EWM25177.1, cds5495 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25177.1 vs. NCBI_GenBank
Match: gi|585106831|gb|EWM25177.1| (hypothetical protein Naga_100801g1 [Nannochloropsis gaditana]) HSP 1 Score: 401.749 bits (1031), Expect = 1.746e-141 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0
Query: 1 MPPVLSRPAPMPSETPGSSMTICLRSRLSLLLMMFPALDVAALDASIPLCFFRLPFHAATTTATPSVSFPFRLLSLTLLTPPSSSSSSFVSTFSPFLFPLALYSTPPSTPPTSSPPALSASTALPSEAYRTCRLCLRPYLPSRNHDTACRYHPSAYIGNERSKFCGTRSGGNERGLARFWDCCGEESVTAPGCQPCPHESYDEGE 205
MPPVLSRPAPMPSETPGSSMTICLRSRLSLLLMMFPALDVAALDASIPLCFFRLPFHAATTTATPSVSFPFRLLSLTLLTPPSSSSSSFVSTFSPFLFPLALYSTPPSTPPTSSPPALSASTALPSEAYRTCRLCLRPYLPSRNHDTACRYHPSAYIGNERSKFCGTRSGGNERGLARFWDCCGEESVTAPGCQPCPHESYDEGE
Sbjct: 1 MPPVLSRPAPMPSETPGSSMTICLRSRLSLLLMMFPALDVAALDASIPLCFFRLPFHAATTTATPSVSFPFRLLSLTLLTPPSSSSSSFVSTFSPFLFPLALYSTPPSTPPTSSPPALSASTALPSEAYRTCRLCLRPYLPSRNHDTACRYHPSAYIGNERSKFCGTRSGGNERGLARFWDCCGEESVTAPGCQPCPHESYDEGE 205
BLAST of EWM25177.1 vs. NCBI_GenBank
Match: gi|1040854210|ref|XP_017238338.1| (PREDICTED: uncharacterized protein LOC108211292 [Daucus carota subsp. sativus]) HSP 1 Score: 73.9442 bits (180), Expect = 1.994e-13 Identity = 38/110 (34.55%), Postives = 59/110 (53.64%), Query Frame = 0
Query: 99 PLALYSTPPSTPPTSSPPALSASTALPSEAYRTCRLCLRPYLPSRNHDTACRYHPSAYIGNERSKFCGTRSGG-----NERGLARFWDCCGEESVTAPGCQPCPHESYDE 203
PL Y+ + +++ ++ S+A P+EA RTC+ C + PS N +CRYH + + G + KF SGG + ++++W CCG E PGC PH SYD+
Sbjct: 31 PLFRYTNNSDSRNSNTLISIRCSSAKPTEALRTCKNCKAQFDPSLNDPRSCRYHTAHFGGETKRKFESVHSGGTMSTPDAGKISQYWHCCGSEDPFDPGCTAAPHASYDD 140
BLAST of EWM25177.1 vs. NCBI_GenBank
Match: gi|302831441|ref|XP_002947286.1| (hypothetical protein VOLCADRAFT_120441 [Volvox carteri f. nagariensis] >gi|300267693|gb|EFJ51876.1| hypothetical protein VOLCADRAFT_120441 [Volvox carteri f. nagariensis]) HSP 1 Score: 73.1738 bits (178), Expect = 9.945e-13 Identity = 41/103 (39.81%), Postives = 53/103 (51.46%), Query Frame = 0
Query: 114 SPPALSASTALPSEAYRTCRLCLRPYLPSRNHDTACRYHPSAYIGNERSKFCG--TRSGGNER---------GLARFWDCCGEESVTAPGCQPCPHESYDEGE 205
P A +A+ A + + TCR C + ++ +NH ACRYH + G E +K G RS E GL RFWDCCG E APGCQ H ++DE E
Sbjct: 73 DPAASTATPATQTFTWLTCRRCKKRFVAEQNHRGACRYHSEGWTGGELAKAVGFVRRSEAPEHQLAAVMGRTGLLRFWDCCGAEDEDAPGCQVSFHLTFDEEE 175
BLAST of EWM25177.1 vs. NCBI_GenBank
Match: gi|449445965|ref|XP_004140742.1| (PREDICTED: uncharacterized protein LOC101208221 [Cucumis sativus] >gi|778679751|ref|XP_011651192.1| PREDICTED: uncharacterized protein LOC101208221 [Cucumis sativus] >gi|700202296|gb|KGN57429.1| hypothetical protein Csa_3G185090 [Cucumis sativus]) HSP 1 Score: 70.8626 bits (172), Expect = 3.084e-12 Identity = 45/127 (35.43%), Postives = 61/127 (48.03%), Query Frame = 0
Query: 85 SSSSFVSTFSPFLFPLALYSTPPSTPPTSSPPALSASTALPSEAY---RTCRLCLRPYLPSRNHDTACRYHPSAYIGNERSKFCGTRSGG-----NERGLARFWDCCGEESVTAPGCQPCPHESYDE 203
SS+ F+S S FL + S ++SP L+ + S RTCR C + PS NH ACR+H S + G + KF SGG + + ++W CCG E PGC PH SYD+
Sbjct: 10 SSAPFISLHSKFLVLRSDALNRTSKLSSNSPKILTIRCSANSNNQLTLRTCRNCKAQFDPSLNHPRACRFHTSHFGGETKRKFESVHSGGTMDTPDSGKVFQYWHCCGSEDPFDPGCTASPHSSYDD 136
BLAST of EWM25177.1 vs. NCBI_GenBank
Match: gi|971508697|dbj|GAQ89518.1| (hypothetical protein KFL_005310090 [Klebsormidium nitens]) HSP 1 Score: 69.3218 bits (168), Expect = 5.498e-12 Identity = 33/79 (41.77%), Postives = 42/79 (53.16%), Query Frame = 0
Query: 130 RTCRLCLRPYLPSRNHDTACRYHPSAYIGNERSKFCGTRSGG-----NERGLARFWDCCGEESVTAPGCQPCPHESYDE 203
RTC+ C + Y P NH AC+YH + Y G R KF GG + + +W CCG + T PGC+ PH SYDE
Sbjct: 29 RTCKQCKQQYDPESNHPRACKYHTAHYGGETRRKFESVYEGGTLTTADGGKITAYWHCCGNQDPTDPGCEAAPHRSYDE 107
BLAST of EWM25177.1 vs. NCBI_GenBank
Match: gi|743821144|ref|XP_011021338.1| (PREDICTED: uncharacterized protein LOC105123443 [Populus euphratica]) HSP 1 Score: 69.3218 bits (168), Expect = 1.118e-11 Identity = 40/120 (33.33%), Postives = 55/120 (45.83%), Query Frame = 0
Query: 93 FSPFLFPLALYSTPPSTPPTSSPPALSAS----TALPSEAYRTCRLCLRPYLPSRNHDTACRYHPSAYIGNERSKFCGTRSGG-----NERGLARFWDCCGEESVTAPGCQPCPHESYDE 203
FSPFL +S PT LS + + RTC+ C + PS NH ACR+H + + G + KF +GG + + ++W CCG E PGC PH SYD+
Sbjct: 12 FSPFLHQNTTFSLQSYQKPTIESQRLSITHCSINQNSNRTLRTCKNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVYTGGTMNTPDSGQVFQYWHCCGSEDPFDPGCTAAPHSSYDD 131
BLAST of EWM25177.1 vs. NCBI_GenBank
Match: gi|255583773|ref|XP_002532639.1| (PREDICTED: uncharacterized protein LOC8268626 [Ricinus communis] >gi|223527630|gb|EEF29742.1| conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 69.3218 bits (168), Expect = 1.194e-11 Identity = 46/140 (32.86%), Postives = 67/140 (47.86%), Query Frame = 0
Query: 71 FRLLSLTLLTPPSSSSSSFVSTFSPFLFPLALYSTPPSTPPTSSP--PALSASTALPSEAYRTCRLCLRPYLPSRNHDTACRYHPSAYIGNERSKFCGTRSGGN----ERGLA-RFWDCCGEESVTAPGCQPCPHESYDE 203
+++ SL+ S ++SF F + P+A+ P T SP P + S RTC+ C + PS NH ACR+H + + G + KF SGG + G+ ++W CCG E PGC PH SYD+
Sbjct: 8 YKVTSLSTF----SQNASFHRQFH-YQRPIAI-----RIPITGSPKLPIIQCSIDNSKNTLRTCKNCKTQFDPSLNHPLACRFHTAHFGGETKRKFESVYSGGTMDTPDSGIVFQYWHCCGSEDPFDPGCTAAPHSSYDD 137
BLAST of EWM25177.1 vs. NCBI_GenBank
Match: gi|1130843293|dbj|GAV75820.1| (hypothetical protein CFOL_v3_19296 [Cephalotus follicularis]) HSP 1 Score: 68.5514 bits (166), Expect = 1.930e-11 Identity = 38/111 (34.23%), Postives = 56/111 (50.45%), Query Frame = 0
Query: 99 PLALYSTPPSTPPTSSPPALSASTALPS-EAYRTCRLCLRPYLPSRNHDTACRYHPSAYIGNERSKFCGTRSGG-----NERGLARFWDCCGEESVTAPGCQPCPHESYDE 203
PL L S + P + S +A PS + ++TC++C + PS NH AC +H + + G + KF SGG + + ++W CCG E PGC PH SYD+
Sbjct: 26 PLILISLSTTNPTRRADFIKSQCSANPSFKTFKTCKICKTQFDPSLNHPRACLFHTAHFGGETKRKFESVFSGGTMSTPDSGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD 136
BLAST of EWM25177.1 vs. NCBI_GenBank
Match: gi|1035930879|gb|OAY60465.1| (hypothetical protein MANES_01G114800 [Manihot esculenta]) HSP 1 Score: 68.5514 bits (166), Expect = 2.539e-11 Identity = 40/114 (35.09%), Postives = 56/114 (49.12%), Query Frame = 0
Query: 99 PLALYSTPPSTPPTSSP--PALSAS--TALPSEAYRTCRLCLRPYLPSRNHDTACRYHPSAYIGNERSKFCGTRSGG-----NERGLARFWDCCGEESVTAPGCQPCPHESYDE 203
P L+ P P T SP P + S + + +TC+ C + PS NH +ACR+H + + G + KF SGG + + ++W CCG E PGC PH SYDE
Sbjct: 24 PQFLHRRPTLIPSTQSPRLPVIQCSLTNSTGGKTLKTCKNCKTQFDPSLNHPSACRFHTAHFGGETKRKFESVYSGGTMDTPDSGRVFQYWHCCGSEDPFDPGCTAAPHSSYDE 137
BLAST of EWM25177.1 vs. NCBI_GenBank
Match: gi|729298773|ref|XP_010551991.1| (PREDICTED: uncharacterized protein LOC104822453 [Tarenaya hassleriana]) HSP 1 Score: 68.1662 bits (165), Expect = 2.551e-11 Identity = 36/94 (38.30%), Postives = 49/94 (52.13%), Query Frame = 0
Query: 115 PPALSASTALPSEAYRTCRLCLRPYLPSRNHDTACRYHPSAYIGNERSKFCGTRSGG-----NERGLARFWDCCGEESVTAPGCQPCPHESYDE 203
P SA+T+ SE RTC+ C + P NH ACR+H + + G + KF SGG + + ++W CCG E PGC PH SYD+
Sbjct: 41 PIRCSATTSNGSEGLRTCKNCKTQFDPLLNHPRACRFHTAHFGGETKRKFESVYSGGTMETPDSGKVFQYWHCCGSEDPFDPGCTASPHASYDD 134 The following BLAST results are available for this feature:
BLAST of EWM25177.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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