EWM25105.1, cds5546 (CDS) Nannochloropsis gaditana

Overview
NameEWM25105.1
Unique Namecds5546
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:288667..289974 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25105.1
Productcalreticulin precursor
Orig transcript idgnl|cribi|Naga_100016g48.2914.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:288667..289974 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006810transport
GO:0042221response to chemical
GO:0016043cellular component organization
GO:0007165signal transduction
GO:0009605response to external stimulus
GO:0009607response to biotic stimulus
GO:0006457protein folding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005783endoplasmic reticulum
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0051082unfolded protein binding
GO:0005509calcium ion binding
Vocabulary: INTERPRO
TermDefinition
IPR018124Calret/calnex_CS
IPR009033Calreticulin/calnexin_P_dom
IPR013320ConA-like_dom
IPR009169Calreticulin
IPR001580Calret/calnex
Homology
BLAST of EWM25105.1 vs. NCBI_GenBank
Match: gi|553196150|ref|XP_005856278.1| (calreticulin, partial [Nannochloropsis gaditana CCMP526] >gi|422292756|gb|EKU20058.1| calreticulin, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 887.486 bits (2292), Expect = 0.000e+0
Identity = 435/435 (100.00%), Postives = 435/435 (100.00%), Query Frame = 0
Query:    1 MISRGLLAVGLLTASTSATVYFTENFDDKWESRWVVPSKWKAAEEIGEWAHTAGEWFGDAADKGIKTSQDARFYGLSAKLAKPFSNEGKDLVLQYVVKHEQRLDCGGAYIKLLGPELDQASFGGDTPYQIMFGPDVCGSTKRTHVIFNYPEAKGEDKNLLIKTDVPTRTDQLSHLYTLHIMAANNSFNVLIDGESVREGSLEESWDFRPPKTIPDPEQSKPADWVDEEMMADPADVKPEGYDDIPATLPDSEAVQPEDWDEEEDGVWEAPMVDNPDYKGPWSPKMIPNPDYKGAWEHPHIPNPEYSPDPKLHARATEVTAVGFELWQVKSGTMFDDIILTDSLDEATEYAKETFWKKQEGEKAMFEKAEEERVEKEKAEREEMKKKAEENGEPFEEGDSPFSVSDMEITEDEDEDDEDWEDEEEEDDENSFTMEL 435
            MISRGLLAVGLLTASTSATVYFTENFDDKWESRWVVPSKWKAAEEIGEWAHTAGEWFGDAADKGIKTSQDARFYGLSAKLAKPFSNEGKDLVLQYVVKHEQRLDCGGAYIKLLGPELDQASFGGDTPYQIMFGPDVCGSTKRTHVIFNYPEAKGEDKNLLIKTDVPTRTDQLSHLYTLHIMAANNSFNVLIDGESVREGSLEESWDFRPPKTIPDPEQSKPADWVDEEMMADPADVKPEGYDDIPATLPDSEAVQPEDWDEEEDGVWEAPMVDNPDYKGPWSPKMIPNPDYKGAWEHPHIPNPEYSPDPKLHARATEVTAVGFELWQVKSGTMFDDIILTDSLDEATEYAKETFWKKQEGEKAMFEKAEEERVEKEKAEREEMKKKAEENGEPFEEGDSPFSVSDMEITEDEDEDDEDWEDEEEEDDENSFTMEL
Sbjct:   14 MISRGLLAVGLLTASTSATVYFTENFDDKWESRWVVPSKWKAAEEIGEWAHTAGEWFGDAADKGIKTSQDARFYGLSAKLAKPFSNEGKDLVLQYVVKHEQRLDCGGAYIKLLGPELDQASFGGDTPYQIMFGPDVCGSTKRTHVIFNYPEAKGEDKNLLIKTDVPTRTDQLSHLYTLHIMAANNSFNVLIDGESVREGSLEESWDFRPPKTIPDPEQSKPADWVDEEMMADPADVKPEGYDDIPATLPDSEAVQPEDWDEEEDGVWEAPMVDNPDYKGPWSPKMIPNPDYKGAWEHPHIPNPEYSPDPKLHARATEVTAVGFELWQVKSGTMFDDIILTDSLDEATEYAKETFWKKQEGEKAMFEKAEEERVEKEKAEREEMKKKAEENGEPFEEGDSPFSVSDMEITEDEDEDDEDWEDEEEEDDENSFTMEL 448          
BLAST of EWM25105.1 vs. NCBI_GenBank
Match: gi|585106743|gb|EWM25105.1| (calreticulin precursor [Nannochloropsis gaditana])

HSP 1 Score: 885.945 bits (2288), Expect = 0.000e+0
Identity = 435/435 (100.00%), Postives = 435/435 (100.00%), Query Frame = 0
Query:    1 MISRGLLAVGLLTASTSATVYFTENFDDKWESRWVVPSKWKAAEEIGEWAHTAGEWFGDAADKGIKTSQDARFYGLSAKLAKPFSNEGKDLVLQYVVKHEQRLDCGGAYIKLLGPELDQASFGGDTPYQIMFGPDVCGSTKRTHVIFNYPEAKGEDKNLLIKTDVPTRTDQLSHLYTLHIMAANNSFNVLIDGESVREGSLEESWDFRPPKTIPDPEQSKPADWVDEEMMADPADVKPEGYDDIPATLPDSEAVQPEDWDEEEDGVWEAPMVDNPDYKGPWSPKMIPNPDYKGAWEHPHIPNPEYSPDPKLHARATEVTAVGFELWQVKSGTMFDDIILTDSLDEATEYAKETFWKKQEGEKAMFEKAEEERVEKEKAEREEMKKKAEENGEPFEEGDSPFSVSDMEITEDEDEDDEDWEDEEEEDDENSFTMEL 435
            MISRGLLAVGLLTASTSATVYFTENFDDKWESRWVVPSKWKAAEEIGEWAHTAGEWFGDAADKGIKTSQDARFYGLSAKLAKPFSNEGKDLVLQYVVKHEQRLDCGGAYIKLLGPELDQASFGGDTPYQIMFGPDVCGSTKRTHVIFNYPEAKGEDKNLLIKTDVPTRTDQLSHLYTLHIMAANNSFNVLIDGESVREGSLEESWDFRPPKTIPDPEQSKPADWVDEEMMADPADVKPEGYDDIPATLPDSEAVQPEDWDEEEDGVWEAPMVDNPDYKGPWSPKMIPNPDYKGAWEHPHIPNPEYSPDPKLHARATEVTAVGFELWQVKSGTMFDDIILTDSLDEATEYAKETFWKKQEGEKAMFEKAEEERVEKEKAEREEMKKKAEENGEPFEEGDSPFSVSDMEITEDEDEDDEDWEDEEEEDDENSFTMEL
Sbjct:    1 MISRGLLAVGLLTASTSATVYFTENFDDKWESRWVVPSKWKAAEEIGEWAHTAGEWFGDAADKGIKTSQDARFYGLSAKLAKPFSNEGKDLVLQYVVKHEQRLDCGGAYIKLLGPELDQASFGGDTPYQIMFGPDVCGSTKRTHVIFNYPEAKGEDKNLLIKTDVPTRTDQLSHLYTLHIMAANNSFNVLIDGESVREGSLEESWDFRPPKTIPDPEQSKPADWVDEEMMADPADVKPEGYDDIPATLPDSEAVQPEDWDEEEDGVWEAPMVDNPDYKGPWSPKMIPNPDYKGAWEHPHIPNPEYSPDPKLHARATEVTAVGFELWQVKSGTMFDDIILTDSLDEATEYAKETFWKKQEGEKAMFEKAEEERVEKEKAEREEMKKKAEENGEPFEEGDSPFSVSDMEITEDEDEDDEDWEDEEEEDDENSFTMEL 435          
BLAST of EWM25105.1 vs. NCBI_GenBank
Match: gi|224003875|ref|XP_002291609.1| (calreticulin-like protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220973385|gb|EED91716.1| calreticulin-like protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 430.639 bits (1106), Expect = 2.395e-146
Identity = 222/374 (59.36%), Postives = 290/374 (77.54%), Query Frame = 0
Query:    7 LAVGLLTASTSATVYFTENF-DDKWESRWVVPSKWKAAEEIGEWAHTAGEWFGDAADKGIKTSQDARFYGLSAKLAKPF-SNEGKDLVLQYVVKHEQRLDCGGAYIKLL--GPELDQASFGGDTPYQIMFGPDVCGST-KRTHVIFNYPEAKGEDKNLLIKTDVPTRTDQLSHLYTLHIMAANNSFNVLIDGESVREGSLEESWDFRPPKTIPDPEQSKPADWVDEEMMADPADVKPEGYDDIPATLPDSEAVQPEDWDEEEDGVWEAPMVDNPDYKGPWSPKMIPNPDYKGAWEHPHIPNPEYSPDPKLHARATE-VTAVGFELWQVKSGTMFDDIILTDSLDEATEYAKETFWKKQEGEKAMFEKAEEERVE 374
            +   +L A ++A +YF E F DD W+ RW + S WK++ E+GEW+HTAG+W GDA DKGIKTS DARFYGLSA L+K F S++ KDLV+QY VKHEQ++DCGGAY+KLL  G + +   FGGDTPY +MFGPD+CGS+ KRTHVIF+Y +   +D+NLLIK +V    +QLSHLYTL ++  +N+F V +D +SVR G LE+ +DF P + I DP +SKPADWV+E+ + DP DVKPEGYD+IPA +PD +A +P+DWD+E+DG WE PMVDNP+YKGPW PKMI NPDYKG W HP IPNPEY  D  ++A   +  T VGFELWQVK+GT+FDDII+TDSL+EA ++A+ETF+KK++ EK MF+ A+++  E
Sbjct:    6 VLASVLMAPSAAEIYFKEQFNDDAWKDRWTIASDWKSSSELGEWSHTAGDWHGDAQDKGIKTSTDARFYGLSAPLSKTFNSSDKKDLVIQYSVKHEQKIDCGGAYLKLLPGGDKFEAKKFGGDTPYGVMFGPDICGSSNKRTHVIFHYDK---KDENLLIKKNVGCEDNQLSHLYTL-VLRPDNTFEVFVDNKSVRSGKLEDEFDFLPDEKIKDPNESKPADWVEEKKIPDPEDVKPEGYDEIPAEIPDPDAAKPDDWDDEDDGEWEPPMVDNPEYKGPWKPKMIDNPDYKGPWVHPMIPNPEYEYDENMYAVCKDGCTHVGFELWQVKAGTLFDDIIVTDSLEEAQKFAEETFFKKKDAEKEMFDAAQKKDRE 375          
BLAST of EWM25105.1 vs. NCBI_GenBank
Match: gi|298711697|emb|CBJ32747.1| (Calreticulin [Ectocarpus siliculosus])

HSP 1 Score: 430.254 bits (1105), Expect = 1.323e-145
Identity = 228/359 (63.51%), Postives = 276/359 (76.88%), Query Frame = 0
Query:    8 AVGLLTASTSATVYFTENFDDK-WESRWVVPSKWKAAEEIGEWAHTAGEWFGDAAD-KGIKTSQDARFYGLSAKLAKPFSNEGKDLVLQYVVKHEQRLDCGGAYIKLLGPELDQASFGGDTPYQIMFGPDVCG-STKRTHVIFNYP-EAKGEDKNLLIKTDVPTRTDQLSHLYTLHIMAANNSFNVLIDGESVREGSLEESWDFRPPKTIPDPEQSKPADWVDEEMMADPADVKPEGYDDIPATLPDSEAVQPEDWDEEEDGVWEAPMVDNPDYKGPWSPKMIPNPDYKGAWEHPHIPNPEYSPDPKLHARATEVTAVGFELWQVKSGTMFDDIILTDSLDEATEYAKETFWKKQEGEK 362
             + LL     A +Y  E FDD+ W  RW VP+KWK A+E+GEW  TAGEW+G +AD KGI+TS+  RFYGLSAKLA+PF+NEGKDLVLQ  +K+EQ+LDCGGAYIKL G ++DQ SFGGDTPYQIMFGPD CG S  RTHVIFNYP + +G+D NLLIK DV    DQ SHLYTLH+   + +F V ID ESVR GSLE+ +DF  PK I DP QSKP DWVDE+ + DP DVKPEGYDDIP+ +PD +A +PEDWDEEEDG WE  M+ NP+YKG W PKMIPNPDYKG WEHP +PNP+Y  D  L  R T+ T VGFELWQV +GT+FD+I++TDSL+EA ++A+ET+  K++ EK
Sbjct:   12 VIPLLLDVGQAKIYLQEKFDDEGWRERWTVPTKWKPADELGEWGWTAGEWYGGSADDKGIQTSESNRFYGLSAKLAEPFTNEGKDLVLQLSIKNEQKLDCGGAYIKLTG-DMDQDSFGGDTPYQIMFGPDKCGTSNARTHVIFNYPPKGEGDDGNLLIKKDVKMEKDQASHLYTLHV-KPDGTFEVFIDQESVRAGSLEDEFDFLAPKEIKDPGQSKPEDWVDEKKIPDPEDVKPEGYDDIPSEIPDPKAEKPEDWDEEEDGEWEPTMIKNPEYKGKWKPKMIPNPDYKGPWEHPMVPNPDYKEDKTLGKRCTDCTHVGFELWQVTAGTIFDEILVTDSLEEAQKFAEETWATKKDKEK 368          
BLAST of EWM25105.1 vs. NCBI_GenBank
Match: gi|1210527110|dbj|GAX14083.1| (calreticulin [Fistulifera solaris])

HSP 1 Score: 421.779 bits (1083), Expect = 1.459e-142
Identity = 205/351 (58.40%), Postives = 262/351 (74.64%), Query Frame = 0
Query:   21 YFTENFDDK-WESRWVVPSKWKAAEEIGEWAHTAGEWFGDAADKGIKTSQDARFYGLSAKLAKPFSNEGKDLVLQYVVKHEQRLDCGGAYIKLL--GPELDQASFGGDTPYQIMFGPDVCGS-TKRTHVIFNYPEAKGEDKNLLIKTDVPTRTDQLSHLYTLHIMAANNSFNVLIDGESVREGSLEESWDFRPPKTIPDPEQSKPADWVDEEMMADPADVKPEGYDDIPATLPDSEAVQPEDWDEEEDGVWEAPMVDNPDYKGPWSPKMIPNPDYKGAWEHPHIPNPEYSPDPKLHARATE-VTAVGFELWQVKSGTMFDDIILTDSLDEATEYAKETFWKKQEGEKAMFE 366
            +  E F+D+ W++RW VPS WK+  E+GEW HTAG +F D  D+GI+TS++ RFYGLSAK+ KPF +  K+LV+QY V+HEQ+LDCGGAYIKLL  G   D   FGGDTPY +MFGPD+CGS  KRTHVI NYP AK E  NLLI  ++P   D LSHLYTL ++  +N+F V +D +SVR G LE+ +DF  PK I DP+  KPADWVD + + DP D KPEGYDDIP  +PD EA +PEDW +E+DG WE PM+DNP+YKG W PKMI NP+YKG WEHP I NP+Y  DP ++    +  T +GFELWQV +GTMFDDI++TDSL+EA ++ +ETF+KK++ EKA ++
Sbjct:   21 FIKEQFNDEAWKTRWTVPSSWKSKSELGEWKHTAGAYFADENDQGIQTSENHRFYGLSAKMDKPFVSGDKELVIQYSVRHEQKLDCGGAYIKLLPGGDAFDADKFGGDTPYAVMFGPDICGSANKRTHVILNYP-AKNE--NLLINKEIPPEKDNLSHLYTL-VIRPDNTFEVFVDNKSVRSGKLEDEFDFLEPKQIKDPDAKKPADWVDIKKIPDPEDKKPEGYDDIPKEIPDPEATKPEDWSDEDDGQWEPPMIDNPEYKGEWKPKMIDNPEYKGKWEHPMIDNPDYKYDPDMYKVCKDGCTHIGFELWQVTAGTMFDDILVTDSLEEAQKFGEETFFKKKDAEKASYD 367          
BLAST of EWM25105.1 vs. NCBI_GenBank
Match: gi|1210529353|dbj|GAX11987.1| (calreticulin [Fistulifera solaris])

HSP 1 Score: 421.394 bits (1082), Expect = 2.137e-142
Identity = 206/351 (58.69%), Postives = 260/351 (74.07%), Query Frame = 0
Query:   21 YFTENFDDK-WESRWVVPSKWKAAEEIGEWAHTAGEWFGDAADKGIKTSQDARFYGLSAKLAKPFSNEGKDLVLQYVVKHEQRLDCGGAYIKLL--GPELDQASFGGDTPYQIMFGPDVCGS-TKRTHVIFNYPEAKGEDKNLLIKTDVPTRTDQLSHLYTLHIMAANNSFNVLIDGESVREGSLEESWDFRPPKTIPDPEQSKPADWVDEEMMADPADVKPEGYDDIPATLPDSEAVQPEDWDEEEDGVWEAPMVDNPDYKGPWSPKMIPNPDYKGAWEHPHIPNPEYSPDPKLHARATE-VTAVGFELWQVKSGTMFDDIILTDSLDEATEYAKETFWKKQEGEKAMFE 366
            +  E F+D+ W+ RW VPS WK+  E+GEW HTAG +F D  DKGI+TS++ RFYGLSAK+ KPF +  K+LV+QY V+HEQ+LDCGGAYIKLL  G   D   FGGDTPY +MFGPD+CGS  KRTHVI NYP AK E  NLLI  ++P   D LSHLYTL ++  +N+F V +D +SVR G LE+ +DF  PK I DP+  KPADWVD + + DP D KPEGYDDIP  +PD EA +PEDW +E+DG WE PM+ NP+YKG W PKMI NP+YKG WEHP I NP+Y  DP ++    +  T VGFELWQV +GTMFDDI++TDSL+EA ++ +ETF+KK++ EKA ++
Sbjct:   21 FIKEQFNDEAWKERWTVPSSWKSKSELGEWKHTAGAYFADENDKGIQTSENHRFYGLSAKMDKPFVSGDKELVIQYSVRHEQKLDCGGAYIKLLPGGDAFDADKFGGDTPYAVMFGPDICGSANKRTHVILNYP-AKNE--NLLINKEIPPEKDNLSHLYTL-VIRPDNTFEVFVDNKSVRSGKLEDEFDFLEPKQIKDPDAKKPADWVDTKKIPDPEDKKPEGYDDIPKEIPDPEATKPEDWSDEDDGQWEPPMIKNPEYKGEWKPKMIDNPEYKGKWEHPMIDNPDYKYDPDMYKVCKDGCTHVGFELWQVTAGTMFDDILVTDSLEEAQKFGEETFFKKKDAEKASYD 367          
BLAST of EWM25105.1 vs. NCBI_GenBank
Match: gi|831770900|ref|XP_012753140.1| (hypothetical protein SAMD00019534_072790 [Acytostelium subglobosum LB1] >gi|735853772|dbj|GAM24104.1| hypothetical protein SAMD00019534_072790 [Acytostelium subglobosum LB1])

HSP 1 Score: 417.157 bits (1071), Expect = 1.734e-140
Identity = 210/368 (57.07%), Postives = 271/368 (73.64%), Query Frame = 0
Query:   17 SATVYFTENFDDKWESRWVVPSKWKAAE-EIGEWAHTAGEWFGDAAD-KGIKTSQDARFYGLSAKLAKPFSNEGKDLVLQYVVKHEQRLDCGGAYIKLLGPELDQASFGGDTPYQIMFGPDVCGSTKRTHVIFNYPEAKGEDKNLLIKTDVPTRTDQLSHLYTLHIMAANNSFNVLIDGESVREGSLEESWDFRPPKTIPDPEQSKPADWVDEEMMADPADVKPEGYDDIPATLPDSEAVQPEDWDEEEDGVWEAPMVDNPDYKGPWSPKMIPNPDYKGAWEHPHIPNPEYSPDPKLHARATEVTAVGFELWQVKSGTMFDDIILTDSLDEATEYAKETFWKKQEGEKAMFEKAEEERVEKEKAEREE 382
            SA+V+F E F D W SRWV  SKWK  +   G++  TAG+W+GDA D KGI+T+ DARFY  SAK   PFSNEGKDLV+Q+ VKHEQ+LDCGGAYIKLL   +DQ +FGGD+ Y IMFGPD+CG++KRTH+IFNY   KG  KN L+K D+   +DQL+H YTL ++ ++NS+ VLID    + G+  E +DF PPK I DP +SKPADWVDE+ + DP DVKP  +D IPAT+ D EA +PEDW++E+DG WEAP + NP+YKG WS K IPNP+YKG W HP I NPEY  D  ++  +  + AVGFELWQVKSGT+FD+I++ D+++EA  ++   F K Q GEK MF+  E +R E+EKA+R+E
Sbjct:   17 SASVHFQETFGDDWTSRWVA-SKWKVEDGTAGKFIQTAGKWYGDAQDDKGIQTTPDARFYATSAKFT-PFSNEGKDLVVQFTVKHEQKLDCGGAYIKLLPATVDQENFGGDSDYYIMFGPDICGNSKRTHLIFNY---KG--KNHLVKRDIKVESDQLTHQYTL-VVKSDNSYVVLIDNVEAQSGTFVEDFDFLPPKQIKDPNESKPADWVDEKEINDPEDVKPADWDTIPATIVDPEAQKPEDWNDEDDGDWEAPTIANPEYKGAWSAKKIPNPEYKGPWVHPMIDNPEYKEDAAIYTYSN-IGAVGFELWQVKSGTIFDNILVADTVEEAKAFSAAHFEKNQAGEKKMFDDIEAKRAEEEKAKRDE 375          
BLAST of EWM25105.1 vs. NCBI_GenBank
Match: gi|397613461|gb|EJK62230.1| (hypothetical protein THAOC_17167 [Thalassiosira oceanica])

HSP 1 Score: 413.69 bits (1062), Expect = 2.732e-139
Identity = 229/377 (60.74%), Postives = 286/377 (75.86%), Query Frame = 0
Query:    7 LAVGLLTA----STSATVYFTENF-DDKWESRWVVPSKWKAAEEIGEWAHTAGEWFG-DAADKGIKTSQDARFYGLSAKLAKPF-SNEGKDLVLQYVVKHEQRLDCGGAYIKLL--GPELDQASFGGDTPYQIMFGPDVCGST-KRTHVIFNYPEAKGEDKNLLIKTDVPTRTDQLSHLYTLHIMAANNSFNVLIDGESVREGSLEESWDFRPPKTIPDPEQSKPADWVDEEMMADPADVKPEGYDDIPATLPDSEAVQPEDWDEEEDGVWEAPMVDNPDYKGPWSPKMIPNPDYKGAWEHPHIPNPEYSPDPKLHARAT-EVTAVGFELWQVKSGTMFDDIILTDSLDEATEYAKETFWKKQEGEKAMFEKAEEER 372
            LA  LL A    S  A VYF E F DD W  RW V S WK+  E+GEW HT GEW+G D +DKGI+TS+DARFYG+SA ++KPF S + KDLV+QY VKHEQ +DCGGAYIKLL  G + +   FGGDTPY +MFGPD+CGS+ KRTHVIF+Y +   +D+ LLIK +V T +DQLSHLYTL ++  +N+F V ID +SVR G L++ +DF P K I DP+QSKP DWVD   + DP DVKPEGYDDIPA + D +A +P+DWD+E+DG WEAPM+DNPDYKGPWSPKMI NPDYKGAW HP IPNPEY  D +++A      T VGFELWQVKSGT+FDDI +TDSL+EA ++A+E+F+KK+EGEK M++  + ++
Sbjct:    3 LATQLLAAYAVGSAVAEVYFKEQFNDDGWSERWTVSSDWKSKSELGEWKHTTGEWYGGDESDKGIQTSEDARFYGISAAMSKPFDSADKKDLVIQYTVKHEQNIDCGGAYIKLLPGGDKFESTKFGGDTPYGVMFGPDICGSSNKRTHVIFHYDK---KDEGLLIKKNVNTESDQLSHLYTL-VLRPDNTFEVFIDNKSVRSGKLDDEFDFLPEKEIKDPDQSKPEDWVDTREIPDPDDVKPEGYDDIPAEIADPDASKPDDWDDEDDGEWEAPMIDNPDYKGPWSPKMIKNPDYKGAWVHPKIPNPEYEYDEEMYAVCKGGCTHVGFELWQVKSGTVFDDIFITDSLEEAQQFAEESFFKKKEGEKKMYDDIQAKK 375          
BLAST of EWM25105.1 vs. NCBI_GenBank
Match: gi|1013937853|gb|KYQ91548.1| (calreticulin [Dictyostelium lacteum])

HSP 1 Score: 410.223 bits (1053), Expect = 8.347e-138
Identity = 208/375 (55.47%), Postives = 271/375 (72.27%), Query Frame = 0
Query:    1 MISRGLLAVGLLTASTSATVYFTENFDDKWESRWVVPSKWKAAE-EIGEWAHTAGEWFGDAADKGIKTSQDARFYGLSAKLAKPFSNEGKDLVLQYVVKHEQRLDCGGAYIKLLGPELDQASFGGDTPYQIMFGPDVCGSTKRTHVIFNYPEAKGEDKNLLIKTDVP-TRTDQLSHLYTLHIMAANNSFNVLIDGESVREGSLEESWDFRPPKTIPDPEQSKPADWVDEEMMADPADVKPEGYDDIPATLPDSEAVQPEDWDEEEDGVWEAPMVDNPDYKGPWSPKMIPNPDYKGAWEHPHIPNPEYSPDPKLHARATEVTAVGFELWQVKSGTMFDDIILTDSLDEATEYAKETFWKKQEGEKAMFEKAEEERV 373
            +++  LL V ++  + SAT++F ENFD+ WE+RWV  S WK  E + G++ HTAG+W+G  ++KGI+TSQDARFY +SAK  + FSNEGKDLVLQY VK E ++DCGG+YIKLL   LDQ +FGGD+ Y IMFGPD CG+ KR HVI NY   KG  KN LIK ++    TDQL+H YTL I+  +N++ VL+D   V+ GSL E WD  P K I DP+QSKP DWVD + + DP D+KP  YD IPAT+ D EAV+PEDW++E+DG WEAP + NPD+KG W  K I NP YKG W HP I NPEY  D  ++    +++ VGFELWQVKSG++FD II+TDS++EA E++++ F   QE EK MF++ EE+RV
Sbjct:    3 LLNLTLLIVAIVGVA-SATIHFQENFDNDWENRWVT-SDWKVKEGQSGKFVHTAGKWYGSESNKGIQTSQDARFYAVSAKFPE-FSNEGKDLVLQYTVKQENKVDCGGSYIKLLPAGLDQENFGGDSEYSIMFGPDQCGTQKRVHVILNY---KG--KNHLIKKEISKVETDQLTHQYTL-IIHPDNTYAVLVDNNEVQTGSLFEDWDILPAKQIKDPKQSKPVDWVDVKEIDDPEDIKPADYDSIPATVVDPEAVKPEDWNDEDDGEWEAPTIANPDFKGEWKAKKIANPAYKGEWVHPMIDNPEYKEDASVYVFP-KLSYVGFELWQVKSGSIFDHIIVTDSVEEAKEFSEKNFVANQESEKKMFDEQEEKRV 367          
BLAST of EWM25105.1 vs. NCBI_GenBank
Match: gi|2654398|gb|AAB87719.1| (calreticulin [Dictyostelium discoideum AX3])

HSP 1 Score: 407.142 bits (1045), Expect = 2.251e-136
Identity = 202/378 (53.44%), Postives = 276/378 (73.02%), Query Frame = 0
Query:    4 RGLLAVGLLTASTS---ATVYFTENFDDKWESRWVVPSKWKAAEEIGEWAHTAGEWFGDAADKGIKTSQDARFYGLSAKLAKPFSNEGKDLVLQYVVKHEQRLDCGGAYIKLLGPELDQASFGGDTPYQIMFGPDVCGSTKRTHVIFNYPEAKGEDKNLLIKTDV-PTRTDQLSHLYTLHIMAANNSFNVLIDGESVREGSLEESWDFRPPKTIPDPEQSKPADWVDEEMMADPADVKPEGYDDIPATLPDSEAVQPEDWDEEEDGVWEAPMVDNPDYKGPWSPKMIPNPDYKGAWEHPHIPNPEYSPDPKLHARATEVTAVGFELWQVKSGTMFDDIILTDSLDEATEYAKETFWKKQEGEKAMFEKAEEERVEKEK 377
            R LL +  L    +   +TV+F + FD+ WESRWVV    K   + G+  HTAG+WFGD   KGI+TS+DARFY +SAK    FSN+GKDLVLQY VK+EQ++DCGG+YIKLL  +LDQ++F G++ Y IMFGPDVCG++KR HVI NY   KG  KN LIK ++    TDQL+H YTL +++ +N++NVL+D + ++ G+L + W+  P K I DP+QSKP DWVD + + DP DVKP G+DDIPA++ D EAV+PEDW+EE+DG WEAP + NP+YKG W  K IPNP+YKG W HP I NPEY+ D +L+    ++ A+GFELWQVKSG++F+++I+TDS++EA +++++TF   QE EK MF+  E  + E+ K
Sbjct:    2 RLLLCLIFLVFVFNFALSTVHFKDTFDNDWESRWVVSDWHKEDGKSGKLVHTAGKWFGDENQKGIQTSEDARFYAVSAKFP-SFSNKGKDLVLQYTVKNEQKVDCGGSYIKLLPSKLDQSAFDGESEYSIMFGPDVCGASKRVHVILNY---KG--KNHLIKKEINKVETDQLTHQYTL-VISPDNTYNVLVDNKEIQAGNLADDWELLPSKQIKDPKQSKPVDWVDVKEIDDPEDVKPAGHDDIPASIVDPEAVKPEDWNEEDDGEWEAPTIANPEYKGEWKAKKIPNPEYKGEWVHPLIDNPEYAEDNELYL-FNDLGAIGFELWQVKSGSIFNNMIVTDSVEEAKDFSEKTFVANQEAEKKMFDDLEAAKAEERK 371          
The following BLAST results are available for this feature:
BLAST of EWM25105.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553196150|ref|XP_005856278.1|0.000e+0100.00calreticulin, partial [Nannochloropsis gaditana CC... [more]
gi|585106743|gb|EWM25105.1|0.000e+0100.00calreticulin precursor [Nannochloropsis gaditana][more]
gi|224003875|ref|XP_002291609.1|2.395e-14659.36calreticulin-like protein, partial [Thalassiosira ... [more]
gi|298711697|emb|CBJ32747.1|1.323e-14563.51Calreticulin [Ectocarpus siliculosus][more]
gi|1210527110|dbj|GAX14083.1|1.459e-14258.40calreticulin [Fistulifera solaris][more]
gi|1210529353|dbj|GAX11987.1|2.137e-14258.69calreticulin [Fistulifera solaris][more]
gi|831770900|ref|XP_012753140.1|1.734e-14057.07hypothetical protein SAMD00019534_072790 [Acytoste... [more]
gi|397613461|gb|EJK62230.1|2.732e-13960.74hypothetical protein THAOC_17167 [Thalassiosira oc... [more]
gi|1013937853|gb|KYQ91548.1|8.347e-13855.47calreticulin [Dictyostelium lacteum][more]
gi|2654398|gb|AAB87719.1|2.251e-13653.44calreticulin [Dictyostelium discoideum AX3][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5560rna5560Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications