EWM25100.1, cds5514 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25100.1 vs. NCBI_GenBank
Match: gi|585106738|gb|EWM25100.1| (mitochondrial substrate carrier family protein [Nannochloropsis gaditana]) HSP 1 Score: 520.776 bits (1340), Expect = 0.000e+0 Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0 Query: 1 MQAAAAGQAGGTVLASGVAKMSALELLRSTIKHEGVLALYRGASSRVLGSALGNSVLFGANGAFLQAFQANTAQPLSGAFVLASAFTGVAEAAIWTPMDLLKTRCQVEYGKKVDVTPLRVARQLFQDRGVRALYAGGGPTLLREIVGNAIYFTVYQVIKQALMQFRGLREGDAATFVVAGGCAGTAYWFSIFPLDTVKSIVQAQEAHITGMQVARDLYAKGGVAAFYKGVGPAMLRAFPACAATWTTFEYSLMALKRLE 259 MQAAAAGQAGGTVLASGVAKMSALELLRSTIKHEGVLALYRGASSRVLGSALGNSVLFGANGAFLQAFQANTAQPLSGAFVLASAFTGVAEAAIWTPMDLLKTRCQVEYGKKVDVTPLRVARQLFQDRGVRALYAGGGPTLLREIVGNAIYFTVYQVIKQALMQFRGLREGDAATFVVAGGCAGTAYWFSIFPLDTVKSIVQAQEAHITGMQVARDLYAKGGVAAFYKGVGPAMLRAFPACAATWTTFEYSLMALKRLE Sbjct: 1 MQAAAAGQAGGTVLASGVAKMSALELLRSTIKHEGVLALYRGASSRVLGSALGNSVLFGANGAFLQAFQANTAQPLSGAFVLASAFTGVAEAAIWTPMDLLKTRCQVEYGKKVDVTPLRVARQLFQDRGVRALYAGGGPTLLREIVGNAIYFTVYQVIKQALMQFRGLREGDAATFVVAGGCAGTAYWFSIFPLDTVKSIVQAQEAHITGMQVARDLYAKGGVAAFYKGVGPAMLRAFPACAATWTTFEYSLMALKRLE 259
BLAST of EWM25100.1 vs. NCBI_GenBank
Match: gi|301121564|ref|XP_002908509.1| (Mitochondrial Carrier (MC) Family [Phytophthora infestans T30-4] >gi|262103540|gb|EEY61592.1| Mitochondrial Carrier (MC) Family [Phytophthora infestans T30-4]) HSP 1 Score: 155.221 bits (391), Expect = 7.415e-42 Identity = 90/250 (36.00%), Postives = 134/250 (53.60%), Query Frame = 0 Query: 24 LELLRSTIKHEGVLALYRGASSRVLGSALGNSVLFGANGAFLQAFQANTAQPLSGAFVLASAFTGVAEAAIWTPMDLLKTRCQVEY-GKKVDVTPLRVARQLFQDRGVRALYAGGGPTLLREIVGNAIYFTVYQVIKQALM-----QFRGLREGDAA-----TFVVAGGCAGTAYWFSIFPLDTVKSIVQA---QEAHITGM-QVARDLYAKGGVAAFYKGVGPAMLRAFPACAATWTTFEYSLMALKRL 258 ++ L+ T++ GV +LYRGAS ++ SA+ S++FG G + + A + A TG E ++TP +++K R Q Y G K ++ + R ++ GV LY G PT RE++GNA YF Y+ K L+ GL A + +GGCAG YW +FP+DTVKS++QA + G+ R LYA+GG FYKG+ P++LRAFPA A T+ FE ++ L +L Sbjct: 86 VDCLKKTLQEGGVSSLYRGASPQIFRSAMSASIMFGLMGQYRYFYSKTLFDNPDYALIAAGVSTGFTEGMLYTPFEIIKVRMQTLYGGTKTRISNWQCVRDVYSRNGVGGLYRGFWPTAGREMLGNAAYFMAYETTKDLLLNRFVHNVPGLSPEAANLRTYQSIAFSGGCAGFMYWLVVFPVDTVKSVLQADRLDKPRFNGITDCCRQLYAEGGPTRFYKGITPSLLRAFPANAVTFVAFEKTMSFLNQL 335
BLAST of EWM25100.1 vs. NCBI_GenBank
Match: gi|567999278|gb|ETL49320.1| (hypothetical protein L916_01170 [Phytophthora parasitica]) HSP 1 Score: 154.066 bits (388), Expect = 1.776e-41 Identity = 88/252 (34.92%), Postives = 135/252 (53.57%), Query Frame = 0 Query: 24 LELLRSTIKHEGVLALYRGASSRVLGSALGNSVLFGANGAFLQAFQANTAQPLSGAFVLASAFTGVAEAAIWTPMDLLKTRCQVEY-GKKVDVTPLRVARQLFQDRGVRALYAGGGPTLLREIVGNAIYFTVYQVIKQALM------------QFRGLREGDAATFVVAGGCAGTAYWFSIFPLDTVKSIVQA---QEAHITGM-QVARDLYAKGGVAAFYKGVGPAMLRAFPACAATWTTFEYSLMALKRL 258 + L+ +++ GV +LYRGAS ++ SA+ S++FG G + ++ A + A TG E ++TP +++K R Q Y G K ++ + R ++ GV LY G PT RE++GNA YF Y+ K L+ + LR + F +GGCAG YW +FP+DTVKS++QA + G+ R LYA+GG FY+G+ P++LRAFPA A T+ FE ++ L +L Sbjct: 86 FDCLKKSLQDGGVASLYRGASPQIFRSAMSASIMFGLMGQYRYSYSKTLFDNPDYALIAAGVSTGFTEGMLYTPFEVIKVRMQTLYGGTKTRISNWQCVRDVYSRNGVGGLYRGFWPTAGREMLGNATYFMAYETTKDLLLNRFVHNVPGLSPEAANLRTYQSIAF--SGGCAGFMYWLVVFPVDTVKSVLQADRLDKPRFNGIADCCRQLYAEGGPTRFYRGITPSLLRAFPANAVTFVAFEKTMSFLNQL 335
BLAST of EWM25100.1 vs. NCBI_GenBank
Match: gi|1214677750|gb|OWY98274.1| (Mitochondrial Carrier (MC) protein [Phytophthora megakarya]) HSP 1 Score: 153.68 bits (387), Expect = 2.929e-41 Identity = 87/252 (34.52%), Postives = 135/252 (53.57%), Query Frame = 0 Query: 24 LELLRSTIKHEGVLALYRGASSRVLGSALGNSVLFGANGAFLQAFQANTAQPLSGAFVLASAFTGVAEAAIWTPMDLLKTRCQVEY-GKKVDVTPLRVARQLFQDRGVRALYAGGGPTLLREIVGNAIYFTVYQVIKQALM------------QFRGLREGDAATFVVAGGCAGTAYWFSIFPLDTVKSIVQA---QEAHITGM-QVARDLYAKGGVAAFYKGVGPAMLRAFPACAATWTTFEYSLMALKRL 258 + L+ +I+ GV +LYRGAS ++ SA+ S++FG G + + A + A TG E ++TP +++K R Q Y G + V+ + R ++ GV LY G PT RE++GNA YF Y+ K ++ + LR + F +GGCAG YW +FP+DTVKS++QA + +G+ R LYA+GG FY+G+ P+++RAFPA A T+ FE ++ L +L Sbjct: 86 FDCLKKSIQEGGVTSLYRGASPQIFRSAMSASIMFGLMGQYRYFYSKTLFDNPDYALIAAGVSTGFTEGMLYTPFEVIKVRMQTLYGGTRTRVSNWQCVRDVYSRNGVVGLYRGFWPTAGREMLGNATYFMAYETTKDLMLNRFVHNVPDLSSESANLRTYQSIAF--SGGCAGFMYWLVVFPVDTVKSVLQADRLDKPQFSGITDCCRKLYAEGGPTRFYRGITPSLIRAFPANAVTFVAFEKTMSYLNQL 335
BLAST of EWM25100.1 vs. NCBI_GenBank
Match: gi|570336949|gb|ETO84897.1| (hypothetical protein F444_01256 [Phytophthora parasitica P1976]) HSP 1 Score: 153.295 bits (386), Expect = 4.579e-41 Identity = 88/252 (34.92%), Postives = 134/252 (53.17%), Query Frame = 0 Query: 24 LELLRSTIKHEGVLALYRGASSRVLGSALGNSVLFGANGAFLQAFQANTAQPLSGAFVLASAFTGVAEAAIWTPMDLLKTRCQVEY-GKKVDVTPLRVARQLFQDRGVRALYAGGGPTLLREIVGNAIYFTVYQVIKQALM------------QFRGLREGDAATFVVAGGCAGTAYWFSIFPLDTVKSIVQA---QEAHITGM-QVARDLYAKGGVAAFYKGVGPAMLRAFPACAATWTTFEYSLMALKRL 258 + L+ +++ GV +LYRGAS ++ SA+ S++FG G + + A + A TG E ++TP +++K R Q Y G K ++ + R ++ GV LY G PT RE++GNA YF Y+ K L+ + LR + F +GGCAG YW +FP+DTVKS++QA + G+ R LYA+GG FY+G+ P++LRAFPA A T+ FE ++ L +L Sbjct: 86 FDCLKKSLQDGGVASLYRGASPQIFRSAMSASIMFGLMGQYRYFYSKTLFDNPDYALIAAGVSTGFTEGMLYTPFEVIKVRMQTLYGGTKTRISNWQCVRDVYSRNGVGGLYRGFWPTAGREMLGNATYFMAYETTKDLLLNRFVHNVPGLSPEAANLRTYQSIAF--SGGCAGFMYWLVVFPIDTVKSVLQADRLDKPRFNGIADCCRQLYAEGGPTRFYRGITPSLLRAFPANAVTFVAFEKTMSFLNQL 335
BLAST of EWM25100.1 vs. NCBI_GenBank
Match: gi|566033236|gb|ETI56147.1| (hypothetical protein F443_01264 [Phytophthora parasitica P1569] >gi|567970925|gb|ETK95942.1| hypothetical protein L915_01185 [Phytophthora parasitica] >gi|568028437|gb|ETM02378.1| hypothetical protein L917_01139 [Phytophthora parasitica] >gi|568059032|gb|ETM55620.1| hypothetical protein L914_01181 [Phytophthora parasitica] >gi|570960977|gb|ETP25956.1| hypothetical protein F441_01234 [Phytophthora parasitica CJ01A1] >gi|570997627|gb|ETP53966.1| hypothetical protein F442_01193 [Phytophthora parasitica P10297]) HSP 1 Score: 152.91 bits (385), Expect = 6.369e-41 Identity = 88/252 (34.92%), Postives = 134/252 (53.17%), Query Frame = 0 Query: 24 LELLRSTIKHEGVLALYRGASSRVLGSALGNSVLFGANGAFLQAFQANTAQPLSGAFVLASAFTGVAEAAIWTPMDLLKTRCQVEY-GKKVDVTPLRVARQLFQDRGVRALYAGGGPTLLREIVGNAIYFTVYQVIKQALM------------QFRGLREGDAATFVVAGGCAGTAYWFSIFPLDTVKSIVQA---QEAHITGM-QVARDLYAKGGVAAFYKGVGPAMLRAFPACAATWTTFEYSLMALKRL 258 + L+ +++ GV +LYRGAS ++ SA+ S++FG G + + A + A TG E ++TP +++K R Q Y G K ++ + R ++ GV LY G PT RE++GNA YF Y+ K L+ + LR + F +GGCAG YW +FP+DTVKS++QA + G+ R LYA+GG FY+G+ P++LRAFPA A T+ FE ++ L +L Sbjct: 86 FDCLKKSLQDGGVASLYRGASPQIFRSAMSASIMFGLMGQYRYFYSKTLFDNPDYALIAAGVSTGFTEGMLYTPFEVIKVRMQTLYGGTKTRISNWQCVRDVYSRNGVGGLYRGFWPTAGREMLGNATYFMAYETTKDLLLNRFVHNVPGLSPEAANLRTYQSIAF--SGGCAGFMYWLVVFPVDTVKSVLQADRLDKPRFNGIADCCRQLYAEGGPTRFYRGITPSLLRAFPANAVTFVAFEKTMSFLNQL 335
BLAST of EWM25100.1 vs. NCBI_GenBank
Match: gi|1013946681|gb|KYR00355.1| (mitochondrial substrate carrier family protein [Dictyostelium lacteum]) HSP 1 Score: 150.984 bits (380), Expect = 1.118e-40 Identity = 85/240 (35.42%), Postives = 136/240 (56.67%), Query Frame = 0 Query: 24 LELLRSTIKHEGVLALYRGASSRVLGSALGNSVLF---GANGAFLQAFQANTAQPLS-GAFVLASAFTGVAEAAIWTPMDLLKTRCQVEYGKKVDVT-PLRVARQLFQDRGVRALYAGGGPTLLREIVGNAIYFTVYQVIKQALMQFRG---LREGDAATFVVAGGCAGTAYWFSIFPLDTVKSIVQAQ-----EAHITG-MQVARDLYAKGGVAAFYKGVGPAMLRAFPACAATWTTFE 249 ++ L+ TI EG LY+G S ++G ++ NSV+F G + +FLQ + NT + LS +A + G A + P+DL K++ QV+YG K + A++++Q RG+R +Y G GPTL+R++ N YF Y++ ++A Q G L E ++ +VAG G +YW +P+D VKS++Q E +G + A+ +Y + G++ FYKG P LRA PA AA + +E Sbjct: 54 MDCLKKTIASEGFWGLYKGVQSPLVGLSIMNSVMFLSYGQSKSFLQELRGNTHKELSVQDLTIAGSMAGFTIAFVEGPVDLFKSQMQVQYGDKKQYNGIMDCAKKIWQTRGIRGIYQGLGPTLIRDVPANGAYFGFYELTRRAFFQNSGKKSLTELESWKVMVAGAVGGVSYWTLTYPIDCVKSLIQTDAINPIERRYSGVIDCAQKIYKQQGISGFYKGFTPCFLRAIPANAACFVLYE 293 HSP 2 Score: 61.2326 bits (147), Expect = 2.630e-7 Identity = 48/176 (27.27%), Postives = 77/176 (43.75%), Query Frame = 0 Query: 81 VLASAFTGVAEAAIWTPMDLLKTRCQVE-YGKKVDVTPLRVARQLFQDRGVRALYAGGGPTLLREIVGNAIYFTVYQVIKQALMQFRG--LREGDAATFVVAGGCAGTAYWFSIFPLDTVKSIVQAQ---EAHITG-MQVARDLYAKGGVAAFYKGVGPAMLRAFPACAATWTTFE 249 +LA + GV + P+D +K R Q + G V + ++ G LY G L+ + N++ F Y K L + RG +E +AG AG F P+D KS +Q Q + G M A+ ++ G+ Y+G+GP ++R PA A + +E Sbjct: 16 ILAGSIGGVGQVLTGHPLDTIKVRLQTQPVGAPVYSGTMDCLKKTIASEGFWGLYKGVQSPLVGLSIMNSVMFLSYGQSKSFLQELRGNTHKELSVQDLTIAGSMAGFTIAFVEGPVDLFKSQMQVQYGDKKQYNGIMDCAKKIWQTRGIRGIYQGLGPTLIRDVPANGAYFGFYE 191
BLAST of EWM25100.1 vs. NCBI_GenBank
Match: gi|970628453|gb|KUF76071.1| (Mitochondrial Carrier (MC) Family [Phytophthora nicotianae]) HSP 1 Score: 151.369 bits (381), Expect = 1.946e-40 Identity = 88/252 (34.92%), Postives = 133/252 (52.78%), Query Frame = 0 Query: 24 LELLRSTIKHEGVLALYRGASSRVLGSALGNSVLFGANGAFLQAFQANTAQPLSGAFVLASAFTGVAEAAIWTPMDLLKTRCQVEY-GKKVDVTPLRVARQLFQDRGVRALYAGGGPTLLREIVGNAIYFTVYQVIKQALM------------QFRGLREGDAATFVVAGGCAGTAYWFSIFPLDTVKSIVQA---QEAHITGM-QVARDLYAKGGVAAFYKGVGPAMLRAFPACAATWTTFEYSLMALKRL 258 + L+ +++ GV +LYRGAS ++ SA+ S++FG G + + A + A TG E ++TP +++K R Q Y G K ++ + R ++ GV LY G PT RE+ GNA YF Y+ K L+ + LR + F +GGCAG YW +FP+DTVKS++QA + G+ R LYA+GG FY+G+ P++LRAFPA A T+ FE ++ L +L Sbjct: 86 FDCLKKSLQDGGVASLYRGASPQIFRSAMSASIMFGLMGQYRYFYSKTLFDNPDYALIAAGVSTGFTEGMLYTPFEVIKVRMQTLYGGTKTRISNWQCVRDVYSRNGVGGLYRGFWPTAGREMWGNATYFMAYETTKDLLLNRFVHNVPGLSPEAANLRTYQSIAF--SGGCAGFMYWLVVFPVDTVKSVLQADRLDKPRFNGIADCCRQLYAEGGPTRFYRGITPSLLRAFPANAVTFVAFEKTMSFLNQL 335
BLAST of EWM25100.1 vs. NCBI_GenBank
Match: gi|675164067|ref|XP_008890918.1| (hypothetical protein PPTG_01071 [Phytophthora parasitica INRA-310] >gi|568110298|gb|ETN24905.1| hypothetical protein PPTG_01071 [Phytophthora parasitica INRA-310]) HSP 1 Score: 151.369 bits (381), Expect = 2.188e-40 Identity = 88/252 (34.92%), Postives = 133/252 (52.78%), Query Frame = 0 Query: 24 LELLRSTIKHEGVLALYRGASSRVLGSALGNSVLFGANGAFLQAFQANTAQPLSGAFVLASAFTGVAEAAIWTPMDLLKTRCQVEY-GKKVDVTPLRVARQLFQDRGVRALYAGGGPTLLREIVGNAIYFTVYQVIKQALM------------QFRGLREGDAATFVVAGGCAGTAYWFSIFPLDTVKSIVQA---QEAHITGM-QVARDLYAKGGVAAFYKGVGPAMLRAFPACAATWTTFEYSLMALKRL 258 + L+ +++ GV +LYRGAS ++ SA+ S++FG G + + A + A TG E ++TP +++K R Q Y G K ++ + R ++ GV LY G PT RE+ GNA YF Y+ K L+ + LR + F +GGCAG YW +FP+DTVKS++QA + G+ R LYA+GG FY+G+ P++LRAFPA A T+ FE ++ L +L Sbjct: 86 FDCLKKSLQDGGVASLYRGASPQIFRSAMSASIMFGLMGQYRYFYSKTLFDNPDYALIAAGVSTGFTEGMLYTPFEVIKVRMQTLYGGTKTRISNWQCVRDVYSRNGVGGLYRGFWPTAGREMWGNATYFMAYETTKDLLLNRFVHNVPGLSPEAANLRTYQSIAF--SGGCAGFMYWLVVFPVDTVKSVLQADRLDKPRFNGIADCCRQLYAEGGPTRFYRGITPSLLRAFPANAVTFVAFEKTMSFLNQL 335
BLAST of EWM25100.1 vs. NCBI_GenBank
Match: gi|1027000143|ref|XP_016607099.1| (hypothetical protein SPPG_06008 [Spizellomyces punctatus DAOM BR117] >gi|907093047|gb|KNC99059.1| hypothetical protein SPPG_06008 [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 146.747 bits (369), Expect = 5.458e-39 Identity = 87/241 (36.10%), Postives = 134/241 (55.60%), Query Frame = 0 Query: 22 SALELLRSTIKHEGVLALYRGASSRVLGSALGNSVLFGANGAFLQAFQANTAQPLSGAFVLASAFTGVAEAAIWTPMDLLKTRCQVEYG-------KKVDVTPLRVARQLFQDRGVRALYAGGGPTLLREIVGNAIYFTVYQVIKQALMQFRGLREGDAATFVVAGGCAGTAYWFSIFPLDTVKSIVQAQEAHITGMQVARDLYAKGGVAAFYKGVGPAMLRAFPACAATWTTFEYSLMAL 255 +A++ L+ T++ EG LALY+G +S +LG + N+VLF ANG F + G +V A A +G A + P++LLK + Q +Y K V L+ RQ +G++ LY G G T++R++ A YF Y+ K L +E + ++AGG AG A W +P D +KS +Q+ +++ MQ AR+++ + G F+KG GP MLRAFPA AAT+ +E + AL Sbjct: 59 NAIDCLKITVREEGALALYKGVTSPLLGVGICNAVLFAANGGFRRWIGGGREDLTVGEYVFAGALSGGVIAWVNCPVELLKVKLQTQYTTGSEQQFKGVLDCGLKTLRQ----QGIQGLYRGIGITIVRDVPSFAAYFGAYEGTKAYLKSHN--KELNPLQLILAGGIAGIAAWLPCYPQDVIKSRIQSDTRNMSTMQYAREIWLQAGWKGFFKGFGPTMLRAFPANAATFLAYESARKAL 293 The following BLAST results are available for this feature:
BLAST of EWM25100.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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