EWM25089.1, cds5539 (CDS) Nannochloropsis gaditana

Overview
NameEWM25089.1
Unique Namecds5539
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:270656..272569 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25089.1
Productinactive ubiquitin carboxyl-terminal hydrolase 54
Orig transcript idgnl|cribi|Naga_100016g55.2898.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:270656..272569 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0036459thiol-dependent ubiquitinyl hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0009056catabolic process
GO:0006511ubiquitin-dependent protein catabolic process
Vocabulary: INTERPRO
TermDefinition
IPR028889USP_dom
IPR001394Peptidase_C19_UCH
Homology
BLAST of EWM25089.1 vs. NCBI_GenBank
Match: gi|553196200|ref|XP_005856289.1| (ubiquitin specific peptidase 54, partial [Nannochloropsis gaditana CCMP526] >gi|422292767|gb|EKU20069.1| ubiquitin specific peptidase 54, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1329.31 bits (3439), Expect = 0.000e+0
Identity = 637/637 (100.00%), Postives = 637/637 (100.00%), Query Frame = 0
Query:    1 MGDNHLTSTQEQYGPPHQGRQHHYSRYAEQGCSLYRQGFFDGSSPHPSRLRHYQGGGPPSAVHPAYSLPVHHAIDVQQRPLPFAFPRVVRNSPCRGNPVFTAAPPYSAISCEEGRLPGGPRALLRGATEAGWRRGRVSRGRGDEEGGRGHARGRATYSTAGRNARCQGLPPSGEGETSSSNKQDGCQHSYPVPISGVGAQAEEDTEIARQLVVERVEGSHEAGIATGAHLSHPPKQESRVKLPSDRIKSPSNRSQAGSRVLVGGGLANRMGQNHCYLNVVVQSLWSIRAFRNRVCRDTDTSMLVKSNETAHMCKLHEALRAVMEGLSDQEANIASHERGEDTTIPPPVVSVDKLRQVLSEMVRQKSNPTPACGSEIYVHDGKFRAGHMDDAVEAFEEILRLLGTGGEEGRLVVRDSFCLHLRELMFCPTCGSSSPSPARDYDTNVFYVPVRSLIEEAARRASSKSNSISISESVGLDFGSLLQDAGSGDLYRCRNTEACPIARRGEKRAGHRYLVRGPPSVFSLGLVWDSLKADPRDTQALIDLLSSTICLKHFKLPVEHQGDDDVEQQGEMIGVLRGFFAFHPQKHHYVSFLLYDGTGWVCVDDGRAYALGPHLSDALKECTEQQYQPSLLFYEAN 637
            MGDNHLTSTQEQYGPPHQGRQHHYSRYAEQGCSLYRQGFFDGSSPHPSRLRHYQGGGPPSAVHPAYSLPVHHAIDVQQRPLPFAFPRVVRNSPCRGNPVFTAAPPYSAISCEEGRLPGGPRALLRGATEAGWRRGRVSRGRGDEEGGRGHARGRATYSTAGRNARCQGLPPSGEGETSSSNKQDGCQHSYPVPISGVGAQAEEDTEIARQLVVERVEGSHEAGIATGAHLSHPPKQESRVKLPSDRIKSPSNRSQAGSRVLVGGGLANRMGQNHCYLNVVVQSLWSIRAFRNRVCRDTDTSMLVKSNETAHMCKLHEALRAVMEGLSDQEANIASHERGEDTTIPPPVVSVDKLRQVLSEMVRQKSNPTPACGSEIYVHDGKFRAGHMDDAVEAFEEILRLLGTGGEEGRLVVRDSFCLHLRELMFCPTCGSSSPSPARDYDTNVFYVPVRSLIEEAARRASSKSNSISISESVGLDFGSLLQDAGSGDLYRCRNTEACPIARRGEKRAGHRYLVRGPPSVFSLGLVWDSLKADPRDTQALIDLLSSTICLKHFKLPVEHQGDDDVEQQGEMIGVLRGFFAFHPQKHHYVSFLLYDGTGWVCVDDGRAYALGPHLSDALKECTEQQYQPSLLFYEAN
Sbjct: 1166 MGDNHLTSTQEQYGPPHQGRQHHYSRYAEQGCSLYRQGFFDGSSPHPSRLRHYQGGGPPSAVHPAYSLPVHHAIDVQQRPLPFAFPRVVRNSPCRGNPVFTAAPPYSAISCEEGRLPGGPRALLRGATEAGWRRGRVSRGRGDEEGGRGHARGRATYSTAGRNARCQGLPPSGEGETSSSNKQDGCQHSYPVPISGVGAQAEEDTEIARQLVVERVEGSHEAGIATGAHLSHPPKQESRVKLPSDRIKSPSNRSQAGSRVLVGGGLANRMGQNHCYLNVVVQSLWSIRAFRNRVCRDTDTSMLVKSNETAHMCKLHEALRAVMEGLSDQEANIASHERGEDTTIPPPVVSVDKLRQVLSEMVRQKSNPTPACGSEIYVHDGKFRAGHMDDAVEAFEEILRLLGTGGEEGRLVVRDSFCLHLRELMFCPTCGSSSPSPARDYDTNVFYVPVRSLIEEAARRASSKSNSISISESVGLDFGSLLQDAGSGDLYRCRNTEACPIARRGEKRAGHRYLVRGPPSVFSLGLVWDSLKADPRDTQALIDLLSSTICLKHFKLPVEHQGDDDVEQQGEMIGVLRGFFAFHPQKHHYVSFLLYDGTGWVCVDDGRAYALGPHLSDALKECTEQQYQPSLLFYEAN 1802          
BLAST of EWM25089.1 vs. NCBI_GenBank
Match: gi|585106727|gb|EWM25089.1| (inactive ubiquitin carboxyl-terminal hydrolase 54 [Nannochloropsis gaditana])

HSP 1 Score: 1312.75 bits (3396), Expect = 0.000e+0
Identity = 637/637 (100.00%), Postives = 637/637 (100.00%), Query Frame = 0
Query:    1 MGDNHLTSTQEQYGPPHQGRQHHYSRYAEQGCSLYRQGFFDGSSPHPSRLRHYQGGGPPSAVHPAYSLPVHHAIDVQQRPLPFAFPRVVRNSPCRGNPVFTAAPPYSAISCEEGRLPGGPRALLRGATEAGWRRGRVSRGRGDEEGGRGHARGRATYSTAGRNARCQGLPPSGEGETSSSNKQDGCQHSYPVPISGVGAQAEEDTEIARQLVVERVEGSHEAGIATGAHLSHPPKQESRVKLPSDRIKSPSNRSQAGSRVLVGGGLANRMGQNHCYLNVVVQSLWSIRAFRNRVCRDTDTSMLVKSNETAHMCKLHEALRAVMEGLSDQEANIASHERGEDTTIPPPVVSVDKLRQVLSEMVRQKSNPTPACGSEIYVHDGKFRAGHMDDAVEAFEEILRLLGTGGEEGRLVVRDSFCLHLRELMFCPTCGSSSPSPARDYDTNVFYVPVRSLIEEAARRASSKSNSISISESVGLDFGSLLQDAGSGDLYRCRNTEACPIARRGEKRAGHRYLVRGPPSVFSLGLVWDSLKADPRDTQALIDLLSSTICLKHFKLPVEHQGDDDVEQQGEMIGVLRGFFAFHPQKHHYVSFLLYDGTGWVCVDDGRAYALGPHLSDALKECTEQQYQPSLLFYEAN 637
            MGDNHLTSTQEQYGPPHQGRQHHYSRYAEQGCSLYRQGFFDGSSPHPSRLRHYQGGGPPSAVHPAYSLPVHHAIDVQQRPLPFAFPRVVRNSPCRGNPVFTAAPPYSAISCEEGRLPGGPRALLRGATEAGWRRGRVSRGRGDEEGGRGHARGRATYSTAGRNARCQGLPPSGEGETSSSNKQDGCQHSYPVPISGVGAQAEEDTEIARQLVVERVEGSHEAGIATGAHLSHPPKQESRVKLPSDRIKSPSNRSQAGSRVLVGGGLANRMGQNHCYLNVVVQSLWSIRAFRNRVCRDTDTSMLVKSNETAHMCKLHEALRAVMEGLSDQEANIASHERGEDTTIPPPVVSVDKLRQVLSEMVRQKSNPTPACGSEIYVHDGKFRAGHMDDAVEAFEEILRLLGTGGEEGRLVVRDSFCLHLRELMFCPTCGSSSPSPARDYDTNVFYVPVRSLIEEAARRASSKSNSISISESVGLDFGSLLQDAGSGDLYRCRNTEACPIARRGEKRAGHRYLVRGPPSVFSLGLVWDSLKADPRDTQALIDLLSSTICLKHFKLPVEHQGDDDVEQQGEMIGVLRGFFAFHPQKHHYVSFLLYDGTGWVCVDDGRAYALGPHLSDALKECTEQQYQPSLLFYEAN
Sbjct:    1 MGDNHLTSTQEQYGPPHQGRQHHYSRYAEQGCSLYRQGFFDGSSPHPSRLRHYQGGGPPSAVHPAYSLPVHHAIDVQQRPLPFAFPRVVRNSPCRGNPVFTAAPPYSAISCEEGRLPGGPRALLRGATEAGWRRGRVSRGRGDEEGGRGHARGRATYSTAGRNARCQGLPPSGEGETSSSNKQDGCQHSYPVPISGVGAQAEEDTEIARQLVVERVEGSHEAGIATGAHLSHPPKQESRVKLPSDRIKSPSNRSQAGSRVLVGGGLANRMGQNHCYLNVVVQSLWSIRAFRNRVCRDTDTSMLVKSNETAHMCKLHEALRAVMEGLSDQEANIASHERGEDTTIPPPVVSVDKLRQVLSEMVRQKSNPTPACGSEIYVHDGKFRAGHMDDAVEAFEEILRLLGTGGEEGRLVVRDSFCLHLRELMFCPTCGSSSPSPARDYDTNVFYVPVRSLIEEAARRASSKSNSISISESVGLDFGSLLQDAGSGDLYRCRNTEACPIARRGEKRAGHRYLVRGPPSVFSLGLVWDSLKADPRDTQALIDLLSSTICLKHFKLPVEHQGDDDVEQQGEMIGVLRGFFAFHPQKHHYVSFLLYDGTGWVCVDDGRAYALGPHLSDALKECTEQQYQPSLLFYEAN 637          
BLAST of EWM25089.1 vs. NCBI_GenBank
Match: gi|299470743|emb|CBN79789.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 159.073 bits (401), Expect = 6.265e-37
Identity = 108/292 (36.99%), Postives = 141/292 (48.29%), Query Frame = 0
Query:  349 VSVDKLRQVLSEMVRQKSNPTPACGSEIYVHDGKFRAGHMDDAVEAFEEILRLLGTGGEEGRLVVRDSFCLHLRELMFCPTCGSSSPSPARDYDTNVFYVPVRSLIEEAARRASSKSNSISISESVGLDFGSLLQDAGSGDLYRCRNTEACPIARRGEKRAGHRYLVRGPPSVFSLGLVWDSLKADPRDTQALIDLLSSTICLK-HFKLPVEHQGDDDVEQQGEM---IGVLRGFFAFHPQKHHYVSFLLY-DGTGWVCVDDGRAYALGPHLSDALKECTEQQYQPSLLFYE 635
             SV+ LR  L+E+                    +F AG MDDA EA E IL  L  G      V+R  F + +RE + CP CG+SSP     Y+ NVFY  V +L     R A  K+         G  F   L++A  GDL  CRN   C ++RR E+    R++   PPSVFSLGLVW++    P     L+ LLS  + L   F    EH     V   GE+      LRGFF F  QKHHYV+F+   D   W+ +DD +A  +GP  +  L  C E +  PSL F+E
Sbjct: 1663 ASVEALRTALAEL-----------------SGARFGAGKMDDAAEAMETILGCLVKGSSPA--VIRQVFSMRIREALVCPRCGTSSPEKPATYEANVFYAHVSAL-----REAREKTP--------GCPFDVALREASHGDLVTCRNA-GCSLSRRKERLPSQRFITGVPPSVFSLGLVWNNW--GPGLVADLLGLLSPVVDLDVVFSRGREH----GVAGAGEVSAGKAQLRGFFCFQVQKHHYVAFVYNRDRQEWLLLDDDQAVPIGPDFAGVLGRCEEDKLHPSLFFFE 1915          
BLAST of EWM25089.1 vs. NCBI_GenBank
Match: gi|673033860|ref|XP_008870891.1| (hypothetical protein H310_07299 [Aphanomyces invadans] >gi|574473753|gb|ETW00756.1| hypothetical protein H310_07299 [Aphanomyces invadans])

HSP 1 Score: 116.316 bits (290), Expect = 2.938e-23
Identity = 107/384 (27.86%), Postives = 167/384 (43.49%), Query Frame = 0
Query:  261 LVGGGLANRMGQNHCYLNVVVQSLWSIRAFRNRVCRDTDTSMLVKSNETAHMCKLHEALRAVMEGLSDQEANIASHERGEDTTIPPPVVSVDKLRQVLSEMVRQKSNPTPACGSEIYVHDGKFRAGHMDDAVEAFEEILRLL------GTGGEEGRLVVRDSFCLHLRELMFCPTCGSSSPSPARDYDTNVFYVPVRSLIEEAARRASSKSNSISISESVGLDFGSLLQD--AGSGDLYRCRNTEACPIARRGEKRAGHRYLVRGPPSVFSLGLVWDSLKADPRDTQALIDLLSSTICLKHFKLPVEHQGDDDVEQQGEMIGVLRGFFAFHPQKHHYVSFLLYDGTG-WVCVDDGRAYALGPHLSDALKECTEQQYQPSLLFYE 635
            L   GL N  G+N+C+LNVVVQ+L+ +  F++R           ++    H C      R V   L+   A +AS   GE        VS D LR+VLS +    ++P PA        + +++AG MDDA EA E ILR L       +       +    F L + E   CP C +S  +P   YD  + +V   ++ E AA + S  SN     ++V   F  LL    A +G   +C          R +K    R  ++  P VF++GL W +  A+    ++++  +  ++ L      +   G      +G+    L   + F    HHY++F+    T  W+  +D     +G   SD    C E  YQP +LFY+
Sbjct:  532 LTEKGLRNDSGENNCFLNVVVQALFHLETFQSR---------WTETTAVPHECAGDG--RCVYCSLASVFALLASDADGESDKT--GGVSSDSLRKVLSAI---STSPLPAA-------EERYKAGSMDDAAEAHETILRSLHEALASSSVASPCNCLAHSVFGLWVGEEAVCPLCQTSMATPP--YDAMMLHVATEAIKESAANK-SKVSN-----KAVVKRFDDLLATVWAAAGSSKKCTTC-------RHDKVYESRLQLKQVPRVFTVGLTWKNNSANMATLKSIVTAMECSVRLGRVFPNMVADGQLGGPDEGQ--ATLLAMYCFF--GHHYMAFIYKAATQEWLSFNDTVVRRVGTRWSDVQAACLENHYQPYVLFYD 873          
BLAST of EWM25089.1 vs. NCBI_GenBank
Match: gi|939659309|ref|XP_014277705.1| (PREDICTED: uncharacterized protein LOC106681750 isoform X1 [Halyomorpha halys])

HSP 1 Score: 113.62 bits (283), Expect = 2.840e-22
Identity = 109/390 (27.95%), Postives = 162/390 (41.54%), Query Frame = 0
Query:  260 VLVGGGLANRMGQNHCYLNVVVQSLWSIRAFRNRVCRDTDTSMLVKSNETAHMCKLHEALRAVMEGLSDQEANIASHERGEDTTIPPPVVSVDKLRQVLSEMVRQKSNPTPACGSEIYVHDGKFRAGHMDDAVEAFEEI-LRL---LGTGGEE-----GRLVVRDSFCLHLRELMFCPTCGSSS-PSPARDYDTNVFYVPVRSLIEEAARRASSKSNSISISESVGLDFGSLLQDAGS-GDLYRCRNTEACPIARRGEKRAGHRYLVRGPPSVFSLGLVWDSLKADPRDTQALIDLLSSTICLKH-FKLPVEHQGDDDVEQQGEMIGVLRGFFAFHPQKHHYVSFLLYDGTG-WVCVDDGRAYALGPHLSDALKECTEQQYQPSLLFYEA 636
             +   GL NR GQN+C+LN  VQ LW +  FR R  R+           + H C L   +   ++ L  Q     SHE    + +PP     D LR+ L+E                +    +F+ G MDDA E FE I LR+   L  G  E     G  +    F + L E   C  CG++S P P   +   V YV   +LI +A +  +   + +         FG LL+ AG  GD+  C    AC     G K    R L    P + S+G+VWDS +       +L+  L +T+ L   F  P       ++    +++GV+  +        HY +F  +     W+  DD     +GP     + +C   +YQP LL + A
Sbjct:    7 AIFSKGLLNRPGQNNCFLNSAVQVLWHLDIFR-RSFREL----------SGHTCMLDSCIFCALKELFSQLQ--FSHE----SALPP-----DALRRALAES---------------FFDQQRFQLGFMDDAAECFENILLRIHFHLACGEAEDLCSAGHCIPHVKFAMTLVEQSVCGACGATSEPLP---FTQMVHYVSASALISQAKQTPNPAHSDL---------FGQLLKKAGGMGDIRDC--PSAC-----GAKIQIRRTLTNH-PEIVSVGIVWDSERPSLEHVMSLLGTLRTTLRLTEVFHTPTP---SPNMNTPHQLVGVVTYY------GKHYSTFFFHTKLRVWIYFDDANVREVGPKWEQVVDKCRRGRYQPLLLLFAA 330          
BLAST of EWM25089.1 vs. NCBI_GenBank
Match: gi|669136574|ref|XP_008603855.1| (hypothetical protein SDRG_00167 [Saprolegnia diclina VS20] >gi|530744190|gb|EQC42432.1| hypothetical protein SDRG_00167 [Saprolegnia diclina VS20])

HSP 1 Score: 109.383 bits (272), Expect = 3.756e-21
Identity = 109/394 (27.66%), Postives = 163/394 (41.37%), Query Frame = 0
Query:  265 GLANRMGQNHCYLNVVVQSLWSIRAFRNRVCRDTDTSMLVKSNETAHMCK-----LHEALRAVMEGLSDQEANIASHERGEDTTIPPPVVSVDKLRQVLSEM----VRQKSNPTPACGSEIYVHDGKFRAGHMDDAVEAFEEILRLL------GTGGEEGRLVVRDSFCLHLRELMFCPTCGSSSPSPARDYDTNVFYVPVRSLIEEAARRASSKSNSISISESVGLDFGSLLQDAGSGDLYRCRNTEACPIARRGEKRAGHRYLVRGPPSVFSLGLVWDSLKADPRDTQALIDLLSSTICLKHF-------KLPVEHQGDDDVEQQGEMIGVLRGFFAFHPQKHHYVSFLLYDGTG-WVCVDDGRAYALGPHLSDALKECTEQQYQPSLLFYE 635
            GL N  G+N+C+LNVVVQSL+ ++ FRN              + T H+C      ++ AL AV + LS           G++ T      S D LR VLS +        S P P  G        +F  G MDDA EA + +L  L       +  ++   V+   F L + E   CP C +     A  YDT V       L +   R+ +   + + ++  V +  G   + A S    RCRNT+  P + +          ++  P VF++GL W + +        ++  ++ TI L           L + H G +D          L G F +    HHY++FL    T  W+  DD     +G   SD  K C E   QP +LFY+
Sbjct:  428 GLRNDTGENNCFLNVVVQSLFHLQTFRNAF-----------RSITRHVCPGDGRCVYCALSAVFDMLS----------PGDNQT----ACSSDALRSVLSTLSASSAANVSLPPPGDGPN------RFSLGSMDDAAEAHDAVLWQLHEALKTSSKTQDCTCVIHSVFGLLVGEEAHCPKCHTK--MTAATYDTMVMAASTAQLHDHIVRKKARTFDKL-LAHVVAIG-GGTRKCANS----RCRNTDLLPSSLK----------LKALPQVFTVGLSWPNAQPSSGYLGHIVSSIAPTIDLTRVFPNLIADGLALPHGGGNDAH--------LMGVFCYF--GHHYLTFLFQPSTNEWLSFDDTVVKRVGASWSDVQKVCLENHLQPMVLFYD 762          
BLAST of EWM25089.1 vs. NCBI_GenBank
Match: gi|939309126|ref|XP_014269267.1| (PREDICTED: inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X1 [Maylandia zebra] >gi|939309128|ref|XP_014269268.1| PREDICTED: inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X1 [Maylandia zebra] >gi|939309130|ref|XP_014269269.1| PREDICTED: inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X1 [Maylandia zebra] >gi|939309132|ref|XP_014269270.1| PREDICTED: inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X1 [Maylandia zebra])

HSP 1 Score: 107.457 bits (267), Expect = 2.576e-20
Identity = 105/380 (27.63%), Postives = 163/380 (42.89%), Query Frame = 0
Query:  265 GLANRMGQNHCYLNVVVQSLWSIRAFRNRVCRDTDTSMLVKSNETAHMCKLHEALRAVMEGLSDQEANIASHERGEDTTIPPPVVSVDKLRQVLSEMVRQKSNPTPACGSEIYVHDGKFRAGHMDDAVEAFEEIL-RLLGTGGEEGR--------LVVRDSFCLHLRELMFCPTCGSSS-PSPARDYDTNVFYVPVRSLIEEAARRASSKSNSISISESVGLDFGSLLQDAGSGDLYRCRNTEACPIARRGEKRAGHRYLVRGPPSVFSLGLVWDSLKADPRDTQALIDLLSSTICLKHFKLPVEHQGDDDVEQQGEMIGVLRGFFAFHPQKHHYVSFLLYDGTGWVCVDDGRAYALGPHLSDALKECTEQQYQPSLLFY 634
            GL+N  GQN C+LN  +Q LW +  FR R  R            T H C     +   ++ +       A  +   D  +P      D LR  L++  + K                +F+ G MDDA E FE IL R+     +E +         +    F + L E   C +CG+SS P P   +   V Y+   SL  +A +   S+  +     + G+ FG LL++A  GDL   RN   CP ++ G++    R L+   P + ++GLVWDS  +D    + +I  L +  CL+   L   ++  ++  +Q E+   L G   ++  KH+   F       W+  DD     +GP   D +  C +  YQP LL Y
Sbjct:   44 GLSNEPGQNSCFLNSALQVLWHLDIFR-RSFRQL----------TTHKCMEDSCIFCALKSI------FAQFQYSSDKVLP-----SDALRSALAKTFQDKQ---------------RFQLGIMDDAAECFENILMRIHFHIADETKEDICTARHCIPHQKFAMMLYEQCVCSSCGASSDPLP---FIQMVHYISTTSLCNQAVKMLESREKA-----TPGM-FGELLRNASMGDL---RN---CP-SQCGQQLRMARVLLNS-PEIITIGLVWDSDHSD--LAEDVIHTLGT--CLRLGDL--FYRVTEEKARQSEL--YLVGMVCYY-GKHYSTFFFQTKIRRWMYFDDAHVKEIGPKWIDVVSRCIKGHYQPLLLLY 360          
BLAST of EWM25089.1 vs. NCBI_GenBank
Match: gi|939309134|ref|XP_014269271.1| (PREDICTED: inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X2 [Maylandia zebra])

HSP 1 Score: 107.457 bits (267), Expect = 2.606e-20
Identity = 105/380 (27.63%), Postives = 163/380 (42.89%), Query Frame = 0
Query:  265 GLANRMGQNHCYLNVVVQSLWSIRAFRNRVCRDTDTSMLVKSNETAHMCKLHEALRAVMEGLSDQEANIASHERGEDTTIPPPVVSVDKLRQVLSEMVRQKSNPTPACGSEIYVHDGKFRAGHMDDAVEAFEEIL-RLLGTGGEEGR--------LVVRDSFCLHLRELMFCPTCGSSS-PSPARDYDTNVFYVPVRSLIEEAARRASSKSNSISISESVGLDFGSLLQDAGSGDLYRCRNTEACPIARRGEKRAGHRYLVRGPPSVFSLGLVWDSLKADPRDTQALIDLLSSTICLKHFKLPVEHQGDDDVEQQGEMIGVLRGFFAFHPQKHHYVSFLLYDGTGWVCVDDGRAYALGPHLSDALKECTEQQYQPSLLFY 634
            GL+N  GQN C+LN  +Q LW +  FR R  R            T H C     +   ++ +       A  +   D  +P      D LR  L++  + K                +F+ G MDDA E FE IL R+     +E +         +    F + L E   C +CG+SS P P   +   V Y+   SL  +A +   S+  +     + G+ FG LL++A  GDL   RN   CP ++ G++    R L+   P + ++GLVWDS  +D    + +I  L +  CL+   L   ++  ++  +Q E+   L G   ++  KH+   F       W+  DD     +GP   D +  C +  YQP LL Y
Sbjct:   44 GLSNEPGQNSCFLNSALQVLWHLDIFR-RSFRQL----------TTHKCMEDSCIFCALKSI------FAQFQYSSDKVLP-----SDALRSALAKTFQDKQ---------------RFQLGIMDDAAECFENILMRIHFHIADETKEDICTARHCIPHQKFAMMLYEQCVCSSCGASSDPLP---FIQMVHYISTTSLCNQAVKMLESREKA-----TPGM-FGELLRNASMGDL---RN---CP-SQCGQQLRMARVLLNS-PEIITIGLVWDSDHSD--LAEDVIHTLGT--CLRLGDL--FYRVTEEKARQSEL--YLVGMVCYY-GKHYSTFFFQTKIRRWMYFDDAHVKEIGPKWIDVVSRCIKGHYQPLLLLY 360          
BLAST of EWM25089.1 vs. NCBI_GenBank
Match: gi|939309136|ref|XP_014269272.1| (PREDICTED: inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X3 [Maylandia zebra])

HSP 1 Score: 107.071 bits (266), Expect = 2.981e-20
Identity = 103/380 (27.11%), Postives = 161/380 (42.37%), Query Frame = 0
Query:  265 GLANRMGQNHCYLNVVVQSLWSIRAFRNRVCRDTDTSMLVKSNETAHMCKLHEALRAVMEGLSDQEANIASHERGEDTTIPPPVVSVDKLRQVLSEMVRQKSNPTPACGSEIYVHDGKFRAGHMDDAVEAFEEIL-RLLGTGGEEGR--------LVVRDSFCLHLRELMFCPTCGSSS-PSPARDYDTNVFYVPVRSLIEEAARRASSKSNSISISESVGLDFGSLLQDAGSGDLYRCRNTEACPIARRGEKRAGHRYLVRGPPSVFSLGLVWDSLKADPRDTQALIDLLSSTICLKHFKLPVEHQGDDDVEQQGEMIGVLRGFFAFHPQKHHYVSFLLYDGTGWVCVDDGRAYALGPHLSDALKECTEQQYQPSLLFY 634
            GL+N  GQN C+LN  +Q LW +  FR                 T H C     +   ++ +       A  +   D  +P      D LR  L++  + K                +F+ G MDDA E FE IL R+     +E +         +    F + L E   C +CG+SS P P   +   V Y+   SL  +A +   S+  +     + G+ FG LL++A  GDL   RN   CP ++ G++    R L+   P + ++GLVWDS  +D    + +I  L +  CL+   L   ++  ++  +Q E+   L G   ++  KH+   F       W+  DD     +GP   D +  C +  YQP LL Y
Sbjct:   44 GLSNEPGQNSCFLNSALQVLWHLDIFRRSF-----------RQLTTHKCMEDSCIFCALKSI------FAQFQYSSDKVLP-----SDALRSALAKTFQDKQ---------------RFQLGIMDDAAECFENILMRIHFHIADETKEDICTARHCIPHQKFAMMLYEQCVCSSCGASSDPLP---FIQMVHYISTTSLCNQAVKMLESREKA-----TPGM-FGELLRNASMGDL---RN---CP-SQCGQQLRMARVLLNS-PEIITIGLVWDSDHSD--LAEDVIHTLGT--CLRLGDL--FYRVTEEKARQSEL--YLVGMVCYY-GKHYSTFFFQTKIRRWMYFDDAHVKEIGPKWIDVVSRCIKGHYQPLLLLY 360          
BLAST of EWM25089.1 vs. NCBI_GenBank
Match: gi|923843163|ref|XP_013768913.1| (PREDICTED: inactive ubiquitin carboxyl-terminal hydrolase 54-like isoform X1 [Pundamilia nyererei] >gi|923843167|ref|XP_013768914.1| PREDICTED: inactive ubiquitin carboxyl-terminal hydrolase 54-like isoform X1 [Pundamilia nyererei] >gi|923843170|ref|XP_013768915.1| PREDICTED: inactive ubiquitin carboxyl-terminal hydrolase 54-like isoform X1 [Pundamilia nyererei] >gi|923843175|ref|XP_013768916.1| PREDICTED: inactive ubiquitin carboxyl-terminal hydrolase 54-like isoform X1 [Pundamilia nyererei] >gi|923843179|ref|XP_013768917.1| PREDICTED: inactive ubiquitin carboxyl-terminal hydrolase 54-like isoform X1 [Pundamilia nyererei] >gi|923843183|ref|XP_013768918.1| PREDICTED: inactive ubiquitin carboxyl-terminal hydrolase 54-like isoform X1 [Pundamilia nyererei])

HSP 1 Score: 106.686 bits (265), Expect = 3.157e-20
Identity = 106/380 (27.89%), Postives = 163/380 (42.89%), Query Frame = 0
Query:  265 GLANRMGQNHCYLNVVVQSLWSIRAFRNRVCRDTDTSMLVKSNETAHMCKLHEALRAVMEGLSDQEANIASHERGEDTTIPPPVVSVDKLRQVLSEMVRQKSNPTPACGSEIYVHDGKFRAGHMDDAVEAFEEIL-RLLGTGGEEGR--------LVVRDSFCLHLRELMFCPTCGSSS-PSPARDYDTNVFYVPVRSLIEEAARRASSKSNSISISESVGLDFGSLLQDAGSGDLYRCRNTEACPIARRGEKRAGHRYLVRGPPSVFSLGLVWDSLKADPRDTQALIDLLSSTICLKHFKLPVEHQGDDDVEQQGEMIGVLRGFFAFHPQKHHYVSFLLYDGTGWVCVDDGRAYALGPHLSDALKECTEQQYQPSLLFY 634
            GL+N  GQN C+LN  +Q LW +  FR R  R            T H C     +   ++ +       A  +   D  +P      D LR  L++  + K                +F+ G MDDA E FE IL R+     +E +         +    F + L E   C +CG+SS P P   +   V Y+   SL  +A +   S+  +     + G+ FG LLQ+A  GDL   RN   CP ++ G++    R L+   P + ++GLVWDS  +D    + +I  L +  CL+   L   ++  ++  +Q E+   L G   ++  KH+   F       W+  DD     +GP   D +  C +  YQP LL Y
Sbjct:   44 GLSNEPGQNSCFLNSALQVLWHLDIFR-RSFRQL----------TTHKCMEDSCIFCALKSI------FAQFQYSSDKVLPS-----DALRSALAKTFQDKQ---------------RFQLGIMDDAAECFENILMRIHFHIADETKEDICTARHCIPHQKFAMMLYEQCVCSSCGASSDPLP---FIQMVHYISTTSLCNQAVKMLESREKA-----TPGM-FGELLQNASMGDL---RN---CP-SQCGQQLRMARVLLNS-PEIITIGLVWDSDHSDL--AEDVIHTLGT--CLRLGDL--FYRVTEEKARQSEL--YLVGMVCYY-GKHYSTFFFQTKIRRWMYFDDAHVKEIGPKWIDVVSRCIKGHYQPLLLLY 360          
The following BLAST results are available for this feature:
BLAST of EWM25089.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553196200|ref|XP_005856289.1|0.000e+0100.00ubiquitin specific peptidase 54, partial [Nannochl... [more]
gi|585106727|gb|EWM25089.1|0.000e+0100.00inactive ubiquitin carboxyl-terminal hydrolase 54 ... [more]
gi|299470743|emb|CBN79789.1|6.265e-3736.99conserved unknown protein [Ectocarpus siliculosus][more]
gi|673033860|ref|XP_008870891.1|2.938e-2327.86hypothetical protein H310_07299 [Aphanomyces invad... [more]
gi|939659309|ref|XP_014277705.1|2.840e-2227.95PREDICTED: uncharacterized protein LOC106681750 is... [more]
gi|669136574|ref|XP_008603855.1|3.756e-2127.66hypothetical protein SDRG_00167 [Saprolegnia dicli... [more]
gi|939309126|ref|XP_014269267.1|2.576e-2027.63PREDICTED: inactive ubiquitin carboxyl-terminal hy... [more]
gi|939309134|ref|XP_014269271.1|2.606e-2027.63PREDICTED: inactive ubiquitin carboxyl-terminal hy... [more]
gi|939309136|ref|XP_014269272.1|2.981e-2027.11PREDICTED: inactive ubiquitin carboxyl-terminal hy... [more]
gi|923843163|ref|XP_013768913.1|3.157e-2027.89PREDICTED: inactive ubiquitin carboxyl-terminal hy... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5553rna5553Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications