EWM25168.1, cds5504 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25168.1 vs. NCBI_GenBank
Match: gi|585106811|gb|EWM25168.1| (cyanate hydratase [Nannochloropsis gaditana]) HSP 1 Score: 316.235 bits (809), Expect = 3.032e-109 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
Query: 1 MLSGTRRAFSRRSILSPWTRPTSFAPASITPTRAFATGFIEEEKAVHVHNLLKAKKEARLTFDEIAAKTGLTNAYVAQLFYRQAQLKPETVPKMEAAVPTLTGKDLEIMQEVPFRSYDRDVLRTEPLVYRLEEAVLHYGLGIKAIVNEKFGDGT 154
MLSGTRRAFSRRSILSPWTRPTSFAPASITPTRAFATGFIEEEKAVHVHNLLKAKKEARLTFDEIAAKTGLTNAYVAQLFYRQAQLKPETVPKMEAAVPTLTGKDLEIMQEVPFRSYDRDVLRTEPLVYRLEEAVLHYGLGIKAIVNEKFGDGT
Sbjct: 1 MLSGTRRAFSRRSILSPWTRPTSFAPASITPTRAFATGFIEEEKAVHVHNLLKAKKEARLTFDEIAAKTGLTNAYVAQLFYRQAQLKPETVPKMEAAVPTLTGKDLEIMQEVPFRSYDRDVLRTEPLVYRLEEAVLHYGLGIKAIVNEKFGDGT 154
BLAST of EWM25168.1 vs. NCBI_GenBank
Match: gi|242039407|ref|XP_002467098.1| (cyanate hydratase [Sorghum bicolor] >gi|317376154|sp|C5WYI7.1|CYNS_SORBI RecName: Full=Cyanate hydratase; Short=Cyanase; AltName: Full=Cyanate hydrolase; AltName: Full=Cyanate lyase >gi|241920952|gb|EER94096.1| hypothetical protein SORBI_3001G222600 [Sorghum bicolor]) HSP 1 Score: 128.642 bits (322), Expect = 5.061e-35 Identity = 62/111 (55.86%), Postives = 85/111 (76.58%), Query Frame = 0
Query: 43 EKAVHVHNLLKAKKEARLTFDEIAAKTGLTNAYVAQLFYRQAQLKPETVPKMEAAVPTLTGKDLEIMQEVPFRSYDRDVLRTEPLVYRLEEAVLHYGLGIKAIVNEKFGDG 153
E+A V L++ K+E+ TF EIAA+TGLTN YVAQL RQA LK +TVP + AA+PTLT + +++M + PFRSY+ D+++ EP +YRL EAV+H+G IK I+NE+FGDG
Sbjct: 6 ERAAVVRRLMEVKEESGKTFSEIAAETGLTNVYVAQLLRRQAHLKADTVPALRAALPTLTDELVQLMMQPPFRSYNPDIVQ-EPAIYRLNEAVMHFGESIKEIINEEFGDG 115
BLAST of EWM25168.1 vs. NCBI_GenBank
Match: gi|1025225843|ref|XP_016479966.1| (PREDICTED: cyanate hydratase isoform X2 [Nicotiana tabacum]) HSP 1 Score: 127.487 bits (319), Expect = 1.182e-34 Identity = 62/112 (55.36%), Postives = 83/112 (74.11%), Query Frame = 0
Query: 42 EEKAVHVHNLLKAKKEARLTFDEIAAKTGLTNAYVAQLFYRQAQLKPETVPKMEAAVPTLTGKDLEIMQEVPFRSYDRDVLRTEPLVYRLEEAVLHYGLGIKAIVNEKFGDG 153
E KA V +L+ K+++ TF +IA +TGLTN YVAQL RQAQLKPET PK++AA+P L+ + L M E P RSYD ++++ +P VYRL EAV+H+G IK I+NE+FGDG
Sbjct: 2 ENKANMVASLMSVKQKSGKTFSQIAEETGLTNVYVAQLLRRQAQLKPETAPKLKAALPLLSDEQLHDMMEAPLRSYDPNLIQ-DPTVYRLNEAVMHFGESIKEIINEEFGDG 112
BLAST of EWM25168.1 vs. NCBI_GenBank
Match: gi|698460114|ref|XP_009781454.1| (PREDICTED: cyanate hydratase [Nicotiana sylvestris] >gi|1025225839|ref|XP_016479958.1| PREDICTED: cyanate hydratase isoform X1 [Nicotiana tabacum]) HSP 1 Score: 127.487 bits (319), Expect = 1.508e-34 Identity = 62/112 (55.36%), Postives = 83/112 (74.11%), Query Frame = 0
Query: 42 EEKAVHVHNLLKAKKEARLTFDEIAAKTGLTNAYVAQLFYRQAQLKPETVPKMEAAVPTLTGKDLEIMQEVPFRSYDRDVLRTEPLVYRLEEAVLHYGLGIKAIVNEKFGDG 153
E KA V +L+ K+++ TF +IA +TGLTN YVAQL RQAQLKPET PK++AA+P L+ + L M E P RSYD ++++ +P VYRL EAV+H+G IK I+NE+FGDG
Sbjct: 2 ENKANMVASLMSVKQKSGKTFSQIAEETGLTNVYVAQLLRRQAQLKPETAPKLKAALPLLSDEQLHDMMEAPLRSYDPNLIQ-DPTVYRLNEAVMHFGESIKEIINEEFGDG 112
BLAST of EWM25168.1 vs. NCBI_GenBank
Match: gi|460404570|ref|XP_004247754.1| (PREDICTED: cyanate hydratase [Solanum lycopersicum] >gi|970049502|ref|XP_015086264.1| PREDICTED: cyanate hydratase [Solanum pennellii]) HSP 1 Score: 127.487 bits (319), Expect = 1.508e-34 Identity = 62/112 (55.36%), Postives = 83/112 (74.11%), Query Frame = 0
Query: 42 EEKAVHVHNLLKAKKEARLTFDEIAAKTGLTNAYVAQLFYRQAQLKPETVPKMEAAVPTLTGKDLEIMQEVPFRSYDRDVLRTEPLVYRLEEAVLHYGLGIKAIVNEKFGDG 153
E KA V +L+ K+++ TF +IA +TGLTN YVAQL RQAQLKPET PK++AA+P L+ + + M E P RSYD ++++ +P VYRL EAV+H+G IK IVNE+FGDG
Sbjct: 2 ENKANMVASLMSVKQKSGKTFSQIAEETGLTNVYVAQLLRRQAQLKPETAPKLKAALPLLSDQQIHQMMEAPLRSYDPNLIQ-DPTVYRLNEAVMHFGESIKEIVNEEFGDG 112
BLAST of EWM25168.1 vs. NCBI_GenBank
Match: gi|1111033052|ref|XP_019267789.1| (PREDICTED: cyanate hydratase isoform X2 [Nicotiana attenuata] >gi|1102287492|gb|OIT34143.1| cyanate hydratase [Nicotiana attenuata]) HSP 1 Score: 127.487 bits (319), Expect = 1.681e-34 Identity = 61/113 (53.98%), Postives = 84/113 (74.34%), Query Frame = 0
Query: 41 EEEKAVHVHNLLKAKKEARLTFDEIAAKTGLTNAYVAQLFYRQAQLKPETVPKMEAAVPTLTGKDLEIMQEVPFRSYDRDVLRTEPLVYRLEEAVLHYGLGIKAIVNEKFGDG 153
+ KA V +L+ K+++ TF +IA +TGLTN YVAQL RQAQLKPET PK++AA+P+L+ + L M E P RSYD ++++ +P VYRL EAV+H+G IK I+NE+FGDG
Sbjct: 4 QSNKANMVASLMSVKQKSGKTFSQIAEETGLTNVYVAQLLRRQAQLKPETAPKLKAALPSLSDEQLHDMMEAPLRSYDPNLIQ-DPTVYRLNEAVMHFGESIKEIINEEFGDG 115
BLAST of EWM25168.1 vs. NCBI_GenBank
Match: gi|357146576|ref|XP_003574041.1| (PREDICTED: cyanate hydratase [Brachypodium distachyon] >gi|944061450|gb|KQJ97040.1| hypothetical protein BRADI_3g28470 [Brachypodium distachyon]) HSP 1 Score: 127.102 bits (318), Expect = 2.662e-34 Identity = 64/109 (58.72%), Postives = 78/109 (71.56%), Query Frame = 0
Query: 45 AVHVHNLLKAKKEARLTFDEIAAKTGLTNAYVAQLFYRQAQLKPETVPKMEAAVPTLTGKDLEIMQEVPFRSYDRDVLRTEPLVYRLEEAVLHYGLGIKAIVNEKFGDG 153
A V LL AK E +F +IAA+TGLTN YVAQL RQAQLKPET PK+ AAVP LT + +E+M PFRSY +++ EP +YRL EAV+H+G IK I+NE FGDG
Sbjct: 9 AAVVPRLLAAKAECGKSFSDIAAETGLTNVYVAQLLRRQAQLKPETAPKLRAAVPALTDELVELMMRPPFRSYHPEIVH-EPAIYRLNEAVMHFGESIKEIINEDFGDG 116
BLAST of EWM25168.1 vs. NCBI_GenBank
Match: gi|238008610|gb|ACR35340.1| (unknown [Zea mays]) HSP 1 Score: 125.176 bits (313), Expect = 2.727e-34 Identity = 63/111 (56.76%), Postives = 82/111 (73.87%), Query Frame = 0
Query: 43 EKAVHVHNLLKAKKEARLTFDEIAAKTGLTNAYVAQLFYRQAQLKPETVPKMEAAVPTLTGKDLEIMQEVPFRSYDRDVLRTEPLVYRLEEAVLHYGLGIKAIVNEKFGDG 153
EKA V L++AK+ + TF IAA+TGLTN YVAQL RQAQLK +TVP + AA+PTLT +E+M + PFRSY +++ EP +YRL EAV+H+G IK I+NE+FGDG
Sbjct: 6 EKAAVVRRLMEAKEVSGKTFSGIAAETGLTNVYVAQLLRRQAQLKADTVPALRAALPTLTDDLIELMMQPPFRSYHPNIVH-EPAIYRLNEAVMHFGESIKEIINEEFGDG 115
BLAST of EWM25168.1 vs. NCBI_GenBank
Match: gi|1111033050|ref|XP_019267788.1| (PREDICTED: cyanate hydratase isoform X1 [Nicotiana attenuata]) HSP 1 Score: 127.102 bits (318), Expect = 7.360e-34 Identity = 61/113 (53.98%), Postives = 84/113 (74.34%), Query Frame = 0
Query: 41 EEEKAVHVHNLLKAKKEARLTFDEIAAKTGLTNAYVAQLFYRQAQLKPETVPKMEAAVPTLTGKDLEIMQEVPFRSYDRDVLRTEPLVYRLEEAVLHYGLGIKAIVNEKFGDG 153
+ KA V +L+ K+++ TF +IA +TGLTN YVAQL RQAQLKPET PK++AA+P+L+ + L M E P RSYD ++++ +P VYRL EAV+H+G IK I+NE+FGDG
Sbjct: 4 QSNKANMVASLMSVKQKSGKTFSQIAEETGLTNVYVAQLLRRQAQLKPETAPKLKAALPSLSDEQLHDMMEAPLRSYDPNLIQ-DPTVYRLNEAVMHFGESIKEIINEEFGDG 115
BLAST of EWM25168.1 vs. NCBI_GenBank
Match: gi|573959319|ref|XP_006661852.1| (PREDICTED: cyanate hydratase [Oryza brachyantha]) HSP 1 Score: 125.176 bits (313), Expect = 1.103e-33 Identity = 63/112 (56.25%), Postives = 79/112 (70.54%), Query Frame = 0
Query: 42 EEKAVHVHNLLKAKKEARLTFDEIAAKTGLTNAYVAQLFYRQAQLKPETVPKMEAAVPTLTGKDLEIMQEVPFRSYDRDVLRTEPLVYRLEEAVLHYGLGIKAIVNEKFGDG 153
E A V L+ AK E+ +F +IAA+TGLTN YVAQL RQAQLKP+T P + AAVP LT + +M + PFRSY D++ EP VYRL EAV+H+G IK I+NE+FGDG
Sbjct: 4 ERAAAVVRRLMAAKAESGKSFSDIAAETGLTNVYVAQLLRRQAQLKPDTAPALRAAVPGLTDDLVALMMQPPFRSYHPDIIH-EPAVYRLNEAVMHFGESIKEIINEEFGDG 114 The following BLAST results are available for this feature:
BLAST of EWM25168.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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