EWM25114.1, cds5538 (CDS) Nannochloropsis gaditana

Overview
NameEWM25114.1
Unique Namecds5538
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:267582..268733 +
Alignment locationCM002466.1:268852..269679 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25114.1
ProductPeroxisome membrane anchor protein Pex14p
Orig transcript idgnl|cribi|Naga_100016g57.2923.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:267582..268733 +
CM002466.1supercontigCM002466.1:268852..269679 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR006785Pex14_N
Homology
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BLAST of EWM25114.1 vs. NCBI_GenBank
Match: gi|585106752|gb|EWM25114.1| (Peroxisome membrane anchor protein Pex14p [Nannochloropsis gaditana])

HSP 1 Score: 1373.99 bits (3555), Expect = 0.000e+0
Identity = 659/659 (100.00%), Postives = 659/659 (100.00%), Query Frame = 0 
Query:    1 MNPGRGVNDASTYNKARLCNGSEGVTALEFLTVPNVAKTPISSRIAFLKSKGFTETEISVALRLAGEVMCSGHNTSSPATRQPACVDRSIVDVKSEAWGPVARGHAWNSSFSSASARRTFQSHFGDSATTRVGFSDRQAHAHHQNGIFSGSAFPPSQAPRGGLRGCGQDVGEVSDMMAAINVAKSSMQGGAFFRAKSRGASHGLSEHYMPPRHAQGRLPTASSSSFSSRWSHTTPGGLQQGDPPYRLIEATESTEDAQGAGLAPPQRLFQSRPDATFSTGVPPGPSQNSRNPFHQDQSPPLFDITHQKQLHEHRPPTCAMPLAEMRGLKHDDSARSGIQSQDYLQAPAHNHNYQYYSSTSNFRPPNIAHCGAGDIPVTESGYPGYARHFEARRYHKTSSGGHAEVPRGSEGGVMWRVRGHSFADGVDCDFPPSSSGRADVQWQEQHGKDKRESSNHPTPDTSTHNTITSQGSDDALPWFKTIASGRVQKHLMRFVNNFISQQDLEDELGLYMADIFYETETGPTMMALYDKLERRVSERCPGHLTTFREEALQSLHQLMQACEEREEQQEQGRKALKSSGQRGKPVRNAAKRLGKSRTEGRKLGAMIAHYRSQCPVGNTGYATGKDDAKDVSDFAQYGPGGLCQENLQPQLRKADTLKK 659
            MNPGRGVNDASTYNKARLCNGSEGVTALEFLTVPNVAKTPISSRIAFLKSKGFTETEISVALRLAGEVMCSGHNTSSPATRQPACVDRSIVDVKSEAWGPVARGHAWNSSFSSASARRTFQSHFGDSATTRVGFSDRQAHAHHQNGIFSGSAFPPSQAPRGGLRGCGQDVGEVSDMMAAINVAKSSMQGGAFFRAKSRGASHGLSEHYMPPRHAQGRLPTASSSSFSSRWSHTTPGGLQQGDPPYRLIEATESTEDAQGAGLAPPQRLFQSRPDATFSTGVPPGPSQNSRNPFHQDQSPPLFDITHQKQLHEHRPPTCAMPLAEMRGLKHDDSARSGIQSQDYLQAPAHNHNYQYYSSTSNFRPPNIAHCGAGDIPVTESGYPGYARHFEARRYHKTSSGGHAEVPRGSEGGVMWRVRGHSFADGVDCDFPPSSSGRADVQWQEQHGKDKRESSNHPTPDTSTHNTITSQGSDDALPWFKTIASGRVQKHLMRFVNNFISQQDLEDELGLYMADIFYETETGPTMMALYDKLERRVSERCPGHLTTFREEALQSLHQLMQACEEREEQQEQGRKALKSSGQRGKPVRNAAKRLGKSRTEGRKLGAMIAHYRSQCPVGNTGYATGKDDAKDVSDFAQYGPGGLCQENLQPQLRKADTLKK
Sbjct:    1 MNPGRGVNDASTYNKARLCNGSEGVTALEFLTVPNVAKTPISSRIAFLKSKGFTETEISVALRLAGEVMCSGHNTSSPATRQPACVDRSIVDVKSEAWGPVARGHAWNSSFSSASARRTFQSHFGDSATTRVGFSDRQAHAHHQNGIFSGSAFPPSQAPRGGLRGCGQDVGEVSDMMAAINVAKSSMQGGAFFRAKSRGASHGLSEHYMPPRHAQGRLPTASSSSFSSRWSHTTPGGLQQGDPPYRLIEATESTEDAQGAGLAPPQRLFQSRPDATFSTGVPPGPSQNSRNPFHQDQSPPLFDITHQKQLHEHRPPTCAMPLAEMRGLKHDDSARSGIQSQDYLQAPAHNHNYQYYSSTSNFRPPNIAHCGAGDIPVTESGYPGYARHFEARRYHKTSSGGHAEVPRGSEGGVMWRVRGHSFADGVDCDFPPSSSGRADVQWQEQHGKDKRESSNHPTPDTSTHNTITSQGSDDALPWFKTIASGRVQKHLMRFVNNFISQQDLEDELGLYMADIFYETETGPTMMALYDKLERRVSERCPGHLTTFREEALQSLHQLMQACEEREEQQEQGRKALKSSGQRGKPVRNAAKRLGKSRTEGRKLGAMIAHYRSQCPVGNTGYATGKDDAKDVSDFAQYGPGGLCQENLQPQLRKADTLKK 659
The following BLAST results are available for this feature:
BLAST of EWM25114.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106752|gb|EWM25114.1|0.000e+0100.00Peroxisome membrane anchor protein Pex14p [Nannoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5552rna5552Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications