EWM25129.1, cds5564 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25129.1 vs. NCBI_GenBank
Match: gi|585106767|gb|EWM25129.1| (hypothetical protein Naga_100016g30 [Nannochloropsis gaditana]) HSP 1 Score: 645.58 bits (1664), Expect = 0.000e+0 Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0
Query: 1 MVELGDTYSYVHYIYDRITSITPEMKQVIIALGILTGVTEAFWLQPVKQSSRSHCRKLFAEEPSSSSVCDSSSRQGFLQTLAGQAALVGFGMTAGPLLVGGKAGVVQPAQAAGLSKVNSELAGYGLPPILDVPGGFSPLVEVYGKAAGAKKERETLLVQFLYPSLWVVSKPSIDKNGEEGTISAGDYQKGDSAAFYVEEGPASGKLEQESADYFGEVVKRAIGQKSQNVYQNFKVLKKRPGAKGANGAQYTIVEFKYELLTGAGFTVDRKGVASVTQVGKNVQGLWVATTAARWKKIGNDCITMADSFRVYDGIAPA 317
MVELGDTYSYVHYIYDRITSITPEMKQVIIALGILTGVTEAFWLQPVKQSSRSHCRKLFAEEPSSSSVCDSSSRQGFLQTLAGQAALVGFGMTAGPLLVGGKAGVVQPAQAAGLSKVNSELAGYGLPPILDVPGGFSPLVEVYGKAAGAKKERETLLVQFLYPSLWVVSKPSIDKNGEEGTISAGDYQKGDSAAFYVEEGPASGKLEQESADYFGEVVKRAIGQKSQNVYQNFKVLKKRPGAKGANGAQYTIVEFKYELLTGAGFTVDRKGVASVTQVGKNVQGLWVATTAARWKKIGNDCITMADSFRVYDGIAPA
Sbjct: 1 MVELGDTYSYVHYIYDRITSITPEMKQVIIALGILTGVTEAFWLQPVKQSSRSHCRKLFAEEPSSSSVCDSSSRQGFLQTLAGQAALVGFGMTAGPLLVGGKAGVVQPAQAAGLSKVNSELAGYGLPPILDVPGGFSPLVEVYGKAAGAKKERETLLVQFLYPSLWVVSKPSIDKNGEEGTISAGDYQKGDSAAFYVEEGPASGKLEQESADYFGEVVKRAIGQKSQNVYQNFKVLKKRPGAKGANGAQYTIVEFKYELLTGAGFTVDRKGVASVTQVGKNVQGLWVATTAARWKKIGNDCITMADSFRVYDGIAPA 317
BLAST of EWM25129.1 vs. NCBI_GenBank
Match: gi|553196147|ref|XP_005856277.1| (hypothetical protein NGA_2003000, partial [Nannochloropsis gaditana CCMP526] >gi|422292755|gb|EKU20057.1| hypothetical protein NGA_2003000, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 602.053 bits (1551), Expect = 0.000e+0 Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0
Query: 21 ITPEMKQVIIALGILTGVTEAFWLQPVKQSSRSHCRKLFAEEPSSSSVCDSSSRQGFLQTLAGQAALVGFGMTAGPLLVGGKAGVVQPAQAAGLSKVNSELAGYGLPPILDVPGGFSPLVEVYGKAAGAKKERETLLVQFLYPSLWVVSKPSIDKNGEEGTISAGDYQKGDSAAFYVEEGPASGKLEQESADYFGEVVKRAIGQKSQNVYQNFKVLKKRPGAKGANGAQYTIVEFKYELLTGAGFTVDRKGVASVTQVGKNVQGLWVATTAARWKKIGNDCITMADSFRVYDGIAPA 317
ITPEMKQVIIALGILTGVTEAFWLQPVKQSSRSHCRKLFAEEPSSSSVCDSSSRQGFLQTLAGQAALVGFGMTAGPLLVGGKAGVVQPAQAAGLSKVNSELAGYGLPPILDVPGGFSPLVEVYGKAAGAKKERETLLVQFLYPSLWVVSKPSIDKNGEEGTISAGDYQKGDSAAFYVEEGPASGKLEQESADYFGEVVKRAIGQKSQNVYQNFKVLKKRPGAKGANGAQYTIVEFKYELLTGAGFTVDRKGVASVTQVGKNVQGLWVATTAARWKKIGNDCITMADSFRVYDGIAPA
Sbjct: 1 ITPEMKQVIIALGILTGVTEAFWLQPVKQSSRSHCRKLFAEEPSSSSVCDSSSRQGFLQTLAGQAALVGFGMTAGPLLVGGKAGVVQPAQAAGLSKVNSELAGYGLPPILDVPGGFSPLVEVYGKAAGAKKERETLLVQFLYPSLWVVSKPSIDKNGEEGTISAGDYQKGDSAAFYVEEGPASGKLEQESADYFGEVVKRAIGQKSQNVYQNFKVLKKRPGAKGANGAQYTIVEFKYELLTGAGFTVDRKGVASVTQVGKNVQGLWVATTAARWKKIGNDCITMADSFRVYDGIAPA 297
BLAST of EWM25129.1 vs. NCBI_GenBank
Match: gi|1210530392|dbj|GAX10976.1| (hypothetical protein FisN_2Lh506 [Fistulifera solaris]) HSP 1 Score: 206.068 bits (523), Expect = 2.161e-61 Identity = 120/279 (43.01%), Postives = 166/279 (59.50%), Query Frame = 0
Query: 41 AFWLQPVKQSSRSHCRKLFAEEPSSSSVC------DSSSRQGFLQTLAGQAALVGFGMTAGPLLVGGKAGVVQPAQA-AGLSKVNSELAGYGLPPILDVPGGFSPLVEVYGKAAGAKKERETLLVQFLYPSLWVVSKPSIDKNGEEGTISAGDYQKGDSAAFYVEEGPAS-GKLEQESADYFGEVVKRAIGQKSQNVYQNFKVLKKRPGAKGANGAQYTIVEFKYELLTGAGFTVDRKGVASVTQVGKNVQGLWVATTAARWKKIGNDCITMADSFRVY 311
AFW + C +EP+S V D+ + +G ++ QAA+ T G + G+ +QPA A +G+SKV+++L GYGLPP+ VP GF+PL+E+YGK K R +LV F +P WVV PS D NGE+GT+ AGDY KGD+A F+V P + + + F + + ++IGQK +N+YQNFKV K P K G Y + +FKY+LLTGAGF VDRKGVAS+T G V+ LW A+T+AR+KK + + DSFR Y
Sbjct: 11 AFW---------AGCSAFTVQEPASRRVTSLSLSEDNMTTEGSRRSFLSQAAI-----TTG-MACFGEILSLQPANAVSGVSKVDAKLRGYGLPPLGPVPDGFAPLLEIYGKG----KNRFPILVSFSHPITWVVQTPSNDVNGEDGTVQAGDYGKGDTATFFVYSDPGHVNDIASQPKELFEKALMKSIGQKGENMYQNFKVTKLVPVTKA--GQTYVMADFKYQLLTGAGFEVDRKGVASITSEGPAVEVLWAASTSARFKKTEQNLRNIVDSFRCY 268
BLAST of EWM25129.1 vs. NCBI_GenBank
Match: gi|1210528332|dbj|GAX13021.1| (hypothetical protein FisN_2Hh506 [Fistulifera solaris]) HSP 1 Score: 204.527 bits (519), Expect = 3.207e-61 Identity = 113/250 (45.20%), Postives = 152/250 (60.80%), Query Frame = 0
Query: 64 SSSSVCDSSSRQGFLQTLAGQAALVGFGMTAGPLLVGGKAGVVQPAQA-AGLSKVNSELAGYGLPPILDVPGGFSPLVEVYGKAAGAKKERETLLVQFLYPSLWVVSKPSIDKNGEEGTISAGDYQKGDSAAFYVEEGPAS-GKLEQESADYFGEVVKRAIGQKSQNVYQNFKVLKKRPGAKGANGAQYTIVEFKYELLTGAGFTVDRKGVASVTQVGKNVQGLWVATTAARWKKIGNDCITMADSFRVY 311
S ++ SR+ FL A + FG T +QPA A +G+SKV+++L GYGLPP+ VP GF+PL+E+YGK K R +LV F +P WVV PS D NGE+GT+ AGDY KGD+A F+V P + + + F + + ++IGQK +N+YQNFKV K P K G Y + +FKY+LLTGAGF VDRKGVAS+T G V+ LW A+T+AR+KK + + DSFR Y
Sbjct: 7 SEDNLITEGSRRSFLSQAAITTGMACFGETLS----------LQPANAVSGVSKVDAKLRGYGLPPLGPVPDGFAPLLEIYGKG----KNRFPILVSFSHPITWVVQTPSNDVNGEDGTVQAGDYGKGDTATFFVYSDPGHVNDIATQPKELFEKALMKSIGQKGENMYQNFKVTKLTPVTKA--GQTYVMADFKYQLLTGAGFEVDRKGVASITSEGPAVEVLWAASTSARFKKTEPNLRNIVDSFRCY 240
BLAST of EWM25129.1 vs. NCBI_GenBank
Match: gi|219112979|ref|XP_002186073.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|209582923|gb|ACI65543.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 205.682 bits (522), Expect = 7.951e-61 Identity = 120/264 (45.45%), Postives = 160/264 (60.61%), Query Frame = 0
Query: 57 KLFAEEPSSSSVCDSSSRQGFLQTLAGQAALVGFGMTAGPLLVGGKAGVVQPAQAA----GLSKVNSELAGYGLPPILDVPGGFSPLVEVYGKAAGAKKERETLLVQFLYPSLWVVSKPSIDKNGEEGTISAGDYQKGDSAAFYVEEGPASGK-LEQESADYFGEVVKRAIGQKSQNVYQNFKVLKKRPGAKGANGAQYTIVEFKYELLTGAGFTVDRKGVASVTQVGKNVQGLWVATTAARWKKIGNDCITMADSFRVY-DGI 314
+L+A P ++ D SR+ FL AAL G G G V P AA G+ KVN++LAGYGLP + +VP G +PL+E+YGK R +LVQF YP WVV+ PS + NGE+GT+ AG+Y KGD+A F++ P + K + +S ++F + + R+IGQK N+YQNFKV K P K +G Y I +FKY+LLTGAGF VDRKGVAS+T G V+ LW A+TA R+KK + SFR Y DG+
Sbjct: 48 RLWASSPGNN---DDDSRRDFLTRSLATAALASGGWFTGT----GVGYVADPPAAAWALTGVKKVNAKLAGYGLPLVSNVPDGLTPLLEIYGKGV----NRFPVLVQFNYPVTWVVTTPSNNVNGEDGTVQAGEYNKGDTATFFLYSEPGNIKDVTTQSKEFFEKALMRSIGQKGDNMYQNFKVTKLEPTVK--DGKPYMIADFKYQLLTGAGFEVDRKGVASITSQGDAVEVLWAASTAIRYKKTEETLRNIVASFRCYADGL 298
BLAST of EWM25129.1 vs. NCBI_GenBank
Match: gi|397613888|gb|EJK62480.1| (hypothetical protein THAOC_16908 [Thalassiosira oceanica]) HSP 1 Score: 189.119 bits (479), Expect = 7.927e-55 Identity = 109/211 (51.66%), Postives = 136/211 (64.45%), Query Frame = 0
Query: 108 PAQAAGLSKVNSELAGYGLPPILDVPGGFSPLVEVYGKAAGAKKERETLLVQFLYPSLWVVSKPSIDKNGEEGTISAGDYQKGDSAAFYVEEGPASGKLEQESAD--YFGEVVKRAIGQKSQNVYQNFKVLKKRPGAKGANGAQYTIVEFKYELLTGAGFTVDRKGVASVTQVGKNVQGLWVATTAARWKKIGNDCI-TMADSFRVY-DGI 314
PA A GL K N +L YGLP +++VPG +S L E+YGK A R LLV F +P WVV+ PS D NGE+GTI AG+Y KGD+A F+V P GK++ +S D +F E + AI QKS N+YQ+FKV K P A G +Y V FKY LLTGAGF V+RKGVASVT VG VQ LW A+ AAR++ D + T+ SF Y DG+
Sbjct: 69 PAFAYGLGKANDKLKSYGLPGLVNVPGSYSALAEIYGKGA----NRSPLLVAFGFPIDWVVTLPSQDVNGEDGTIQAGEYAKGDTATFFVL--PNEGKVDIQSKDKKFFAEALIAAISQKSSNIYQDFKVTKMEPSADG----KYMYVNFKYTLLTGAGFEVERKGVASVTSVGNGVQLLWSASIAARYRAKTEDQLNTIVRSFVCYSDGL 269
BLAST of EWM25129.1 vs. NCBI_GenBank
Match: gi|299472180|emb|CBN79683.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 186.808 bits (473), Expect = 1.056e-53 Identity = 108/249 (43.37%), Postives = 149/249 (59.84%), Query Frame = 0
Query: 72 SSRQGFLQTLAGQA-ALVGFGMTA-GPLLVGGKAGVVQPAQAAGLSKVNSELAGYGLPPILDVPGGFSPLVEVYGKAAGAKK-----ERETLLVQFLYPSLWVVSKPSIDKNGEEGTISAGDYQKGDSAAFYVEEGPASGKLEQESADYFGEVVKRAIGQKSQNVYQNFKVLKKRPGAKGANGAQYTIVEFKYELLTGAGFTVDRKGVASVTQVGKNVQGLWVATTAARWKKIGNDCITMADSFRVYDG 313
S R+G + ++ AL FG G ++VG GV PA A +++ N L+ Y LPP++DVPGGF+ L+E YGK K R+ +LV + YP W+V +P+ D N E GT+S GDY +GDSA +V G S D V+K+A+ QK +N +Q+FK+ + G NG +Y I +F+YELLTGAGFTV+RKGVASVTQ+G +V + ATTA R K + +A SFRVY+G
Sbjct: 49 SDREGLASSACSRSEALSTFGAAVLGAVVVG--TGVPAPASAGSVAEANKRLSEYNLPPVVDVPGGFNTLLEGYGKDGALKNSLGSSNRDPILVTWNYPKGWIVQRPNTDTNKEAGTVSTGDYGRGDSAGLFVAPKSLIGGSSLSSKDTMEGVLKKALSQKGENQFQSFKLKSVKDGETDFNGNKYYIADFQYELLTGAGFTVERKGVASVTQIGNSVNAVVGATTANRAKTVKPQLQEIARSFRVYEG 295
BLAST of EWM25129.1 vs. NCBI_GenBank
Match: gi|676397741|ref|XP_009042148.1| (expressed protein [Aureococcus anophagefferens] >gi|323447220|gb|EGB03155.1| expressed protein [Aureococcus anophagefferens]) HSP 1 Score: 176.792 bits (447), Expect = 1.906e-50 Identity = 101/245 (41.22%), Postives = 147/245 (60.00%), Query Frame = 0
Query: 71 SSSRQGFLQTLAGQAALVGFGMTA-GPLLVGGKAGVVQPAQAAGLSKVNSELAGYGLPPILDVPGGFSPLVEVYGKAAGAKKERETLLVQFLYPSLWVVSKPSIDKNGEEGTISAGDYQKGDSAAFYVEEGPASGKLEQESADYFGEVVKRAIGQKSQNVYQNFKVLKKRPGAKGANGAQYTIVEFKYELLTGAGFTVDRKGVASVTQVGKNVQGLWVATTAARWKKIGNDCITMADSFRVYDGI 314
S +R+G LAG A+LV G+ + P PA A L+K N +L GLPP+ +P GFSP++ + + ++L+VQF +P+ W+V KPS++ NGE GT+SAGDY KGDSAA YV + P G ++ +++ + + QK N +QNF+V PG+ A +V+F+YELLTGAGFTV+R+GVA+V+ V Q L TT+AR+KK+ + + DSFRVYD +
Sbjct: 27 SVARRG---ALAGGASLVAAGLVSLAP----------APALAYDLAKYNRKLDKLGLPPVAGIPDGFSPVLS-------SVNQDQSLIVQFNHPNAWLVVKPSVNTNGESGTVSAGDYGKGDSAALYVSDLPPGGDKA-----FYAKLIAKGLAQKGDNQFQNFRVRAVSPGSPNA------VVDFEYELLTGAGFTVERRGVAAVSGVAGKSQALLAVTTSARYKKLEPELRKIVDSFRVYDKV 240
BLAST of EWM25129.1 vs. NCBI_GenBank
Match: gi|223995569|ref|XP_002287458.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976574|gb|EED94901.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 174.866 bits (442), Expect = 6.201e-49 Identity = 111/273 (40.66%), Postives = 148/273 (54.21%), Query Frame = 0
Query: 71 SSSRQGFLQTLAGQAALVGFGMTAGPLLVGGKAGVVQPAQAAGLSKVNSELAG------------------------YGLPPILDVPGGFSPLVEVYGKAAGAKKERETLLVQFLYPSLWVVSKPSIDKNGEEGTISAGDYQKGDSAAFYVEEGPASGKLEQ---ESADYFGEVVKRAIGQKSQNVYQNFKVLKKRPGAKGANGAQYTIVEFKYELLTGAGFTVDRKGVASVTQVGKNVQGLWVATTAARWK-KIGNDCITMADSFRVY-DGI 314
++SR+GF+ +A +A V G+ P PA A G+ K N LA +GLPP+ P GF+ L E+YGK + R LLV F +P WVV+ PS D NGE+GTI AG+Y KGD+A F+V P GK+E + ++F + AI QK N+YQ+FK+ K P + + +Y +V+FKY LLTGAGF V+RKGVASVT VG VQ LW A+ AAR+K K + SFR Y DG+
Sbjct: 49 TTSRRGFIDNMASMSAAVA-GIFMMP----------SPAMAYGIKKSNERLASERFAMINVNVNNPLIKLISLHTISFGLPPLAKTPDGFTALAEIYGKG----RNRSPLLVTFGFPLDWVVTLPSQDVNGEDGTIQAGEYAKGDTATFFVV--PDQGKVENILDKDKEFFKSSLIAAISQKGNNIYQDFKITKLEPVS--VDNQKYMLVDFKYTLLTGAGFEVERKGVASVTSVGDGVQLLWSASIAARYKNKTEGSLRGIVQSFRCYADGL 302
BLAST of EWM25129.1 vs. NCBI_GenBank
Match: gi|1072222222|gb|OEU06990.1| (hypothetical protein FRACYDRAFT_252622 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 167.933 bits (424), Expect = 2.823e-46 Identity = 95/213 (44.60%), Postives = 125/213 (58.69%), Query Frame = 0
Query: 108 PAQAA-GLSKVNSELAGYGLPPILDVPGGFSPLVEVYGKAAGAKKERETLLVQFLYPSLWVVSKPSIDKNGEEGTISAGDYQKGDSAAFYVEEGPAS-GKLEQESADYFGEVVKRAIGQKSQNVYQNFKVLKKRPGAKGANG---AQYTIVEFKYELLTGAGFTVDRKGVASVTQVGKNVQGLWVATTAARWKKIGNDCITMADSFRVY-DGI 314
PA AA G K+N+ L YGLP I+++P G PL+EVYGK K R LLV +P WVV PS D NGE+GT+ AG+Y KGD+A F++ E + + +V+ AI QK N+YQ+FKV+K P +Y I +FKY LLTGAGF V+R+GVAS+T G V+ LW A+T R+KK + SFR Y DG+
Sbjct: 77 PANAASGADKINARLRSYGLPSIVNIPSGMKPLLEVYGKG----KNRFPLLVLMNHPLTWVVQLPSNDVNGEDGTVQAGEYAKGDTATFFLYEPEGHIDNIYDVDKKLYEKVLIAAISQKGGNMYQDFKVIKSTPQVDNTAAYGDRKYVICDFKYTLLTGAGFEVERRGVASLTSEGPAVEALWAASTRERFKKTETTLRDIVSSFRCYGDGV 285 The following BLAST results are available for this feature:
BLAST of EWM25129.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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