EWM25173.1, cds5500 (CDS) Nannochloropsis gaditana

Overview
NameEWM25173.1
Unique Namecds5500
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:170825..170916 +
Alignment locationCM002466.1:171118..171226 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25173.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101987g1.8727.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:170825..170916 +
CM002466.1supercontigCM002466.1:171118..171226 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM25173.1 vs. NCBI_GenBank
Match: gi|585106821|gb|EWM25173.1| (hypothetical protein Naga_101987g1 [Nannochloropsis gaditana])

HSP 1 Score: 132.109 bits (331), Expect = 3.957e-39
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 
Query:    1 MRRRKRGSRGRRDDDLSFFEVSINWGEGRVNRSTPPPRRWTFPVTGSGHSTFSSSSVAATTCWPRI 66
            MRRRKRGSRGRRDDDLSFFEVSINWGEGRVNRSTPPPRRWTFPVTGSGHSTFSSSSVAATTCWPRI
Sbjct:    1 MRRRKRGSRGRRDDDLSFFEVSINWGEGRVNRSTPPPRRWTFPVTGSGHSTFSSSSVAATTCWPRI 66
The following BLAST results are available for this feature:
BLAST of EWM25173.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106821|gb|EWM25173.1|3.957e-39100.00hypothetical protein Naga_101987g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5514rna5514Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications