EWM25171.1, cds5501 (CDS) Nannochloropsis gaditana

Overview
NameEWM25171.1
Unique Namecds5501
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:171826..172539 +

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Properties
Property NameValue
Start range171826
Start range.
Protein idEWM25171.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100578g3.3643.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:171826..172539 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM25171.1 vs. NCBI_GenBank
Match: gi|585106817|gb|EWM25171.1| (hypothetical protein Naga_100578g3, partial [Nannochloropsis gaditana])

HSP 1 Score: 452.21 bits (1162), Expect = 2.117e-160
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0 
Query:    1 SGGHGKGRRVAPGTSLAPRGRGPRVPFRRCFSYLRPRRPPPVMEGGGVATVTSGTPKRKKPPSRDGGKGKALLTGRAGSFSTPRARVALPRAMATALFLPYVSSRPSLALCPLLLFPFSSGCRPRFPFNSPNFNRFLAFRAPSFSSLSPPPLPLPNSLPVSAITGPLRPTSLVGTLNFLLRFLGLLAPEKCPQQSKQLQALVTLTAALVKAGREGEKEAGGGTAGGDSEMSKGNGAT 237
            SGGHGKGRRVAPGTSLAPRGRGPRVPFRRCFSYLRPRRPPPVMEGGGVATVTSGTPKRKKPPSRDGGKGKALLTGRAGSFSTPRARVALPRAMATALFLPYVSSRPSLALCPLLLFPFSSGCRPRFPFNSPNFNRFLAFRAPSFSSLSPPPLPLPNSLPVSAITGPLRPTSLVGTLNFLLRFLGLLAPEKCPQQSKQLQALVTLTAALVKAGREGEKEAGGGTAGGDSEMSKGNGAT
Sbjct:    1 SGGHGKGRRVAPGTSLAPRGRGPRVPFRRCFSYLRPRRPPPVMEGGGVATVTSGTPKRKKPPSRDGGKGKALLTGRAGSFSTPRARVALPRAMATALFLPYVSSRPSLALCPLLLFPFSSGCRPRFPFNSPNFNRFLAFRAPSFSSLSPPPLPLPNSLPVSAITGPLRPTSLVGTLNFLLRFLGLLAPEKCPQQSKQLQALVTLTAALVKAGREGEKEAGGGTAGGDSEMSKGNGAT 237
The following BLAST results are available for this feature:
BLAST of EWM25171.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106817|gb|EWM25171.1|2.117e-160100.00hypothetical protein Naga_100578g3, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5515rna5515Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications