EWM25092.1, cds5547 (CDS) Nannochloropsis gaditana

Overview
NameEWM25092.1
Unique Namecds5547
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:291081..291587 +
Alignment locationCM002466.1:291717..291947 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25092.1
Productappr-1-p processing enzyme family protein
Orig transcript idgnl|cribi|Naga_100016g47.2901.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:291081..291587 +
CM002466.1supercontigCM002466.1:291717..291947 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR002589Macro_dom
Homology
BLAST of EWM25092.1 vs. NCBI_GenBank
Match: gi|585106730|gb|EWM25092.1| (appr-1-p processing enzyme family protein [Nannochloropsis gaditana])

HSP 1 Score: 501.901 bits (1291), Expect = 1.061e-179
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0
Query:    1 MADCGGKAAASILRRSFPLSNRISLQISVGDLTKCSVDAIVNAANERMLGGGGVDGAVHRAAGPQLYEACRAVPEVRPGVRCPTGEARITPGFKLPARYVVHTVGPIYKNDNESAALLRASHLSSLDLAVKQGLTSVAFPAVSCGIYGYPVSRASHIAVKSCIDFGDEQGLNSPLRNIEFVLFSQDIYNAWVAAAEDLVHRSTRTSAENESRGRETSTSSGSASSEVDFDPRTRGEKEKCENADI 245
            MADCGGKAAASILRRSFPLSNRISLQISVGDLTKCSVDAIVNAANERMLGGGGVDGAVHRAAGPQLYEACRAVPEVRPGVRCPTGEARITPGFKLPARYVVHTVGPIYKNDNESAALLRASHLSSLDLAVKQGLTSVAFPAVSCGIYGYPVSRASHIAVKSCIDFGDEQGLNSPLRNIEFVLFSQDIYNAWVAAAEDLVHRSTRTSAENESRGRETSTSSGSASSEVDFDPRTRGEKEKCENADI
Sbjct:    1 MADCGGKAAASILRRSFPLSNRISLQISVGDLTKCSVDAIVNAANERMLGGGGVDGAVHRAAGPQLYEACRAVPEVRPGVRCPTGEARITPGFKLPARYVVHTVGPIYKNDNESAALLRASHLSSLDLAVKQGLTSVAFPAVSCGIYGYPVSRASHIAVKSCIDFGDEQGLNSPLRNIEFVLFSQDIYNAWVAAAEDLVHRSTRTSAENESRGRETSTSSGSASSEVDFDPRTRGEKEKCENADI 245          
BLAST of EWM25092.1 vs. NCBI_GenBank
Match: gi|553196255|ref|XP_005856302.1| (hypothetical protein NGA_2111400, partial [Nannochloropsis gaditana CCMP526] >gi|422292780|gb|EKU20082.1| hypothetical protein NGA_2111400, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 502.286 bits (1292), Expect = 2.520e-179
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0
Query:    1 MADCGGKAAASILRRSFPLSNRISLQISVGDLTKCSVDAIVNAANERMLGGGGVDGAVHRAAGPQLYEACRAVPEVRPGVRCPTGEARITPGFKLPARYVVHTVGPIYKNDNESAALLRASHLSSLDLAVKQGLTSVAFPAVSCGIYGYPVSRASHIAVKSCIDFGDEQGLNSPLRNIEFVLFSQDIYNAWVAAAEDLVHRSTRTSAENESRGRETSTSSGSASSEVDFDPRTRGEKEKCENADI 245
            MADCGGKAAASILRRSFPLSNRISLQISVGDLTKCSVDAIVNAANERMLGGGGVDGAVHRAAGPQLYEACRAVPEVRPGVRCPTGEARITPGFKLPARYVVHTVGPIYKNDNESAALLRASHLSSLDLAVKQGLTSVAFPAVSCGIYGYPVSRASHIAVKSCIDFGDEQGLNSPLRNIEFVLFSQDIYNAWVAAAEDLVHRSTRTSAENESRGRETSTSSGSASSEVDFDPRTRGEKEKCENADI
Sbjct:   36 MADCGGKAAASILRRSFPLSNRISLQISVGDLTKCSVDAIVNAANERMLGGGGVDGAVHRAAGPQLYEACRAVPEVRPGVRCPTGEARITPGFKLPARYVVHTVGPIYKNDNESAALLRASHLSSLDLAVKQGLTSVAFPAVSCGIYGYPVSRASHIAVKSCIDFGDEQGLNSPLRNIEFVLFSQDIYNAWVAAAEDLVHRSTRTSAENESRGRETSTSSGSASSEVDFDPRTRGEKEKCENADI 280          
BLAST of EWM25092.1 vs. NCBI_GenBank
Match: gi|1009121598|ref|XP_015877544.1| (PREDICTED: macro domain-containing protein VPA0103-like isoform X1 [Ziziphus jujuba] >gi|1009121600|ref|XP_015877545.1| PREDICTED: macro domain-containing protein VPA0103-like isoform X2 [Ziziphus jujuba])

HSP 1 Score: 219.935 bits (559), Expect = 1.789e-68
Identity = 102/190 (53.68%), Postives = 137/190 (72.11%), Query Frame = 0
Query:   17 FPLSNRISLQISVGDLTKC----SVDAIVNAANERMLGGGGVDGAVHRAAGPQLYEACRAVPEVRPGVRCPTGEARITPGFKLPARYVVHTVGPIYKNDNESAALLRASHLSSLDLAVKQGLTSVAFPAVSCGIYGYPVSRASHIAVKSCIDFGDEQGLNSPLRNIEFVLFSQDIYNAWVAAAEDLVHRS 202
            FPLS   S+ I  GD+TK     S DAIVNAA ERMLGGGGVDGA+HRAAGP L +AC  VPEVRPGVRCPTGEARITPGF+LP  YV+HTVGPIY+ +++  A L++++ +SL +A +  +  VAFPA+SCG+YGYP   A+ I++ +  +F ++       + + FVL+++DIYN W+  A +L+  S
Sbjct:   57 FPLSPSYSIVIQRGDITKWFVDGSTDAIVNAAEERMLGGGGVDGAIHRAAGPDLLQACYNVPEVRPGVRCPTGEARITPGFQLPVSYVIHTVGPIYETNSDPEAFLKSAYSNSLKVAKENNVQYVAFPAISCGVYGYPYEEAATISISTVKEFAND------FKEVHFVLYNEDIYNVWLKKANELLQSS 240          
BLAST of EWM25092.1 vs. NCBI_GenBank
Match: gi|1009121608|ref|XP_015877549.1| (PREDICTED: macro domain-containing protein VPA0103-like [Ziziphus jujuba])

HSP 1 Score: 219.935 bits (559), Expect = 2.083e-68
Identity = 102/190 (53.68%), Postives = 137/190 (72.11%), Query Frame = 0
Query:   17 FPLSNRISLQISVGDLTKC----SVDAIVNAANERMLGGGGVDGAVHRAAGPQLYEACRAVPEVRPGVRCPTGEARITPGFKLPARYVVHTVGPIYKNDNESAALLRASHLSSLDLAVKQGLTSVAFPAVSCGIYGYPVSRASHIAVKSCIDFGDEQGLNSPLRNIEFVLFSQDIYNAWVAAAEDLVHRS 202
            FPLS   S+ I  GD+TK     S DAIVNAA ERMLGGGGVDGA+HRAAGP L +AC  VPEVRPGVRCPTGEARITPGF+LP  YV+HTVGPIY+ +++  A L++++ +SL +A +  +  VAFPA+SCG+YGYP   A+ I++ +  +F ++       + + FVL+++DIYN W+  A +L+  S
Sbjct:   57 FPLSPSYSIVIQRGDITKWFVHGSTDAIVNAAEERMLGGGGVDGAIHRAAGPDLLQACYNVPEVRPGVRCPTGEARITPGFQLPVSYVIHTVGPIYETNSDPEAFLKSAYSNSLKVAKENNVQYVAFPAISCGVYGYPYEEAATISISTVKEFAND------FKEVHFVLYNEDIYNVWLKKANELLQSS 240          
BLAST of EWM25092.1 vs. NCBI_GenBank
Match: gi|802778445|ref|XP_012091148.1| (uncharacterized protein LOC105649184 isoform X1 [Jatropha curcas])

HSP 1 Score: 218.394 bits (555), Expect = 2.461e-67
Identity = 102/187 (54.55%), Postives = 137/187 (73.26%), Query Frame = 0
Query:   17 FPLSNRISLQISVGDLTKCSVD----AIVNAANERMLGGGGVDGAVHRAAGPQLYEACRAVPEVRPGVRCPTGEARITPGFKLPARYVVHTVGPIYKNDNESAALLRASHLSSLDLAVKQGLTSVAFPAVSCGIYGYPVSRASHIAVKSCIDFGDEQGLNSPLRNIEFVLFSQDIYNAWVAAAEDLV 199
            FPLS+   L+I+ GD+TK  VD    AIVN ANERMLGGGG DGA+HRAAGP+L +AC  VPEV+PG+RCPTGEARITPGFKLPA +V++TVGPIY  D+  AA L+ ++ +SL +A    +  +AFPA+SCG+YGYP   A+ +++ +  +F D+      L+ + FVLFS DIYN W+  A++L+
Sbjct:   97 FPLSSSSVLKINKGDITKWFVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELLDACYKVPEVQPGIRCPTGEARITPGFKLPASHVIYTVGPIYDTDSNPAASLKNAYRNSLTVAKDNNIKYIAFPAISCGVYGYPYEEAAAVSISTIKEFKDD------LKEVHFVLFSDDIYNVWLKKAKELL 277          
BLAST of EWM25092.1 vs. NCBI_GenBank
Match: gi|552829028|ref|XP_005847605.1| (hypothetical protein CHLNCDRAFT_23080 [Chlorella variabilis] >gi|307107260|gb|EFN55503.1| hypothetical protein CHLNCDRAFT_23080 [Chlorella variabilis])

HSP 1 Score: 214.927 bits (546), Expect = 4.561e-67
Identity = 106/168 (63.10%), Postives = 125/168 (74.40%), Query Frame = 0
Query:   30 GDLTKCSVDAIVNAANERMLGGGGVDGAVHRAAGPQLYEACRAVPEVRPGVRCPTGEARITPGFKLPARYVVHTVGPIYKNDNESAALLRASHLSSLDLAVKQGLTSVAFPAVSCGIYGYPVSRASHIAVKSCIDFGDEQGLNSPLRNIEFVLFSQDIYNAWVAAAED 197
            GDLTK + DAIVNAANERMLGGGGVDGA+HRAAGP L EACR VPEVR GVRCPTGEAR+T G  LPAR V+HTVGP+Y N   SA LL +++ SSL LA + GL +VAFPA+SCGI+GYP   A+ IAV++C      Q     L+ I F LF Q I +AW+ AAE+
Sbjct:   21 GDLTKFAGDAIVNAANERMLGGGGVDGAIHRAAGPSLLEACRQVPEVRQGVRCPTGEARMTTGAGLPARNVIHTVGPVYHNAEASAPLLESAYRSSLQLANQHGLKTVAFPAISCGIFGYPFDEAAEIAVRTC------QQEAGQLQEIHFFLFGQPILDAWLQAAEE 182          
BLAST of EWM25092.1 vs. NCBI_GenBank
Match: gi|255559685|ref|XP_002520862.1| (PREDICTED: macro domain-containing protein VPA0103 [Ricinus communis] >gi|223539993|gb|EEF41571.1| Protein LRP16, putative [Ricinus communis])

HSP 1 Score: 217.238 bits (552), Expect = 5.917e-67
Identity = 100/187 (53.48%), Postives = 137/187 (73.26%), Query Frame = 0
Query:   17 FPLSNRISLQISVGDLTKCSVD----AIVNAANERMLGGGGVDGAVHRAAGPQLYEACRAVPEVRPGVRCPTGEARITPGFKLPARYVVHTVGPIYKNDNESAALLRASHLSSLDLAVKQGLTSVAFPAVSCGIYGYPVSRASHIAVKSCIDFGDEQGLNSPLRNIEFVLFSQDIYNAWVAAAEDLV 199
            FPLS+   L+I+ GD+TK  VD    AIVN ANE+MLGGGG DGA+HRAAGP+L +AC  VPEVRPG+RCPTGEARITPGFKLPA +V+HTVGPIY  +  SAA+L+ ++ +SL +A    +  +AFPA+SCG+Y YP   A+ +++ +  +F D+      ++ + FVLFS +I+N WV  A++L+
Sbjct:   87 FPLSSSSVLKINKGDITKWFVDGSSDAIVNPANEKMLGGGGADGAIHRAAGPELVDACYKVPEVRPGIRCPTGEARITPGFKLPASHVIHTVGPIYDANRNSAAILKNAYRNSLSVAKDNNIKFIAFPAISCGVYLYPFEEAASVSISTIKEFADD------IKEVHFVLFSDEIFNVWVKKAKELL 267          
BLAST of EWM25092.1 vs. NCBI_GenBank
Match: gi|1021586016|ref|XP_016182334.1| (uncharacterized protein LOC107624347 isoform X1 [Arachis ipaensis])

HSP 1 Score: 214.542 bits (545), Expect = 6.251e-67
Identity = 104/187 (55.61%), Postives = 134/187 (71.66%), Query Frame = 0
Query:   17 FPLSNRISLQISVGDLTKCSVD----AIVNAANERMLGGGGVDGAVHRAAGPQLYEACRAVPEVRPGVRCPTGEARITPGFKLPARYVVHTVGPIYKNDNESAALLRASHLSSLDLAVKQGLTSVAFPAVSCGIYGYPVSRASHIAVKSCIDFGDEQGLNSPLRNIEFVLFSQDIYNAWVAAAEDLV 199
            FPLS   SL I  GD+TK S+D    AIVN ANERMLGGGG DGA+H AAGP+L +AC +VPEVRPG+RCPTGEARITPGF+LPA +VVHTVGPIY +++  AA L +++ +SL +A  + +  +AFPA+SCG++GYP   A+ +A+    +F +E       + I FVLF QDIY  WV  A DL+
Sbjct:   17 FPLSPSSSLVIQKGDITKWSIDGSSDAIVNPANERMLGGGGADGAIHMAAGPELVQACYSVPEVRPGIRCPTGEARITPGFRLPASHVVHTVGPIYNSNSNPAASLSSAYRNSLRVAKDKNIQYIAFPAISCGVFGYPYDEAATVAISVVREFRNE------FKEIHFVLFLQDIYQVWVNKANDLM 197          
BLAST of EWM25092.1 vs. NCBI_GenBank
Match: gi|502124370|ref|XP_004498498.1| (PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD2 [Cicer arietinum])

HSP 1 Score: 215.312 bits (547), Expect = 7.816e-67
Identity = 101/187 (54.01%), Postives = 135/187 (72.19%), Query Frame = 0
Query:   17 FPLSNRISLQISVGDLTKCSVD----AIVNAANERMLGGGGVDGAVHRAAGPQLYEACRAVPEVRPGVRCPTGEARITPGFKLPARYVVHTVGPIYKNDNESAALLRASHLSSLDLAVKQGLTSVAFPAVSCGIYGYPVSRASHIAVKSCIDFGDEQGLNSPLRNIEFVLFSQDIYNAWVAAAEDLV 199
            FPLS+  +L I  GD+TK S+D    AIVN ANERMLGGGG DGA+HRAAGP L  ACR VPEVRPG+RCPTGEARITPGF LPA +V+HTVGPIY  DN  AA L +++ +SL +A +  +  +AFPA+SCG+YGYP   A+ +A+ +  +F ++       + + FVLF+ DIY+ W+  +++L+
Sbjct:   48 FPLSSSSALIIQKGDITKWSIDGSTDAIVNPANERMLGGGGADGAIHRAAGPDLLRACRNVPEVRPGIRCPTGEARITPGFLLPASHVIHTVGPIYNADNNPAASLASAYRNSLRVAKESNIQYIAFPAISCGVYGYPYDEAATVAISTIKEFQND------FKEVHFVLFASDIYDIWLNKSDELL 228          
BLAST of EWM25092.1 vs. NCBI_GenBank
Match: gi|731320101|ref|XP_010670626.1| (PREDICTED: uncharacterized protein LOC104887643 [Beta vulgaris subsp. vulgaris] >gi|870865744|gb|KMT16782.1| hypothetical protein BVRB_2g042690 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 216.083 bits (549), Expect = 7.955e-67
Identity = 104/187 (55.61%), Postives = 134/187 (71.66%), Query Frame = 0
Query:   19 LSNRISLQISVGDLTKCSVD----AIVNAANERMLGGGGVDGAVHRAAGPQLYEACRAVPEVRPGVRCPTGEARITPGFKLPARYVVHTVGPIYKNDNESAALLRASHLSSLDLAVKQGLTSVAFPAVSCGIYGYPVSRASHIAVKSCIDFGDEQGLNSPLRNIEFVLFSQDIYNAWVAAAEDLVHR 201
            LS   SL+I  GD+T+ S+D    AIVNAANERMLGGGGVDGA+HRAAGP+L EAC  VPEVRPGVRCPTGEARITPGF+LPA +V+HTVGPIY        LL+ ++ +SL +A +  +  +AFPA+SCG+YGYP   A+ IAV +  +F ++       + + FVLFS DIYN W+  A+ +V +
Sbjct:   65 LSPSSSLKIQKGDITQWSIDGSSDAIVNAANERMLGGGGVDGAIHRAAGPELKEACYKVPEVRPGVRCPTGEARITPGFRLPASHVIHTVGPIYDVVQNPEVLLKNAYRNSLMVAKENNIQYIAFPAISCGVYGYPFDEAATIAVSTVEEFAND------FKEVSFVLFSDDIYNVWLDKAKAIVEK 245          
The following BLAST results are available for this feature:
BLAST of EWM25092.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106730|gb|EWM25092.1|1.061e-179100.00appr-1-p processing enzyme family protein [Nannoch... [more]
gi|553196255|ref|XP_005856302.1|2.520e-179100.00hypothetical protein NGA_2111400, partial [Nannoch... [more]
gi|1009121598|ref|XP_015877544.1|1.789e-6853.68PREDICTED: macro domain-containing protein VPA0103... [more]
gi|1009121608|ref|XP_015877549.1|2.083e-6853.68PREDICTED: macro domain-containing protein VPA0103... [more]
gi|802778445|ref|XP_012091148.1|2.461e-6754.55uncharacterized protein LOC105649184 isoform X1 [J... [more]
gi|552829028|ref|XP_005847605.1|4.561e-6763.10hypothetical protein CHLNCDRAFT_23080 [Chlorella v... [more]
gi|255559685|ref|XP_002520862.1|5.917e-6753.48PREDICTED: macro domain-containing protein VPA0103... [more]
gi|1021586016|ref|XP_016182334.1|6.251e-6755.61uncharacterized protein LOC107624347 isoform X1 [A... [more]
gi|502124370|ref|XP_004498498.1|7.816e-6754.01PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD2... [more]
gi|731320101|ref|XP_010670626.1|7.955e-6755.61PREDICTED: uncharacterized protein LOC104887643 [B... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5561rna5561Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications