EWM25161.1, cds5567 (CDS) Nannochloropsis gaditana

Overview
NameEWM25161.1
Unique Namecds5567
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:335414..335698 +
Alignment locationCM002466.1:335942..336375 +
Alignment locationCM002466.1:336668..337067 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25161.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100016g25.2970.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:335414..335698 +
CM002466.1supercontigCM002466.1:335942..336375 +
CM002466.1supercontigCM002466.1:336668..337067 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR001737KsgA/Erm
Homology
BLAST of EWM25161.1 vs. NCBI_GenBank
Match: gi|585106799|gb|EWM25161.1| (hypothetical protein Naga_100016g25 [Nannochloropsis gaditana])

HSP 1 Score: 773.467 bits (1996), Expect = 0.000e+0
Identity = 372/372 (100.00%), Postives = 372/372 (100.00%), Query Frame = 0
Query:    1 MAETAASIPQISRLEYGRDPEGKELLVMRTLQSHERGKKHAGMERSGKPRDDDGIVPAPEALQPYLGTNTIVMMEWEKEYMEKLVEALNVQADDEVLEIGWGLGYSAAAIQRRRPRRHVIIECDTGVLERAKLWKESVEHSWRKEDQSARKESGSHNEGRPEEGESNKKQQTRETDSFERCIVLVHAFWQQALPSMDMFTAVLMDDFPLPLLGPEAENESRVLASTGGSRWHHFLDLVVSYHLRPGGRVTGYLSRDLDLCRADCTYTRCPVEVVVPTNCNYATPGRQTYFVPLLTRNRIGGEHQRGEEVGVAVGCSHIITGRARGDAAITAECYQNKRRKEDEWDEIDTPYMCKAARKRRCMLRHLLEAQKC 372
            MAETAASIPQISRLEYGRDPEGKELLVMRTLQSHERGKKHAGMERSGKPRDDDGIVPAPEALQPYLGTNTIVMMEWEKEYMEKLVEALNVQADDEVLEIGWGLGYSAAAIQRRRPRRHVIIECDTGVLERAKLWKESVEHSWRKEDQSARKESGSHNEGRPEEGESNKKQQTRETDSFERCIVLVHAFWQQALPSMDMFTAVLMDDFPLPLLGPEAENESRVLASTGGSRWHHFLDLVVSYHLRPGGRVTGYLSRDLDLCRADCTYTRCPVEVVVPTNCNYATPGRQTYFVPLLTRNRIGGEHQRGEEVGVAVGCSHIITGRARGDAAITAECYQNKRRKEDEWDEIDTPYMCKAARKRRCMLRHLLEAQKC
Sbjct:    1 MAETAASIPQISRLEYGRDPEGKELLVMRTLQSHERGKKHAGMERSGKPRDDDGIVPAPEALQPYLGTNTIVMMEWEKEYMEKLVEALNVQADDEVLEIGWGLGYSAAAIQRRRPRRHVIIECDTGVLERAKLWKESVEHSWRKEDQSARKESGSHNEGRPEEGESNKKQQTRETDSFERCIVLVHAFWQQALPSMDMFTAVLMDDFPLPLLGPEAENESRVLASTGGSRWHHFLDLVVSYHLRPGGRVTGYLSRDLDLCRADCTYTRCPVEVVVPTNCNYATPGRQTYFVPLLTRNRIGGEHQRGEEVGVAVGCSHIITGRARGDAAITAECYQNKRRKEDEWDEIDTPYMCKAARKRRCMLRHLLEAQKC 372          
BLAST of EWM25161.1 vs. NCBI_GenBank
Match: gi|1173943596|gb|OQR92428.1| (hypothetical protein THRCLA_08710 [Thraustotheca clavata])

HSP 1 Score: 155.992 bits (393), Expect = 2.054e-41
Identity = 91/228 (39.91%), Postives = 119/228 (52.19%), Query Frame = 0
Query:   72 VMMEWEKEYMEKLVEALNVQADDEVLEIGWGLGYSAAAIQRRRPRRHVIIECDTGVLERAKLWKESVEHSWRKEDQSARKESGSHNEGRPEEGESNKKQQTRETDSFERCIVLVHAFWQQALPSMDMFTAVLMDDFPLPLLGPEAENESRVLASTGGSRWHHFLDLVVSYHLRPGGRVTGYLSRDLDLCRADCTYTRCPVEVVVPTNCNYATPGRQTYFVPLLTRNRI 299
            VMM WE+EYME+ V+AL +    +VLEIG+GLGYSA  I + RPR + IIECD  VLER  LW    ++                                         + +V   WQ  L S+  F  V  DD+PLP      +NE R  +    SRW+ FLD V+++H + GGRVTGYL+R+LD  R  C+ T  P+EV VP NCNY  P +Q   VPL+T N +
Sbjct:   23 VMMAWEREYMEQCVDALCISNSCDVLEIGFGLGYSATHIMKYRPRTYTIIECDPVVLERIHLWASDYDN-----------------------------------------VFIVAGTWQTQLCSLAKFDCVFFDDYPLP------QNE-RDFSCFTISRWYEFLDSVLNWHTKLGGRVTGYLARELDFTRPGCSVTLRPIEVQVPLNCNYF-PYKQA-LVPLVTLNEL 200          
BLAST of EWM25161.1 vs. NCBI_GenBank
Match: gi|566015649|gb|ETI38560.1| (hypothetical protein F443_15718, partial [Phytophthora parasitica P1569] >gi|567981791|gb|ETL32227.1| hypothetical protein L916_15151, partial [Phytophthora parasitica] >gi|568011272|gb|ETL85450.1| hypothetical protein L917_14981, partial [Phytophthora parasitica] >gi|570319386|gb|ETO67334.1| hypothetical protein F444_15696, partial [Phytophthora parasitica P1976] >gi|570974037|gb|ETP36512.1| hypothetical protein F442_15552, partial [Phytophthora parasitica P10297])

HSP 1 Score: 149.058 bits (375), Expect = 3.118e-38
Identity = 89/224 (39.73%), Postives = 116/224 (51.79%), Query Frame = 0
Query:   72 VMMEWEKEYMEKLVEALNVQADDEVLEIGWGLGYSAAAIQRRRPRRHVIIECDTGVLERAKLWKESVEHSWRKEDQSARKESGSHNEGRPEEGESNKKQQTRETDSFERCIVLVHAFWQQALPSMDMFTAVLMDDFPLPLLGPEAENESRVLASTGGSRWHHFLDLVVSYHLRPGGRVTGYLSRDLDLCRADCTYTRCPVEVVVPTNCNYATPGRQTYFVPLLT 295
            VMM+WEK+YME+ V+AL +Q  D VLEIG+GL YSA  IQR RPR H IIECD   L+R                  AR+ + SH+  +   G                        WQQ LP+++ F  V  DD+PLP L     + +   AS   SRWH FLD+ +  H   G R++GYL+R LDL R  C  T   V+V VP +CNY     +T  VP++T
Sbjct:   28 VMMQWEKQYMERCVDALAIQPTDRVLEIGFGLAYSATHIQRFRPRSHTIIECDQETLQR------------------ARRFATSHSGVKIAAGT-----------------------WQQVLPTLNQFDCVFFDDYPLPELEVGGADGA---ASRQRSRWHDFLDVALK-HCTTGARISGYLARKLDLQRPGCQVTISIVQVDVPEHCNYFP--HKTALVPVIT 204          
BLAST of EWM25161.1 vs. NCBI_GenBank
Match: gi|970635343|gb|KUF80245.1| (Guanidinoacetate N-methyltransferase [Phytophthora nicotianae])

HSP 1 Score: 149.058 bits (375), Expect = 3.272e-38
Identity = 89/224 (39.73%), Postives = 116/224 (51.79%), Query Frame = 0
Query:   72 VMMEWEKEYMEKLVEALNVQADDEVLEIGWGLGYSAAAIQRRRPRRHVIIECDTGVLERAKLWKESVEHSWRKEDQSARKESGSHNEGRPEEGESNKKQQTRETDSFERCIVLVHAFWQQALPSMDMFTAVLMDDFPLPLLGPEAENESRVLASTGGSRWHHFLDLVVSYHLRPGGRVTGYLSRDLDLCRADCTYTRCPVEVVVPTNCNYATPGRQTYFVPLLT 295
            VMM+WEK+YME+ V+AL +Q  D VLEIG+GL YSA  IQR RPR H IIECD   L+R                  AR+ + SH+  +   G                        WQQ LP+++ F  V  DD+PLP L     + +   AS   SRWH FLD+ +  H   G R++GYL+R LDL R  C  T   V+V VP +CNY     +T  VP++T
Sbjct:   26 VMMQWEKQYMERCVDALAIQPTDRVLEIGFGLAYSATHIQRFRPRSHTIIECDQETLQR------------------ARRFATSHSGVKIAAGT-----------------------WQQVLPTLNQFDCVFFDDYPLPELEVGGADGA---ASRQRSRWHDFLDVALK-HCTTGARISGYLARKLDLQRPGCQVTISIVQVDVPEHCNYFP--HKTALVPVIT 202          
BLAST of EWM25161.1 vs. NCBI_GenBank
Match: gi|568041209|gb|ETM38628.1| (hypothetical protein L914_15115, partial [Phytophthora parasitica])

HSP 1 Score: 149.058 bits (375), Expect = 3.320e-38
Identity = 89/224 (39.73%), Postives = 116/224 (51.79%), Query Frame = 0
Query:   72 VMMEWEKEYMEKLVEALNVQADDEVLEIGWGLGYSAAAIQRRRPRRHVIIECDTGVLERAKLWKESVEHSWRKEDQSARKESGSHNEGRPEEGESNKKQQTRETDSFERCIVLVHAFWQQALPSMDMFTAVLMDDFPLPLLGPEAENESRVLASTGGSRWHHFLDLVVSYHLRPGGRVTGYLSRDLDLCRADCTYTRCPVEVVVPTNCNYATPGRQTYFVPLLT 295
            VMM+WEK+YME+ V+AL +Q  D VLEIG+GL YSA  IQR RPR H IIECD   L+R                  AR+ + SH+  +   G                        WQQ LP+++ F  V  DD+PLP L     + +   AS   SRWH FLD+ +  H   G R++GYL+R LDL R  C  T   V+V VP +CNY     +T  VP++T
Sbjct:   28 VMMQWEKQYMERCVDALAIQPTDRVLEIGFGLAYSATHIQRFRPRSHTIIECDQETLQR------------------ARRFATSHSGVKIAAGT-----------------------WQQVLPTLNQFDCVFFDDYPLPELEVGGADGA---ASRQRSRWHDFLDVALK-HCTTGARISGYLARKLDLQRPGCQVTISIVQVDVPEHCNYFP--HKTALVPVIT 204          
BLAST of EWM25161.1 vs. NCBI_GenBank
Match: gi|675172771|ref|XP_008895270.1| (hypothetical protein PPTG_04741 [Phytophthora parasitica INRA-310] >gi|568104773|gb|ETN19418.1| hypothetical protein PPTG_04741 [Phytophthora parasitica INRA-310])

HSP 1 Score: 149.058 bits (375), Expect = 3.558e-38
Identity = 89/224 (39.73%), Postives = 116/224 (51.79%), Query Frame = 0
Query:   72 VMMEWEKEYMEKLVEALNVQADDEVLEIGWGLGYSAAAIQRRRPRRHVIIECDTGVLERAKLWKESVEHSWRKEDQSARKESGSHNEGRPEEGESNKKQQTRETDSFERCIVLVHAFWQQALPSMDMFTAVLMDDFPLPLLGPEAENESRVLASTGGSRWHHFLDLVVSYHLRPGGRVTGYLSRDLDLCRADCTYTRCPVEVVVPTNCNYATPGRQTYFVPLLT 295
            VMM+WEK+YME+ V+AL +Q  D VLEIG+GL YSA  IQR RPR H IIECD   L+R                  AR+ + SH+  +   G                        WQQ LP+++ F  V  DD+PLP L     + +   AS   SRWH FLD+ +  H   G R++GYL+R LDL R  C  T   V+V VP +CNY     +T  VP++T
Sbjct:   26 VMMQWEKQYMERCVDALAIQPTDRVLEIGFGLAYSATHIQRFRPRSHTIIECDQETLQR------------------ARRFATSHSGVKIAAGT-----------------------WQQVLPTLNQFDCVFFDDYPLPELEVGGADGA---ASRQRSRWHDFLDVALK-HCTTGARISGYLARKLDLQRPGCQVTISIVQVDVPEHCNYFP--HKTALVPVIT 202          
BLAST of EWM25161.1 vs. NCBI_GenBank
Match: gi|567953138|gb|ETK78797.1| (hypothetical protein L915_15260, partial [Phytophthora parasitica])

HSP 1 Score: 149.058 bits (375), Expect = 3.572e-38
Identity = 89/224 (39.73%), Postives = 116/224 (51.79%), Query Frame = 0
Query:   72 VMMEWEKEYMEKLVEALNVQADDEVLEIGWGLGYSAAAIQRRRPRRHVIIECDTGVLERAKLWKESVEHSWRKEDQSARKESGSHNEGRPEEGESNKKQQTRETDSFERCIVLVHAFWQQALPSMDMFTAVLMDDFPLPLLGPEAENESRVLASTGGSRWHHFLDLVVSYHLRPGGRVTGYLSRDLDLCRADCTYTRCPVEVVVPTNCNYATPGRQTYFVPLLT 295
            VMM+WEK+YME+ V+AL +Q  D VLEIG+GL YSA  IQR RPR H IIECD   L+R                  AR+ + SH+  +   G                        WQQ LP+++ F  V  DD+PLP L     + +   AS   SRWH FLD+ +  H   G R++GYL+R LDL R  C  T   V+V VP +CNY     +T  VP++T
Sbjct:   28 VMMQWEKQYMERCVDALAIQPTDRVLEIGFGLAYSATHIQRFRPRSHTIIECDQETLQR------------------ARRFATSHSGVKIAAGT-----------------------WQQVLPTLNQFDCVFFDDYPLPELEVGGADGA---ASRQRSRWHDFLDVALK-HCTTGARISGYLARKLDLQRPGCQVTISIVQVDVPEHCNYFP--HKTALVPVIT 204          
BLAST of EWM25161.1 vs. NCBI_GenBank
Match: gi|570943210|gb|ETP08467.1| (hypothetical protein F441_15538, partial [Phytophthora parasitica CJ01A1])

HSP 1 Score: 149.058 bits (375), Expect = 3.803e-38
Identity = 89/224 (39.73%), Postives = 116/224 (51.79%), Query Frame = 0
Query:   72 VMMEWEKEYMEKLVEALNVQADDEVLEIGWGLGYSAAAIQRRRPRRHVIIECDTGVLERAKLWKESVEHSWRKEDQSARKESGSHNEGRPEEGESNKKQQTRETDSFERCIVLVHAFWQQALPSMDMFTAVLMDDFPLPLLGPEAENESRVLASTGGSRWHHFLDLVVSYHLRPGGRVTGYLSRDLDLCRADCTYTRCPVEVVVPTNCNYATPGRQTYFVPLLT 295
            VMM+WEK+YME+ V+AL +Q  D VLEIG+GL YSA  IQR RPR H IIECD   L+R                  AR+ + SH+  +   G                        WQQ LP+++ F  V  DD+PLP L     + +   AS   SRWH FLD+ +  H   G R++GYL+R LDL R  C  T   V+V VP +CNY     +T  VP++T
Sbjct:   28 VMMQWEKQYMERCVDALAIQPTDRVLEIGFGLAYSATHIQRFRPRSHTIIECDQETLQR------------------ARRFATSHSGVKIAAGT-----------------------WQQVLPTLNQFDCVFFDDYPLPELEVGGADGA---ASRQRSRWHDFLDVALK-HCTTGARISGYLARKLDLQRPGCQVTISIVQVDVPEHCNYFP--HKTALVPVIT 204          
BLAST of EWM25161.1 vs. NCBI_GenBank
Match: gi|301106358|ref|XP_002902262.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262098882|gb|EEY56934.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 145.206 bits (365), Expect = 3.899e-38
Identity = 94/226 (41.59%), Postives = 114/226 (50.44%), Query Frame = 0
Query:   72 VMMEWEKEYMEKLVEALNVQADDEVLEIGWGLGYSAAAIQRRRPRRHVIIECDTGVLERAKLWKESVEHSWRKEDQSARKESGSHNEGRPEEGESNKKQQTRETDSFERCIVLVHAFWQQALPSMDMFTAVLMDDFPLPLLGPEAENESRVLASTGG--SRWHHFLDLVVSYHLRPGGRVTGYLSRDLDLCRADCTYTRCPVEVVVPTNCNYATPGRQTYFVPLLT 295
            VMM+WEKEYME  VE L +Q  D VLEIG+GL YSA  IQR RP+ H IIECD   L+RA+              Q A   SG                           + +V   WQQ LP +  F  V  DD+PLP L  E     RVL   GG  SRWH FLD+ +  H   G R+TGYL+R LDL R+ C  T   V+V VP +C Y     +T  VP++T
Sbjct:   26 VMMQWEKEYMELCVEGLAIQPTDRVLEIGFGLAYSATHIQRFRPKSHTIIECDEETLQRAR--------------QFAISHSG---------------------------VEIVAGTWQQQLPMLSQFDCVFFDDYPLPEL--EFGGPDRVL---GGQRSRWHDFLDVALK-HCTTGARITGYLARKLDLQRSGCQVTVSRVQVDVPGHCKYFP--HKTALVPVIT 202          
BLAST of EWM25161.1 vs. NCBI_GenBank
Match: gi|698813052|ref|XP_009839555.1| (hypothetical protein H257_13657 [Aphanomyces astaci] >gi|574105368|gb|ETV70892.1| hypothetical protein H257_13657 [Aphanomyces astaci])

HSP 1 Score: 144.821 bits (364), Expect = 7.317e-37
Identity = 83/224 (37.05%), Postives = 111/224 (49.55%), Query Frame = 0
Query:   72 VMMEWEKEYMEKLVEALNVQADDEVLEIGWGLGYSAAAIQRRRPRRHVIIECDTGVLERAKLWKESVEHSWRKEDQSARKESGSHNEGRPEEGESNKKQQTRETDSFERCIVLVHAFWQQALPSMDMFTAVLMDDFPLPLLGPEAENESRVLASTGGSRWHHFLDLVVSYHLRPGGRVTGYLSRDLDLCRADCTYTRCPVEVVVPTNCNYATPGRQTYFVPLLT 295
            VMM WE+EYMEK V+AL +    +VLEIG+GL YSA  IQ   P+ H IIECD   L   ++W ++                      RP                    +V+V   WQ  L S+  F  +  DD+PLP    + E +  + +    SRWH FLD  +++H+  GGRVTGYL+R++DL R  C     P EV VP NC Y     +T  VPL+T
Sbjct:   26 VMMAWEREYMEKCVDALGITPTSDVLEIGFGLAYSATHIQSYSPKSHTIIECDPVSLVELEVWAKT----------------------RPN-------------------VVIVAGTWQTVLASLGSFDCIFFDDYPLP----QTERDESIFSI---SRWHDFLDATLNWHVNVGGRVTGYLAREIDLSRDGCHVAMTPFEVQVPLNCTYF--PYKTALVPLVT 199          
The following BLAST results are available for this feature:
BLAST of EWM25161.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106799|gb|EWM25161.1|0.000e+0100.00hypothetical protein Naga_100016g25 [Nannochlorops... [more]
gi|1173943596|gb|OQR92428.1|2.054e-4139.91hypothetical protein THRCLA_08710 [Thraustotheca c... [more]
gi|566015649|gb|ETI38560.1|3.118e-3839.73hypothetical protein F443_15718, partial [Phytopht... [more]
gi|970635343|gb|KUF80245.1|3.272e-3839.73Guanidinoacetate N-methyltransferase [Phytophthora... [more]
gi|568041209|gb|ETM38628.1|3.320e-3839.73hypothetical protein L914_15115, partial [Phytopht... [more]
gi|675172771|ref|XP_008895270.1|3.558e-3839.73hypothetical protein PPTG_04741 [Phytophthora para... [more]
gi|567953138|gb|ETK78797.1|3.572e-3839.73hypothetical protein L915_15260, partial [Phytopht... [more]
gi|570943210|gb|ETP08467.1|3.803e-3839.73hypothetical protein F441_15538, partial [Phytopht... [more]
gi|301106358|ref|XP_002902262.1|3.899e-3841.59conserved hypothetical protein [Phytophthora infes... [more]
gi|698813052|ref|XP_009839555.1|7.317e-3737.05hypothetical protein H257_13657 [Aphanomyces astac... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5581rna5581Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications