EWM25177.1, cds5495 (CDS) Nannochloropsis gaditana

Overview
NameEWM25177.1
Unique Namecds5495
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:151618..152235 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25177.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100801g1.5524.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:151618..152235 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO:0035556intracellular signal transduction
Vocabulary: INTERPRO
TermDefinition
IPR011993PH-like_dom
IPR001562Znf_Btk_motif
Homology
BLAST of EWM25177.1 vs. NCBI_GenBank
Match: gi|585106831|gb|EWM25177.1| (hypothetical protein Naga_100801g1 [Nannochloropsis gaditana])

HSP 1 Score: 401.749 bits (1031), Expect = 1.746e-141
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0
Query:    1 MPPVLSRPAPMPSETPGSSMTICLRSRLSLLLMMFPALDVAALDASIPLCFFRLPFHAATTTATPSVSFPFRLLSLTLLTPPSSSSSSFVSTFSPFLFPLALYSTPPSTPPTSSPPALSASTALPSEAYRTCRLCLRPYLPSRNHDTACRYHPSAYIGNERSKFCGTRSGGNERGLARFWDCCGEESVTAPGCQPCPHESYDEGE 205
            MPPVLSRPAPMPSETPGSSMTICLRSRLSLLLMMFPALDVAALDASIPLCFFRLPFHAATTTATPSVSFPFRLLSLTLLTPPSSSSSSFVSTFSPFLFPLALYSTPPSTPPTSSPPALSASTALPSEAYRTCRLCLRPYLPSRNHDTACRYHPSAYIGNERSKFCGTRSGGNERGLARFWDCCGEESVTAPGCQPCPHESYDEGE
Sbjct:    1 MPPVLSRPAPMPSETPGSSMTICLRSRLSLLLMMFPALDVAALDASIPLCFFRLPFHAATTTATPSVSFPFRLLSLTLLTPPSSSSSSFVSTFSPFLFPLALYSTPPSTPPTSSPPALSASTALPSEAYRTCRLCLRPYLPSRNHDTACRYHPSAYIGNERSKFCGTRSGGNERGLARFWDCCGEESVTAPGCQPCPHESYDEGE 205          
BLAST of EWM25177.1 vs. NCBI_GenBank
Match: gi|1040854210|ref|XP_017238338.1| (PREDICTED: uncharacterized protein LOC108211292 [Daucus carota subsp. sativus])

HSP 1 Score: 73.9442 bits (180), Expect = 1.994e-13
Identity = 38/110 (34.55%), Postives = 59/110 (53.64%), Query Frame = 0
Query:   99 PLALYSTPPSTPPTSSPPALSASTALPSEAYRTCRLCLRPYLPSRNHDTACRYHPSAYIGNERSKFCGTRSGG-----NERGLARFWDCCGEESVTAPGCQPCPHESYDE 203
            PL  Y+    +  +++  ++  S+A P+EA RTC+ C   + PS N   +CRYH + + G  + KF    SGG     +   ++++W CCG E    PGC   PH SYD+
Sbjct:   31 PLFRYTNNSDSRNSNTLISIRCSSAKPTEALRTCKNCKAQFDPSLNDPRSCRYHTAHFGGETKRKFESVHSGGTMSTPDAGKISQYWHCCGSEDPFDPGCTAAPHASYDD 140          
BLAST of EWM25177.1 vs. NCBI_GenBank
Match: gi|302831441|ref|XP_002947286.1| (hypothetical protein VOLCADRAFT_120441 [Volvox carteri f. nagariensis] >gi|300267693|gb|EFJ51876.1| hypothetical protein VOLCADRAFT_120441 [Volvox carteri f. nagariensis])

HSP 1 Score: 73.1738 bits (178), Expect = 9.945e-13
Identity = 41/103 (39.81%), Postives = 53/103 (51.46%), Query Frame = 0
Query:  114 SPPALSASTALPSEAYRTCRLCLRPYLPSRNHDTACRYHPSAYIGNERSKFCG--TRSGGNER---------GLARFWDCCGEESVTAPGCQPCPHESYDEGE 205
             P A +A+ A  +  + TCR C + ++  +NH  ACRYH   + G E +K  G   RS   E          GL RFWDCCG E   APGCQ   H ++DE E
Sbjct:   73 DPAASTATPATQTFTWLTCRRCKKRFVAEQNHRGACRYHSEGWTGGELAKAVGFVRRSEAPEHQLAAVMGRTGLLRFWDCCGAEDEDAPGCQVSFHLTFDEEE 175          
BLAST of EWM25177.1 vs. NCBI_GenBank
Match: gi|449445965|ref|XP_004140742.1| (PREDICTED: uncharacterized protein LOC101208221 [Cucumis sativus] >gi|778679751|ref|XP_011651192.1| PREDICTED: uncharacterized protein LOC101208221 [Cucumis sativus] >gi|700202296|gb|KGN57429.1| hypothetical protein Csa_3G185090 [Cucumis sativus])

HSP 1 Score: 70.8626 bits (172), Expect = 3.084e-12
Identity = 45/127 (35.43%), Postives = 61/127 (48.03%), Query Frame = 0
Query:   85 SSSSFVSTFSPFLFPLALYSTPPSTPPTSSPPALSASTALPSEAY---RTCRLCLRPYLPSRNHDTACRYHPSAYIGNERSKFCGTRSGG-----NERGLARFWDCCGEESVTAPGCQPCPHESYDE 203
            SS+ F+S  S FL   +      S   ++SP  L+   +  S      RTCR C   + PS NH  ACR+H S + G  + KF    SGG     +   + ++W CCG E    PGC   PH SYD+
Sbjct:   10 SSAPFISLHSKFLVLRSDALNRTSKLSSNSPKILTIRCSANSNNQLTLRTCRNCKAQFDPSLNHPRACRFHTSHFGGETKRKFESVHSGGTMDTPDSGKVFQYWHCCGSEDPFDPGCTASPHSSYDD 136          
BLAST of EWM25177.1 vs. NCBI_GenBank
Match: gi|971508697|dbj|GAQ89518.1| (hypothetical protein KFL_005310090 [Klebsormidium nitens])

HSP 1 Score: 69.3218 bits (168), Expect = 5.498e-12
Identity = 33/79 (41.77%), Postives = 42/79 (53.16%), Query Frame = 0
Query:  130 RTCRLCLRPYLPSRNHDTACRYHPSAYIGNERSKFCGTRSGG-----NERGLARFWDCCGEESVTAPGCQPCPHESYDE 203
            RTC+ C + Y P  NH  AC+YH + Y G  R KF     GG     +   +  +W CCG +  T PGC+  PH SYDE
Sbjct:   29 RTCKQCKQQYDPESNHPRACKYHTAHYGGETRRKFESVYEGGTLTTADGGKITAYWHCCGNQDPTDPGCEAAPHRSYDE 107          
BLAST of EWM25177.1 vs. NCBI_GenBank
Match: gi|743821144|ref|XP_011021338.1| (PREDICTED: uncharacterized protein LOC105123443 [Populus euphratica])

HSP 1 Score: 69.3218 bits (168), Expect = 1.118e-11
Identity = 40/120 (33.33%), Postives = 55/120 (45.83%), Query Frame = 0
Query:   93 FSPFLFPLALYSTPPSTPPTSSPPALSAS----TALPSEAYRTCRLCLRPYLPSRNHDTACRYHPSAYIGNERSKFCGTRSGG-----NERGLARFWDCCGEESVTAPGCQPCPHESYDE 203
            FSPFL     +S      PT     LS +        +   RTC+ C   + PS NH  ACR+H + + G  + KF    +GG     +   + ++W CCG E    PGC   PH SYD+
Sbjct:   12 FSPFLHQNTTFSLQSYQKPTIESQRLSITHCSINQNSNRTLRTCKNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVYTGGTMNTPDSGQVFQYWHCCGSEDPFDPGCTAAPHSSYDD 131          
BLAST of EWM25177.1 vs. NCBI_GenBank
Match: gi|255583773|ref|XP_002532639.1| (PREDICTED: uncharacterized protein LOC8268626 [Ricinus communis] >gi|223527630|gb|EEF29742.1| conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 69.3218 bits (168), Expect = 1.194e-11
Identity = 46/140 (32.86%), Postives = 67/140 (47.86%), Query Frame = 0
Query:   71 FRLLSLTLLTPPSSSSSSFVSTFSPFLFPLALYSTPPSTPPTSSP--PALSASTALPSEAYRTCRLCLRPYLPSRNHDTACRYHPSAYIGNERSKFCGTRSGGN----ERGLA-RFWDCCGEESVTAPGCQPCPHESYDE 203
            +++ SL+      S ++SF   F  +  P+A+       P T SP  P +  S        RTC+ C   + PS NH  ACR+H + + G  + KF    SGG     + G+  ++W CCG E    PGC   PH SYD+
Sbjct:    8 YKVTSLSTF----SQNASFHRQFH-YQRPIAI-----RIPITGSPKLPIIQCSIDNSKNTLRTCKNCKTQFDPSLNHPLACRFHTAHFGGETKRKFESVYSGGTMDTPDSGIVFQYWHCCGSEDPFDPGCTAAPHSSYDD 137          
BLAST of EWM25177.1 vs. NCBI_GenBank
Match: gi|1130843293|dbj|GAV75820.1| (hypothetical protein CFOL_v3_19296 [Cephalotus follicularis])

HSP 1 Score: 68.5514 bits (166), Expect = 1.930e-11
Identity = 38/111 (34.23%), Postives = 56/111 (50.45%), Query Frame = 0
Query:   99 PLALYSTPPSTPPTSSPPALSASTALPS-EAYRTCRLCLRPYLPSRNHDTACRYHPSAYIGNERSKFCGTRSGG-----NERGLARFWDCCGEESVTAPGCQPCPHESYDE 203
            PL L S   + P   +    S  +A PS + ++TC++C   + PS NH  AC +H + + G  + KF    SGG     +   + ++W CCG E    PGC   PH SYD+
Sbjct:   26 PLILISLSTTNPTRRADFIKSQCSANPSFKTFKTCKICKTQFDPSLNHPRACLFHTAHFGGETKRKFESVFSGGTMSTPDSGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD 136          
BLAST of EWM25177.1 vs. NCBI_GenBank
Match: gi|1035930879|gb|OAY60465.1| (hypothetical protein MANES_01G114800 [Manihot esculenta])

HSP 1 Score: 68.5514 bits (166), Expect = 2.539e-11
Identity = 40/114 (35.09%), Postives = 56/114 (49.12%), Query Frame = 0
Query:   99 PLALYSTPPSTPPTSSP--PALSAS--TALPSEAYRTCRLCLRPYLPSRNHDTACRYHPSAYIGNERSKFCGTRSGG-----NERGLARFWDCCGEESVTAPGCQPCPHESYDE 203
            P  L+  P   P T SP  P +  S   +   +  +TC+ C   + PS NH +ACR+H + + G  + KF    SGG     +   + ++W CCG E    PGC   PH SYDE
Sbjct:   24 PQFLHRRPTLIPSTQSPRLPVIQCSLTNSTGGKTLKTCKNCKTQFDPSLNHPSACRFHTAHFGGETKRKFESVYSGGTMDTPDSGRVFQYWHCCGSEDPFDPGCTAAPHSSYDE 137          
BLAST of EWM25177.1 vs. NCBI_GenBank
Match: gi|729298773|ref|XP_010551991.1| (PREDICTED: uncharacterized protein LOC104822453 [Tarenaya hassleriana])

HSP 1 Score: 68.1662 bits (165), Expect = 2.551e-11
Identity = 36/94 (38.30%), Postives = 49/94 (52.13%), Query Frame = 0
Query:  115 PPALSASTALPSEAYRTCRLCLRPYLPSRNHDTACRYHPSAYIGNERSKFCGTRSGG-----NERGLARFWDCCGEESVTAPGCQPCPHESYDE 203
            P   SA+T+  SE  RTC+ C   + P  NH  ACR+H + + G  + KF    SGG     +   + ++W CCG E    PGC   PH SYD+
Sbjct:   41 PIRCSATTSNGSEGLRTCKNCKTQFDPLLNHPRACRFHTAHFGGETKRKFESVYSGGTMETPDSGKVFQYWHCCGSEDPFDPGCTASPHASYDD 134          
The following BLAST results are available for this feature:
BLAST of EWM25177.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106831|gb|EWM25177.1|1.746e-141100.00hypothetical protein Naga_100801g1 [Nannochloropsi... [more]
gi|1040854210|ref|XP_017238338.1|1.994e-1334.55PREDICTED: uncharacterized protein LOC108211292 [D... [more]
gi|302831441|ref|XP_002947286.1|9.945e-1339.81hypothetical protein VOLCADRAFT_120441 [Volvox car... [more]
gi|449445965|ref|XP_004140742.1|3.084e-1235.43PREDICTED: uncharacterized protein LOC101208221 [C... [more]
gi|971508697|dbj|GAQ89518.1|5.498e-1241.77hypothetical protein KFL_005310090 [Klebsormidium ... [more]
gi|743821144|ref|XP_011021338.1|1.118e-1133.33PREDICTED: uncharacterized protein LOC105123443 [P... [more]
gi|255583773|ref|XP_002532639.1|1.194e-1132.86PREDICTED: uncharacterized protein LOC8268626 [Ric... [more]
gi|1130843293|dbj|GAV75820.1|1.930e-1134.23hypothetical protein CFOL_v3_19296 [Cephalotus fol... [more]
gi|1035930879|gb|OAY60465.1|2.539e-1135.09hypothetical protein MANES_01G114800 [Manihot escu... [more]
gi|729298773|ref|XP_010551991.1|2.551e-1138.30PREDICTED: uncharacterized protein LOC104822453 [T... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5509rna5509Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications