EWM25149.1, cds5533 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM25149.1 vs. NCBI_GenBank
Match: gi|585106787|gb|EWM25149.1| (hypothetical protein Naga_100016g62 [Nannochloropsis gaditana]) HSP 1 Score: 146.362 bits (368), Expect = 1.472e-44 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0
Query: 1 MIYKGLKWKILAVFFDDILIFSQTAEQHIKDVETTLDRLIDAGLTVFPSEYWPNSHTKAVFSTESVSTSTW 71
MIYKGLKWKILAVFFDDILIFSQTAEQHIKDVETTLDRLIDAGLTVFPSEYWPNSHTKAVFSTESVSTSTW
Sbjct: 1 MIYKGLKWKILAVFFDDILIFSQTAEQHIKDVETTLDRLIDAGLTVFPSEYWPNSHTKAVFSTESVSTSTW 71
BLAST of EWM25149.1 vs. NCBI_GenBank
Match: gi|585109632|gb|EWM27401.1| (pol polyprotein [Nannochloropsis gaditana]) HSP 1 Score: 68.1662 bits (165), Expect = 2.059e-12 Identity = 31/40 (77.50%), Postives = 34/40 (85.00%), Query Frame = 0
Query: 11 LAVFFDDILIFSQTAEQHIKDVETTLDRLIDAGLTVFPSE 50
LAVFFDDIL+FS TAEQHIKD TTL RL DAGLT +PS+
Sbjct: 48 LAVFFDDILVFSSTAEQHIKDAATTLHRLFDAGLTAYPSK 87
BLAST of EWM25149.1 vs. NCBI_GenBank
Match: gi|669326643|gb|KFD66852.1| (hypothetical protein M514_20996 [Trichuris suis]) HSP 1 Score: 53.9138 bits (128), Expect = 8.459e-7 Identity = 23/50 (46.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query: 1 MIYKGLKWKILAVFFDDILIFSQTAEQHIKDVETTLDRLIDAGLTVFPSE 50
++ GLKW+ V+ DD++IFS+T E+HIK + L RL AGL + PS+
Sbjct: 117 LVLAGLKWECCLVYLDDVIIFSRTFEEHIKRLAQVLQRLRGAGLKISPSK 166 The following BLAST results are available for this feature:
BLAST of EWM25149.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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