EWM30122.1, cds551 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM30122.1 vs. NCBI_GenBank
Match: gi|585112771|gb|EWM30122.1| (hypothetical protein Naga_100994g2 [Nannochloropsis gaditana]) HSP 1 Score: 1258.05 bits (3254), Expect = 0.000e+0 Identity = 626/626 (100.00%), Postives = 626/626 (100.00%), Query Frame = 0
Query: 1 MRSWAGQWDFLFLLCIIIVPTSHALVARALSNHPKLATCHHARPRHPSLLPRSLCASATPSAPASFQLSRDDAALDAFRHWLNVKGGIDLSASSLGLRRLAHDDENSPGNADLELFTTRPIEKDQILLAIPPSIVLTSELPSPALRDLAGDAALDDMGRLALRLLHEVSQAGAGSSFQPLLFSHATSSSSFPTLPLDNSGWLPYVRVLPSRNQMDLPFLWEEDGREGGGEDEGEEDSCGPEDSRDSLLALLAPSPLYDDIVALREEMRGELESLRKAVLAHRTLPTSPTILSCLTWENWSWARAVAMSRPYVLKSRPSRSTEEAGRPDFFGDPVLQLLPLLDMANHDDAIHYAVQPGDGVFTSREEVQLVADRDYPEVGAPFLSSYGPLSSATKFYSFGFLDTLSLPPSARSSPPSSLFASRESREDDMPGLVPAQGTALLVLSLDGEGCTDEGNHKSEKRRSSPEMPEAAKEEMTREERRARNVFGRKLDVLSSMGLKAEGQRVEISTRTLLKRGLGSERMAATVRMEGGEEEGEGGREDDGGGMDRLRRYLRLKHMGEEDIDGFLNSPPPRVPLPPPWMKSKSGTVSPLLCLHRRRSRRLLKPCKSSVRGCKMWKTAGNGSVTG 626
MRSWAGQWDFLFLLCIIIVPTSHALVARALSNHPKLATCHHARPRHPSLLPRSLCASATPSAPASFQLSRDDAALDAFRHWLNVKGGIDLSASSLGLRRLAHDDENSPGNADLELFTTRPIEKDQILLAIPPSIVLTSELPSPALRDLAGDAALDDMGRLALRLLHEVSQAGAGSSFQPLLFSHATSSSSFPTLPLDNSGWLPYVRVLPSRNQMDLPFLWEEDGREGGGEDEGEEDSCGPEDSRDSLLALLAPSPLYDDIVALREEMRGELESLRKAVLAHRTLPTSPTILSCLTWENWSWARAVAMSRPYVLKSRPSRSTEEAGRPDFFGDPVLQLLPLLDMANHDDAIHYAVQPGDGVFTSREEVQLVADRDYPEVGAPFLSSYGPLSSATKFYSFGFLDTLSLPPSARSSPPSSLFASRESREDDMPGLVPAQGTALLVLSLDGEGCTDEGNHKSEKRRSSPEMPEAAKEEMTREERRARNVFGRKLDVLSSMGLKAEGQRVEISTRTLLKRGLGSERMAATVRMEGGEEEGEGGREDDGGGMDRLRRYLRLKHMGEEDIDGFLNSPPPRVPLPPPWMKSKSGTVSPLLCLHRRRSRRLLKPCKSSVRGCKMWKTAGNGSVTG
Sbjct: 1 MRSWAGQWDFLFLLCIIIVPTSHALVARALSNHPKLATCHHARPRHPSLLPRSLCASATPSAPASFQLSRDDAALDAFRHWLNVKGGIDLSASSLGLRRLAHDDENSPGNADLELFTTRPIEKDQILLAIPPSIVLTSELPSPALRDLAGDAALDDMGRLALRLLHEVSQAGAGSSFQPLLFSHATSSSSFPTLPLDNSGWLPYVRVLPSRNQMDLPFLWEEDGREGGGEDEGEEDSCGPEDSRDSLLALLAPSPLYDDIVALREEMRGELESLRKAVLAHRTLPTSPTILSCLTWENWSWARAVAMSRPYVLKSRPSRSTEEAGRPDFFGDPVLQLLPLLDMANHDDAIHYAVQPGDGVFTSREEVQLVADRDYPEVGAPFLSSYGPLSSATKFYSFGFLDTLSLPPSARSSPPSSLFASRESREDDMPGLVPAQGTALLVLSLDGEGCTDEGNHKSEKRRSSPEMPEAAKEEMTREERRARNVFGRKLDVLSSMGLKAEGQRVEISTRTLLKRGLGSERMAATVRMEGGEEEGEGGREDDGGGMDRLRRYLRLKHMGEEDIDGFLNSPPPRVPLPPPWMKSKSGTVSPLLCLHRRRSRRLLKPCKSSVRGCKMWKTAGNGSVTG 626
BLAST of EWM30122.1 vs. NCBI_GenBank
Match: gi|470146424|ref|XP_004308826.1| (PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic isoform X1 [Fragaria vesca subsp. vesca]) HSP 1 Score: 78.5666 bits (192), Expect = 8.966e-12 Identity = 96/377 (25.46%), Postives = 145/377 (38.46%), Query Frame = 0
Query: 25 LVARALSNHPKLATCHHARPRHPSLLPRSLCASATPSAPASFQLSRDDAALDAFRHWLNVKGGIDLSAS-SLGLRRLAHDDENSPGNADLELFTTRPIEKDQILLAIPPSIVLTSELPSPALRDLAGDAALDDMGRLALRLLHEVSQAGAGSSFQPLLFSHATSSSSFPTLPLDNSGWLPYVRVLPSRNQMDLPFLWEEDGREGGGEDEGEEDSCGPEDSRDSLLALLAPSPLYDDIVALREEMRGELESLRKAVLAHRTLPTSPTILSCLTWENWSWARAVAMSRPYVLKSRPSRSTEEAGRPDFFGDPVLQLLPLLDMANHDDAIHYAVQPGDGVFTSREEVQLVADRDYPEVGAPFLSSYGPLSSATKFYSFGF 400
L+AR S+H H RP H SL S P + +F DD F WL K G ++S++ S+G E++ G A LF ++ I +L +P S+ L + +P LRDL GD ++ D+ ++A+ +L E + G GS W PY+ LP +M W ED L ++ S LY + + R + E ++R L P + +T + + A A+ SR + K S L+P+ D NHD V D S +++ADR+Y + G L YG S+AT FGF
Sbjct: 3 LIARQFSHHWWR---HRHRP-HVSL-------SHAPLSQLNFHSESDD-----FLPWLQRKSGTEISSALSIG--------ESTHGRA---LFASKTIRAGDCILKVPYSVQLAPDNLAPELRDLIGD-SVGDVAKVAVVILCE-QKMGQGSE------------------------WAPYISRLPRLEEMHSTIFWSEDE-----------------------LEMIRQSSLYQETINQRSFVEKEYSAIRT------VLECFPEMFQSITCKEFMHAYALVTSRAWGSKKGYS------------------LIPVADFLNHDGTSESIVLSDDDKHFS----EVIADRNYTQ-GEQVLIRYGKFSNATLLLDFGF 274
BLAST of EWM30122.1 vs. NCBI_GenBank
Match: gi|298712735|emb|CBJ33334.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 77.411 bits (189), Expect = 3.040e-11 Identity = 41/107 (38.32%), Postives = 56/107 (52.34%), Query Frame = 0
Query: 295 TWENWSWARAVAMSRPYVLKSRPSRSTEEAGRPDFFGDPVLQLLPLLDMANHDDAIHYAVQPGDGVFTSREEVQLVADRDYPEVGAPFLSSYGPLSSATKFYSFGFL 401
T+ W AR SR Y ++ R L+PL+D ANHDD + +AV PGDGVFT +EV VADR Y G ++YG + +A + +SFGF+
Sbjct: 278 TFAEWLHARCTVQSRAYRVRRR------------------YLLIPLVDFANHDDDVAFAVCPGDGVFTGSDEVVFVADRTY-RPGEEVCTTYGDMDNAKRLFSFGFV 365
BLAST of EWM30122.1 vs. NCBI_GenBank
Match: gi|1210520569|dbj|GAX20562.1| ([ribulose-bisphosphate carboxylase]/[fructose-bisphosphate aldolase]-lysine N-methyltransferase [Fistulifera solaris]) HSP 1 Score: 74.7146 bits (182), Expect = 1.671e-10 Identity = 82/304 (26.97%), Postives = 119/304 (39.14%), Query Frame = 0
Query: 113 LELFTTRPIEKDQILLAIPPSI-------VLTSELPSPALRDL---AGDAALDDMGRLALRLLHEVSQAGAGSSFQPLLFSHATSSSSFPTLPLDNSGWLPYVRVLPSRNQM-DLPFLWEEDGREGGGEDEGEEDSCGPEDSRDSLLALLAPSPLYDDIVALREEMRGELESLRKAVL--AHRTLPTSPTILSCLTWENWSWARAVAMSRPYVLKSRPSRSTEEAGRPDFFGDPVLQLLPLLDMANHDDA---IHYAVQPGDGVFTSREEVQLVADRDYPEVGAPFLSSYGPLSSATKFYSFGF 400
L L T I K Q++L++P VLT +D+ + D+ D G LA+ LLH V A + P+ F A +++ LP+ +M P+ W E +E +L + + + +Y + ++M + +K VL + P S C +W + WA AV SR FF D L+ +PLLDM NHDDA I A G + QL+ADR+Y EVG SYGP S+A GF
Sbjct: 22 LGLIATERIAKGQVILSLPCENNNDDTFPVLTVMTAKQVFQDVLPDSFDSWTGDAGLLAMLLLHHV----AHDANTPMPFRTA------------------WLQALPTMEEMTHHPYFWSEADQE--------------------VLQMSSTNKIYQRL----DDMEEDFAWWKKQVLDVNRQRFPESVHDQPCFSWTGFQWAMAVIQSRS------------------FFLDGALRCIPLLDMCNHDDAAEEIQTASAGGFFGSGGNKNAQLIADRNY-EVGQEVFCSYGPKSAADYLLEHGF 260
BLAST of EWM30122.1 vs. NCBI_GenBank
Match: gi|657961501|ref|XP_008372344.1| (PREDICTED: fructose-bisphosphate aldolase-lysine N-methyltransferase, chloroplastic isoform X1 [Malus domestica]) HSP 1 Score: 72.7886 bits (177), Expect = 6.096e-10 Identity = 76/332 (22.89%), Postives = 124/332 (37.35%), Query Frame = 0
Query: 75 LDAFRHWLNVKGGIDLSASSLGLRRLAHDDENSPGNADLELFTTRPIEKDQILLAIPPSIVLTSELPSPALRDLAGDAALDDMGRLALRLLHEVSQAGAGSSFQPLLFSHATSSSSFPTLPLDNSGWLPYVRVLPSRNQMDLPFLWEEDGREGGGEDEGEEDSCGPEDSRDSLLALLAPSPLYDDIVALREEMRGELESLRKAVLAHRTLPTSPTILSCLTWENWSWARAVAMSRPYVLKSRPSRSTEEAGRPDFFGDPVLQLLPLLDMANHDDAIHYAVQPGDGVFTSREEVQLVADRDYPEVGAPFLSSYGPLSSATKFYSFGFLDTLSL 406
D F WL K G D+S S+L + + A+ LF ++ I +L +P S+ L S+ P L+DL D + D +LA +L E ++SGW PY+R LP +M W +D L L+ S +Y + + R ++ E ++R A + L P + +T++++ + SR + G + L+P D NHD V D ++ +++ADR Y G L YG S+AT FGF + ++
Sbjct: 36 FDDFLPWLKRKAGADIS-SALSIGKSAYGT---------SLFASKSITAGDCVLKVPYSVQLASDNLVPELKDLLSD-EVGDAAKLAAVVLLEQRMG-------------------------NDSGWAPYIRRLPCPEEMHCTIFWSDDE-----------------------LELIRQSSVYQETINQRSQIEKEFLAIRMAYF--QALKNFPEMFKSITYKDFMHTYGLVTSRAW-------------GSTKGYS-----LIPFADFLNHDGTSESIVLSDD----DKQFSEVIADRSYAP-GEQVLIRYGKFSNATLLLDFGFTHSYNI 283
BLAST of EWM30122.1 vs. NCBI_GenBank
Match: gi|1210531272|dbj|GAX10373.1| ([ribulose-bisphosphate carboxylase]/[fructose-bisphosphate aldolase]-lysine N-methyltransferase [Fistulifera solaris]) HSP 1 Score: 72.7886 bits (177), Expect = 7.697e-10 Identity = 81/302 (26.82%), Postives = 119/302 (39.40%), Query Frame = 0
Query: 113 LELFTTRPIEKDQILLAIPPSI-----VLTSELPSPALRDL---AGDAALDDMGRLALRLLHEVSQAGAGSSFQPLLFSHATSSSSFPTLPLDNSGWLPYVRVLPSRNQM-DLPFLWEEDGREGGGEDEGEEDSCGPEDSRDSLLALLAPSPLYDDIVALREEMRGELESLRKAVLA--HRTLPTSPTILSCLTWENWSWARAVAMSRPYVLKSRPSRSTEEAGRPDFFGDPVLQLLPLLDMANHDDA---IHYAVQPGDGVFTSREEVQLVADRDYPEVGAPFLSSYGPLSSATKFYSFGF 400
L L T I K Q++L++P VLT RD+ + D+ D G LA+ LLH V+ H ++ S PL + WL + LP+ +M P+ W E +E +L + + + +Y + ++M + +K VL + P + C +W + WA + SR FF D L+ +PLLDM NHDDA I A G + QL+AD +Y EVG SYGP S+A GF
Sbjct: 22 LGLIATEHIAKGQVILSLPCDNDETFPVLTVTAAKQVFRDILPDSFDSWTGDAGLLAMLLLHHVA--------------HDANTPS----PL-RTAWL---QALPTIGEMAHHPYFWSEADQE--------------------ILQMSSTNKIYQRL----DDMEEDFAWWKKQVLDVDRQRFPETVNDQPCFSWTGFQWAMTMIQSRS------------------FFLDGALRCIPLLDMCNHDDAAEEIQTASAGGFFGSGGNKNAQLIADHNY-EVGQEVFCSYGPKSAADYLLEHGF 258
BLAST of EWM30122.1 vs. NCBI_GenBank
Match: gi|764632085|ref|XP_011469716.1| (PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic isoform X2 [Fragaria vesca subsp. vesca]) HSP 1 Score: 68.9366 bits (167), Expect = 1.109e-8 Identity = 96/378 (25.40%), Postives = 143/378 (37.83%), Query Frame = 0
Query: 25 LVARALSNHPKLATCHHARPRHPSLLPRSLCASATPSAPASFQLSRDDAALDAFRHWLNVKGGIDLSAS-SLGLRRLAHDDENSPGNADLELFTTRPIEK-DQILLAIPPSIVLTSELPSPALRDLAGDAALDDMGRLALRLLHEVSQAGAGSSFQPLLFSHATSSSSFPTLPLDNSGWLPYVRVLPSRNQMDLPFLWEEDGREGGGEDEGEEDSCGPEDSRDSLLALLAPSPLYDDIVALREEMRGELESLRKAVLAHRTLPTSPTILSCLTWENWSWARAVAMSRPYVLKSRPSRSTEEAGRPDFFGDPVLQLLPLLDMANHDDAIHYAVQPGDGVFTSREEVQLVADRDYPEVGAPFLSSYGPLSSATKFYSFGF 400
L+AR S+H H RP H SL S P + +F DD F WL K G ++S++ S+G E++ G A LF ++ I D IL + P + +P LRDL GD+ + D+ ++A+ +L E + G GS W PY+ LP +M W ED L ++ S LY + + R + E ++R L P + +T + + A A+ SR + K S L+P+ D NHD V D S +++ADR+Y + G L YG S+AT FGF
Sbjct: 3 LIARQFSHHWWR---HRHRP-HVSL-------SHAPLSQLNFHSESDD-----FLPWLQRKSGTEISSALSIG--------ESTHGRA---LFASKTIRAGDCILKQLAPDNL------APELRDLIGDS-VGDVAKVAVVILCE-QKMGQGSE------------------------WAPYISRLPRLEEMHSTIFWSEDE-----------------------LEMIRQSSLYQETINQRSFVEKEYSAIRT------VLECFPEMFQSITCKEFMHAYALVTSRAWGSKKGYS------------------LIPVADFLNHDGTSESIVLSDDDKHFS----EVIADRNYTQ-GEQVLIRYGKFSNATLLLDFGF 269
BLAST of EWM30122.1 vs. NCBI_GenBank
Match: gi|764632090|ref|XP_011469718.1| (PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic isoform X3 [Fragaria vesca subsp. vesca]) HSP 1 Score: 68.1662 bits (165), Expect = 1.683e-8 Identity = 93/377 (24.67%), Postives = 139/377 (36.87%), Query Frame = 0
Query: 25 LVARALSNHPKLATCHHARPRHPSLLPRSLCASATPSAPASFQLSRDDAALDAFRHWLNVKGGIDLSAS-SLGLRRLAHDDENSPGNADLELFTTRPIEKDQILLAIPPSIVLTSELPSPALRDLAGDAALDDMGRLALRLLHEVSQAGAGSSFQPLLFSHATSSSSFPTLPLDNSGWLPYVRVLPSRNQMDLPFLWEEDGREGGGEDEGEEDSCGPEDSRDSLLALLAPSPLYDDIVALREEMRGELESLRKAVLAHRTLPTSPTILSCLTWENWSWARAVAMSRPYVLKSRPSRSTEEAGRPDFFGDPVLQLLPLLDMANHDDAIHYAVQPGDGVFTSREEVQLVADRDYPEVGAPFLSSYGPLSSATKFYSFGF 400
L+AR S+H H RP H SL S P + +F DD F WL K G ++S++ S+G E++ G A LF ++ I +L +P S+ L + +P LRDL GD ++ D+ ++A+ +L E + G GS W PY+ LP +M W ED L ++ S LY + + R + E ++R L P + +T + + A A+ SR + K S L+P+ D NHD V D D+ + EV L YG S+AT FGF
Sbjct: 3 LIARQFSHHWWR---HRHRP-HVSL-------SHAPLSQLNFHSESDD-----FLPWLQRKSGTEISSALSIG--------ESTHGRA---LFASKTIRAGDCILKVPYSVQLAPDNLAPELRDLIGD-SVGDVAKVAVVILCE-QKMGQGSE------------------------WAPYISRLPRLEEMHSTIFWSEDE-----------------------LEMIRQSSLYQETINQRSFVEKEYSAIRT------VLECFPEMFQSITCKEFMHAYALVTSRAWGSKKGYS------------------LIPVADFLNHDGTSESIVLSDD-------------DKHFSEV----LIRYGKFSNATLLLDFGF 262
BLAST of EWM30122.1 vs. NCBI_GenBank
Match: gi|1139790684|gb|ONI24111.1| (hypothetical protein PRUPE_2G224300 [Prunus persica]) HSP 1 Score: 68.5514 bits (166), Expect = 1.975e-8 Identity = 80/327 (24.46%), Postives = 129/327 (39.45%), Query Frame = 0
Query: 75 LDAFRHWLNVKGGIDLSASSLGLRRLAHDDENSPGNADLELFTTRPIEKDQILLAIPPSIVLTSELPSPALRDLAGDAALDDMGRLALRLLHEVSQAGAGSSFQPLLFSHATSSSSFPTLPLDNSGWLPYVRVLPSRNQMDLPFLWEEDGREGGGEDEGEEDSCGPEDSRDSLLALLAPSPLYDDIVALREEMRGELESLRKAVLAHRTLPTSPTILSCLTWENWSWARAVAMSRPYVLKSRPSRSTEEAGRPDFFGDPVLQLLPLLDMANHDDAIHYAV-QPGDGVFTSREEVQLVADRDYPEVGAPFLSSYGPLSSATKFYSFGF 400
LD F WL K G ++S S L + + A+ LF ++ I +L +P + L + +P L+ L D + D+ +LA+ +L E + G G F L + +S W PY+ LP +M W EGE L ++ S +Y + + R +++ E ++R A L P +T+E++ A A+ SR + G + L+P D +NHD V D +F+ +++ADR+Y G L YG S+AT FGF
Sbjct: 70 LDDFLPWLERKAGAEIS-SVLSIGKSAYGRS---------LFASKAIRAGDCILKVPFNAQLAPDNLNPELKALLSDD-VGDVAKLAIVVLLE-QKMGHGLRF----------------LFMQDSEWAPYISRLPRLEEMHNTIFW----------SEGE-------------LEMIRQSSVYQETINQRSQIQQEFLAIRTA------LKNFPETFESITYEDFMHAYALVTSRAW-------------GSTKGYS-----LIPFADFSNHDGTSESIVLSDEDKLFS-----EVLADRNYTP-GEQVLIRYGKFSNATLLLDFGF 315
BLAST of EWM30122.1 vs. NCBI_GenBank
Match: gi|1173109241|ref|XP_020530495.1| (ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic isoform X2 [Amborella trichopoda]) HSP 1 Score: 65.0846 bits (157), Expect = 1.874e-7 Identity = 77/328 (23.48%), Postives = 119/328 (36.28%), Query Frame = 0
Query: 76 DAFRHWLNVKGGIDLSASSLGLRRLAHDDENSPGNADLELFTTRPIEKDQILLAIPPSIVLTSELPSPALRDLAGDAALDDMGRLALRLLHEVSQAGAGSSFQPLLFSHATSSSSFPTLPLDNSGWLPYVRVLPSRNQMDLPFLWEEDGREGGGEDEGEEDSCGPEDSRDSLLALLAPSPLYDDIVALREEMRGELESLRKAVLAHRTLPTSPTILSCLTWENWSWARAVAMSRPYVLKSRPSRSTEEAGRPDFFGDPVLQLLPLLDMANHDDAIHYAVQPGDGVFTSREEVQL---VADRDYPEVGAPFLSSYGPLSSATKFYSFGF 400
D F WL K GI++S S L + H LF +R I +L IP S+ L S+ P ++ GDAA RLAL +L E + A S W PY+ LP + W +D L ++ SP+Y + + + + + ++++ + L P +T+E + A A+ SR + S+ L L+P D NHD +G S E+ ++ +ADR Y G L SYG S+A+ +GF
Sbjct: 41 DEFLPWLERKAGIEVS-SVLSIGSSTHGRS---------LFASRCIHSGDCILKIPYSVQLRSDNILPEIQRFLGDAA-SSHARLALLILFEENLGQA-------------------------SEWEPYISCLPQMGMLHSTVFWSKDE-----------------------LDMVQCSPVYQETIHHKACIEKDFIAVQQVDIIFWALGHLPHYCRDVTFEKFMHAYALVESRAWGTSSKE-----------------LSLIPFADFLNHDG-------RSEGTLLSNEDKEISEVIADRGYS-AGEEVLISYGKFSNASLLLDYGF 284 The following BLAST results are available for this feature:
BLAST of EWM30122.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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