EWM25136.1, cds5521 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25136.1 vs. NCBI_GenBank
Match: gi|585106774|gb|EWM25136.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 781.171 bits (2016), Expect = 0.000e+0 Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 0
Query: 1 MAPNDTKTCSFHFLNGWHPASFRKQDNALLYEMTSPPAFLRAPAARTMASGGVGSKEKTVKPLGWIWFTGIVLGIAACLPYVVEFMCSKAYATHRHGVVLVTDATSPVGKATCLALMEDGYAVYGGVRSASDERVVTELDSRKLLPVVLDMQNPGTVEAAVAKVKSELQGRPFTALVNTIDAGGAISPIESQDLSSLKRLFDINTFGTLAVVQAFLPLIREHGSRLVLMSSLCAHLTSPLFGGLCASKAALESLADALRRELAHYRISVSSIEPAVAFPEMPEGGKDTGAKSAAAVELDSKVYAHLFADDKARALVSPSANGGEGRRSGTAVAEAVAQVVIHAVSSTHPKLRYPAGYIGHLPASVAAFISWGLPGRMQDLLLA 383
MAPNDTKTCSFHFLNGWHPASFRKQDNALLYEMTSPPAFLRAPAARTMASGGVGSKEKTVKPLGWIWFTGIVLGIAACLPYVVEFMCSKAYATHRHGVVLVTDATSPVGKATCLALMEDGYAVYGGVRSASDERVVTELDSRKLLPVVLDMQNPGTVEAAVAKVKSELQGRPFTALVNTIDAGGAISPIESQDLSSLKRLFDINTFGTLAVVQAFLPLIREHGSRLVLMSSLCAHLTSPLFGGLCASKAALESLADALRRELAHYRISVSSIEPAVAFPEMPEGGKDTGAKSAAAVELDSKVYAHLFADDKARALVSPSANGGEGRRSGTAVAEAVAQVVIHAVSSTHPKLRYPAGYIGHLPASVAAFISWGLPGRMQDLLLA
Sbjct: 1 MAPNDTKTCSFHFLNGWHPASFRKQDNALLYEMTSPPAFLRAPAARTMASGGVGSKEKTVKPLGWIWFTGIVLGIAACLPYVVEFMCSKAYATHRHGVVLVTDATSPVGKATCLALMEDGYAVYGGVRSASDERVVTELDSRKLLPVVLDMQNPGTVEAAVAKVKSELQGRPFTALVNTIDAGGAISPIESQDLSSLKRLFDINTFGTLAVVQAFLPLIREHGSRLVLMSSLCAHLTSPLFGGLCASKAALESLADALRRELAHYRISVSSIEPAVAFPEMPEGGKDTGAKSAAAVELDSKVYAHLFADDKARALVSPSANGGEGRRSGTAVAEAVAQVVIHAVSSTHPKLRYPAGYIGHLPASVAAFISWGLPGRMQDLLLA 383
BLAST of EWM25136.1 vs. NCBI_GenBank
Match: gi|553192954|ref|XP_005855678.1| (short-chain dehydrogenase reductase sdr, partial [Nannochloropsis gaditana CCMP526] >gi|422293382|gb|EKU20682.1| short-chain dehydrogenase reductase sdr, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 691.804 bits (1784), Expect = 0.000e+0 Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = 0
Query: 41 RAPAARTMASGGVGSKEKTVKPLGWIWFTGIVLGIAACLPYVVEFMCSKAYATHRHGVVLVTDATSPVGKATCLALMEDGYAVYGGVRSASDERVVTELDSRKLLPVVLDMQNPGTVEAAVAKVKSELQGRPFTALVNTIDAGGAISPIESQDLSSLKRLFDINTFGTLAVVQAFLPLIREHGSRLVLMSSLCAHLTSPLFGGLCASKAALESLADALRRELAHYRISVSSIEPAVAFPEMPEGGKDTGAKSAAAVELDSKVYAHLFADDKARALVSPSANGGEGRRSGTAVAEAVAQVVIHAVSSTHPKLRYPAGYIGHLPASVAAFISWGLPGRMQDLLLA 383
RAPAARTMASGGVGSKEKTVKPLGWIWFTGIVLGIAACLPYVVEFMCSKAYATHRHGVVLVTDATSPVGKATCLALMEDGYAVYGGVRSASDERVVTELDSRKLLPVVLDMQNPGTVEAAVAKVKSELQGRPFTALVNTIDAGGAISPIESQDLSSLKRLFDINTFGTLAVVQAFLPLIREHGSRLVLMSSLCAHLTSPLFGGLCASKAALESLADALRRELAHYRISVSSIEPAVAFPEMPEGGKDTGAKSAAAVELDSKVYAHLFADDKARALVSPSANGGEGRRSGTAVAEAVAQVVIHAVSSTHPKLRYPAGYIGHLPASVAAFISWGLPGRMQDLLLA
Sbjct: 1 RAPAARTMASGGVGSKEKTVKPLGWIWFTGIVLGIAACLPYVVEFMCSKAYATHRHGVVLVTDATSPVGKATCLALMEDGYAVYGGVRSASDERVVTELDSRKLLPVVLDMQNPGTVEAAVAKVKSELQGRPFTALVNTIDAGGAISPIESQDLSSLKRLFDINTFGTLAVVQAFLPLIREHGSRLVLMSSLCAHLTSPLFGGLCASKAALESLADALRRELAHYRISVSSIEPAVAFPEMPEGGKDTGAKSAAAVELDSKVYAHLFADDKARALVSPSANGGEGRRSGTAVAEAVAQVVIHAVSSTHPKLRYPAGYIGHLPASVAAFISWGLPGRMQDLLLA 343
BLAST of EWM25136.1 vs. NCBI_GenBank
Match: gi|514686056|ref|XP_004990606.1| (oxidoreductase [Salpingoeca rosetta] >gi|326431692|gb|EGD77262.1| oxidoreductase [Salpingoeca rosetta]) HSP 1 Score: 173.711 bits (439), Expect = 1.808e-47 Identity = 111/322 (34.47%), Postives = 170/322 (52.80%), Query Frame = 0
Query: 70 GIVLGIAACLPYVVEFMCSKAYATHRHGVVLVTDATSPVGKATCLALMEDGYAVYGGVRSASDERVVTELDSRKLLPVVLDMQNPGTVEAAVAKVKSELQGRPFTALVNTIDAG-GAISPIESQDLSSLKRLFDINTFGTLAVVQAFLPLIREHGSRLVLMSSLCAHLTSPLFGGLCASKAALESLADALRRELAHYRISVSSIEPAVAFPEMPEGGKDTGAKSAAAVELDSK----VYAHLFADDKARALVSPSANGGEGRRSGTAVA---EAVAQVVIHAVSSTHPKLRYPAGYIGHLPASVAAFISWGLPGRMQDLLLA 383
G+++GI A L Y++ K + H G +L+T ++ +G+ + L + GY VY VR +D + + L+P+V+D+ P + +AV +K G LVN +AG A P+E+ DL ++ +F++N FG ++V QAFLP+IRE+ R+V + SL + P A+K LE L DALRRE+A + +SVS +EP A+ K TG AAA S+ YA FAD + E R G A+A E + + HA++S P+ RY +PA +AA I+W LP R+ D++LA
Sbjct: 7 GVLMGILAVLLYLLFVFPVKYFPVHDSGAILITGTSTGIGRHAAVELAKKGYTVYATVRKQADVDSLKKEGVNTLIPIVMDVTKPDQIASAVDTIKK--GGHKLIGLVN--NAGISARVPLEAHDLDRIRSMFEVNVFGVVSVTQAFLPMIRENKGRIVNVGSLAGFIAMPGSASYSATKFGLEGLNDALRREMAPFGVSVSIVEP--AYVSTAIASKSTG--EAAATRWVSREMQDTYAWFFADFE------------EKRLKGEALADGPEVTTKAITHALTSRTPETRYIVANTYGIPAKIAALINWLLPDRLGDIVLA 308
BLAST of EWM25136.1 vs. NCBI_GenBank
Match: gi|553181318|ref|XP_005853543.1| (3-hydroxybutyrate dehydrogenase [Nannochloropsis gaditana CCMP526] >gi|422295513|gb|EKU22812.1| 3-hydroxybutyrate dehydrogenase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 149.443 bits (376), Expect = 2.914e-38 Identity = 102/330 (30.91%), Postives = 168/330 (50.91%), Query Frame = 0
Query: 66 IWFTGIVLGIAACLPYVVEFMCSKAYATHR-HGVVLVTDATSPVGKATCLALMEDGYAVYGGVRSASD-ERVVTE---LDSRK-LLPVVLDMQNPGTVEAAVAKVKSELQ---GRPFTALVNTIDAGGAISPIESQDLSSLKRLFDINTFGTLAVVQAFLPLIREHGSRLVLMSSLCAHLTSPLFGGLCASKAALESLADALRRELAHYRISVSSIEPAVA----FPEMPEGGKDTGAKSAAAVELDSKVYAHLFADDKARALVSPSANGGEGRRSGTAVAEAVAQVVIHAVSSTHPKLRYPAGYIGHLPASVAAFISWGLPGRMQDLLL 382
I F+ +++ A +PY+++ + Y G V+VT A++ +G +L G+ V+ GVR D E + E L+S++ ++P++LD+ ++ AV V S L GRP LVN GG+ P+E Q + L+ LFD+N FG +A +AFL L+R R++ +SSL +P CASK ALE+ +DALR E+ +SVS +EPA F ++ K+T + V +VY HL + + + E T ++A ++HA+++ HP+ RY + L A V ++ W R++D L+
Sbjct: 4 IRFSALLVAFLASIPYLLDLATRREYPVPPPEGAVVVTGASTGIGAHAAHSLARAGFLVFAGVRKELDGETLKAEAPTLESQENIVPIILDVTKQEQIDKAVQTVSSTLDSLGGRPLVGLVNNAGVGGSNKPVEFQSMDDLRWLFDVNFFGAIATTKAFLALLRASKGRVINISSLAGLTVAPFMTDYCASKWALEAFSDALRVEMGELGVSVSVVEPAYVTSAIFGKIATRVKETADSVSEKV---MEVYGHLVQNP------TYTRRCIEKASPPTVTSDA----ILHALTAKHPQTRYVVANVDGLSAKVIGWMIWMFNDRIKDKLI 320
BLAST of EWM25136.1 vs. NCBI_GenBank
Match: gi|585102158|gb|EWM21817.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 146.747 bits (369), Expect = 2.930e-37 Identity = 101/332 (30.42%), Postives = 164/332 (49.40%), Query Frame = 0
Query: 66 IWFTGIVLGIAACLPYVVEFMCSKAYATHR-HGVVLVTDATSPVGKATCLALMEDGYAVYGGVRSASD-ERVVTE---LDSRK-LLPVVLDMQNPGTVEAAVAKVKSELQ---GRPFTALVNTIDAGGAISPIESQDLSSLKRLFDINTFGTLAVVQAFLPLIREHGSRLVLMSSLCAHLTSPLFGGLCASKAALESLADALRRELAHYRISVSSIEPAVA----FPEMPEGGKDTGAKSAAAVELDSKVYAHLFADDKARALVSPSANGGEGRRSGTAVA--EAVAQVVIHAVSSTHPKLRYPAGYIGHLPASVAAFISWGLPGRMQDLLL 382
I F+ +++ A +PY+++ + Y G V+VT A++ +G +L G+ V+ GVR D E + E L+S++ ++P++LD+ ++ AV V S L GRP LVN GG+ P+E Q + L+ LFD+N FG +A +AFL L+R R++ +SSL +P CASK ALE+ +DALR E+ +SVS +EPA F ++ K+T + V +VY HL N RR + + ++ A+++ HP+ RY + L A V ++ W R++D L+
Sbjct: 4 IRFSALLVAFLASIPYLLDLATRREYPVPPPEGAVVVTGASTGIGAHAAHSLARTGFLVFAGVRKELDGETLKAEAPTLESQENIVPIILDVTKQEQIDKAVQTVSSTLDSLGGRPLVGLVNNAGVGGSNKPVEFQSMDDLRWLFDVNFFGAIATTKAFLALLRASKGRVINISSLAGLTVAPFMTDYCASKWALEAFSDALRVEMGELGVSVSVVEPAYVTSAIFGKIATRMKETADSVSEKV---MEVYGHLV------------QNPTYTRRCIEKASPPTVTSDAILDALTAKHPQTRYVVANVDGLSAKVIGWMIWMFNDRIKDKLI 320
BLAST of EWM25136.1 vs. NCBI_GenBank
Match: gi|1210211457|dbj|BAZ30497.1| (short-chain dehydrogenase/reductase SDR [Cylindrospermum sp. NIES-4074]) HSP 1 Score: 144.436 bits (363), Expect = 8.367e-37 Identity = 102/299 (34.11%), Postives = 156/299 (52.17%), Query Frame = 0
Query: 86 MCSKAYATHRHGVVLVTDATSPVGKATCLALMEDGYAVYGGVRSASDERVVTELDSRKLLPVVLDMQNPGTVEAAVAKVKSELQGRPFTALVNTIDAGGAIS-PIESQDLSSLKRLFDINTFGTLAVVQAFLPLIREHGSRLVLMSSLCAHLTSPLFGGLCASKAALESLADALRRELAHYRISVSSIEPAVAFPEMPEGGKDTGAKSAAAVELDSKVYAHLFADDKARALVSPSANGGEGRRSGTAVAEAVAQVVIHAVSSTHPKLRYPAGYIGHLPASVAAFISWGLPGRMQDLLLA 383
M SK T G V+++ A+S +G+A + L + GY V+ GVRS +D + S +L P+ LD+ N ++ AA ++K+ L T LVN +AG I+ P+E ++ L+ F+IN G +AV QAFLPL+RE R++ MSS ++ P G CASK ALE+L DALR EL + I+V IEP + + + +++ +F D + S NG AE VA+ V HA+++ PK+RY G L A + +++ LP + D L+A
Sbjct: 1 MVSKKSFT---GSVVISGASSGIGEACAIYLDKLGYQVFAGVRSDADGEALKCKTSERLTPIFLDVTNEVSIIAAANRIKATLDSTGLTGLVN--NAGIVIAGPLEFLPVADLREQFEINVIGQIAVTQAFLPLLRESQGRIINMSSDNGKVSIPFLGSYCASKFALEALTDALRIELQPWGIAVCIIEPGSVTTPIWKKSISKADNIWNNLPPEARSLYSVFVDSAHKKANELSNNGFP--------AEVVAKAVAHALTTKRPKIRYVVG----LDAKINIWLAKILPDWILDKLIA 282
BLAST of EWM25136.1 vs. NCBI_GenBank
Match: gi|167525509|ref|XP_001747089.1| (hypothetical protein [Monosiga brevicollis MX1] >gi|163774384|gb|EDQ88013.1| predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 142.124 bits (357), Expect = 1.200e-35 Identity = 103/321 (32.09%), Postives = 167/321 (52.02%), Query Frame = 0
Query: 67 WFTGIVLGIAACLPYVVEFMCSKAYATHRHGVVLVTDATSPVGKATCLALMEDGYAVYGGVRSASDERVVTELDSRKLLPVVLDMQNPGTVEAAVAKVKSELQGRPFTALVNTIDAG-GAISPIESQDLSSLKRLFDINTFGTLAVVQAFLPLIREHGSRLVLMSSLCAHLTSPLFGGLCASKAALESLADALRRELAHYRISVSSIEPAVAFPEMPEGGKDTGAKSA---AAVELDSKVYAHLFA-DDKARALVSPSANGGEGRRSGTAVAEAVAQVVIHAVSSTHPKLRYPAGYIGHLPASVAAFISWGLPGRMQDLLL 382
W +V+ +AA L Y V + Y H GVVLVT A+S +G+ + L + GY VYG VR D + L + L P+++D+ N ++ AV + S+L +P ALVN +AG + +P+E+ D++ ++ F++N FG + QAFLPL+R + R++ + S+ + +K ALE ++D+LRREL +SVS +EPA E+ K +GA+SA A+ E+ +VY H F+ D+ R A+ E ++ A+ S P+ RY +PA + ++W LP R D ++
Sbjct: 5 WSVTVVV-LAAAL-YAVWELPRPTYHVHEQGVVLVTGASSGIGRHAAIELAKLGYEVYGTVRKERDANDIRGLGIKTLHPIIMDVTNSEQIKNAVETI-SKLD-QPLIALVN--NAGISSRAPLEAYDMNRVRNTFEVNIFGLVETTQAFLPLLRANKGRIINIGSVAGLVGMEGSAVYSGTKFALEGISDSLRRELFPLGVSVSLVEPAYVKTEIVH--KSSGAQSAEHWASKEM-LEVYDHFFSVADEKRQRAFEHAD----------TPECTTNAIVDAIRSPQPRTRYVVANTHKIPAWITTGMTWLLPDRAVDAIM 306
BLAST of EWM25136.1 vs. NCBI_GenBank
Match: gi|504942330|ref|WP_015129432.1| (retinol dehydrogenase [Calothrix sp. PCC 7507] >gi|427350899|gb|AFY33623.1| Retinol dehydrogenase [Calothrix sp. PCC 7507]) HSP 1 Score: 140.584 bits (353), Expect = 2.406e-35 Identity = 100/289 (34.60%), Postives = 157/289 (54.33%), Query Frame = 0
Query: 99 VLVTDATSPVGKATCLALMEDGYAVYGGVRSASDERVVTELDSRKLLPVVLDMQNPGTVEAAVAKVKSELQGRPFTALVNTIDAGGAI-SPIESQDLSSLKRLFDINTFGTLAVVQAFLPLIREHGSRLVLMSSLCAHLTSPLFGGLCASKAALESLADALRRELAHYRISVSSIEP-AVAFP--EMPEGGKDTGAKSAAAVELDSKVYAH-LFADDKARALVSPSANGGEGRRSGTAVAEAVAQVVIHAVSSTHPKLRYPAGYIGHLPASVAAFISWGLPGRMQDLLL 382
V++T A++ +G+A L L + G++V+ GVR D + + S +L P+ LD+ +P ++ +AV V + + R LVN +AG A+ P+E ++ + ++N G LAV QAFL L+R+ R+V M S+ +P G ASK ALE L DA+R EL + ISVS IEP A+A P E G D G ++ + LD +Y + + A K+ +++ S A+ VAQ V+HA+++ HPK RY G A + AF+ LP ++ D L+
Sbjct: 9 VVITGASTGIGEACALLLDKLGFSVFAGVRKDVDAEALKQKASPRLRPIFLDVTDPQSIISAVETVNNAVGDRGIFGLVN--NAGIAVPGPLELLPIAEFRHQIEVNVIGQLAVTQAFLGLLRQGQGRIVNMGSISGRSAAPFLGAYNASKFALEGLTDAMRMELRPWGISVSIIEPSAIATPIWEKSLGQADIGQENLSQSNLD--LYGNTMKAVRKSMGIIA----------SKGIPADTVAQSVVHALTAKHPKTRYLVGQ----DAKIGAFLKRFLPDKVYDRLI 279
BLAST of EWM25136.1 vs. NCBI_GenBank
Match: gi|1175915350|gb|OQW36083.1| (short-chain dehydrogenase/reductase [Nitrospira sp. SG-bin1]) HSP 1 Score: 139.813 bits (351), Expect = 5.305e-35 Identity = 101/286 (35.31%), Postives = 152/286 (53.15%), Query Frame = 0
Query: 99 VLVTDATSPVGKATCLALMEDGYAVYGGVRSASDERVVTELDSRKLLPVVLDMQNPGTVEAAVAKVKSELQGRPFTALVNTIDAGGAI-SPIESQDLSSLKRLFDINTFGTLAVVQAFLPLIREHGSRLVLMSSLCAHLTSPLFGGLCASKAALESLADALRRELAHYRISVSSIEP-AVAFPEMPEGGKDTGAKSAAAVELDSKVYAHLFADDKARALVSPSANGGEGRRSGTAVAEAVAQVVIHAVSSTHPKLRYPAGYIGHLPASVAAFISWGLPGRMQDLLL 382
V++T A++ +G A L L G+ V+ GVR D V+ + S +L P++LD+ + T++ + A V + LVN +AG A+ +P+E+ ++ +R ++N G +AV QAFLPLIR+ R+V M S+ T PL G ASK ALE++ DALR E+ + I VS IEP A+A P + D AA+E D + D R +V GE + + A+AVA+VV A++S +PK RY G L A + LP R+ D +L
Sbjct: 9 VVITGASTGIGAACALHLDRLGFTVFAGVRKLDDGVVLQRISSDRLRPIMLDVTDSATIQRSHAIVSERIGTNGLYGLVN--NAGIAVPAPLEAIPITDFRRQLEVNVIGQVAVTQAFLPLIRQARGRIVNMGSIAGLSTMPLMGPYSASKFALEAITDALRLEVQQWGIQVSIIEPGAIATPIWTKSA-DEAVGREAAIETDLRTLYQPIV-DAVRKVV------GEASKRAIS-ADAVAKVVADALTSPYPKTRYLVGKDAKLRALMVKI----LPDRLSDRIL 279
BLAST of EWM25136.1 vs. NCBI_GenBank
Match: gi|553192526|ref|XP_005855590.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >gi|422293482|gb|EKU20782.1| short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 139.043 bits (349), Expect = 1.498e-34 Identity = 84/286 (29.37%), Postives = 147/286 (51.40%), Query Frame = 0
Query: 99 VLVTDATSPVGKATCLALMEDGYAVYGGVRSASDERVVTELDSRKLLPVVLDMQNPGTVEAAVAKVKSEL--QGRPFTALVNTIDAGGAISPIESQDLSSLKRLFDINTFGTLAVVQAFLPLIREHGSRLVLMSSLCAHLTSPLFGGLCASKAALESLADALRRELAHYRISVSSIEPAVAFPEMPEGGKDTGAKSAAAVELDSKVYAHLFADDKARALVSPSANGGEGRRSGTAVAEAVAQVVIHAVSSTHPKLRYPAGYIGHLPASVAAFISWGLPGRMQDLLL 382
V+++ A++ +G + L +D + VY GVR D ++ + L+PV+LD+ + +++ A K+ ++ +G P LVN A S +E D++ +++++D+N +G L + Q FLPL+R R+V +SS+ LT P G C+SK ALESL+D LR ELAHY +SV+ ++P + E + A + KVY H+ + ++++ + + + + A+ +PK R I LPA A ++ LP R+ D +L
Sbjct: 36 VVLSGASTGIGYDAAVHLADD-FVVYAGVRKEKDAEMLRSVGKSTLVPVILDVTSQDSIDEAYVKITADAAERGIPVWGLVNNAGIMTA-STVEHHDVAGMQKIYDVNVWGVLRLTQKFLPLLRAQAGRIVQISSIAGFLTIPRASGYCSSKHALESLSDGLRLELAHYNVSVTVVQPGAVRSAIFEKSQSASQAKLAEDPRELKVYGHMIKEGSTDSIMAKADT-----------PDCTTKAIRQALMDRYPKTREVVANIDGLPAIFAHYMKHMLPDRVLDKML 308 The following BLAST results are available for this feature:
BLAST of EWM25136.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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