EWM25146.1, cds5560 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25146.1 vs. NCBI_GenBank
Match: gi|585106784|gb|EWM25146.1| (hypothetical protein Naga_100016g34 [Nannochloropsis gaditana]) HSP 1 Score: 1092.41 bits (2824), Expect = 0.000e+0 Identity = 529/529 (100.00%), Postives = 529/529 (100.00%), Query Frame = 0
Query: 1 MADFCDLTEDLASPVKAHGQETVILKDDQDDEDNLLNDPFEAVGLPAPPIDVSTSSLTQTSDFIVRSCRMASREEEDERGERGNDKFQGGAEHTRGVSTSHERRILSTSLNGRSDEHISRVRKERRAAVKAEREAKQVEERIRKARAKLICDSQRGLYKHEEIVMVVEKRLRHTPLGEVIADIRRSEEFKSKQIFVAGPGCAEEEDEMPEAACYHPGLIMWARMPKPLWDSEEECPRHSGPFVEQLGLVIVVWDAGEFCDKLAVDARGICRRRTVGDSRIETVGTVVGSYDTLQHAIQSIRLSPGIPADSRVVLVLQGVKAEIASRWRQRGGGAVEQGARLTMDDYADALVWMLLAEGIEYKETKDAAETGTYLRDVTRALAEVPFRDTATELSSAAKGKAIVNTGLGGNRDEALVFASSTQGLSQADKVATAWARQLEVVPGMSDTKALHIVNNHHGTLRSLLDVYQDPKYSEEEKMNWLADKMESVSGTRAPKQFKSLSMKIYQCLTAHEPQSLINECGDNNKGKRK 529
MADFCDLTEDLASPVKAHGQETVILKDDQDDEDNLLNDPFEAVGLPAPPIDVSTSSLTQTSDFIVRSCRMASREEEDERGERGNDKFQGGAEHTRGVSTSHERRILSTSLNGRSDEHISRVRKERRAAVKAEREAKQVEERIRKARAKLICDSQRGLYKHEEIVMVVEKRLRHTPLGEVIADIRRSEEFKSKQIFVAGPGCAEEEDEMPEAACYHPGLIMWARMPKPLWDSEEECPRHSGPFVEQLGLVIVVWDAGEFCDKLAVDARGICRRRTVGDSRIETVGTVVGSYDTLQHAIQSIRLSPGIPADSRVVLVLQGVKAEIASRWRQRGGGAVEQGARLTMDDYADALVWMLLAEGIEYKETKDAAETGTYLRDVTRALAEVPFRDTATELSSAAKGKAIVNTGLGGNRDEALVFASSTQGLSQADKVATAWARQLEVVPGMSDTKALHIVNNHHGTLRSLLDVYQDPKYSEEEKMNWLADKMESVSGTRAPKQFKSLSMKIYQCLTAHEPQSLINECGDNNKGKRK
Sbjct: 1 MADFCDLTEDLASPVKAHGQETVILKDDQDDEDNLLNDPFEAVGLPAPPIDVSTSSLTQTSDFIVRSCRMASREEEDERGERGNDKFQGGAEHTRGVSTSHERRILSTSLNGRSDEHISRVRKERRAAVKAEREAKQVEERIRKARAKLICDSQRGLYKHEEIVMVVEKRLRHTPLGEVIADIRRSEEFKSKQIFVAGPGCAEEEDEMPEAACYHPGLIMWARMPKPLWDSEEECPRHSGPFVEQLGLVIVVWDAGEFCDKLAVDARGICRRRTVGDSRIETVGTVVGSYDTLQHAIQSIRLSPGIPADSRVVLVLQGVKAEIASRWRQRGGGAVEQGARLTMDDYADALVWMLLAEGIEYKETKDAAETGTYLRDVTRALAEVPFRDTATELSSAAKGKAIVNTGLGGNRDEALVFASSTQGLSQADKVATAWARQLEVVPGMSDTKALHIVNNHHGTLRSLLDVYQDPKYSEEEKMNWLADKMESVSGTRAPKQFKSLSMKIYQCLTAHEPQSLINECGDNNKGKRK 529
BLAST of EWM25146.1 vs. NCBI_GenBank
Match: gi|585106785|gb|EWM25147.1| (hypothetical protein Naga_100016g34 [Nannochloropsis gaditana]) HSP 1 Score: 1009.98 bits (2610), Expect = 0.000e+0 Identity = 492/492 (100.00%), Postives = 492/492 (100.00%), Query Frame = 0
Query: 1 MADFCDLTEDLASPVKAHGQETVILKDDQDDEDNLLNDPFEAVGLPAPPIDVSTSSLTQTSDFIVRSCRMASREEEDERGERGNDKFQGGAEHTRGVSTSHERRILSTSLNGRSDEHISRVRKERRAAVKAEREAKQVEERIRKARAKLICDSQRGLYKHEEIVMVVEKRLRHTPLGEVIADIRRSEEFKSKQIFVAGPGCAEEEDEMPEAACYHPGLIMWARMPKPLWDSEEECPRHSGPFVEQLGLVIVVWDAGEFCDKLAVDARGICRRRTVGDSRIETVGTVVGSYDTLQHAIQSIRLSPGIPADSRVVLVLQGVKAEIASRWRQRGGGAVEQGARLTMDDYADALVWMLLAEGIEYKETKDAAETGTYLRDVTRALAEVPFRDTATELSSAAKGKAIVNTGLGGNRDEALVFASSTQGLSQADKVATAWARQLEVVPGMSDTKALHIVNNHHGTLRSLLDVYQDPKYSEEEKMNWLADKMESVSGTR 492
MADFCDLTEDLASPVKAHGQETVILKDDQDDEDNLLNDPFEAVGLPAPPIDVSTSSLTQTSDFIVRSCRMASREEEDERGERGNDKFQGGAEHTRGVSTSHERRILSTSLNGRSDEHISRVRKERRAAVKAEREAKQVEERIRKARAKLICDSQRGLYKHEEIVMVVEKRLRHTPLGEVIADIRRSEEFKSKQIFVAGPGCAEEEDEMPEAACYHPGLIMWARMPKPLWDSEEECPRHSGPFVEQLGLVIVVWDAGEFCDKLAVDARGICRRRTVGDSRIETVGTVVGSYDTLQHAIQSIRLSPGIPADSRVVLVLQGVKAEIASRWRQRGGGAVEQGARLTMDDYADALVWMLLAEGIEYKETKDAAETGTYLRDVTRALAEVPFRDTATELSSAAKGKAIVNTGLGGNRDEALVFASSTQGLSQADKVATAWARQLEVVPGMSDTKALHIVNNHHGTLRSLLDVYQDPKYSEEEKMNWLADKMESVSGTR
Sbjct: 1 MADFCDLTEDLASPVKAHGQETVILKDDQDDEDNLLNDPFEAVGLPAPPIDVSTSSLTQTSDFIVRSCRMASREEEDERGERGNDKFQGGAEHTRGVSTSHERRILSTSLNGRSDEHISRVRKERRAAVKAEREAKQVEERIRKARAKLICDSQRGLYKHEEIVMVVEKRLRHTPLGEVIADIRRSEEFKSKQIFVAGPGCAEEEDEMPEAACYHPGLIMWARMPKPLWDSEEECPRHSGPFVEQLGLVIVVWDAGEFCDKLAVDARGICRRRTVGDSRIETVGTVVGSYDTLQHAIQSIRLSPGIPADSRVVLVLQGVKAEIASRWRQRGGGAVEQGARLTMDDYADALVWMLLAEGIEYKETKDAAETGTYLRDVTRALAEVPFRDTATELSSAAKGKAIVNTGLGGNRDEALVFASSTQGLSQADKVATAWARQLEVVPGMSDTKALHIVNNHHGTLRSLLDVYQDPKYSEEEKMNWLADKMESVSGTR 492
BLAST of EWM25146.1 vs. NCBI_GenBank
Match: gi|298705383|emb|CBJ28673.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 91.2781 bits (225), Expect = 1.013e-15 Identity = 101/367 (27.52%), Postives = 155/367 (42.23%), Query Frame = 0
Query: 135 AKQVEERIRKARAKLICDSQ-RGLYKHEEIVMVVEKRLRHTPLGEVIADIRRSEEFKSKQIFVAGPGCAEEEDEMPEAACYHPGLIMWARMPKPLWDSEEECPRHSGPFVEQLGLVIVVWDAGEFCDKLAVDARGICRRRTVGDSRIETVGTVVGSYDTLQHAIQSIRLSPGIPADSRVVLVLQGVKAEIASRWRQR-------GGGAVEQGARLTMDDYADALVWMLLAEGIEYKETKDAAETGTYLRDVTRALAEVPFRDTATELSSAAKGKAIVNTGLGGNRDEALVFASSTQGLSQADK-VATAWARQLEVVPGMSDTKALHIVNNHHGTLRSLLDVYQDPKYSEEEKMNWLADKMESVSGTR 492
AKQ E+ + A+ K D Q RG ++ EE+ V+E+ + A +E+ K+ F+ PG C G + W R + D SGP V+ L +++VV D+L G G + +G + + IR S SR+VLVL+G KA I RW G G G D++ DA W+L+ + +E + TK++ ETG YL D+T++L+ +P++D TEL A+ K A ++ + +K + W R LE V +S KA+ I H+ R L+ DP E ++ L KM S S R
Sbjct: 435 AKQREKAEKAAKTKR--DQQARGNFRDEEVACVMERHFFDS-ARNARARAGAAEQQGHKEKFMVAPG-----------DCGAAGAVWWTR--RAHLDGGAAV---SGPGVQTLDILVVVVPPETLLDRLGRPGAGGRGPGDGGGGGGSDLFRGLGQF------VDGIRSS--AAGFSRLVLVLEGAKAAIDKRWAASAHSSSSSGNGKGPAGRCARDDEFEDAQCWLLIHKEVETRLTKNSEETGQYLWDLTKSLSSMPYKDDVTELHCVARSK---------------TEARGSERFPEKEKELMDTWVRMLEQVQHVSGNKAVEIA-AHYPLPRDLVAALSDPSVPEGDRAGLLQRKMGSSSEQR 758
BLAST of EWM25146.1 vs. NCBI_GenBank
Match: gi|1173957116|gb|OQS03725.1| (hypothetical protein THRCLA_03971 [Thraustotheca clavata]) HSP 1 Score: 78.9518 bits (193), Expect = 6.018e-12 Identity = 55/210 (26.19%), Postives = 105/210 (50.00%), Query Frame = 0
Query: 310 SRVVLVLQGVKAEIASRWR--QRGGGAVEQGARLTMDDYADALVWMLLAEGIEYKETKDAAETGTYLRDVTRALAEVPFRDTATELSSAAKGKAIVNTGLGGNRDEALVFASSTQGLSQADKVATAWARQLEVVPGMSDTKALHIVNNHHGTLRSLLDVYQDPKYSEEEKMNWLADKMESVSGTRAPKQFKSLSMKIYQCLTAHEPQSLI 517
+R+ L+++GV+ + R R QRG G +T D +A+V + + T ++ +Y+ +TR ++++P + L+ + ++ T GGN + F + L +++ + AW R L+++PG+S+ A IV +++ T+ SL+ VY +P + K LA+K+ RA LS +IY T+ P +L+
Sbjct: 325 ARIFLLVEGVEKALIERQRLQQRGNG---NTTCVTFADVHNAVVHLFINSFCHIHFTSLPEDSASYIISLTREISQLPTLTPSNILTHTVRLTSLRVTRNGGNIIITMSFLDN--KLDTSNEYSNAWLRMLQMIPGVSEAIAQRIV-DYYPTIDSLMQVYTNPSIPNDVKQIILAEKL------RANSIEIVLSKRIYNVFTSTNPNTLL 522
BLAST of EWM25146.1 vs. NCBI_GenBank
Match: gi|675211235|ref|XP_008914502.1| (hypothetical protein PPTG_18142 [Phytophthora parasitica INRA-310] >gi|568085227|gb|ETN00138.1| hypothetical protein PPTG_18142 [Phytophthora parasitica INRA-310]) HSP 1 Score: 70.0922 bits (170), Expect = 1.229e-9 Identity = 56/189 (29.63%), Postives = 80/189 (42.33%), Query Frame = 0
Query: 331 GGGAVEQGARLTMDDYADALVWMLLAEGIEYKETKDAAETGTYLRDVTRALAEVPFRDTATE--LSSAAKGKAIVNTGLGGNRDEALVFASSTQGLSQADKVATAWARQLEVVPGMSDTKALHIVNNHHGTLRSLLDVYQDPKYSEEEKMNWLADKMESVSGTRAPKQFKSLSMKIYQCLTAHEPQSLI 517
G A+ +T D + + + G K T D T Y+ +TR L R TA E L S + + T GG A A AW R L+V+PG+S+ KA + +H T SL+ Y+DP+ S +K + +ADK+ RA LS KIY +P +LI
Sbjct: 136 GTAAISTSPMITFADLQEIAFQLFMDVGAHTKFTCDLEATANYVALLTRELVVASSRATALEELLESVPRYNSFRVTRSGGT----------------ASASANAWLRMLQVIPGVSEDKA-QCLLDHFPTFDSLMRAYRDPRLSRAQKEDIVADKLHDARTQRA------LSKKIYSVFCEEDPDALI 301
BLAST of EWM25146.1 vs. NCBI_GenBank
Match: gi|813126083|ref|XP_012196914.1| (hypothetical protein SPRG_02940 [Saprolegnia parasitica CBS 223.65] >gi|641538632|gb|KDO32463.1| hypothetical protein SPRG_02940 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 70.0922 bits (170), Expect = 2.616e-9 Identity = 61/212 (28.77%), Postives = 103/212 (48.58%), Query Frame = 0
Query: 310 SRVVLVLQGV-KAEIA-SRWRQRGGGAVEQGAR-LTMDDYADALVWMLLAE--GIEYKETKDAAETGTYLRDVTRALAEVPFRDTATELSSAAKGKAIVNTGLGGNRDEALVFASSTQGLSQADKVATAWARQLEVVPGMSDTKALHIVNNHHGTLRSLLDVYQDPKYSEEEKMNWLADKMESVSGTRAPKQFKSLSMKIYQCLTAHEPQSL 516
+R L+++G+ KA +A R RQR G GAR +T D +A+V + + I + T D ++ Y+ +TR +A +P LS + ++ T G +E +A AW R LE++PGMS A ++ +++ T+ SL+ VY +P + K LA+K+ A + FK LS +IY T+ P+++
Sbjct: 197 ARTFLLVEGLEKALVARQRARQRQG----HGARPVTFSDVHNAVVHLFVNSFCHIHFAATPD--DSAAYVLSLTREIAALPLTPPNDFLSHVPRLTSVRATTNGDTSNE----------------LANAWLRMLEMIPGMSPEMAQRLL-DYYPTIDSLMTVYVNPNVPVKVKELLLAEKLV------ANRVFKVLSKRIYAIFTSPNPRTI 379
BLAST of EWM25146.1 vs. NCBI_GenBank
Match: gi|570952769|gb|ETP18026.1| (hypothetical protein F441_07702, partial [Phytophthora parasitica CJ01A1] >gi|570952770|gb|ETP18027.1| hypothetical protein, variant, partial [Phytophthora parasitica CJ01A1]) HSP 1 Score: 69.707 bits (169), Expect = 5.526e-9 Identity = 56/189 (29.63%), Postives = 81/189 (42.86%), Query Frame = 0
Query: 331 GGGAVEQGARLTMDDYADALVWMLLAEGIEYKETKDAAETGTYLRDVTRALAEVPFRDTATE--LSSAAKGKAIVNTGLGGNRDEALVFASSTQGLSQADKVATAWARQLEVVPGMSDTKALHIVNNHHGTLRSLLDVYQDPKYSEEEKMNWLADKMESVSGTRAPKQFKSLSMKIYQCLTAHEPQSLI 517
G A+ +T D + + + G K T D T Y+ +TR L R TA E L S + + T GG A A AW R L+V+PG+S+ KA +++ H T SL+ Y+DP+ S +K + +ADK+ RA LS KIY +P +LI
Sbjct: 398 GTAAISTSPMITFADLQEIAFQLFMDVGAHTKFTCDLEATANYVALLTRELVVASSRATALEELLESVPRYNSFRVTRSGGT----------------ACASANAWLRMLQVIPGVSEDKAQCLLD-HFPTFDSLMRAYRDPRLSRAQKEDIVADKLHDARIQRA------LSKKIYSVFCEEDPDALI 563
BLAST of EWM25146.1 vs. NCBI_GenBank
Match: gi|567962645|gb|ETK88169.1| (hypothetical protein L915_07549, partial [Phytophthora parasitica]) HSP 1 Score: 69.3218 bits (168), Expect = 7.787e-9 Identity = 56/189 (29.63%), Postives = 81/189 (42.86%), Query Frame = 0
Query: 331 GGGAVEQGARLTMDDYADALVWMLLAEGIEYKETKDAAETGTYLRDVTRALAEVPFRDTATE--LSSAAKGKAIVNTGLGGNRDEALVFASSTQGLSQADKVATAWARQLEVVPGMSDTKALHIVNNHHGTLRSLLDVYQDPKYSEEEKMNWLADKMESVSGTRAPKQFKSLSMKIYQCLTAHEPQSLI 517
G A+ +T D + + + G K T D T Y+ +TR L R TA E L S + + T GG A A AW R L+V+PG+S+ KA +++ H T SL+ Y+DP+ S +K + +ADK+ RA LS KIY +P +LI
Sbjct: 383 GTAAISTSPMITFADLQEIAFQLFMDVGAHTKFTCDLEATANYVALLTRELVVASSRATALEELLESVPRYNSFRVTRSGGT----------------ACASANAWLRMLQVIPGVSEDKAQCLLD-HFPTFDSLMRAYRDPRLSRAQKEDIVADKLHDARIQRA------LSKKIYSVFCEEDPDALI 548
BLAST of EWM25146.1 vs. NCBI_GenBank
Match: gi|1214693056|gb|OWZ07490.1| (hypothetical protein PHMEG_00020112 [Phytophthora megakarya]) HSP 1 Score: 64.3142 bits (155), Expect = 3.110e-7 Identity = 61/240 (25.42%), Postives = 101/240 (42.08%), Query Frame = 0
Query: 286 VVGSYDTLQHAI----QSIRLSPGIPADSRVVLVLQGV-KAEIASRWRQR---GGGAVEQGARLTMDDYADALVWMLLAEGIEYKETKDAAETGTYLRDVTRALAEVPFRDTATE--LSSAAKGKAIVNTGLGGNRDEALVFASSTQGLSQADKVATAWARQLEVVPGMSDTKALHIVNNHHGTLRSLLDVYQDPKYSEEEKMNWLADKMESVSGTRAPKQFKSLSMKIYQCLTAHEPQS 515
+VG+ LQ + Q +R S + +++QG+ +A IA + + + G A ++ D + + + G K T D + Y+ +TR E R TA E L + + + T G A A W R L+V+PG+S+ KA +++ H T SL+ Y+DP+ S+ +K + +ADK+ RA LS +IY P S
Sbjct: 79 LVGAVKYLQTLVPRSRQQVRKSQDEEELNNFFVIIQGMDRALIALKKKDKQKENGSAPSNSPMISFADLQEVAFQLFMDTGAHTKFTCDREASAEYVALLTREFVEASSRATALEELLEAVPRYNSFRVTHSGAT----------------ASVCANTWLRMLQVIPGVSEDKAQCLLD-HFPTFASLMRAYRDPRLSQAQKEDLVADKLHDARIQRA------LSKRIYLVFCEENPDS 295
BLAST of EWM25146.1 vs. NCBI_GenBank
Match: gi|301111458|ref|XP_002904808.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262095138|gb|EEY53190.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 62.003 bits (149), Expect = 5.027e-7 Identity = 53/189 (28.04%), Postives = 78/189 (41.27%), Query Frame = 0
Query: 331 GGGAVEQGARLTMDDYADALVWMLLAEGIEYKETKDAAETGTYLRDVTRALAEVPFRDTATE--LSSAAKGKAIVNTGLGGNRDEALVFASSTQGLSQADKVATAWARQLEVVPGMSDTKALHIVNNHHGTLRSLLDVYQDPKYSEEEKMNWLADKMESVSGTRAPKQFKSLSMKIYQCLTAHEPQSLI 517
G A ++ D + + + G K T D T Y+ +TR L R TA E L S + + T GG A A AW R L+V+PG+S+ KA + +H T L+ Y+DP+ S +K + +ADK+ RA LS KIY +P +L+
Sbjct: 115 GTAANRTLPMISFADLQEIAFQLFMDVGAHTKFTCDLEATANYVALLTRELVVASSRATALEEFLESVPRYNSFRVTHSGGT----------------ASASANAWLRMLQVIPGVSEDKA-QCLLDHFPTFDCLMRAYRDPRLSRAQKEDLVADKLHDARVQRA------LSKKIYAVFCEEDPDALV 280 The following BLAST results are available for this feature:
BLAST of EWM25146.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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