EWM25162.1, cds5565 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25162.1 vs. NCBI_GenBank
Match: gi|585106800|gb|EWM25162.1| (bzip transcription factor [Nannochloropsis gaditana]) HSP 1 Score: 556.984 bits (1434), Expect = 0.000e+0 Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0
Query: 1 MDNAQRRSFPPIFSVFRKQTPSAFRSGSLPHQSTAAVTPTTDTRNVLTESDRREQRLARNRESARQSRRRKKENLENLSAKLGQSNMELEDLRHVIESNLRSQEDCTEDERQALRAYRFARLRCLLFPPHACFWMWLNRRACVWTQQASSSQRISAAKIGETLIQEKQEQESETTGWEAKDGQTLWPLLCFELQLKGEQEEQVKAILSQASEEMTQELEALQKMASAVGTLYKDLCVSSKRVDCTYEAVRGVLTRAQLQVLRRYAVDVPEAT 272
MDNAQRRSFPPIFSVFRKQTPSAFRSGSLPHQSTAAVTPTTDTRNVLTESDRREQRLARNRESARQSRRRKKENLENLSAKLGQSNMELEDLRHVIESNLRSQEDCTEDERQALRAYRFARLRCLLFPPHACFWMWLNRRACVWTQQASSSQRISAAKIGETLIQEKQEQESETTGWEAKDGQTLWPLLCFELQLKGEQEEQVKAILSQASEEMTQELEALQKMASAVGTLYKDLCVSSKRVDCTYEAVRGVLTRAQLQVLRRYAVDVPEAT
Sbjct: 1 MDNAQRRSFPPIFSVFRKQTPSAFRSGSLPHQSTAAVTPTTDTRNVLTESDRREQRLARNRESARQSRRRKKENLENLSAKLGQSNMELEDLRHVIESNLRSQEDCTEDERQALRAYRFARLRCLLFPPHACFWMWLNRRACVWTQQASSSQRISAAKIGETLIQEKQEQESETTGWEAKDGQTLWPLLCFELQLKGEQEEQVKAILSQASEEMTQELEALQKMASAVGTLYKDLCVSSKRVDCTYEAVRGVLTRAQLQVLRRYAVDVPEAT 272
BLAST of EWM25162.1 vs. NCBI_GenBank
Match: gi|553196245|ref|XP_005856299.1| (bzip transcription factor, partial [Nannochloropsis gaditana CCMP526] >gi|422292777|gb|EKU20079.1| bzip transcription factor, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 553.132 bits (1424), Expect = 0.000e+0 Identity = 270/272 (99.26%), Postives = 270/272 (99.26%), Query Frame = 0
Query: 1 MDNAQRRSFPPIFSVFRKQTPSAFRSGSLPHQSTAAVTPTTDTRNVLTESDRREQRLARNRESARQSRRRKKENLENLSAKLGQSNMELEDLRHVIESNLRSQEDCTEDERQALRAYRFARLRCLLFPPHACFWMWLNRRACVWTQQASSSQRISAAKIGETLIQEKQEQESETTGWEAKDGQTLWPLLCFELQLKGEQEEQVKAILSQASEEMTQELEALQKMASAVGTLYKDLCVSSKRVDCTYEAVRGVLTRAQLQVLRRYAVDVPEAT 272
MDNAQRRSFPPIFSVFRKQTPSAFRSGSLPHQSTAAVTPTTDTRNVLTESDRREQRLARNRESARQSRRRKKENLENLSAKLGQSNMELEDLRHVIESNLRSQEDCTEDERQALRAYRFARLRCLLFPPHACFWMWLNRRACVWTQQASSSQRISAAKIGETLIQEKQEQESETTGWEAKDGQTLWPLLCFELQLKGEQEEQVKAILSQASEE TQELEALQKMASAVGTLYKDLCVSSKRVDCTYEAVRGVLTRAQLQVLRRYAVD PEAT
Sbjct: 5 MDNAQRRSFPPIFSVFRKQTPSAFRSGSLPHQSTAAVTPTTDTRNVLTESDRREQRLARNRESARQSRRRKKENLENLSAKLGQSNMELEDLRHVIESNLRSQEDCTEDERQALRAYRFARLRCLLFPPHACFWMWLNRRACVWTQQASSSQRISAAKIGETLIQEKQEQESETTGWEAKDGQTLWPLLCFELQLKGEQEEQVKAILSQASEEKTQELEALQKMASAVGTLYKDLCVSSKRVDCTYEAVRGVLTRAQLQVLRRYAVDAPEAT 276
BLAST of EWM25162.1 vs. NCBI_GenBank
Match: gi|341604011|dbj|BAK53453.1| (bZIP transcription factor [Phaeodactylum tricornutum]) HSP 1 Score: 89.7373 bits (221), Expect = 1.450e-16 Identity = 71/223 (31.84%), Postives = 110/223 (49.33%), Query Frame = 0
Query: 8 SFPPIFSVFRKQTPSAFRSGSLPHQSTAAVTPTTDTRNVLTESDRREQRLARNRESARQSRRRKKENLENLSAKLGQSNMELEDLR--HVIESN---------------------LRSQEDCTEDERQALRAYRFARLRCLLFPPHACFWMWLNRRACVWTQQA-SSSQRISAAKIGETLIQEKQEQESETTGWEAKDGQTLWPLLCFELQLKGEQEEQVKAI 206
S P + S TP A +LP S + T T + T +RR++RL RNRESAR SRRR+K LE L K+ Q + ++ R HV ++N L + T E + +R+ +L+ L PP F +WL + V+ + ++S+R+SAA+IGE ++ ++ S + Q +WPLLC E+ L +QEE+V+A
Sbjct: 117 SVPVLVSAQHHPTPGA----ALPTASAPSGTALTVQKEP-TNRNRRQKRLERNRESARLSRRRRKHYLEVLEEKVTQLSHAMDRGRRAHVAQANRIRQSERHEIVQSGNVKHVVRLETALSRTSRENSVTQTFRWQQLKSLCLPPSTKFVLWLTLQNDVYFRGGRAASERLSAARIGERMLHSGNDKVSPS--------QAMWPLLCNEVGLSYDQEEKVRAF 326
BLAST of EWM25162.1 vs. NCBI_GenBank
Match: gi|219123547|ref|XP_002182084.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406685|gb|EEC46624.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 88.1965 bits (217), Expect = 3.878e-16 Identity = 71/226 (31.42%), Postives = 111/226 (49.12%), Query Frame = 0
Query: 8 SFPPIFSVFRKQTPSAFRSGSLPHQSTAAVTPTTDTRNV---LTESDRREQRLARNRESARQSRRRKKENLENLSAKLGQSNMELEDLR--HVIESN---------------------LRSQEDCTEDERQALRAYRFARLRCLLFPPHACFWMWLNRRACVWTQQA-SSSQRISAAKIGETLIQEKQEQESETTGWEAKDGQTLWPLLCFELQLKGEQEEQVKAI 206
S P + S TP A +LP ++A P+ V T +RR++RL RNRESAR SRRR+K LE L K+ Q + ++ R HV ++N L + T E + +R+ +L+ L PP F +WL + V+ + ++S+R+SAA+IGE ++ ++ S + Q +WPLLC E+ L +QEE+V+A
Sbjct: 117 SVPFVVSAQHHPTPGA----ALP-TASAPPLPSGTALTVQKEPTNRNRRQKRLERNRESARLSRRRRKHYLEVLEEKVTQLSHAMDRGRRAHVAQANRIRQSERHEIVQSGNVKHVVRLETALSRTSRENSVTQTFRWQQLKSLCLPPSTKFVLWLTLQNDVYFRGGRAASERLSAARIGERMLHSGNDKVSPS--------QAMWPLLCNEVGLSYDQEEKVRAF 329
BLAST of EWM25162.1 vs. NCBI_GenBank
Match: gi|1173949044|gb|OQR97118.1| (hypothetical protein ACHHYP_12692 [Achlya hypogyna]) HSP 1 Score: 78.1814 bits (191), Expect = 7.511e-13 Identity = 91/300 (30.33%), Postives = 138/300 (46.00%), Query Frame = 0
Query: 14 SVFRKQTPSAFR----SGSLPHQSTAAV------TPTTDTRNVLTESDRREQRLARNRESARQSRRRKKENLENLSAKLGQSNMELEDLR--HV-----IESNLRSQ-------------------EDCTE-----------------DERQALRAYRFARLRCLLFPPHACFWMWLNRRACVWTQQASSSQRISAAKIGETLIQEKQEQESETTGWEAKDGQTLWPLLCFELQLKGEQEEQVKAILSQASEEMTQELEALQKMASAVGTLYK---DLCVSSKRVDCTYEAVRGVLTRAQ 257
S + PS+FR S ++ STA+ +PT + T+ D+R++RLARNRESARQSRRRKK+ LE L K+ Q E++ R H+ S L++Q + TE +ER+A+ Y F +L LL PP+ F +W++ Q S +I A T K+ ES+ AK TLW L EL + EQEE++K+ ++++ T + E +K+A AV L + ++ S V +AV+ +LT Q
Sbjct: 68 SSIHNEQPSSFRAHHQSSNIDTASTASGEFDGPDSPTGGDNELDTDDDKRQRRLARNRESARQSRRRKKQYLELLEEKVAQLTEEIDATRGEHLESADKTLSTLKTQMVASLYEKLATLPPMASLGPELTEELRNGVKLMQERYGPHSEERRAVVNYHFQQLDNLLLPPYTRFLLWMS------IQDESFFSKIQPAVAAAT----KKASESDRKDSSAK-KDTLWAALSSELGMTYEQEEKIKSHY-KSTDSKTAKAER-RKIAMAVTYLNQLKTNMEERSAAVQTHADAVQSILTPEQ 354
BLAST of EWM25162.1 vs. NCBI_GenBank
Match: gi|325186598|emb|CCA21144.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 75.8702 bits (185), Expect = 5.237e-12 Identity = 78/283 (27.56%), Postives = 131/283 (46.29%), Query Frame = 0
Query: 25 RSGSLP----------HQSTAAVTPTTDTRNVLTESDRREQRLARNRESARQSRRRKKENLENLSAKLGQ---------------SNMELEDLRH-VIESNLRSQEDCTED-----------------------ERQALRAYRFARLRCLLFPPHACFWMWLNRRACVWTQQASSSQRISAAKIGETLIQEKQEQESETTGWEAKDGQTLWPLLCFELQLKGEQEEQVKAIL-SQASEEMTQELEALQKMASAVGTLYKDLCVSSKRVDCTYEAVRGVLTRAQ 257
RS SLP Q+ +++ + +T+ ++R++RLARNRESARQSRRRKK+ LE L K+ Q ++ LE++R +I+S L E +D ER+A++ Y F +L LL PP+ F +WL + + + R++ A G+ +++S T+ KD LWP L +L L EQ+E+++ + SQ + + E + A+ + L +L + V +A+ +LT +Q
Sbjct: 120 RSSSLPSFDEQDGEEMQQNNDSISSGGTSSKRVTD-EKRQRRLARNRESARQSRRRKKQYLELLEEKVEQLTDSIDVTRANHLENADQALENVRSTLIQSLLHQLESECDDVEIQKKLRQGVELLQNRFGPNSIERKAVKDYNFRQLDNLLLPPYCRFLLWL----SIQDESFFNEGRVANAPNGKVNGSSDSDKKSGTSSMIRKDA--LWPALVADLGLTYEQDEKIRFLYTSQGAIALKPERRRMAFAAAYLSRLKTNLEERAAVVQKHTDAIHSILTPSQ 395
BLAST of EWM25162.1 vs. NCBI_GenBank
Match: gi|673027724|ref|XP_008867823.1| (hypothetical protein H310_05004 [Aphanomyces invadans] >gi|574476596|gb|ETW03594.1| hypothetical protein H310_05004 [Aphanomyces invadans]) HSP 1 Score: 72.7886 bits (177), Expect = 4.888e-11 Identity = 57/201 (28.36%), Postives = 89/201 (44.28%), Query Frame = 0
Query: 48 TESDRREQRLARNRESARQSRRRKKENLENLSAKLGQ--SNMELEDLRHVIESN-----------------------------------------LRSQEDCTEDERQALRAYRFARLRCLLFPPHACFWMWLNRRACVWTQQASSSQRISAAKIGETLIQEKQEQESETTGWEAKDGQTLWPLLCFELQLKGEQEEQVKA 205
TE ++R +RL RNR SAR SRRRKK+ LE L K+ Q ++++ + H+ ++ L+ + +ERQAL Y F +L LL PP+ CF +W++ + + + + S+ K GE L Q K + KDG LW + E+ + EQEE++K
Sbjct: 109 TEDEKRRKRLERNRISARDSRRRKKQYLELLEEKVAQLTEDIDITRMEHLDTADKTITAVKAQMITSLYEKLAPLPPNAPLPADVEDELGQVAQLLKDRYGPNSEERQALIKYHFHQLDGLLLPPYTCFLLWMSLQDDAFFARTLQTPSSSSKKAGEALEQRKDGGK--------KDG--LWSSMSSEVAILYEQEEKIKG 299
BLAST of EWM25162.1 vs. NCBI_GenBank
Match: gi|1210519164|dbj|GAX21997.1| (hypothetical protein FisN_25Hh203 [Fistulifera solaris]) HSP 1 Score: 73.1738 bits (178), Expect = 5.770e-11 Identity = 64/238 (26.89%), Postives = 110/238 (46.22%), Query Frame = 0
Query: 52 RREQRLARNRESARQSRRRKKENLENLSAKLGQSNMELE----------------------------DLRHVIESNLRSQEDCTEDERQALRAYRFARLRCLLFPPHACFWMWLNRRACVWTQQA-SSSQRISAAKIGETLIQEKQEQESETTGWEAKDGQTLWPLLCFELQLKGEQEEQVKA---ILSQASEEMTQELEALQKMASAVGTLYKDLCVSSKRVDCTYEAVRGVLTRAQ 257
RR++RL RNRESAR SRRR+K+ LE L + Q + E++ D V+E L T + + + + +L+ + PP F +WL+ + + + ++S+R+SAA+IGE ++ ++ + Q++WPL C E+ L EQEE+V++ +L QA E A + +++ + + RV A + VL+ AQ
Sbjct: 101 RRQKRLERNRESARLSRRRRKQYLEVLEENVNQLSREVDRGRREHVSRAVWTIHQKRVGILTESPTIDKLEVLEKGLSR----TSHSLRVVNTFHWQQLQSFVLPPSTKFTLWLSLQNDAYFRGGRAASERLSAARIGERMLSAGTDKVTPL--------QSMWPLFCNEVGLSYEQEEKVRSYQRVLLQAPESWLHRHTAF-AAEKTMKSVHDAIEALTNRVGERENATQAVLSPAQ 325
BLAST of EWM25162.1 vs. NCBI_GenBank
Match: gi|635366362|emb|CCI45318.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 71.633 bits (174), Expect = 1.360e-10 Identity = 68/247 (27.53%), Postives = 117/247 (47.37%), Query Frame = 0
Query: 51 DRREQRLARNRESARQSRRRKKENLENLSAKLGQ---------------SNMELEDLRHVIESNL--RSQEDCTED----------------------ERQALRAYRFARLRCLLFPPHACFWMWLNRRACVWTQQASSSQRISAAKIGETLIQEKQEQESETTGWEAKDGQTLWPLLCFELQLKGEQEEQVKAIL-SQASEEMTQELEALQKMASAVGTLYKDLCVSSKRVDCTYEAVRGVLTRAQ 257
++R++RLARNRESARQSRRRKK+ LE L K+ Q ++ LE++R + +L + Q +C + ER+A++ Y F +L LL PP+ F +WL + + + R++ A G+ +++ T+ +KD LWP L +L L EQ+E+++ + SQ + + E + +A+ + L +L + V+ A+ +LT Q
Sbjct: 108 EKRQRRLARNRESARQSRRRKKQYLELLEEKVEQLTESIDVTRANHLENADQALENVRSTLIQSLVHQLQAECDDAEIQEKLRQGVELLQNRFGPNSLERKAIKDYNFRQLDNLLLPPYCRFLLWL----SIQDESFFNEGRVTNASNGKVNSASDSDKKPGTSSVLSKDA--LWPALVADLGLTYEQDEKLRFLYTSQEAIALKPERRRMAFVAAYLSRLNTNLEERATAVEKHTNAIHSILTPDQ 348
BLAST of EWM25162.1 vs. NCBI_GenBank
Match: gi|397622270|gb|EJK66630.1| (hypothetical protein THAOC_12443 [Thalassiosira oceanica]) HSP 1 Score: 71.633 bits (174), Expect = 2.048e-10 Identity = 66/226 (29.20%), Postives = 104/226 (46.02%), Query Frame = 0
Query: 52 RREQRLARNRESARQSRRRKKENLENLSAKLGQ-SNMELEDLRHVIES--------NLRSQEDCTEDE-----------------RQALRAYRFARLRCLLFPPHACFWMWL---------------NRRACVWTQQASSSQRISAAKIGETLIQEKQEQESETTGWEAKDGQTLWPLLCFELQLKGEQEEQVKAILSQASEEMTQELEA----LQKMASAVGTLY 232
+R QRLARNRESAR SRRRKKE L +LS K+ + NM ++R+ I++ ++ + D R+A+ A++F LR H + +W+ N ++ + R ++ +IGE L E++ + +A D WPL C E+ + EQEE+ I++QA EE Q+++ L KM AV T +
Sbjct: 418 KRAQRLARNRESARNSRRRKKEQLSSLSTKVKKLQNMLDVEIRNKIKTMEVGMARQRVKLLNNSVSDHNGAMASVFRLTSVNCPVRRAVLAHQFGSLRRAFIANHNQYAIWMMMHSSSFFTAAHNYKNDSLTASGRKNPGNARNNSKQIGEELANEEKFDGNAGATCDATDELRAWPLYCHEVVMTMEQEER---IINQAHEEF-QKIDNLPGRLNKMKLAVSTTH 639 The following BLAST results are available for this feature:
BLAST of EWM25162.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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