EWM25137.1, cds5555 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25137.1 vs. NCBI_GenBank
Match: gi|585106775|gb|EWM25137.1| (capping protein (actin filament) muscle z- alpha 2 [Nannochloropsis gaditana]) HSP 1 Score: 544.273 bits (1401), Expect = 0.000e+0 Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0
Query: 1 MSYSTPPLNVEGRHDAMEEEPSSQYADHRQHIAEQMLLSSPPGQFGHVLTDLRKLLPASVLTESFVQEVTKVYNARRGIGLGKVEEMRNLTEGQERLNMKRQELERALAGHVTESYASDSATTTMCSVKGSTLHVIIYSERVNLANFWSASWLSEWSIDDDKLSGSIQVRAHYFEDGNVQLHVNKSYPVLSVSLRSDTAIIVECIKLAEETLSKNIEATCQELSTEGLHSLRRKLPVSKVKMNWSDAAAQNISKVLHNNTEH 262
MSYSTPPLNVEGRHDAMEEEPSSQYADHRQHIAEQMLLSSPPGQFGHVLTDLRKLLPASVLTESFVQEVTKVYNARRGIGLGKVEEMRNLTEGQERLNMKRQELERALAGHVTESYASDSATTTMCSVKGSTLHVIIYSERVNLANFWSASWLSEWSIDDDKLSGSIQVRAHYFEDGNVQLHVNKSYPVLSVSLRSDTAIIVECIKLAEETLSKNIEATCQELSTEGLHSLRRKLPVSKVKMNWSDAAAQNISKVLHNNTEH
Sbjct: 1 MSYSTPPLNVEGRHDAMEEEPSSQYADHRQHIAEQMLLSSPPGQFGHVLTDLRKLLPASVLTESFVQEVTKVYNARRGIGLGKVEEMRNLTEGQERLNMKRQELERALAGHVTESYASDSATTTMCSVKGSTLHVIIYSERVNLANFWSASWLSEWSIDDDKLSGSIQVRAHYFEDGNVQLHVNKSYPVLSVSLRSDTAIIVECIKLAEETLSKNIEATCQELSTEGLHSLRRKLPVSKVKMNWSDAAAQNISKVLHNNTEH 262
BLAST of EWM25137.1 vs. NCBI_GenBank
Match: gi|1173948999|gb|OQR97077.1| (F-actin-capping protein subunit alpha [Achlya hypogyna]) HSP 1 Score: 111.309 bits (277), Expect = 1.771e-25 Identity = 78/287 (27.18%), Postives = 133/287 (46.34%), Query Frame = 0
Query: 17 MEEEPSSQYADHRQHIAEQMLLSSPPGQFGHVLTDLRKLLPASVLTESFVQEVTKVYNARRGIGL--------------GKVEEMR----------------------NLTEGQERLNMK----RQELERALAGHVTESYASDSATTTMCSVKGSTLHVIIYSERVNLANFW--------------SASWLSEWSIDDDK--LSGSIQVRAHYFEDGNVQLHVNKSYPVLSVSLRSDT--AIIVECIKLAEETLSKNIEATCQELSTEGLHSLRRKLPVSKVKMNWS 245
ME E + D + +A ++LLSSPPG+ V D+ KLLPA +LT++ ++ V + YN + G+ G+V+ ++++ E+ M R +++AL G+V +A+ A S + L +++ +ER+NL N+W S W S+W+++ D L G+I + HY+EDGN+QL K+ S + A +V+ I+ E + N+E +S E +RR +PV++ KM WS
Sbjct: 1 MEGEYAHVSDDEKLAVATRLLLSSPPGEIRDVAKDVVKLLPAGLLTDAKLRGVLRAYNVKHCTGVMTPEGTHRVVICQAGEVDPTHYIDTKSKKVWGFDHLTQELLAHDVSDCPEKFTMPTEPFRLAVQQALDGYVFTQFANQGAAAVF-STGDNELTIVLSTERINLRNYWCDRDYATATKRVLTSGRWTSQWTLNLDSRVLKGAIDLHVHYYEDGNLQLQSRKAVETTLASTDASVVGAAVVQAIRDEEHVIHSNLEDMYINMSEETFKEMRRVMPVTQTKMEWS 286
BLAST of EWM25137.1 vs. NCBI_GenBank
Match: gi|570313355|gb|ETO61303.1| (hypothetical protein, variant [Phytophthora parasitica P1976]) HSP 1 Score: 110.538 bits (275), Expect = 2.565e-25 Identity = 76/261 (29.12%), Postives = 121/261 (46.36%), Query Frame = 0
Query: 31 HIAEQMLLSSPPGQFGHVLTDLRKLLPASVLTESFVQEVTKVYNAR---------------------------------RGIGLGKV------EEMRNLTEGQ-ERLNMKRQELERALAGHVTESYASDSATTTMCSVKGSTLHVIIYSERVNLANFWSASWLSEWSID----DDKLSGSIQVRAHYFEDGNVQLHVNKSY-PVLSVSLRSDTA-IIVECIKLAEETLSKNIEATCQELSTEGLHSLRRKLPVSKVKMNWS 245
IA++ LL+SPPGQ VL D+ KL+PA VL ++ ++ YN + R +G + E++ + E + +RQE+++ L ++ Y T + G+ L V + +ER+NL NFW W S W +D K+ G+IQ+ HYFE+GN+QL +K ++V D I+ +K AE+ L N+E +S E +RR +PV++ KM WS
Sbjct: 17 QIAQRFLLASPPGQIHEVLRDVAKLVPAHVLPDAALRGALHAYNVKNCLPVDVPDADYKILICEEGEVDAAHYVDPIGNRVLGFDHIKQQIVAEDVAEIPEDRVTDFEKERQEVQKTLQSYLQFEYMH--GGTAGVYIVGTKLVVNLCTERINLRNFWGGRWNSRWEVDLTANPSKVKGTIQLHVHYFENGNLQLQNSKDIEEEITVQRPGDLGDAILRVMKEAEDDLQTNLEDMYINMSEETFKEMRRVMPVTQTKMEWS 275
BLAST of EWM25137.1 vs. NCBI_GenBank
Match: gi|570967466|gb|ETP30585.1| (hypothetical protein F442_20430 [Phytophthora parasitica P10297]) HSP 1 Score: 109.383 bits (272), Expect = 6.910e-25 Identity = 76/261 (29.12%), Postives = 119/261 (45.59%), Query Frame = 0
Query: 31 HIAEQMLLSSPPGQFGHVLTDLRKLLPASVLTESFVQEVTKVYNAR---------------------------------RGIGLGKV------EEMRNLTEGQ-ERLNMKRQELERALAGHVTESYASDSATTTMCSVKGSTLHVIIYSERVNLANFWSASWLSEWSID----DDKLSGSIQVRAHYFEDGNVQLHVNKSYPVLSVSLRSDTA--IIVECIKLAEETLSKNIEATCQELSTEGLHSLRRKLPVSKVKMNWS 245
IA++ LL+SPPGQ VL D+ KL+PA VL ++ ++ YN + R +G + E++ + E + +RQE+++ L ++ Y T + G+ L V + +ER+NL NFW W S W +D K+ G+IQ+ HYFE+GN+QL +K RS I+ +K AE+ L N+E +S E +RR +PV++ KM WS
Sbjct: 17 QIAQRFLLASPPGQIHEVLRDVAKLVPAHVLPDAALRGALHAYNVKNCLPVDVPDADYKILICEEGEVDAAHYVDPIGNRVLGFDHIKQQIVAEDVAEIPEDRVTDFEKERQEVQKTLQSYLQFEYMH--GGTAGVYIVGTKLVVNLCTERINLRNFWGGRWNSRWEVDLTANPSKVKGTIQLHVHYFENGNLQLQNSKDIEEEITVQRSGGLGDAILRVMKEAEDDLQTNLEDMYINMSEETFKEMRRVMPVTQTKMEWS 275
BLAST of EWM25137.1 vs. NCBI_GenBank
Match: gi|570313354|gb|ETO61302.1| (hypothetical protein F444_20640 [Phytophthora parasitica P1976]) HSP 1 Score: 109.383 bits (272), Expect = 9.021e-25 Identity = 76/264 (28.79%), Postives = 121/264 (45.83%), Query Frame = 0
Query: 31 HIAEQMLLSSPPGQFGHVLTDLRKLLPASVLTESFVQEVTKVYNAR------------------------------------RGIGLGKV------EEMRNLTEGQ-ERLNMKRQELERALAGHVTESYASDSATTTMCSVKGSTLHVIIYSERVNLANFWSASWLSEWSID----DDKLSGSIQVRAHYFEDGNVQLHVNKSY-PVLSVSLRSDTA-IIVECIKLAEETLSKNIEATCQELSTEGLHSLRRKLPVSKVKMNWS 245
IA++ LL+SPPGQ VL D+ KL+PA VL ++ ++ YN + R +G + E++ + E + +RQE+++ L ++ Y T + G+ L V + +ER+NL NFW W S W +D K+ G+IQ+ HYFE+GN+QL +K ++V D I+ +K AE+ L N+E +S E +RR +PV++ KM WS
Sbjct: 17 QIAQRFLLASPPGQIHEVLRDVAKLVPAHVLPDAALRGALHAYNVKNCLPVDVPDADYKVCKILICEEGEVDAAHYVDPIGNRVLGFDHIKQQIVAEDVAEIPEDRVTDFEKERQEVQKTLQSYLQFEYMH--GGTAGVYIVGTKLVVNLCTERINLRNFWGGRWNSRWEVDLTANPSKVKGTIQLHVHYFENGNLQLQNSKDIEEEITVQRPGDLGDAILRVMKEAEDDLQTNLEDMYINMSEETFKEMRRVMPVTQTKMEWS 278
BLAST of EWM25137.1 vs. NCBI_GenBank
Match: gi|813164828|ref|XP_012203474.1| (hypothetical protein SPRG_08855 [Saprolegnia parasitica CBS 223.65] >gi|641531860|gb|KDO25914.1| hypothetical protein SPRG_08855 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 108.997 bits (271), Expect = 1.307e-24 Identity = 72/263 (27.38%), Postives = 126/263 (47.91%), Query Frame = 0
Query: 27 DHRQHIAEQMLLSSPPGQFGHVLTDLRKLLPASVLTESFVQEVTKVYNARRGIGL--------------GKVEEMRNLTEGQER---LNMKRQELE-----------------------RALAGHVTESYASDSATTTMCSVKGSTLHVIIYSERVNLANFWSASWLSEWSIDDD--KLSGSIQVRAHYFEDGNVQLHVNKSYPVLSVSLRSDT--AIIVECIKLAEETLSKNIEATCQELSTEGLHSLRRKLPVSKVKMNWS 245
D + IA Q+LLS+PPG+ V D+ KLLPA +L+++ ++ YN + +G+ G+V+ L ++ + QEL+ +AL + +A+ A + + L +++ +ERVNL N+WS W S+W+++ + L+G+I + HY+EDGN+QL +K+ + T A +V+ I+ E + N+E +S E +RR +PV++ KM WS
Sbjct: 12 DEKLKIANQLLLSAPPGEIRDVAKDVTKLLPAGLLSDAKLRSAMHAYNTKNCVGVMAPEGTHRVIICKEGEVDPTHYLDTKTKKVWGFDHVTQELQAHDARDAADMFVLPAEPFRLAVHQALDDYAFTQFANQGAVAVYAT-SPNELAIVLSTERVNLRNYWSGRWKSQWTLNLETRALTGTIDLHVHYYEDGNLQLQSHKTTEKTLTFHDASTVGAAVVQVIRDEEHVIHSNLEDMYINMSEETFKEMRRVMPVTQTKMEWS 273
BLAST of EWM25137.1 vs. NCBI_GenBank
Match: gi|568035212|gb|ETM32864.1| (hypothetical protein L914_19811 [Phytophthora parasitica]) HSP 1 Score: 108.612 bits (270), Expect = 1.494e-24 Identity = 74/262 (28.24%), Postives = 122/262 (46.56%), Query Frame = 0
Query: 31 HIAEQMLLSSPPGQFGHVLTDLRKLLPASVLTESFVQEVTKVYNAR---------------------------------RGIGLGKV------EEMRNLTEGQ-ERLNMKRQELERALAGHVTESYASDSATTTMCSVKGSTLHVIIYSERVNLANFWSASWLSEWSID----DDKLSGSIQVRAHYFEDGNVQLHVNKSYPVLSVSLRSDTAI---IVECIKLAEETLSKNIEATCQELSTEGLHSLRRKLPVSKVKMNWS 245
IA++ LL+SPPGQ VL D+ KL+PA VL ++ ++ YN + R +G + E++ + E + +RQE+++ L ++ Y T + G+ L V + +ER+NL NFW W S W +D K+ G+IQ+ HYFE+GN+QL +K ++++ + I+ +K AE+ L N+E +S E +RR +PV++ KM WS
Sbjct: 17 QIAQRFLLASPPGQIHEVLRDVAKLVPAHVLPDAALRGALHAYNVKNCLPVDVPDADYKILICEEGEVDAAHYVDPIGNRVLGFDHIKQQIVAEDVAEIPEDRVTDFEKERQEVQKTLQSYLQFEYMH--GGTAGVYIVGTKLVVNLCTERINLRNFWGGRWNSRWEVDLTANPSKVKGTIQLHVHYFENGNLQLQNSKDIEE-EITVQRPGGLGDAILRVMKEAEDDLQTNLEDMYINMSEETFKEMRRVMPVTQTKMEWS 275
BLAST of EWM25137.1 vs. NCBI_GenBank
Match: gi|675178037|ref|XP_008897903.1| (hypothetical protein PPTG_05916 [Phytophthora parasitica INRA-310] >gi|566009675|gb|ETI32586.1| hypothetical protein F443_20623 [Phytophthora parasitica P1569] >gi|568005319|gb|ETL79620.1| hypothetical protein L917_19776 [Phytophthora parasitica] >gi|568102121|gb|ETN16803.1| hypothetical protein PPTG_05916 [Phytophthora parasitica INRA-310]) HSP 1 Score: 108.227 bits (269), Expect = 2.129e-24 Identity = 74/262 (28.24%), Postives = 122/262 (46.56%), Query Frame = 0
Query: 31 HIAEQMLLSSPPGQFGHVLTDLRKLLPASVLTESFVQEVTKVYNAR---------------------------------RGIGLGKV------EEMRNLTEGQ-ERLNMKRQELERALAGHVTESYASDSATTTMCSVKGSTLHVIIYSERVNLANFWSASWLSEWSID----DDKLSGSIQVRAHYFEDGNVQLHVNKSYPVLSVSLRSDTAI---IVECIKLAEETLSKNIEATCQELSTEGLHSLRRKLPVSKVKMNWS 245
IA++ LL+SPPGQ VL D+ KL+PA VL ++ ++ YN + R +G + E++ + E + +RQE+++ L ++ Y T + G+ L V + +ER+NL NFW W S W +D K+ G+IQ+ HYFE+GN+QL +K ++++ + I+ +K AE+ L N+E +S E +RR +PV++ KM WS
Sbjct: 17 QIAQRFLLASPPGQIHEVLRDVAKLVPAHVLPDAALRGALHAYNVKNCLPVDVPDADYKILICEEGEVDAAHYVDPIGNRVLGFDHIKQQIVAEDVAEIPEDRVTDFEKERQEVQKTLQSYLQFEYMH--GGTAGVYIVGTKLVVNLCTERINLRNFWGGRWNSRWEVDLTANPAKVKGTIQLHVHYFENGNLQLQNSKDIEE-EITVQRPGGLGDAILRVMKEAEDDLQTNLEDMYINMSEETFKEMRRVMPVTQTKMEWS 275
BLAST of EWM25137.1 vs. NCBI_GenBank
Match: gi|567947162|gb|ETK72954.1| (hypothetical protein L915_20037 [Phytophthora parasitica] >gi|567975859|gb|ETL26394.1| hypothetical protein L916_19914 [Phytophthora parasitica] >gi|570937167|gb|ETP02424.1| hypothetical protein F441_20493 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 108.227 bits (269), Expect = 2.314e-24 Identity = 74/262 (28.24%), Postives = 122/262 (46.56%), Query Frame = 0
Query: 31 HIAEQMLLSSPPGQFGHVLTDLRKLLPASVLTESFVQEVTKVYNAR---------------------------------RGIGLGKV------EEMRNLTEGQ-ERLNMKRQELERALAGHVTESYASDSATTTMCSVKGSTLHVIIYSERVNLANFWSASWLSEWSID----DDKLSGSIQVRAHYFEDGNVQLHVNKSYPVLSVSLRSDTAI---IVECIKLAEETLSKNIEATCQELSTEGLHSLRRKLPVSKVKMNWS 245
IA++ LL+SPPGQ VL D+ KL+PA VL ++ ++ YN + R +G + E++ + E + +RQE+++ L ++ Y T + G+ L V + +ER+NL NFW W S W +D K+ G+IQ+ HYFE+GN+QL +K ++++ + I+ +K AE+ L N+E +S E +RR +PV++ KM WS
Sbjct: 17 QIAQRFLLASPPGQIHEVLRDVAKLVPAHVLPDAALRGALHAYNVKNCLPVDVPDADYKILICEEGEVDAAHYVDPISNRVLGFDHIKQQIVAEDVAEIPEDRVTDFEKERQEVQKTLQSYLQFEYMH--GGTAGVYIVGTKLVVNLCTERINLRNFWGGRWNSRWEVDLTANPAKVKGTIQLHVHYFENGNLQLQNSKDIEE-EITVQRPGGLGDAILRVMKEAEDDLQTNLEDMYINMSEETFKEMRRVMPVTQTKMEWS 275
BLAST of EWM25137.1 vs. NCBI_GenBank
Match: gi|669164866|ref|XP_008617995.1| (hypothetical protein SDRG_13677 [Saprolegnia diclina VS20] >gi|530730356|gb|EQC28598.1| hypothetical protein SDRG_13677 [Saprolegnia diclina VS20]) HSP 1 Score: 107.457 bits (267), Expect = 3.941e-24 Identity = 72/263 (27.38%), Postives = 125/263 (47.53%), Query Frame = 0
Query: 27 DHRQHIAEQMLLSSPPGQFGHVLTDLRKLLPASVLTESFVQEVTKVYNARRGIGL--------------GKVEEMRNLTEGQER---LNMKRQELE-----------------------RALAGHVTESYASDSATTTMCSVKGSTLHVIIYSERVNLANFWSASWLSEWSIDDDK--LSGSIQVRAHYFEDGNVQLHVNKSYPVLSVSLRSDT--AIIVECIKLAEETLSKNIEATCQELSTEGLHSLRRKLPVSKVKMNWS 245
D + +IA +LLS+PPG+ V D+ KLLPA +L+++ ++ YN + +G+ G+V+ L ++ + QEL+ +AL + +A+ A + L +++ +ERVNL N+WS W S+W+++ + L+G+I + HY+EDGN+QL +KS + T A +V+ I+ E + N+E +S E +RR +PV++ KM WS
Sbjct: 12 DEKLNIANHLLLSAPPGEIRDVAKDVTKLLPAGLLSDAKLRSAMHAYNTKNCVGVMAPEGTHRVIICKEGEVDPTHYLDTKTKKVWGFDHVTQELQAQDARDAADLFVLPAEPFRLAVHQALDDYAFTQFANQGAVAVYAT-SPQELAIVLSTERVNLRNYWSGRWKSQWTLNLETRVLTGAIDLHVHYYEDGNLQLQSHKSTEKTLTFHDASTVGAAVVQVIRDEEHVIHSNLEDMYINMSEETFKEMRRVMPVTQTKMEWS 273 The following BLAST results are available for this feature:
BLAST of EWM25137.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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