EWM25141.1, cds5513 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25141.1 vs. NCBI_GenBank
Match: gi|585106779|gb|EWM25141.1| (Leucine-rich repeat, ribonuclease inhibitor subtype [Nannochloropsis gaditana]) HSP 1 Score: 916.376 bits (2367), Expect = 0.000e+0 Identity = 457/457 (100.00%), Postives = 457/457 (100.00%), Query Frame = 0
Query: 1 MSLLTAKTKICMATEQFPQCSAGAVAKDSRCQPIPLARLPYPVGWRLVCDFLGTHDIIHLAQTTSEHLNMGFSMIQHLTLRIREEDENLGRKGEGCQSMCTSRAVGSHLARFLSRCVELDSLSCRSLTFSKGECLGDAMRQLRIRCLHSPSPLSRVRVLALSHAGLRVEGLLHLLPSLHLFPALEELLLDGNALGNQGVRAFSRSLRGLGWKDSDGGRVSERFSSMGTGQCLKVLSLASNGIGTAGANELALLLSGAGNGDVRAWNGGDAHPASAVLETSQHQSLSQRHPCALLEALCLDGNVLGPSGTAHLARAFRRGACTQLRQLHLRNNDVRGQGLQDLLSAFASGACPHLTVLSLESNMFGTVGARWLAHALSSGACADLRVLNLNFTFIGEHGMRALAEAFGQGACRRIHTLYLKSACLRRASTLDHLQASTRAGEREGRGERERGYPVLVL 457
MSLLTAKTKICMATEQFPQCSAGAVAKDSRCQPIPLARLPYPVGWRLVCDFLGTHDIIHLAQTTSEHLNMGFSMIQHLTLRIREEDENLGRKGEGCQSMCTSRAVGSHLARFLSRCVELDSLSCRSLTFSKGECLGDAMRQLRIRCLHSPSPLSRVRVLALSHAGLRVEGLLHLLPSLHLFPALEELLLDGNALGNQGVRAFSRSLRGLGWKDSDGGRVSERFSSMGTGQCLKVLSLASNGIGTAGANELALLLSGAGNGDVRAWNGGDAHPASAVLETSQHQSLSQRHPCALLEALCLDGNVLGPSGTAHLARAFRRGACTQLRQLHLRNNDVRGQGLQDLLSAFASGACPHLTVLSLESNMFGTVGARWLAHALSSGACADLRVLNLNFTFIGEHGMRALAEAFGQGACRRIHTLYLKSACLRRASTLDHLQASTRAGEREGRGERERGYPVLVL
Sbjct: 1 MSLLTAKTKICMATEQFPQCSAGAVAKDSRCQPIPLARLPYPVGWRLVCDFLGTHDIIHLAQTTSEHLNMGFSMIQHLTLRIREEDENLGRKGEGCQSMCTSRAVGSHLARFLSRCVELDSLSCRSLTFSKGECLGDAMRQLRIRCLHSPSPLSRVRVLALSHAGLRVEGLLHLLPSLHLFPALEELLLDGNALGNQGVRAFSRSLRGLGWKDSDGGRVSERFSSMGTGQCLKVLSLASNGIGTAGANELALLLSGAGNGDVRAWNGGDAHPASAVLETSQHQSLSQRHPCALLEALCLDGNVLGPSGTAHLARAFRRGACTQLRQLHLRNNDVRGQGLQDLLSAFASGACPHLTVLSLESNMFGTVGARWLAHALSSGACADLRVLNLNFTFIGEHGMRALAEAFGQGACRRIHTLYLKSACLRRASTLDHLQASTRAGEREGRGERERGYPVLVL 457
BLAST of EWM25141.1 vs. NCBI_GenBank
Match: gi|971508361|dbj|GAQ89834.1| (hypothetical protein KFL_005680010, partial [Klebsormidium nitens]) HSP 1 Score: 84.3445 bits (207), Expect = 1.015e-13 Identity = 76/234 (32.48%), Postives = 97/234 (41.45%), Query Frame = 0
Query: 191 GNALGNQGVRAFSRSLRGLGWKDSDGGRVSERFSSMGTGQCLKVLSLASNGIGTAGANELALLLSGAGNGDVRAWNGGDAHPASAVLETSQHQSLSQRHPCALLEALCLDGNVLGPSGTAHLARAF-RRGACTQLRQLHLRNNDVRGQGLQDLLSAFAS-GACPHLTVLSLESNMFGTVGARWLAHAL-SSGACADLRVLNLNFTFIGEHGMRALAEAFG-QGACRRIHTLYLK 420
GN +G++G RA + +L GT L+ L L SN IG GA LA L G C L+ L L N +G G LA A + G C L+ L L + D+ +G Q L +A G C +L L L N G GAR LA AL G C+ L+ LNL + IG G RALA A G +G C + TL L+
Sbjct: 1 GNRIGDEGARALAEAL-----------------GKEGTCHALQTLDLHSNDIGVEGARALATALGKEGT-------------------------------CPNLQTLNLRYNQIGYDGAQALATALGKEGTCPNLQTLDLYSYDIGDEGAQALATALGKEGTCSNLQTLDLSLNQIGDEGARALATALGKEGTCSALQTLNLYYNQIGVEGARALATALGKEGTCPNLQTLDLE 186
BLAST of EWM25141.1 vs. NCBI_GenBank
Match: gi|1166788019|ref|WP_079979327.1| (hypothetical protein, partial [Candidatus Protochlamydia sp. R18]) HSP 1 Score: 82.8037 bits (203), Expect = 4.813e-13 Identity = 84/298 (28.19%), Postives = 132/298 (44.30%), Query Frame = 0
Query: 154 SRVRVLALSHAGLRVEGLLHLLPSLHLFPALEELLLDGNALGNQGVRAFSR------SLRGLGWKDS--DGGRVSERFSSMGTGQCLKVLSLASNGIGTAGANELALLLSGAGNGDVRAWNG-----------GDAHPASAVLET----------SQHQSLSQRHPC-ALLEALCLDGNVLGPSGTAHLARAFRRGACTQLRQLHLRNNDVRGQGLQDLLSAFASGACPHLTVLSLESNMFGTVGARWLAHALSSGACADLRVLNLNFTFIGEHGMRALAEAFGQGACRRIHTLYLKS 421
+ +RVL+L+ + EG+ +L AL+ L L+ N + ++G+ AF++ +LRGL + +G R+ S+ + L L L N IGT G LA L+ V + NG ++ ++ L+T ++ ++ P L AL L+GN +G G A + + T L L+L NN + +G++ L A AS L VLSL N G G A L S L++L LN I + GM+A AE+ + TLYL +
Sbjct: 1065 TTLRVLSLNGNQIGNEGMEAFAKNLPSNTALKILYLNDNQISDEGMEAFAQTLASNTTLRGLSLNGNKINGKRMEAFAESLTSNTALNTLYLDDNQIGTEGMEALAQALASNTTLKVLSLNGNQISNEGMEAFAESLASNTALDTLYLNNNQISDEGMKAFAKNLPSNTTLRALSLNGNQIGNEGMEAFAESL--ASNTALDTLYLDNNQIGTEGMEALAQALASNTT--LRVLSLNRNQIGNEGMEAFAKNLPSNTA--LKILYLNNNQISDKGMKAFAESLASNTA--LDTLYLNN 1354
BLAST of EWM25141.1 vs. NCBI_GenBank
Match: gi|570979923|gb|ETP40753.1| (hypothetical protein F442_11965 [Phytophthora parasitica P10297]) HSP 1 Score: 78.5666 bits (192), Expect = 5.456e-12 Identity = 60/199 (30.15%), Postives = 85/199 (42.71%), Query Frame = 0
Query: 217 GRVSERFSSMGTGQCLKVLSLASNGIGTAGANELAL-LLSGAGNGDVRAWNGGDAHPASAVLETSQHQSLSQRHPCALLEALCLDGNVLGPSGTAHLARAFRRGACTQLRQLHLRNNDVRGQGLQDLLSAFASGACPHLTVLSLESNMFGTVGARWLAHALSSGACADLRVLNLNFTFIGEHGMRALAEAFGQGACRRI 414
G ++ ++ +C V L IG GA ELA LL+GA C + ++ L N++ G A LA F RGAC QL++L LR N++ + LL+A GA P L + L+ N+ G GAR LAHA G LR +++ I +G+ AL F RR
Sbjct: 357 GAAKRQYFTLNLKRCKHVEELRGERIGDRGAKELARSLLTGA---------------------------------CPRVRSIHLGWNLVKYPGIAALADCFTRGACAQLQELDLRCNNIDSKAFATLLTALEKGALPELLDIELQGNILGDEGARALAHAFFKGTLRALRRIDVRQNRIRNNGILALWNVFTAPNFRRF 522 HSP 2 Score: 67.3958 bits (163), Expect = 2.252e-8 Identity = 43/127 (33.86%), Postives = 61/127 (48.03%), Query Frame = 0
Query: 299 LDGNVLGPSGTAHLARAFRRGACTQLRQLHLRNNDVRGQGLQDLLSAFASGACPHLTVLSLESNMFGTVGARWLAHALSSGACADLRVLNLNFTFIGEHGMRALAEAFGQGACRRIHTLYLKSACLR 425
L G +G G LAR+ GAC ++R +HL N V+ G+ L F GAC L L L N + L AL GA +L + L +G+ G RALA AF +G R + + ++ +R
Sbjct: 377 LRGERIGDRGAKELARSLLTGACPRVRSIHLGWNLVKYPGIAALADCFTRGACAQLQELDLRCNNIDSKAFATLLTALEKGALPELLDIELQGNILGDEGARALAHAFFKGTLRALRRIDVRQNRIR 503
BLAST of EWM25141.1 vs. NCBI_GenBank
Match: gi|570323568|gb|ETO71516.1| (hypothetical protein F444_12150 [Phytophthora parasitica P1976]) HSP 1 Score: 78.5666 bits (192), Expect = 5.604e-12 Identity = 60/199 (30.15%), Postives = 85/199 (42.71%), Query Frame = 0
Query: 217 GRVSERFSSMGTGQCLKVLSLASNGIGTAGANELAL-LLSGAGNGDVRAWNGGDAHPASAVLETSQHQSLSQRHPCALLEALCLDGNVLGPSGTAHLARAFRRGACTQLRQLHLRNNDVRGQGLQDLLSAFASGACPHLTVLSLESNMFGTVGARWLAHALSSGACADLRVLNLNFTFIGEHGMRALAEAFGQGACRRI 414
G ++ ++ +C V L IG GA ELA LL+GA C + ++ L N++ G A LA F RGAC QL++L LR N++ + LL+A GA P L + L+ N+ G GAR LAHA G LR +++ I +G+ AL F RR
Sbjct: 357 GAAKRQYFTLNLKRCKHVEELRGERIGDRGAKELARSLLTGA---------------------------------CPRVRSIHLGWNLVKYPGIAALADCFTRGACAQLQELDLRCNNIDSKAFATLLTALEKGALPELLDIELQGNILGDEGARALAHAFFKGTLRALRRIDVRQNRIRNNGILALWNVFTAPNFRRF 522 HSP 2 Score: 67.3958 bits (163), Expect = 2.375e-8 Identity = 43/127 (33.86%), Postives = 61/127 (48.03%), Query Frame = 0
Query: 299 LDGNVLGPSGTAHLARAFRRGACTQLRQLHLRNNDVRGQGLQDLLSAFASGACPHLTVLSLESNMFGTVGARWLAHALSSGACADLRVLNLNFTFIGEHGMRALAEAFGQGACRRIHTLYLKSACLR 425
L G +G G LAR+ GAC ++R +HL N V+ G+ L F GAC L L L N + L AL GA +L + L +G+ G RALA AF +G R + + ++ +R
Sbjct: 377 LRGERIGDRGAKELARSLLTGACPRVRSIHLGWNLVKYPGIAALADCFTRGACAQLQELDLRCNNIDSKAFATLLTALEKGALPELLDIELQGNILGDEGARALAHAFFKGTLRALRRIDVRQNRIR 503
BLAST of EWM25141.1 vs. NCBI_GenBank
Match: gi|551602630|ref|XP_005782869.1| (hypothetical protein EMIHUDRAFT_468406, partial [Emiliania huxleyi CCMP1516] >gi|485635798|gb|EOD30440.1| hypothetical protein EMIHUDRAFT_468406, partial [Emiliania huxleyi CCMP1516]) HSP 1 Score: 79.337 bits (194), Expect = 5.612e-12 Identity = 71/218 (32.57%), Postives = 96/218 (44.04%), Query Frame = 0
Query: 193 ALGNQGVRAFSRSLRGLGWKDSDGGRVSERFSSMGTGQCLKVLSLASNGIGTAGANELALLLSGAGNGDVRAWNGGDAHPASAVLETSQHQSLSQRHPCALLEALCLDGNVLGPSGTAHLARAFRRGACTQLRQLHLRNNDVRGQGLQDLLSAFASGACPHLTVLSLESNMFGTVGARWLAHALSSGACADLRVLNLNFTFIGEHGMRALAEAFGQGA 410
A Q +A GLGW D++ +++E +S G L+ L+L N I G L L G A P LE L LD N +G G LA + GA +L++L+L +N + +G + L +A GA P L LSL+ N G G LA AL GA L +L+L IGE+G ALA AF +GA
Sbjct: 328 AFEEQFGKATKLGYYGLGWGDAEAAQLAEVLAS-GAAPRLETLNLGYNEIDDEGCKALVAALGKEG-----------AAPR--------------------LETLRLDDNQIGEEGCEALAAVLKEGA-PRLKELNLYSNQIGEEGCEALAAALKEGA-PQLEKLSLDDNQIGDEGCEALAAALKEGAAPRLEMLSLTENEIGENGCEALAAAFKEGA 511
BLAST of EWM25141.1 vs. NCBI_GenBank
Match: gi|970640558|gb|KUF83034.1| (hypothetical protein AM587_10002981 [Phytophthora nicotianae]) HSP 1 Score: 77.7962 bits (190), Expect = 8.600e-12 Identity = 60/199 (30.15%), Postives = 84/199 (42.21%), Query Frame = 0
Query: 217 GRVSERFSSMGTGQCLKVLSLASNGIGTAGANELAL-LLSGAGNGDVRAWNGGDAHPASAVLETSQHQSLSQRHPCALLEALCLDGNVLGPSGTAHLARAFRRGACTQLRQLHLRNNDVRGQGLQDLLSAFASGACPHLTVLSLESNMFGTVGARWLAHALSSGACADLRVLNLNFTFIGEHGMRALAEAFGQGACRRI 414
G ++ ++ +C V L IG GA ELA LL+GA C + ++ L N++ G A LA F RGAC QL++L LR N++ + LL+A GA P L + L+ N+ G GAR LAHA G LR +++ I G+ AL F RR
Sbjct: 283 GAAKRQYFTLNLKRCKHVEELRGERIGDRGAKELARSLLTGA---------------------------------CPRVRSIHLGWNLVKYPGIAALADCFTRGACAQLQELDLRCNNIDSKAFATLLTALEKGALPELLDIELQGNILGDEGARALAHAFFKGTLRALRRIDVRQNRIRNDGILALWNVFTAPNFRRF 448 HSP 2 Score: 67.3958 bits (163), Expect = 2.022e-8 Identity = 43/127 (33.86%), Postives = 61/127 (48.03%), Query Frame = 0
Query: 299 LDGNVLGPSGTAHLARAFRRGACTQLRQLHLRNNDVRGQGLQDLLSAFASGACPHLTVLSLESNMFGTVGARWLAHALSSGACADLRVLNLNFTFIGEHGMRALAEAFGQGACRRIHTLYLKSACLR 425
L G +G G LAR+ GAC ++R +HL N V+ G+ L F GAC L L L N + L AL GA +L + L +G+ G RALA AF +G R + + ++ +R
Sbjct: 303 LRGERIGDRGAKELARSLLTGACPRVRSIHLGWNLVKYPGIAALADCFTRGACAQLQELDLRCNNIDSKAFATLLTALEKGALPELLDIELQGNILGDEGARALAHAFFKGTLRALRRIDVRQNRIR 429
BLAST of EWM25141.1 vs. NCBI_GenBank
Match: gi|675198867|ref|XP_008908318.1| (hypothetical protein PPTG_13699 [Phytophthora parasitica INRA-310] >gi|568091528|gb|ETN06349.1| hypothetical protein PPTG_13699 [Phytophthora parasitica INRA-310]) HSP 1 Score: 77.7962 bits (190), Expect = 9.730e-12 Identity = 60/199 (30.15%), Postives = 84/199 (42.21%), Query Frame = 0
Query: 217 GRVSERFSSMGTGQCLKVLSLASNGIGTAGANELAL-LLSGAGNGDVRAWNGGDAHPASAVLETSQHQSLSQRHPCALLEALCLDGNVLGPSGTAHLARAFRRGACTQLRQLHLRNNDVRGQGLQDLLSAFASGACPHLTVLSLESNMFGTVGARWLAHALSSGACADLRVLNLNFTFIGEHGMRALAEAFGQGACRRI 414
G ++ ++ +C V L IG GA ELA LL+GA C + ++ L N++ G A LA F RGAC QL++L LR N++ + LL+A GA P L + L+ N+ G GAR LAHA G LR +++ I G+ AL F RR
Sbjct: 357 GAAKRQYFTLNLKRCKHVEELRGERIGDRGAKELARSLLTGA---------------------------------CPRVRSIHLGWNLVKYPGIAALADCFTRGACAQLQELDLRCNNIDSKAFATLLTALEKGALPELLDIELQGNILGDEGARALAHAFFKGTLRALRRIDVRQNRIRNDGILALWNVFTAPNFRRF 522 HSP 2 Score: 67.3958 bits (163), Expect = 2.233e-8 Identity = 43/127 (33.86%), Postives = 61/127 (48.03%), Query Frame = 0
Query: 299 LDGNVLGPSGTAHLARAFRRGACTQLRQLHLRNNDVRGQGLQDLLSAFASGACPHLTVLSLESNMFGTVGARWLAHALSSGACADLRVLNLNFTFIGEHGMRALAEAFGQGACRRIHTLYLKSACLR 425
L G +G G LAR+ GAC ++R +HL N V+ G+ L F GAC L L L N + L AL GA +L + L +G+ G RALA AF +G R + + ++ +R
Sbjct: 377 LRGERIGDRGAKELARSLLTGACPRVRSIHLGWNLVKYPGIAALADCFTRGACAQLQELDLRCNNIDSKAFATLLTALEKGALPELLDIELQGNILGDEGARALAHAFFKGTLRALRRIDVRQNRIR 503
BLAST of EWM25141.1 vs. NCBI_GenBank
Match: gi|301109441|ref|XP_002903801.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262096804|gb|EEY54856.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 77.411 bits (189), Expect = 1.010e-11 Identity = 60/203 (29.56%), Postives = 86/203 (42.36%), Query Frame = 0
Query: 213 DSDGGRVSERFSSMGTGQCLKVLSLASNGIGTAGANELAL-LLSGAGNGDVRAWNGGDAHPASAVLETSQHQSLSQRHPCALLEALCLDGNVLGPSGTAHLARAFRRGACTQLRQLHLRNNDVRGQGLQDLLSAFASGACPHLTVLSLESNMFGTVGARWLAHALSSGACADLRVLNLNFTFIGEHGMRALAEAFGQGACRRI 414
D G + ++ ++ +C V L IG GA ELA LL+GA C + ++ L N++ G A LA F RGAC QL++L LR N++ + LL+A GA P + + L+ N+ G GAR LAHA G LR +++ I G+ AL F RR
Sbjct: 245 DEQGETSTRQYFTLNLKRCKHVEELRGERIGDRGAKELARSLLTGA---------------------------------CPRVRSIHLGWNLVKYPGIAALADCFTRGACAQLQELDLRCNNIDSKAFATLLTALEKGALPEILDIGLQGNILGDGGARALAHAFFRGTLRGLRRVDIRQNRIRNDGVLALWNVFTAPNFRRF 414 HSP 2 Score: 63.5438 bits (153), Expect = 2.983e-7 Identity = 43/132 (32.58%), Postives = 62/132 (46.97%), Query Frame = 0
Query: 299 LDGNVLGPSGTAHLARAFRRGACTQLRQLHLRNNDVRGQGLQDLLSAFASGACPHLTVLSLESNMFGTVGARWLAHALSSGACADLRVLNLNFTFIGEHGMRALAEAFGQGACRRIHTLYLKSACLRRASTL 430
L G +G G LAR+ GAC ++R +HL N V+ G+ L F GAC L L L N + L AL GA ++ + L +G+ G RALA AF +G R + + ++ +R L
Sbjct: 269 LRGERIGDRGAKELARSLLTGACPRVRSIHLGWNLVKYPGIAALADCFTRGACAQLQELDLRCNNIDSKAFATLLTALEKGALPEILDIGLQGNILGDGGARALAHAFFRGTLRGLRRVDIRQNRIRNDGVL 400
BLAST of EWM25141.1 vs. NCBI_GenBank
Match: gi|551551499|ref|XP_005763196.1| (hypothetical protein EMIHUDRAFT_447308, partial [Emiliania huxleyi CCMP1516] >gi|485612473|gb|EOD10767.1| hypothetical protein EMIHUDRAFT_447308, partial [Emiliania huxleyi CCMP1516]) HSP 1 Score: 74.7146 bits (182), Expect = 1.133e-11 Identity = 50/127 (39.37%), Postives = 65/127 (51.18%), Query Frame = 0
Query: 294 LEALCLDGNVLGPSGTAHLARAFRRGACTQLRQLHLRNNDVRGQGLQDLLSAFA-SGACPHLTVLSLESNMFGTVGARWLAHAL-SSGACADLRVLNLNFTFIGEHGMRALAEAFGQGACRRIHTLY 418
LE L L GN +G G LA A + GA +L L L N + +G + L +A GA P L L+L N G G++ LA AL GA L L L+ IG+ G +ALA A +GA + TLY
Sbjct: 95 LETLVLHGNNIGDEGWKALAAALKEGAAPRLEYLTLNGNKIGDEGSKALAAALGKEGAAPRLEYLALNGNKIGDEGSKALAAALGKEGAAPRLEYLYLHSNKIGDEGCKALAAALKEGAAPSLKTLY 221 The following BLAST results are available for this feature:
BLAST of EWM25141.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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