EWM25147.1, cds5559 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25147.1 vs. NCBI_GenBank
Match: gi|585106785|gb|EWM25147.1| (hypothetical protein Naga_100016g34 [Nannochloropsis gaditana]) HSP 1 Score: 1023.46 bits (2645), Expect = 0.000e+0 Identity = 499/499 (100.00%), Postives = 499/499 (100.00%), Query Frame = 0
Query: 1 MADFCDLTEDLASPVKAHGQETVILKDDQDDEDNLLNDPFEAVGLPAPPIDVSTSSLTQTSDFIVRSCRMASREEEDERGERGNDKFQGGAEHTRGVSTSHERRILSTSLNGRSDEHISRVRKERRAAVKAEREAKQVEERIRKARAKLICDSQRGLYKHEEIVMVVEKRLRHTPLGEVIADIRRSEEFKSKQIFVAGPGCAEEEDEMPEAACYHPGLIMWARMPKPLWDSEEECPRHSGPFVEQLGLVIVVWDAGEFCDKLAVDARGICRRRTVGDSRIETVGTVVGSYDTLQHAIQSIRLSPGIPADSRVVLVLQGVKAEIASRWRQRGGGAVEQGARLTMDDYADALVWMLLAEGIEYKETKDAAETGTYLRDVTRALAEVPFRDTATELSSAAKGKAIVNTGLGGNRDEALVFASSTQGLSQADKVATAWARQLEVVPGMSDTKALHIVNNHHGTLRSLLDVYQDPKYSEEEKMNWLADKMESVSGTRVSALRCL 499
MADFCDLTEDLASPVKAHGQETVILKDDQDDEDNLLNDPFEAVGLPAPPIDVSTSSLTQTSDFIVRSCRMASREEEDERGERGNDKFQGGAEHTRGVSTSHERRILSTSLNGRSDEHISRVRKERRAAVKAEREAKQVEERIRKARAKLICDSQRGLYKHEEIVMVVEKRLRHTPLGEVIADIRRSEEFKSKQIFVAGPGCAEEEDEMPEAACYHPGLIMWARMPKPLWDSEEECPRHSGPFVEQLGLVIVVWDAGEFCDKLAVDARGICRRRTVGDSRIETVGTVVGSYDTLQHAIQSIRLSPGIPADSRVVLVLQGVKAEIASRWRQRGGGAVEQGARLTMDDYADALVWMLLAEGIEYKETKDAAETGTYLRDVTRALAEVPFRDTATELSSAAKGKAIVNTGLGGNRDEALVFASSTQGLSQADKVATAWARQLEVVPGMSDTKALHIVNNHHGTLRSLLDVYQDPKYSEEEKMNWLADKMESVSGTRVSALRCL
Sbjct: 1 MADFCDLTEDLASPVKAHGQETVILKDDQDDEDNLLNDPFEAVGLPAPPIDVSTSSLTQTSDFIVRSCRMASREEEDERGERGNDKFQGGAEHTRGVSTSHERRILSTSLNGRSDEHISRVRKERRAAVKAEREAKQVEERIRKARAKLICDSQRGLYKHEEIVMVVEKRLRHTPLGEVIADIRRSEEFKSKQIFVAGPGCAEEEDEMPEAACYHPGLIMWARMPKPLWDSEEECPRHSGPFVEQLGLVIVVWDAGEFCDKLAVDARGICRRRTVGDSRIETVGTVVGSYDTLQHAIQSIRLSPGIPADSRVVLVLQGVKAEIASRWRQRGGGAVEQGARLTMDDYADALVWMLLAEGIEYKETKDAAETGTYLRDVTRALAEVPFRDTATELSSAAKGKAIVNTGLGGNRDEALVFASSTQGLSQADKVATAWARQLEVVPGMSDTKALHIVNNHHGTLRSLLDVYQDPKYSEEEKMNWLADKMESVSGTRVSALRCL 499
BLAST of EWM25147.1 vs. NCBI_GenBank
Match: gi|585106784|gb|EWM25146.1| (hypothetical protein Naga_100016g34 [Nannochloropsis gaditana]) HSP 1 Score: 1009.98 bits (2610), Expect = 0.000e+0 Identity = 492/492 (100.00%), Postives = 492/492 (100.00%), Query Frame = 0
Query: 1 MADFCDLTEDLASPVKAHGQETVILKDDQDDEDNLLNDPFEAVGLPAPPIDVSTSSLTQTSDFIVRSCRMASREEEDERGERGNDKFQGGAEHTRGVSTSHERRILSTSLNGRSDEHISRVRKERRAAVKAEREAKQVEERIRKARAKLICDSQRGLYKHEEIVMVVEKRLRHTPLGEVIADIRRSEEFKSKQIFVAGPGCAEEEDEMPEAACYHPGLIMWARMPKPLWDSEEECPRHSGPFVEQLGLVIVVWDAGEFCDKLAVDARGICRRRTVGDSRIETVGTVVGSYDTLQHAIQSIRLSPGIPADSRVVLVLQGVKAEIASRWRQRGGGAVEQGARLTMDDYADALVWMLLAEGIEYKETKDAAETGTYLRDVTRALAEVPFRDTATELSSAAKGKAIVNTGLGGNRDEALVFASSTQGLSQADKVATAWARQLEVVPGMSDTKALHIVNNHHGTLRSLLDVYQDPKYSEEEKMNWLADKMESVSGTR 492
MADFCDLTEDLASPVKAHGQETVILKDDQDDEDNLLNDPFEAVGLPAPPIDVSTSSLTQTSDFIVRSCRMASREEEDERGERGNDKFQGGAEHTRGVSTSHERRILSTSLNGRSDEHISRVRKERRAAVKAEREAKQVEERIRKARAKLICDSQRGLYKHEEIVMVVEKRLRHTPLGEVIADIRRSEEFKSKQIFVAGPGCAEEEDEMPEAACYHPGLIMWARMPKPLWDSEEECPRHSGPFVEQLGLVIVVWDAGEFCDKLAVDARGICRRRTVGDSRIETVGTVVGSYDTLQHAIQSIRLSPGIPADSRVVLVLQGVKAEIASRWRQRGGGAVEQGARLTMDDYADALVWMLLAEGIEYKETKDAAETGTYLRDVTRALAEVPFRDTATELSSAAKGKAIVNTGLGGNRDEALVFASSTQGLSQADKVATAWARQLEVVPGMSDTKALHIVNNHHGTLRSLLDVYQDPKYSEEEKMNWLADKMESVSGTR
Sbjct: 1 MADFCDLTEDLASPVKAHGQETVILKDDQDDEDNLLNDPFEAVGLPAPPIDVSTSSLTQTSDFIVRSCRMASREEEDERGERGNDKFQGGAEHTRGVSTSHERRILSTSLNGRSDEHISRVRKERRAAVKAEREAKQVEERIRKARAKLICDSQRGLYKHEEIVMVVEKRLRHTPLGEVIADIRRSEEFKSKQIFVAGPGCAEEEDEMPEAACYHPGLIMWARMPKPLWDSEEECPRHSGPFVEQLGLVIVVWDAGEFCDKLAVDARGICRRRTVGDSRIETVGTVVGSYDTLQHAIQSIRLSPGIPADSRVVLVLQGVKAEIASRWRQRGGGAVEQGARLTMDDYADALVWMLLAEGIEYKETKDAAETGTYLRDVTRALAEVPFRDTATELSSAAKGKAIVNTGLGGNRDEALVFASSTQGLSQADKVATAWARQLEVVPGMSDTKALHIVNNHHGTLRSLLDVYQDPKYSEEEKMNWLADKMESVSGTR 492
BLAST of EWM25147.1 vs. NCBI_GenBank
Match: gi|298705383|emb|CBJ28673.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 93.2041 bits (230), Expect = 2.088e-16 Identity = 103/374 (27.54%), Postives = 157/374 (41.98%), Query Frame = 0
Query: 135 AKQVEERIRKARAKLICDSQ-RGLYKHEEIVMVVEKRLRHTPLGEVIADIRRSEEFKSKQIFVAGPGCAEEEDEMPEAACYHPGLIMWARMPKPLWDSEEECPRHSGPFVEQLGLVIVVWDAGEFCDKLAVDARGICRRRTVGDSRIETVGTVVGSYDTLQHAIQSIRLSPGIPADSRVVLVLQGVKAEIASRWRQR-------GGGAVEQGARLTMDDYADALVWMLLAEGIEYKETKDAAETGTYLRDVTRALAEVPFRDTATELSSAAKGKAIVNTGLGGNRDEALVFASSTQGLSQADK-VATAWARQLEVVPGMSDTKALHIVNNHHGTLRSLLDVYQDPKYSEEEKMNWLADKMESVSGTRVSALRCL 499
AKQ E+ + A+ K D Q RG ++ EE+ V+E+ + A +E+ K+ F+ PG C G + W R + D SGP V+ L +++VV D+L G G + +G + + IR S SR+VLVL+G KA I RW G G G D++ DA W+L+ + +E + TK++ ETG YL D+T++L+ +P++D TEL A+ K A ++ + +K + W R LE V +S KA+ I H+ R L+ DP E ++ L KM S S R A R
Sbjct: 435 AKQREKAEKAAKTKR--DQQARGNFRDEEVACVMERHFFDS-ARNARARAGAAEQQGHKEKFMVAPG-----------DCGAAGAVWWTR--RAHLDGGAAV---SGPGVQTLDILVVVVPPETLLDRLGRPGAGGRGPGDGGGGGGSDLFRGLGQF------VDGIRSS--AAGFSRLVLVLEGAKAAIDKRWAASAHSSSSSGNGKGPAGRCARDDEFEDAQCWLLIHKEVETRLTKNSEETGQYLWDLTKSLSSMPYKDDVTELHCVARSK---------------TEARGSERFPEKEKELMDTWVRMLEQVQHVSGNKAVEIA-AHYPLPRDLVAALSDPSVPEGDRAGLLQRKMGSSSEQRKCARRVF 765 The following BLAST results are available for this feature:
BLAST of EWM25147.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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