EWM25169.1, cds5505 (CDS) Nannochloropsis gaditana

Overview
NameEWM25169.1
Unique Namecds5505
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:185702..185789 -
Alignment locationCM002466.1:185339..185565 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25169.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100490g5.5290.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:185702..185789 -
CM002466.1supercontigCM002466.1:185339..185565 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM25169.1 vs. NCBI_GenBank
Match: gi|585106812|gb|EWM25169.1| (hypothetical protein Naga_100490g5 [Nannochloropsis gaditana])

HSP 1 Score: 216.468 bits (550), Expect = 2.341e-71
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0 
Query:    1 MHHYCVFLVLDVIYSLLRREKEKEEMLGDVIPVGSIAAGDKVIILEYCIASDQLRAVDARLPLFQMERKSLLDNRGSQRSWRPPVCMGGERGQSRLTTSPTFVF 104
            MHHYCVFLVLDVIYSLLRREKEKEEMLGDVIPVGSIAAGDKVIILEYCIASDQLRAVDARLPLFQMERKSLLDNRGSQRSWRPPVCMGGERGQSRLTTSPTFVF
Sbjct:    1 MHHYCVFLVLDVIYSLLRREKEKEEMLGDVIPVGSIAAGDKVIILEYCIASDQLRAVDARLPLFQMERKSLLDNRGSQRSWRPPVCMGGERGQSRLTTSPTFVF 104
The following BLAST results are available for this feature:
BLAST of EWM25169.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106812|gb|EWM25169.1|2.341e-71100.00hypothetical protein Naga_100490g5 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5519rna5519Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications