKCGGGAKVVNHNTGG--------SGLL----------------KASAAEIEAA----AGLFRSEALQLWVERHPYSDLSVALKEAAEPFKTRRVVL 322
A + NEV + ++ AP+ +D+ T G EGVG+V VG+ V+G ++D+ VP +S T+ + E +L KVPSDIP E+ + + TALRLL LK GD V+Q A S VGL+++QIA++RG+ TIN+V P + ++++L+K LG D+VV D Y R P F+ ++ +LP+P LAL A ++ LA G G +V + + S L+ K SA E +A L RS+ L+LW+E+H +SD AL + E K R++VL
Sbjct: 44 NVADNVTSNEVLVEMIHAPIHPVDINLAEGTYGIRPKLPSIAGTEGVGIVKKVGAGVQGLKLNDYVVPLLSSTVAGTWRTQGVFSEKQLQKVPSDIPTEYLSAVSINPCTALRLLDDYVTLKAGDVVIQNAASSMVGLSLIQIAKSRGIKTINVVSRSPDYDEQVTLLKGLGADIVVDDEYIRT-PEFARLIADLPRPRLALNAVGGQSATELARVLGDGGHLVTYGSMSRRAVTVPTSHLVFRDITVHGFWLTRWIEKHSAQERQAMFDTIFSLIRSKHLKLWLEKHKFSDFQGALARSQERGKGRKIVL 353
BLAST of EWM25135.1 vs. NCBI_GenBank
Match: gi|470271307|ref|XP_004362847.1| (trans-2-enoyl-CoA reductase [Dictyostelium fasciculatum] >gi|328876633|gb|EGG24996.1| trans-2-enoyl-CoA reductase [Dictyostelium fasciculatum]) HSP 1 Score: 153.295 bits (386), Expect = 1.252e-39 Identity = 106/311 (34.08%), Postives = 160/311 (51.45%), Query Frame = 0
Query: 59 TAAGALADNEVALSILAAPVTAMDVG----------KKNPT-GVEGVGVVTAVGSKVRGFAVHDWAVP--TSGSVPTFCSAAKAKENELAKVPSDIPVEF-AACMGTALTALRLL---AGLKKGDFVLQADADSPVGLAVVQIAQARGVGTINIVVDGPGFWDKISLIKDLGGDVVVSDTYAREDPGFSSIMGELPKPTLALAAT--EAGVALASKCGGGAKVVNH------------------NTGGSGLL------KASAAEI----EAAAGLFRSEALQLWVERHPYSDLSVALKEAAEPFKTRRVVL 322
A ++ NEV + ++ AP+ +D+ K N G EGVG+V VG+ V+G +D+ VP +S T+ + E +L KVP+DIP E+ +A TA RLL A LK GD V+Q A S VGL+V+Q+ +ARG+ TINI+ + + + +K LGGD+VVS+ Y R P ++ ++ +LP+P LAL A ++ LA G +V + N G + S AEI E GL R + L+LW+E+H +SD + AL + EP K R+++L
Sbjct: 59 NVADNVSANEVLVEMIHAPIHPVDINLAEGTYGVKAKTNSVAGSEGVGIVKKVGTSVQGLKPNDYVVPILSSSVAGTWRTQGVFSEKQLYKVPADIPTEYLSAVTINPCTAYRLLEDFAKLKAGDVVIQNGASSMVGLSVIQMCKARGIKTINIIRRSSDYDETVDRLKKLGGDIVVSEEYVRT-PEYARLVADLPRPRLALNAVGGDSATELARNVADGGALVTYGGMSRRPVTVPTAHLIFRNVSVHGFWLTRWVEQHSQAEISAMYEHIFGLIRDKKLKLWLEKHKFSDFNNALLRSQEPGKGRKIIL 368
BLAST of EWM25135.1 vs. NCBI_GenBank
Match: gi|330840567|ref|XP_003292285.1| (hypothetical protein DICPUDRAFT_50320 [Dictyostelium purpureum] >gi|325077487|gb|EGC31196.1| hypothetical protein DICPUDRAFT_50320 [Dictyostelium purpureum]) HSP 1 Score: 150.214 bits (378), Expect = 9.331e-39 Identity = 97/306 (31.70%), Postives = 154/306 (50.33%), Query Frame = 0
Query: 63 ALADNEVALSILAAPVTAMDV-------GKKNPT----GVEGVGVVTAVGSKVRGFAVHDWAVPTSGS-VPTFCSAAKAKENELAKVPSDIPVEFAACMG----TALTALRLLAGLKKGDFVLQADADSPVGLAVVQIAQARGVGTINIVVDGPGFWDKISLIKDLGGDVVVSDTYAREDPGFSSIMGELPKPTLALAAT--EAGVALASKCGGGAKVVNH------------------NTGGSGL----------LKASAAEIEAAAGLFRSEALQLWVERHPYSDLSVALKEAAEPFKTRRVVL 322
A+ +++ + +L AP+ D+ G P G+EGVG+V VG++V GF +D +P+ S ++ + KE +L K P+DIP E+ A + TA L+ L++GD ++Q A+S VGL+VVQIA++RG+ TIN++ +GP F D ++ IK LGGD+VVSD Y R P F ++ +LP+P LAL A + L G +V + N G L I L+R + +L +E+H +SD AL+++ + R++VL
Sbjct: 41 AVKGSDILVEMLHAPINPADINLIKGTYGTSVPVSSVAGMEGVGIVKNVGNQVSGFKENDIVIPSLNSHFGSWRTQGLFKEKDLIKAPADIPAEYLATVSINPTTAYILLKDFVNLQEGDVIIQNAANSMVGLSVVQIAKSRGIKTINVIRNGPDFEDNVNRIKKLGGDIVVSDKYIRT-PAFQRLIADLPRPKLALNAVGGASATELVRILGDNGTIVTYGGMSREPVVIPTSHLVFRNIKSQGFWLNRWISENSLADRTKIINNIFDLYRKQNFKLMIEKHKFSDFEAALEKSQQGGNGRKIVL 345
BLAST of EWM25135.1 vs. NCBI_GenBank
Match: gi|1013948891|gb|KYR02553.1| (trans-2-enoyl-CoA reductase [Dictyostelium lacteum]) HSP 1 Score: 141.354 bits (355), Expect = 2.606e-35 Identity = 102/306 (33.33%), Postives = 156/306 (50.98%), Query Frame = 0
Query: 64 LADNEVALSILAAPVTAMDVGKKNPT-----------GVEGVGVVTAVGSKVRGFAVHDWAVP--TSGSVPTFCSAAKAKENELAKVPSDIPVEFAACMG-TALTALRLL---AGLKKGDFVLQADADSPVGLAVVQIAQARGVGTINIVVDGPGFWDKISLIKDLGGDVVVSDTYAREDPGFSSIMGELPKPTLA------LAATEAGVALASK-----CGGGAK-----------VVNHNTGGSGLLKASAAEIEAAAG--------LFRSEALQLWVERHPYSDLSVALKEAAEPFKTRRVVL 322
L EV + ++ AP+ +D + T G EGVGVV VGSKV+ +D VP +S V T+ + E + KVPSDIP E+ A + TA RLL L+ GD ++Q + VGL+V+Q+A+A+GV TIN++ +G +++ L+K LGGD+VV++ Y R F ++ +LPKP LA L+ATE LA GG ++ N + G L ++ EA + RS++L+L++E+H +SD AL + EP K R+++L
Sbjct: 45 LQPQEVLIEMIHAPINPVDFNLASGTYGFQPKLPSVAGSEGVGVVKKVGSKVQQLKANDLVVPVISSQVVGTWRTKGVFNEKQFHKVPSDIPAEYLASVSINPTTAYRLLEDFVKLQAGDVIIQNASSGMVGLSVIQMAKAKGVKTINVIRNGADHDEQVELLKGLGGDIVVTEDYIRTQ-AFQKLISDLPKPKLALNAVGGLSATELARILADNGTLVTYGGMSREPVIIPTSHLIFRNIQSKGFWLNNWYSSHTEAERQEMFDKIFTMIRSKSLKLYIEKHKFSDFESALIRSQEPGKGRKILL 349
BLAST of EWM25135.1 vs. NCBI_GenBank
Match: gi|470515658|ref|XP_004352955.1| (oxidoreductase, zincbinding dehydrogenase, putative [Acanthamoeba castellanii str. Neff] >gi|440802498|gb|ELR23427.1| oxidoreductase, zincbinding dehydrogenase, putative [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 138.272 bits (347), Expect = 5.699e-34 Identity = 104/306 (33.99%), Postives = 146/306 (47.71%), Query Frame = 0
Query: 64 LADNEVALSILAAPVTAMD---------VGKKNPT--GVEGVGVVTAVGSKVRGFAVHDWAVPTSGSVPTFCSAAKAKENELAKVPSDIPVEFAACMG-TALTALRLL---AGLKKGDFVLQADADSPVGLAVVQIAQARGVGTINIVVDGPGFWDKISLIKDLGGDVVVSDTYAREDPGFSSIMGELPKPTLAL------AATEAGVALASKC-----GGGAK---------VVNHNTGGSGLLKASAAE----------IEAAAGLFRSEALQLWVERHPYSDLSVALKEAAEPFKTRRVVLVM 324
+ DN+V + LAAP+ D +G K P G EGV V AVGSKV+G AV DW +P T+ + A A E+ L KV DI E+AA + TA RLL A LK GD ++Q A+S VG AV+Q+A R V TINI+ D P D + +K G +VV++ P F ++ +LPKP L L +ATE L GG ++ ++ N G + E I L +S+ L++W ER+P D + AL + + R+ +LVM
Sbjct: 63 VGDNDVLVGFLAAPINPADLNMVEGVYPIGPKAPAVGGNEGVAEVLAVGSKVKGIAVDDWVIPAKPGFGTWRTHAVAPESSLLKVKKDIKPEYAAAIAVNPCTAYRLLNDFADLKPGDVIIQNGANSAVGQAVIQLAAQREVKTINIIRDRPDLGDTVERMKSYGAYMVVTEDKL-GTPAFHRLISDLPKPKLGLNCVGGTSATEIARVLEKDSTLVTYGGMSRKPVQVPTSLLIFRNIQLRGFWLSRWVEEHSAEERLAMINTCWDLVKSKRLRMWAERYPLEDFAAALNRTTQAQRNRKAILVM 367
BLAST of EWM25135.1 vs. NCBI_GenBank
Match: gi|66816217|ref|XP_642118.1| (trans-2-enoyl-CoA reductase [Dictyostelium discoideum AX4] >gi|74856794|sp|Q54YT4.1|MECR_DICDI RecName: Full=Enoyl-[acyl-carrier-protein] reductase, mitochondrial; AltName: Full=2-enoyl thioester reductase; Flags: Precursor >gi|60470240|gb|EAL68220.1| trans-2-enoyl-CoA reductase [Dictyostelium discoideum AX4]) HSP 1 Score: 137.117 bits (344), Expect = 9.041e-34 Identity = 105/348 (30.17%), Postives = 166/348 (47.70%), Query Frame = 0
Query: 24 MASSRLVMASLLGRKGPAR---LRPPGATVAAACRGLSTAAGALADNEVALSILAAPVTAMDVGKKNPT-----------GVEGVGVVTAVGSKVRGFAVHDWAVPT-SGSVPTFCSAAKAKENELAKVPSDIPVEFAACMG----TALTALRLLAGLKKGDFVLQADADSPVGLAVVQIAQARGVGTINIVVDGPGFWDKISLIKDLGGDVVVSDTYAREDPGFSSIMGELPKPTLAL------AATEAGVALASK----CGGG----------AKVVNHNTGGSGLLKASAAE----------IEAAAGLFRSEALQLWVERHPYSDLSVALKEAAEPFKTRRVVL 322
M S+R ++ SL+ R +R + G+ A +++ +V + +L AP+ D+ T G+EGVGVV VGS V G +D VP+ ++ S E +L KVPSDIP E+ + + TA L L++GD ++Q ++S VGL+V+Q+A+ARG+ TIN++ DG F D + +K LGGD+VVS+ Y R P F ++ +LP P LAL +ATE LA GG ++++ N G E +A L R + +L +E+H +S+ AL ++ + R++VL
Sbjct: 1 MNSTRNII-SLVRRYSTSRSVKIASHGSPSTALKIENENITDKISNKDVLVEMLHAPINPADLNIIQGTYGTNVQVGGVAGMEGVGVVKKVGSGVTGLKENDLVVPSMKQHFGSWRSKGVWSEQQLFKVPSDIPTEYLSTISINPTTAYLLLNDFVKLQQGDVIIQNASNSMVGLSVIQLAKARGIKTINVIRDGSEFEDNVQRLKQLGGDIVVSEEYVRT-PAFRKLISDLPSPKLALNAVGGQSATELSRILADNGTLVTYGGMSREPVTIPTSQLIFRNIQIRGFWLNKWFEQHTDSEKQSVYDAIFDLIRKKQFKLLIEKHKFSEFDQALLKSQQSGHGRKIVL 346
BLAST of EWM25135.1 vs. NCBI_GenBank
Match: gi|299471239|emb|CBN79094.1| (Trans-2-enoyl-CoA reductase, mitochondrial precursor [Ectocarpus siliculosus]) HSP 1 Score: 132.494 bits (332), Expect = 5.181e-32 Identity = 102/311 (32.80%), Postives = 153/311 (49.20%), Query Frame = 0
Query: 64 LADNEVALSILAAPVTAMDVGKKNPT-----------GVEGVGVVTAVGSKVRGFAVHDWAVPT-SGSVPTFCSAAKAKENELAKVPSDIPVEFAACMG----TALTALRLLAGLKKGDFVLQADADSPVGLAVVQIAQARGVGTINIVVDGPGFWDKISLIKDLGGDVVVSDTYAREDPGFSSIMGELPKPTLALAATEAGVA--LASKCGGGAKVVNHNTGGSGL------------------------------LKASAAEIEAAAGLFRSEALQLWVERHPYSDLSVALKEAAEPFKTRRVVLVMSE 326
L EVA+ +L AP+ D+ + + G EGVG VTAVGS V AV DWAVP + T+ + KA + L K PSDIP E+AA +G TA LR L++GD V+Q A+S VG+AV+Q+A+ GV TIN+V + P + + L+K LG DVVV+ ++ + LP P L L +A +A + ++++ GG L + A I A + +S L+ ++ERH ++ S A+KEA +P+++R+V+L MS
Sbjct: 45 LGPREVAVKMLFAPINPSDINQVEGSYGVLPPLPAVGGNEGVGEVTAVGSDVTRLAVGDWAVPMPAAGFGTWRNVGKADVSMLQKCPSDIPAEYAATIGVNPCTAYRLLRDFETLREGDTVIQNGANSQVGVAVIQMARDMGVRTINVVRERPPGDNTVELLKSLGADVVVTPAVLGVPDDYAEAVAGLPPPRLGLNCVGGSIATSVAKQLDDSGALISY--GGMSLRPITLPATILQDKGVRCDGFWITRWTQDRPREEREAMIADVAKMIKSGRLRSFLERHRFTQFSQAMKEARKPYRSRKVLLDMSR 353
BLAST of EWM25135.1 vs. NCBI_GenBank
Match: gi|970645006|gb|KUF85626.1| (hypothetical protein AM588_10000962 [Phytophthora nicotianae]) HSP 1 Score: 124.79 bits (312), Expect = 4.078e-29 Identity = 108/308 (35.06%), Postives = 150/308 (48.70%), Query Frame = 0
Query: 62 GALADNEVALSILAAPVTAMDVGK---------KNPT--GVEGVGVVTAVGSKVRGFAVHDWAVPTSGSVPTFCSAAKAKENELAKVPSDIPVEFAACMGTA-LTALRLLAG---LKKGDFVLQADADSPVGLAVVQIAQARGVGTINIVVDGPGFWDKISLIKDLGGDVVVSDTYAREDPGFSSIMGELPKPTLAL------AATEAGVALASK-----CGGGAK---------VVNHNTGGSGL-----LKASAAEIEAA-----AGLFRSEALQLWVERHPYSDLSVALKEAAEPFKTRRVVLVM 324
GA A +VAL LAAP+ D+ + K P G EGV VVTAVGS V V+D +PT+ T+ S A A ++ K+ I VE AA + TA R+LA L KGD V+Q A+S VG AV+Q+A RG+ TINI+ D + + +K LG D+V + YA F ++ +LP P LAL + E ALA K GG +K ++ H+ G +K S E AA AGL + L+ W++ + + D AL+ A R+VVL+M
Sbjct: 43 GAPAQGQVALKFLAAPINVADLSQIQGAYAIKPKFPAVAGNEGVAVVTAVGSGVTNVKVNDRVIPTAAGFGTWRSKAVADSADVMKISDKIKVEDAATLAVNPATAYRMLADFTTLNKGDVVIQNGANSAVGQAVIQLAALRGIKTINIIRDDGDYDVTVEHLKSLGADIVCTADYAGS-AKFKELISDLPAPKLALNCVGGKTSLEMAKALAKKGVHVTYGGMSKEAVAVGTGSLIFHDITLKGFWLSQWVKDSTVEERAAMLSELAGLVEAGKLRSWIQTYKFEDFDDALQAAVARTTKRKVVLLM 349 The following BLAST results are available for this feature:
BLAST of EWM25135.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|